AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0169140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169140 MtrunA17_Chr1g0185801 91.880 1330 53 5 132 1443 67 1359 0.0 2426
Msa0169140 MtrunA17_Chr1g0185801 100.000 67 0 0 1 67 1 67 5.26e-31 133
Msa0169140 MtrunA17_Chr7g0259601 47.960 1299 553 35 132 1378 79 1306 0.0 875
Msa0169140 MtrunA17_Chr7g0259601 52.632 76 29 1 1368 1443 1376 1444 1.11e-18 93.2
Msa0169140 MtrunA17_Chr7g0259601 55.696 79 23 2 1 67 1 79 8.51e-17 87.0
Msa0169140 MtrunA17_Chr1g0164231 45.357 280 122 6 912 1164 1023 1298 3.48e-52 202
Msa0169140 MtrunA17_Chr1g0164231 32.026 306 158 12 1 285 1 277 7.06e-17 87.0
Msa0169140 MtrunA17_Chr4g0038231 43.465 329 150 5 857 1150 730 1057 4.53e-52 201
Msa0169140 MtrunA17_Chr4g0038231 53.731 67 27 1 1 67 1 63 3.28e-14 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0169140 AT3G63070.1 38.295 645 311 20 826 1443 763 1347 1.40e-97 344
Msa0169140 AT3G63070.1 39.013 446 213 19 132 539 67 491 3.64e-39 160
Msa0169140 AT3G63070.1 55.455 110 47 2 1 109 1 109 4.97e-20 97.8
Msa0169140 AT2G48160.1 43.707 437 183 16 775 1173 704 1115 5.31e-79 288
Msa0169140 AT2G48160.1 37.355 431 236 14 132 539 67 486 7.12e-44 175
Msa0169140 AT2G48160.1 80.597 67 13 0 1 67 1 67 4.08e-22 104
Msa0169140 AT2G48160.2 43.707 437 183 16 775 1173 704 1115 6.27e-79 288
Msa0169140 AT2G48160.2 37.355 431 236 14 132 539 67 486 7.99e-44 175
Msa0169140 AT2G48160.2 80.597 67 13 0 1 67 1 67 4.36e-22 104
Msa0169140 AT5G23150.2 46.006 313 132 9 878 1160 726 1031 1.25e-56 216
Msa0169140 AT5G23150.2 58.209 67 24 1 1 67 1 63 1.52e-15 83.2
Msa0169140 AT5G23150.1 46.006 313 132 9 878 1160 726 1031 1.26e-56 216
Msa0169140 AT5G23150.1 58.209 67 24 1 1 67 1 63 1.69e-15 83.2
Msa0169140 AT5G23150.3 46.006 313 132 9 878 1160 726 1031 1.26e-56 216
Msa0169140 AT5G23150.3 58.209 67 24 1 1 67 1 63 1.69e-15 83.2
Msa0169140 AT5G08230.1 43.333 270 119 6 912 1150 827 1093 7.38e-48 188
Msa0169140 AT5G08230.1 52.239 67 28 1 1 67 1 63 8.34e-14 77.4

Find 468 sgRNAs with CRISPR-Local

Find 1161 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAATAAATTATAGAATT+TGG 0.105022 1_4:-52279400 None:intergenic
ATAATATTGCCTTCAATATT+TGG 0.137883 1_4:-52271671 None:intergenic
CCTGGGCTGCATTGGTTAAT+TGG 0.143753 1_4:-52270413 None:intergenic
CTAGTTCTTGCTAAAGTTAA+AGG 0.159531 1_4:+52264504 Msa0169140:CDS
TTGGTTGCCCTCTTCCTATT+TGG 0.161072 1_4:-52270717 None:intergenic
GTTCTCCTGTGCAGCATTTC+CGG 0.173138 1_4:-52277232 None:intergenic
CGGAATTTCTGCAAATGTTC+TGG 0.182568 1_4:-52270806 None:intergenic
ATACCCTCCATTTCTCTTAT+AGG 0.184982 1_4:-52277525 None:intergenic
TTGTTCAGCTCAACTTCTTC+AGG 0.207853 1_4:-52270645 None:intergenic
ACATTGTTTGCCTGGGTATT+TGG 0.208793 1_4:+52279540 Msa0169140:three_prime_UTR
GGAGGTGGTGGTGGAGGTGG+AGG 0.210470 1_4:-52277998 None:intergenic
GGAGGAGGTGGTGGTGGAGG+TGG 0.222064 1_4:-52278001 None:intergenic
CGCTAGCTCTGTCTCTTTGC+TGG 0.238689 1_4:-52267066 None:intergenic
CTTTGTTTAGGAGGTGTTTA+TGG 0.241268 1_4:+52279179 Msa0169140:three_prime_UTR
GGTGGTGGAGGAGGTGGTGG+TGG 0.242831 1_4:-52278007 None:intergenic
GACCAGATAAAGTTTGTTTC+TGG 0.244152 1_4:-52272462 None:intergenic
TACCCTCCATTTCTCTTATA+GGG 0.249484 1_4:-52277524 None:intergenic
GGTGGAGGTGGAGGGGCTAA+TGG 0.262775 1_4:-52277989 None:intergenic
GGCAGGCGACATGGGGAAAT+TGG 0.263763 1_4:+52267121 Msa0169140:CDS
GGTGGTGGTGGAGGAGGTGG+TGG 0.264446 1_4:-52278010 None:intergenic
CACCAGAAACAAACTTTATC+TGG 0.265155 1_4:+52272460 Msa0169140:CDS
ACGCCTTCACCGTGCTTTAG+AGG 0.267616 1_4:+52271175 Msa0169140:CDS
AGGCCTTGATCTTAAAATAA+AGG 0.270326 1_4:+52270668 Msa0169140:CDS
GCATGTCAGGTCCAGGCTTT+TGG 0.272239 1_4:+52279011 Msa0169140:intron
GTACTGATCTAAATTCTATA+AGG 0.273364 1_4:-52279429 None:intergenic
GGTGGAGGAGGTGGTGGTGG+AGG 0.273646 1_4:-52278004 None:intergenic
TGTGCATTACCTCAAGCTTC+TGG 0.274877 1_4:-52279721 None:intergenic
TTAATCTTTCGTGATTATTA+TGG 0.275503 1_4:-52278570 None:intergenic
TGGTTGCCCTCTTCCTATTT+GGG 0.281847 1_4:-52270716 None:intergenic
GGAGGTGGTGGTGGAGGAGG+TGG 0.285218 1_4:-52278013 None:intergenic
ATAGGAGGTGGTGGTGGAGG+AGG 0.285518 1_4:-52278016 None:intergenic
CTGGGTCAAAAGGCTGTTTC+GGG 0.289716 1_4:+52272295 Msa0169140:CDS
TGTTTCAACATCTGACTGTC+TGG 0.290909 1_4:+52272276 Msa0169140:CDS
CACCCGTGATCTGGTATTCT+AGG 0.306923 1_4:-52278799 None:intergenic
TGATTCAGTTTCAAGATTAT+CGG 0.307560 1_4:-52276954 None:intergenic
TTTGAGGCGGATCAATATTA+GGG 0.309291 1_4:-52271790 None:intergenic
TTCTCCTGTGCAGCATTTCC+GGG 0.318601 1_4:-52277231 None:intergenic
TCTTCAAAGGGTGGTCTAAA+TGG 0.319299 1_4:-52278862 None:intergenic
ATGTGTGCTTCCCTATATTC+TGG 0.321948 1_4:-52278304 None:intergenic
TTCAGGGCATTCACTAGTTT+CGG 0.323438 1_4:-52270628 None:intergenic
TTAGAAGGAATAAACGTCTT+AGG 0.328537 1_4:+52270445 Msa0169140:CDS
AAGGCATTGAATTGAGATAT+TGG 0.329040 1_4:-52264298 None:intergenic
GTCATTACATGGAAACATAA+AGG 0.330567 1_4:-52270370 None:intergenic
TCCCTTCAATTAACAATTCC+AGG 0.331779 1_4:-52279482 None:intergenic
CCTGAACTCTGGCTTTGTTT+AGG 0.332375 1_4:+52279167 Msa0169140:three_prime_UTR
ATAATACATACAACAGAAAC+TGG 0.333790 1_4:+52266993 Msa0169140:CDS
GCTATTGACTGTGCAAAGTT+TGG 0.334113 1_4:+52272640 Msa0169140:CDS
GGTGTAACCTTAACTTATTT+AGG 0.336516 1_4:+52279356 Msa0169140:three_prime_UTR
CCATCATGCCCCAGAATATA+GGG 0.339549 1_4:+52278294 Msa0169140:CDS
AGGTGGTGGTGGAGGTGGAG+GGG 0.340651 1_4:-52277996 None:intergenic
TCTGGGTCAAAAGGCTGTTT+CGG 0.341197 1_4:+52272294 Msa0169140:CDS
ATGATAGAGGGCACTCTATA+AGG 0.344824 1_4:+52278407 Msa0169140:CDS
GGAGGTGGAGGGGCTAATGG+TGG 0.356226 1_4:-52277986 None:intergenic
ACATTTCAGTGAATATTTCC+TGG 0.358016 1_4:+52279464 Msa0169140:three_prime_UTR
TCAGAATGTCGATAATTTAC+TGG 0.359124 1_4:-52278370 None:intergenic
TGAAGGAGAAACATTATTCA+TGG 0.362082 1_4:-52271054 None:intergenic
TCGGAATTTGAAGATTTCAT+AGG 0.362435 1_4:-52270108 None:intergenic
TCCATTGTGCTCTGATGTAT+TGG 0.366720 1_4:-52271720 None:intergenic
GGTATGCATGTTGACGAATA+TGG 0.368248 1_4:+52277543 Msa0169140:CDS
CATTATTCATGGTGCCAATC+AGG 0.370668 1_4:-52271043 None:intergenic
CCGCTGCCGCCGCTCGTCAA+TGG 0.370854 1_4:+52264469 Msa0169140:CDS
GGTGGAGGGGCTAATGGTGG+TGG 0.373453 1_4:-52277983 None:intergenic
GGAATTTCTGCAAATGTTCT+GGG 0.379796 1_4:-52270805 None:intergenic
TCTCCCATACATTGTTTGCC+TGG 0.380391 1_4:+52279532 Msa0169140:three_prime_UTR
TCTTGCCAGTTTCTTGTGGC+TGG 0.380776 1_4:-52271478 None:intergenic
AGAAGAAAAGAAACCCAAAT+AGG 0.385245 1_4:+52270703 Msa0169140:CDS
GGCTCAAACATCTAAAGAAT+TGG 0.385594 1_4:-52279604 None:intergenic
AATGAACCTCTGTTTGTAAC+TGG 0.386152 1_4:-52278892 None:intergenic
GGCCTTGATCTTAAAATAAA+GGG 0.387368 1_4:+52270669 Msa0169140:CDS
TACTGATCTAAATTCTATAA+GGG 0.387424 1_4:-52279428 None:intergenic
GACACAACCTAAATAAGTTA+AGG 0.388262 1_4:-52279363 None:intergenic
TAATTTACTGGATGCGGTAC+AGG 0.392503 1_4:-52278358 None:intergenic
ATTCCAATCTTACCGGGATA+AGG 0.393753 1_4:-52278637 None:intergenic
ACCATCATGCCCCAGAATAT+AGG 0.395779 1_4:+52278293 Msa0169140:CDS
CAACCCATGGCTATCAATAT+CGG 0.396646 1_4:-52270127 None:intergenic
AGTTTCTTGTGGCTGGAACC+TGG 0.396716 1_4:-52271471 None:intergenic
CTCCACGAAATGTTGCCTAT+TGG 0.401464 1_4:-52278524 None:intergenic
CCCAGGGTGCATCTGTTAGA+AGG 0.403916 1_4:+52270430 Msa0169140:CDS
CACCTGGGCCGCCAAAAGCC+TGG 0.404703 1_4:-52279022 None:intergenic
GCACGGTGAAGGCGTTTAGA+TGG 0.407287 1_4:-52271167 None:intergenic
TTTCGAGAAGAGTAAGTTAG+TGG 0.409419 1_4:-52270258 None:intergenic
ACATTGCAAATTGACGTGTT+TGG 0.409640 1_4:-52272376 None:intergenic
ATACCCAGGCAAACAATGTA+TGG 0.410169 1_4:-52279536 None:intergenic
ATGGGAGAATACAGTTGAAT+TGG 0.410432 1_4:-52279517 None:intergenic
AGGTTCCAGCCACAAGAAAC+TGG 0.412230 1_4:+52271473 Msa0169140:CDS
GAGGTGGTGGTGGAGGTGGA+GGG 0.412815 1_4:-52277997 None:intergenic
GATCCTTGGTTACTATCACC+TGG 0.413014 1_4:-52279038 None:intergenic
CCCTATATTCTGGGGCATGA+TGG 0.413337 1_4:-52278294 None:intergenic
ATCTGACTGTCTGGGTCAAA+AGG 0.415246 1_4:+52272285 Msa0169140:CDS
AAAGCATACTTACATTTGTT+GGG 0.415504 1_4:-52265874 None:intergenic
GTTACCGTGGCAGGCCATGC+AGG 0.416356 1_4:-52264531 None:intergenic
AAGAATTGGCAACCACTAAC+AGG 0.416614 1_4:-52279590 None:intergenic
TGTTCAGCTCAACTTCTTCA+GGG 0.417706 1_4:-52270644 None:intergenic
CTCCAATAGGCAACATTTCG+TGG 0.419150 1_4:+52278522 Msa0169140:CDS
TGATAAACACAGGCATATCT+TGG 0.419842 1_4:+52277799 Msa0169140:CDS
ATTAAGAACAGAGAGGGCTT+TGG 0.420546 1_4:+52277497 Msa0169140:CDS
AATGTTCTGGGAACTTTGAC+TGG 0.422408 1_4:-52270793 None:intergenic
TTCCTGGAATTGTTAATTGA+AGG 0.425516 1_4:+52279480 Msa0169140:three_prime_UTR
CTCCCATACATTGTTTGCCT+GGG 0.426501 1_4:+52279533 Msa0169140:three_prime_UTR
TGCATTCAGGCAGGCGACAT+GGG 0.426689 1_4:+52267113 Msa0169140:CDS
AAAAGCATACTTACATTTGT+TGG 0.427871 1_4:-52265875 None:intergenic
AAAAGGCTGTTTCGGGCATT+CGG 0.428522 1_4:+52272302 Msa0169140:CDS
AGTAAATCGAATTGTGAAAT+CGG 0.429842 1_4:-52264370 None:intergenic
AAATAGTCTAGCCTGCATTC+AGG 0.429950 1_4:+52267100 Msa0169140:CDS
GGTTGGCTTGGAAGTATCAT+TGG 0.432449 1_4:-52270736 None:intergenic
GCAGCCAAGGGCTGATCCAT+AGG 0.432636 1_4:-52278235 None:intergenic
GAAGATATGCCTTCCCCATA+TGG 0.432650 1_4:+52278757 Msa0169140:CDS
CCATTGACGAGCGGCGGCAG+CGG 0.433024 1_4:-52264469 None:intergenic
TCACATGGATGACACCCATA+TGG 0.433231 1_4:-52278772 None:intergenic
CACCTCCTCCTTACTCCAAT+AGG 0.434418 1_4:+52278509 Msa0169140:CDS
CAATATTTGGTGGTAATGAC+AGG 0.435744 1_4:-52271658 None:intergenic
AGGAAATCACCTGATCTTGC+TGG 0.437702 1_4:+52270465 Msa0169140:CDS
CATCTCTCTCGATAATCATA+TGG 0.438712 1_4:-52278601 None:intergenic
CTCTAGAATTAAATACAGTA+TGG 0.439407 1_4:-52278072 None:intergenic
CCAATTAACCAATGCAGCCC+AGG 0.439737 1_4:+52270413 Msa0169140:CDS
GCCTATTCTCTGCAGAATGC+AGG 0.440229 1_4:+52279304 Msa0169140:three_prime_UTR
AAAGTTTGGCATTGCAGATA+AGG 0.440693 1_4:+52272654 Msa0169140:CDS
GTACATGCAGGACTCCTTTG+AGG 0.442318 1_4:+52279213 Msa0169140:three_prime_UTR
GTGCATTACCTCAAGCTTCT+GGG 0.443898 1_4:-52279720 None:intergenic
TCTTCATCTTTAAGCATTCG+AGG 0.444143 1_4:-52277686 None:intergenic
AGGTTCCTCCTCAACTCTAA+TGG 0.444405 1_4:-52270757 None:intergenic
GGCATAGGAGGTGGTGGTGG+AGG 0.445289 1_4:-52278019 None:intergenic
TCATCTGCTTTGGTCTTGAA+TGG 0.445397 1_4:+52270504 Msa0169140:CDS
CTGCATTCAGGCAGGCGACA+TGG 0.445871 1_4:+52267112 Msa0169140:CDS
AGAGCCTCCATTCTCACAAT+TGG 0.445997 1_4:-52271000 None:intergenic
TCCTGGAATTGTTAATTGAA+GGG 0.447170 1_4:+52279481 Msa0169140:three_prime_UTR
TTCTTTCCACTGTCATTACA+TGG 0.447382 1_4:-52270381 None:intergenic
GAAGATTTCATAGGTAAAGT+AGG 0.449044 1_4:-52270099 None:intergenic
GGAAATCTCCACCCGTGATC+TGG 0.449327 1_4:-52278808 None:intergenic
TGGTGCACTGCATTACTAAT+AGG 0.450488 1_4:-52278274 None:intergenic
GAACCGTAGGCAATGTCTTA+AGG 0.451378 1_4:+52277251 Msa0169140:CDS
TTCTGGTGCAAATGTACATC+AGG 0.454314 1_4:-52272445 None:intergenic
CCTGTCGATGAAAGTAAGTA+TGG 0.455254 1_4:+52272484 Msa0169140:CDS
CATGGTGTACAATTCTTTGA+AGG 0.456232 1_4:-52271071 None:intergenic
AACTCAACAATCAAGATCAA+TGG 0.456432 1_4:+52272516 Msa0169140:CDS
AGATGCACCCTGGGCTGCAT+TGG 0.456592 1_4:-52270421 None:intergenic
GAATGTTGCTTCTGTACATT+CGG 0.456633 1_4:+52270230 Msa0169140:CDS
CTCAACTCTAATGGTTGGCT+TGG 0.459328 1_4:-52270748 None:intergenic
GGATGACCCTATAAGAGAAA+TGG 0.459730 1_4:+52277518 Msa0169140:CDS
CTGAAATATATAATCGTAGT+TGG 0.461283 1_4:+52279675 Msa0169140:three_prime_UTR
ACAGTGGTTTGATATGCTTT+CGG 0.461473 1_4:+52279649 Msa0169140:three_prime_UTR
TGTGGAGGGGCGGATGGCAG+AGG 0.463219 1_4:-52277935 None:intergenic
GGTCAGTGAGCCGGAGAAGT+GGG 0.463783 1_4:+52265806 Msa0169140:intron
GGAGGAAGCCGACGCCGCTA+TGG 0.465520 1_4:-52264402 None:intergenic
CCCTGCATTCTGCAGAGAAT+AGG 0.465798 1_4:-52279305 None:intergenic
TCATTACATGGAAACATAAA+GGG 0.465818 1_4:-52270369 None:intergenic
TGTGGCATAGGAGGTGGTGG+TGG 0.465908 1_4:-52278022 None:intergenic
GCTACTCCTCGGTGCAGCCA+AGG 0.466363 1_4:-52278248 None:intergenic
GAGCTTCTATTCTTTCGTAC+TGG 0.466572 1_4:-52270333 None:intergenic
CGCTGCTGACTTATCCCCAC+AGG 0.466632 1_4:+52270287 Msa0169140:CDS
TGTGTGCTTCCCTATATTCT+GGG 0.467394 1_4:-52278303 None:intergenic
CTGTGTGCATGGCCTGTTAG+TGG 0.468793 1_4:+52279578 Msa0169140:three_prime_UTR
CACATGGATGACACCCATAT+GGG 0.470548 1_4:-52278771 None:intergenic
TGATCATTAATAGCCACATC+TGG 0.470905 1_4:-52271302 None:intergenic
CGACATGGGGAAATTGGATC+TGG 0.472659 1_4:+52267127 Msa0169140:CDS
TGAATAGCAGTTACCGTGGC+AGG 0.473918 1_4:-52264540 None:intergenic
TTATCTGCTGCCGTGCCTCC+CGG 0.474838 1_4:+52277213 Msa0169140:CDS
TTGACGAGCGGCGGCAGCGG+CGG 0.474940 1_4:-52264466 None:intergenic
TCCTCCTCAACTCTAATGGT+TGG 0.476591 1_4:-52270753 None:intergenic
TTATTCTCTGTTGAAATCAT+CGG 0.478656 1_4:-52271419 None:intergenic
AACTCAAGTTTGCAGTTACC+TGG 0.478735 1_4:+52277653 Msa0169140:CDS
CCTAAACAAAGCCAGAGTTC+AGG 0.484807 1_4:-52279167 None:intergenic
TTGCTCAAAGCATCTCTCTT+CGG 0.485277 1_4:-52270826 None:intergenic
AATAGCATTCTACATACTCC+AGG 0.486157 1_4:+52270927 Msa0169140:CDS
AGCTGATGTGGAGGGGCGGA+TGG 0.486462 1_4:-52277941 None:intergenic
GAGAGATGCTTTGAGCAAGA+TGG 0.487814 1_4:+52270831 Msa0169140:CDS
CAAACGGCTGCAAAGGATGA+AGG 0.488279 1_4:-52279797 None:intergenic
TGATGGCGAACCATGGGCTC+TGG 0.489068 1_4:-52277417 None:intergenic
TGTTGATGGTGAGCTTGAAA+TGG 0.489897 1_4:+52277826 Msa0169140:CDS
CAAGTCCATCCCTGACAGAT+GGG 0.490562 1_4:+52272326 Msa0169140:CDS
AATCAGAAGCATACCAGACT+TGG 0.491328 1_4:-52279060 None:intergenic
ACTCAACAATCAAGATCAAT+GGG 0.491629 1_4:+52272517 Msa0169140:CDS
AAGTTCGATGCCTGTGGTGG+TGG 0.491639 1_4:+52271350 Msa0169140:CDS
TGATGAATTTAGTTTGAATG+AGG 0.491761 1_4:+52270575 Msa0169140:CDS
AGACAACCCACTTCACCCTA+TGG 0.492710 1_4:+52278219 Msa0169140:CDS
AACTGGAATTGCATCTTCAA+AGG 0.493367 1_4:-52278875 None:intergenic
ACATTCTTGCCAGTTTCTTG+TGG 0.493585 1_4:-52271482 None:intergenic
TTGGAGTAAGGAGGAGGTGG+TGG 0.494055 1_4:-52278505 None:intergenic
CAGGAGCGAGTTCGTAAAAG+AGG 0.494691 1_4:+52272219 Msa0169140:intron
GCTTCCTCCAATTGTGAGAA+TGG 0.494768 1_4:+52270993 Msa0169140:CDS
TTCTCTGCAGAATGCAGGGC+AGG 0.495889 1_4:+52279309 Msa0169140:three_prime_UTR
ATAGTCGAGGTAGGACTGCT+TGG 0.496058 1_4:-52277191 None:intergenic
GTGGAGTAACCCCACTTCTC+CGG 0.496565 1_4:-52265816 None:intergenic
TTTCTCCGGCTAGGTGCCAT+CGG 0.497097 1_4:-52264423 None:intergenic
CTCGTCAAACGTCAAGGAAA+GGG 0.499167 1_4:+52269910 Msa0169140:CDS
GGCATTTCCTCTATCAACAT+TGG 0.499514 1_4:-52277891 None:intergenic
TGTTCCTGTGATTCATTGAC+CGG 0.500201 1_4:-52278834 None:intergenic
CTGTAGACATCATCTACTGC+TGG 0.500376 1_4:-52271851 None:intergenic
TCACCCTATGGATCAGCCCT+TGG 0.500806 1_4:+52278231 Msa0169140:CDS
CCTTCTAACAGATGCACCCT+GGG 0.501040 1_4:-52270430 None:intergenic
ACAGAATTCAAATCCTCCTC+TGG 0.501246 1_4:-52272256 None:intergenic
GCCTCCATTCTCACAATTGG+AGG 0.501319 1_4:-52270997 None:intergenic
CCAATCTTACCGGGATAAGG+TGG 0.501364 1_4:-52278634 None:intergenic
TCCTTCTAACAGATGCACCC+TGG 0.502217 1_4:-52270431 None:intergenic
GCCTCCCGGAAATGCTGCAC+AGG 0.502358 1_4:+52277227 Msa0169140:CDS
GCATACCAGACTTGGATCCT+TGG 0.502770 1_4:-52279052 None:intergenic
GAACTCTGGCTTTGTTTAGG+AGG 0.503854 1_4:+52279170 Msa0169140:three_prime_UTR
AAAGAAACCCAAATAGGAAG+AGG 0.505675 1_4:+52270709 Msa0169140:CDS
AGGGGCTAATGGTGGTGGCA+TGG 0.506090 1_4:-52277978 None:intergenic
TCATTACCACCAAATATTGA+AGG 0.507150 1_4:+52271662 Msa0169140:CDS
GTTTCAACATCTGACTGTCT+GGG 0.507194 1_4:+52272277 Msa0169140:CDS
CTACTCCTCGGTGCAGCCAA+GGG 0.507919 1_4:-52278247 None:intergenic
AGTAACCAAGGATCCAAGTC+TGG 0.508086 1_4:+52279047 Msa0169140:three_prime_UTR
TCATTACAACCAGCAAGATC+AGG 0.510603 1_4:-52270474 None:intergenic
TCACATCTGCCACAGAATGA+AGG 0.512408 1_4:-52271748 None:intergenic
TCCTTGTTGTATGAGTTGAA+TGG 0.513000 1_4:-52270051 None:intergenic
GTAAATGCTTCGACATCAGC+AGG 0.514568 1_4:-52269868 None:intergenic
GTAGGCTCATCTGTCCTGAT+TGG 0.514975 1_4:+52271029 Msa0169140:CDS
AAAACTGATTCGACGGCACA+TGG 0.516357 1_4:-52278438 None:intergenic
CAATGCTTGGGACATTGAAA+AGG 0.516809 1_4:+52272584 Msa0169140:CDS
TTCCTCCGATGGCACCTAGC+CGG 0.517157 1_4:+52264418 Msa0169140:exon
ATTTGAAAACTCAGGTGCAT+GGG 0.517247 1_4:+52271573 Msa0169140:CDS
ATGGCACCTAGCCGGAGAAA+AGG 0.517946 1_4:+52264426 Msa0169140:CDS
AATTCCGATATTGATAGCCA+TGG 0.518040 1_4:+52270123 Msa0169140:CDS
GAAATTGGATCTGGCTGGAG+AGG 0.520107 1_4:+52267136 Msa0169140:CDS
TTTGAATGAGGGTAGTGCAA+TGG 0.520743 1_4:+52270587 Msa0169140:CDS
CCATACTTACTTTCATCGAC+AGG 0.521084 1_4:-52272484 None:intergenic
TACTCCAGGGAAAAGCTGTA+AGG 0.521236 1_4:+52270941 Msa0169140:CDS
AAAAGGACAAAGGAAAGTAT+TGG 0.521626 1_4:+52272601 Msa0169140:CDS
CTTGTGGCAGGTCAGTGAGC+CGG 0.522826 1_4:+52265797 Msa0169140:intron
CGACTTTGTTCGTGCTGTGA+AGG 0.525110 1_4:+52269936 Msa0169140:CDS
GGCTGATCCATAGGGTGAAG+TGG 0.526186 1_4:-52278226 None:intergenic
CTGAATCAAGTCTGCATCGG+AGG 0.526643 1_4:+52276969 Msa0169140:CDS
TATCTGTTATGAAGCCCTGT+GGG 0.527043 1_4:-52270302 None:intergenic
GCCGCTCGTCAATGGAAAGT+TGG 0.527617 1_4:+52264477 Msa0169140:CDS
AAGTTAAAGGCTTCCCTGCA+TGG 0.527643 1_4:+52264517 Msa0169140:CDS
TGCAGCATTTCCGGGAGGCA+CGG 0.527783 1_4:-52277223 None:intergenic
CCAGAGTTCAGGCCGAAAAG+AGG 0.528093 1_4:-52279156 None:intergenic
GAAACGATGGAGAGTCAGAA+TGG 0.528180 1_4:+52270875 Msa0169140:CDS
AAATAAATTATAGAATTTGG+CGG 0.528564 1_4:-52279397 None:intergenic
AAATGTTGCCTATTGGAGTA+AGG 0.528606 1_4:-52278517 None:intergenic
ATCCTTGGTTACTATCACCT+GGG 0.529029 1_4:-52279037 None:intergenic
ATGGGGAAATTGGATCTGGC+TGG 0.529096 1_4:+52267131 Msa0169140:CDS
ATGGGTAAGTCAACTGAAGC+GGG 0.529751 1_4:+52272535 Msa0169140:CDS
TCAGCTAATGCTGCTGAAGA+AGG 0.530507 1_4:+52271203 Msa0169140:CDS
CATGTCGCCTGCCTGAATGC+AGG 0.531731 1_4:-52267111 None:intergenic
TTGTACTTTGAAGCAATGCT+TGG 0.532148 1_4:+52272571 Msa0169140:CDS
ATTCGAGGCATGCAAAATCC+AGG 0.533396 1_4:-52277671 None:intergenic
CATATGATTATCGAGAGAGA+TGG 0.534386 1_4:+52278602 Msa0169140:CDS
CTTTCGCTAAAAGAATCAAA+CGG 0.534893 1_4:-52279813 None:intergenic
CCTATTCTCTGCAGAATGCA+GGG 0.534922 1_4:+52279305 Msa0169140:three_prime_UTR
AGGTCAGTGAGCCGGAGAAG+TGG 0.535255 1_4:+52265805 Msa0169140:intron
TTCAGCAGCATTAGCTGACA+TGG 0.535616 1_4:-52271198 None:intergenic
ATCTTACCGGGATAAGGTGG+GGG 0.536419 1_4:-52278631 None:intergenic
GCGGCGTCGGCTTCCTCCGA+TGG 0.536568 1_4:+52264407 Msa0169140:exon
AAGTGGATGAGCTGTCATCC+AGG 0.536586 1_4:+52271453 Msa0169140:CDS
GCAACATTTCGTGGAGAACA+TGG 0.537330 1_4:+52278531 Msa0169140:CDS
AACTGTGTTGAATATGCCTA+TGG 0.537345 1_4:-52264327 None:intergenic
TAAATTATAGAATTTGGCGG+TGG 0.537930 1_4:-52279394 None:intergenic
TCATGATAACGAGGCATCAA+AGG 0.538846 1_4:+52270197 Msa0169140:CDS
CGATATTGATAGCCATGGGT+TGG 0.538910 1_4:+52270128 Msa0169140:CDS
TCTCGTCAAACGTCAAGGAA+AGG 0.539560 1_4:+52269909 Msa0169140:CDS
TATTGATCCGCCTCAAAATG+AGG 0.539702 1_4:+52271796 Msa0169140:CDS
GAGGAAGCCGACGCCGCTAT+GGG 0.539863 1_4:-52264401 None:intergenic
TGACTGGAATTCCGCACACC+AGG 0.540554 1_4:-52270777 None:intergenic
GATGAATTTAGTTTGAATGA+GGG 0.541477 1_4:+52270576 Msa0169140:CDS
TGTCGATAATTTACTGGATG+CGG 0.541884 1_4:-52278364 None:intergenic
ATTAGAGTTGAGGAGGAACC+TGG 0.541923 1_4:+52270759 Msa0169140:CDS
CAATTTGATCTGCAGCACAT+TGG 0.543400 1_4:-52271508 None:intergenic
GTCCTGCATGTACAGAATGA+TGG 0.543606 1_4:-52279203 None:intergenic
CACAGGGCTTCATAACAGAT+AGG 0.543610 1_4:+52270304 Msa0169140:CDS
AAGATATGCCTTCCCCATAT+GGG 0.544776 1_4:+52278758 Msa0169140:CDS
CTCCCCGGTCAATGAATCAC+AGG 0.545204 1_4:+52278830 Msa0169140:CDS
CAATCTTACCGGGATAAGGT+GGG 0.545809 1_4:-52278633 None:intergenic
ATAAATGTCTTACTCACGGC+CGG 0.546591 1_4:+52279754 Msa0169140:three_prime_UTR
CATATCTTGGAAGATGTTGA+TGG 0.547332 1_4:+52277812 Msa0169140:CDS
TCAAGTCCATCCCTGACAGA+TGG 0.547414 1_4:+52272325 Msa0169140:CDS
TGTACTTCAGAATTATGCTC+AGG 0.548321 1_4:-52277758 None:intergenic
GATTGAGGCACAAGCTGATG+TGG 0.549043 1_4:-52277953 None:intergenic
ACTGGAATTGCATCTTCAAA+GGG 0.549046 1_4:-52278874 None:intergenic
AAGCACTTTCTTCAAATCAG+TGG 0.549955 1_4:-52265835 None:intergenic
AAAGAATCAAACGGCTGCAA+AGG 0.550187 1_4:-52279804 None:intergenic
GTCCATCATTCTGTACATGC+AGG 0.550263 1_4:+52279201 Msa0169140:three_prime_UTR
GAAACAAGATGTGGCATAGG+AGG 0.552182 1_4:-52278031 None:intergenic
TGATCTTAAAATAAAGGGTG+TGG 0.553368 1_4:+52270674 Msa0169140:CDS
TAGAGGTCATACAGAATCAC+AGG 0.553777 1_4:+52278090 Msa0169140:CDS
AAATGAGGTTGGTGTTTCTG+AGG 0.554471 1_4:+52271811 Msa0169140:CDS
AATGGAGGCTCTGCTGATGT+AGG 0.554562 1_4:+52271011 Msa0169140:CDS
TGACTCTCCATCGTTTCACA+AGG 0.554889 1_4:-52270869 None:intergenic
GGTGTGTTCAACTGAAACAT+TGG 0.558156 1_4:+52279696 Msa0169140:three_prime_UTR
TCACACAGTCTAACATTCGC+TGG 0.558266 1_4:+52267032 Msa0169140:CDS
ACTGTGTGAATTTATGCAGT+TGG 0.558401 1_4:-52267018 None:intergenic
ACGGGTGGAGATTTCCTCCC+CGG 0.559772 1_4:+52278815 Msa0169140:CDS
AGAAGAATCACCACCACCAC+AGG 0.561368 1_4:-52271360 None:intergenic
AATCTTACCGGGATAAGGTG+GGG 0.561978 1_4:-52278632 None:intergenic
GAATAAATTATCTAATCAAG+TGG 0.562128 1_4:+52271436 Msa0169140:CDS
GTAAATTATCGACATTCTGA+TGG 0.563334 1_4:+52278373 Msa0169140:CDS
CAGCCAAGGGCTGATCCATA+GGG 0.565814 1_4:-52278234 None:intergenic
AGTCTAGCCTGCATTCAGGC+AGG 0.566489 1_4:+52267104 Msa0169140:CDS
CTTCCCTGCATGGCCTGCCA+CGG 0.566854 1_4:+52264527 Msa0169140:CDS
CATAAAACCGTGTGGGACAG+TGG 0.567386 1_4:+52279633 Msa0169140:three_prime_UTR
GTTCCTGTGATTCATTGACC+GGG 0.567669 1_4:-52278833 None:intergenic
TCAATGCCTTTCAATTCCAT+AGG 0.567755 1_4:+52264311 Msa0169140:five_prime_UTR
CCATGCACACAGCCTTGAGT+TGG 0.567993 1_4:-52279567 None:intergenic
ATATGATTATCGAGAGAGAT+GGG 0.568551 1_4:+52278603 Msa0169140:CDS
ATTCCGATATTGATAGCCAT+GGG 0.569261 1_4:+52270124 Msa0169140:CDS
CAATAGCTATGCGTGTTGCT+CGG 0.569878 1_4:-52272624 None:intergenic
TACATGGAAACATAAAGGGT+TGG 0.570305 1_4:-52270365 None:intergenic
CAAGCCAACCATTAGAGTTG+AGG 0.570478 1_4:+52270749 Msa0169140:CDS
CATACTGTATTTAATTCTAG+AGG 0.571440 1_4:+52278073 Msa0169140:CDS
CCAACTCAAGGCTGTGTGCA+TGG 0.571580 1_4:+52279567 Msa0169140:three_prime_UTR
TGATTCGACGGCACATGGCG+AGG 0.571740 1_4:-52278433 None:intergenic
TGGGATAAATGTCTTACTCA+CGG 0.572404 1_4:+52279750 Msa0169140:three_prime_UTR
GGTAAAGTAGGCGATAAAGC+AGG 0.573057 1_4:-52270087 None:intergenic
GCAGCTGAGTCATCCTCCGC+TGG 0.573176 1_4:-52270156 None:intergenic
GACTACAACTTCCATTGTGA+AGG 0.577375 1_4:-52272423 None:intergenic
TGTACTTTGAAGCAATGCTT+GGG 0.578923 1_4:+52272572 Msa0169140:CDS
GGTTAGTCACACTGCTAATG+TGG 0.580760 1_4:+52271550 Msa0169140:CDS
GTAAAAGAGGTAAAATGTGA+AGG 0.581547 1_4:+52272232 Msa0169140:CDS
GATGAAACAAGATGTGGCAT+AGG 0.581617 1_4:-52278034 None:intergenic
ATTGGATCTGGCTGGAGAGG+AGG 0.582904 1_4:+52267139 Msa0169140:CDS
CTATTGGAGTAAGGAGGAGG+TGG 0.583070 1_4:-52278508 None:intergenic
TTACCGTGGCAGGCCATGCA+GGG 0.583361 1_4:-52264530 None:intergenic
AACTTTCCATTGACGAGCGG+CGG 0.583743 1_4:-52264475 None:intergenic
TGACCCTATAAGAGAAATGG+AGG 0.584295 1_4:+52277521 Msa0169140:CDS
ATATTGCCTTCAATATTTGG+TGG 0.584568 1_4:-52271668 None:intergenic
AAGAAACCCAAATAGGAAGA+GGG 0.585408 1_4:+52270710 Msa0169140:CDS
GCACTGCATTACTAATAGGT+TGG 0.585480 1_4:-52278270 None:intergenic
AGATGTGGCATAGGAGGTGG+TGG 0.585833 1_4:-52278025 None:intergenic
CAATCTCTCGTCAAACGTCA+AGG 0.585976 1_4:+52269904 Msa0169140:CDS
TTGCCTTAAGACATTGCCTA+CGG 0.586657 1_4:-52277254 None:intergenic
CTAATAGGTTGGCTACTCCT+CGG 0.588324 1_4:-52278259 None:intergenic
AATGAGGTTGGTGTTTCTGA+GGG 0.588520 1_4:+52271812 Msa0169140:CDS
ATCAAGTCTGCATCGGAGGG+TGG 0.588826 1_4:+52276973 Msa0169140:CDS
TACAGTATGGCATGGATCAG+AGG 0.588863 1_4:-52278059 None:intergenic
TGCCTATTGGAGTAAGGAGG+AGG 0.589187 1_4:-52278511 None:intergenic
AAACGATGGAGAGTCAGAAT+GGG 0.591392 1_4:+52270876 Msa0169140:CDS
TACCCAGGCAAACAATGTAT+GGG 0.591412 1_4:-52279535 None:intergenic
AACAGCATGCAAGACATCGA+AGG 0.592443 1_4:+52278476 Msa0169140:CDS
CGGTGAAGGCGTTTAGATGG+AGG 0.592675 1_4:-52271164 None:intergenic
AATATTATTGTTAAACTCTG+TGG 0.592758 1_4:-52277912 None:intergenic
AAACTGAATCAAGTCTGCAT+CGG 0.593236 1_4:+52276966 Msa0169140:CDS
CACCTAGAATACCAGATCAC+GGG 0.593642 1_4:+52278797 Msa0169140:CDS
TTGAGGCGGATCAATATTAG+GGG 0.593766 1_4:-52271789 None:intergenic
GCATTCAGGCAGGCGACATG+GGG 0.595697 1_4:+52267114 Msa0169140:CDS
GAATTAAATACAGTATGGCA+TGG 0.596319 1_4:-52278067 None:intergenic
CACAAGCTGATGTGGAGGGG+CGG 0.596448 1_4:-52277945 None:intergenic
GATAGAAGATATACAGCATG+TGG 0.596941 1_4:-52271270 None:intergenic
TGGAATAAACCTTCATTCTG+TGG 0.599663 1_4:+52271739 Msa0169140:CDS
TTGCAAATTGACGTGTTTGG+AGG 0.600311 1_4:-52272373 None:intergenic
GGTATTCTAGGTGGTTCACA+TGG 0.600414 1_4:-52278787 None:intergenic
GAGGCACAAGCTGATGTGGA+GGG 0.600831 1_4:-52277949 None:intergenic
GATTTGAAAACTCAGGTGCA+TGG 0.602583 1_4:+52271572 Msa0169140:CDS
GGATTCAACATAATCTGCAC+AGG 0.603413 1_4:+52279237 Msa0169140:three_prime_UTR
GCTGATCCATAGGGTGAAGT+GGG 0.603553 1_4:-52278225 None:intergenic
TTCATTTCAACATCACGAGA+GGG 0.603955 1_4:-52277860 None:intergenic
TGGCCTCTAAAGCACGGTGA+AGG 0.604411 1_4:-52271178 None:intergenic
TAATGTGGATTTGAAAACTC+AGG 0.604444 1_4:+52271565 Msa0169140:CDS
GAAGAGAGTGATTCTGATGG+AGG 0.606087 1_4:+52277716 Msa0169140:CDS
AAAAGGAGGCAGTAAAGCAG+CGG 0.606560 1_4:+52264443 Msa0169140:CDS
TTTGGTGGTAATGACAGGGC+AGG 0.606611 1_4:-52271653 None:intergenic
ACTCTCCATCGTTTCACAAG+GGG 0.609506 1_4:-52270867 None:intergenic
CAATTAACCAATGCAGCCCA+GGG 0.609581 1_4:+52270414 Msa0169140:CDS
TTATGTTGAATCCTCCTCAA+AGG 0.609918 1_4:-52279227 None:intergenic
GACTCTCCATCGTTTCACAA+GGG 0.610060 1_4:-52270868 None:intergenic
GATCCGCCTCAAAATGAGGT+TGG 0.611253 1_4:+52271800 Msa0169140:CDS
GCCAACCATTAGAGTTGAGG+AGG 0.611440 1_4:+52270752 Msa0169140:CDS
ATGTTTCCATGTAATGACAG+TGG 0.611466 1_4:+52270375 Msa0169140:CDS
TGAATCAAGTCTGCATCGGA+GGG 0.611818 1_4:+52276970 Msa0169140:CDS
CTCCGGCTAGGTGCCATCGG+AGG 0.613521 1_4:-52264420 None:intergenic
TGAAAGTAAGTATGGATCTG+AGG 0.613906 1_4:+52272492 Msa0169140:CDS
AATGAAGAGAGTGATTCTGA+TGG 0.613964 1_4:+52277713 Msa0169140:CDS
TTTGGTCTTGAATGGTAGCA+TGG 0.614302 1_4:+52270512 Msa0169140:CDS
AATTTACTGGATGCGGTACA+GGG 0.614321 1_4:-52278357 None:intergenic
TCTCGATAATCATATGGAGG+CGG 0.614493 1_4:-52278595 None:intergenic
CAAAAGTTCGATGCCTGTGG+TGG 0.614774 1_4:+52271347 Msa0169140:CDS
GGTAAAATGTGAAGGACCAG+AGG 0.615272 1_4:+52272240 Msa0169140:CDS
AATATGCCTATGGAATTGAA+AGG 0.615546 1_4:-52264317 None:intergenic
CTCTCTCGATAATCATATGG+AGG 0.616132 1_4:-52278598 None:intergenic
GAAGAAGTTGAGCTGAACAA+AGG 0.616273 1_4:+52270648 Msa0169140:CDS
AGATCAAACATTCTGCTCTG+TGG 0.617643 1_4:+52271124 Msa0169140:CDS
TGCATGTTGACGAATATGGA+AGG 0.619258 1_4:+52277547 Msa0169140:CDS
AAACGGCTGCAAAGGATGAA+GGG 0.619576 1_4:-52279796 None:intergenic
AAGTCCATCCCTGACAGATG+GGG 0.619884 1_4:+52272327 Msa0169140:CDS
AAAGGGTGGTCTAAATGGCA+TGG 0.620038 1_4:-52278857 None:intergenic
GGCGAACCATGGGCTCTGGT+AGG 0.620537 1_4:-52277413 None:intergenic
TGAGGCACAAGCTGATGTGG+AGG 0.620691 1_4:-52277950 None:intergenic
ACAGCATGCAAGACATCGAA+GGG 0.620892 1_4:+52278477 Msa0169140:CDS
CCACCTAGAATACCAGATCA+CGG 0.620965 1_4:+52278796 Msa0169140:CDS
ACAAAAGAAAACTGATTCGA+CGG 0.622476 1_4:-52278445 None:intergenic
GCTATTGAGCTCTCCCTCTG+TGG 0.622590 1_4:-52270910 None:intergenic
CTTCTATAATTGATAAACAC+AGG 0.622662 1_4:+52277789 Msa0169140:CDS
ATATCTTCGTCATGATACCT+AGG 0.624314 1_4:-52278742 None:intergenic
TATCAAGACAAGTCCAGATG+TGG 0.625157 1_4:+52271289 Msa0169140:CDS
GGTAAATCATCTTCCACAGA+GGG 0.625649 1_4:+52270897 Msa0169140:CDS
GCACCTAGCCGGAGAAAAGG+AGG 0.625949 1_4:+52264429 Msa0169140:CDS
TTTGAAAACTCAGGTGCATG+GGG 0.626007 1_4:+52271574 Msa0169140:CDS
ATTGAATTGAGATATTGGAT+CGG 0.626366 1_4:-52264293 None:intergenic
CCGCTGGACATACCAACCCA+TGG 0.626776 1_4:-52270140 None:intergenic
CATCTGACCCATAGCGGCGT+CGG 0.628258 1_4:+52264394 Msa0169140:five_prime_UTR
GCAATTCCAGTTACAAACAG+AGG 0.629736 1_4:+52278886 Msa0169140:CDS
AAAATGTGAAGGACCAGAGG+AGG 0.630132 1_4:+52272243 Msa0169140:CDS
ATGCTGCACAGGAGAACCGT+AGG 0.631261 1_4:+52277238 Msa0169140:CDS
GGCAATTGATGTCATTCTTG+AGG 0.632098 1_4:-52271249 None:intergenic
GGAATTGCATCTTCAAAGGG+TGG 0.633017 1_4:-52278871 None:intergenic
AGGCACAAGCTGATGTGGAG+GGG 0.634449 1_4:-52277948 None:intergenic
GTATTTGGTATGCCAACTCA+AGG 0.636565 1_4:+52279555 Msa0169140:three_prime_UTR
AATGACAGTGGAAAGAATGC+TGG 0.637226 1_4:+52270387 Msa0169140:CDS
CTTCACAGCACGAACAAAGT+CGG 0.637347 1_4:-52269935 None:intergenic
TTGGAGGTGATCCTTGTGGA+AGG 0.637454 1_4:-52272357 None:intergenic
GCCAACTTTCCATTGACGAG+CGG 0.638501 1_4:-52264478 None:intergenic
AATGGGTAAGTCAACTGAAG+CGG 0.638517 1_4:+52272534 Msa0169140:CDS
CCGTGATCTGGTATTCTAGG+TGG 0.639150 1_4:-52278796 None:intergenic
GGTGTTACTATGCATGATAG+AGG 0.640091 1_4:+52278394 Msa0169140:CDS
TGAGAAGAAGACAGTGTGTG+CGG 0.641308 1_4:-52264268 None:intergenic
TGGGTTGGTATGTCCAGCGG+AGG 0.641427 1_4:+52270143 Msa0169140:CDS
GTCAGTGAGCCGGAGAAGTG+GGG 0.641630 1_4:+52265807 Msa0169140:CDS
GGATGACACCCATATGGGGA+AGG 0.641685 1_4:-52278766 None:intergenic
ACTTGCCCCTTGTGAAACGA+TGG 0.642321 1_4:+52270862 Msa0169140:CDS
CATGCAGGACTCCTTTGAGG+AGG 0.642904 1_4:+52279216 Msa0169140:three_prime_UTR
AGGTAGGACTGCTTGGATAG+CGG 0.643434 1_4:-52277184 None:intergenic
AGTAGTAATATCCTTCACAA+TGG 0.645350 1_4:+52272412 Msa0169140:CDS
AATATTTGGTGGTAATGACA+GGG 0.645547 1_4:-52271657 None:intergenic
TGGGACATTGAAAAGGACAA+AGG 0.645775 1_4:+52272591 Msa0169140:CDS
GAGGAAGCTATCATCTGCGG+TGG 0.647161 1_4:-52270978 None:intergenic
ATTCATTTCAACATCACGAG+AGG 0.647845 1_4:-52277861 None:intergenic
ACAAGATGTGGCATAGGAGG+TGG 0.647934 1_4:-52278028 None:intergenic
ATAGCATTCTACATACTCCA+GGG 0.648209 1_4:+52270928 Msa0169140:CDS
TTGAGGAGGAACCTGGTGTG+CGG 0.648419 1_4:+52270766 Msa0169140:CDS
AGTCCATCCCTGACAGATGG+GGG 0.648758 1_4:+52272328 Msa0169140:CDS
ACGATCATTAAGAACAGAGA+GGG 0.648806 1_4:+52277491 Msa0169140:CDS
TTCCTGTGATTCATTGACCG+GGG 0.649178 1_4:-52278832 None:intergenic
GTGTTACTATGCATGATAGA+GGG 0.649715 1_4:+52278395 Msa0169140:CDS
CTTCTTGCATAAAACCGTGT+GGG 0.651926 1_4:+52279626 Msa0169140:three_prime_UTR
TCCTCCAATTGTGAGAATGG+AGG 0.652049 1_4:+52270996 Msa0169140:CDS
CCATGGGTTGGTATGTCCAG+CGG 0.652819 1_4:+52270140 Msa0169140:CDS
CAGCAGATAATAGTCGAGGT+AGG 0.653149 1_4:-52277200 None:intergenic
GTGTGCTTCCCTATATTCTG+GGG 0.653795 1_4:-52278302 None:intergenic
CAGCAAAGAGACAGAGCTAG+CGG 0.657152 1_4:+52267067 Msa0169140:CDS
CTGTGATTCATTGACCGGGG+AGG 0.658640 1_4:-52278829 None:intergenic
CTGACATGGCCTCTAAAGCA+CGG 0.659902 1_4:-52271184 None:intergenic
CTAGAATACCAGATCACGGG+TGG 0.661192 1_4:+52278800 Msa0169140:CDS
GCCATTCAACTCATACAACA+AGG 0.662651 1_4:+52270050 Msa0169140:CDS
AGTTGGCATACCAAATACCC+AGG 0.665852 1_4:-52279550 None:intergenic
TCCAATACATCAGAGCACAA+TGG 0.667661 1_4:+52271719 Msa0169140:CDS
TTACTTCATCTGACCCATAG+CGG 0.671151 1_4:+52264388 Msa0169140:five_prime_UTR
GTGGCTATTAATGATCATGA+AGG 0.671423 1_4:+52271308 Msa0169140:CDS
TCCTGTGCAGCATTTCCGGG+AGG 0.671853 1_4:-52277228 None:intergenic
GTGTTTGGAGGTGATCCTTG+TGG 0.672508 1_4:-52272361 None:intergenic
ATCTGTTATGAAGCCCTGTG+GGG 0.673740 1_4:-52270301 None:intergenic
CCTTCTTGCATAAAACCGTG+TGG 0.675280 1_4:+52279625 Msa0169140:three_prime_UTR
ACATGGATGACACCCATATG+GGG 0.676051 1_4:-52278770 None:intergenic
TATCAAACCACTGTCCCACA+CGG 0.676230 1_4:-52279640 None:intergenic
CTGTGGGGATAAGTCAGCAG+CGG 0.677313 1_4:-52270286 None:intergenic
TGTTGCCTATTGGAGTAAGG+AGG 0.678002 1_4:-52278514 None:intergenic
GGCCCAGGTGATAGTAACCA+AGG 0.678825 1_4:+52279035 Msa0169140:exon
GGTGGTGGCATGGAAGATTG+AGG 0.681211 1_4:-52277968 None:intergenic
GAGGTAGATGAAACAAGATG+TGG 0.681315 1_4:-52278040 None:intergenic
ACGGCAGCAGATAATAGTCG+AGG 0.681559 1_4:-52277204 None:intergenic
AGTCGTTGTAGAGTTGTCAG+AGG 0.684741 1_4:+52279335 Msa0169140:three_prime_UTR
GCTGCTGACTTATCCCCACA+GGG 0.684778 1_4:+52270288 Msa0169140:CDS
TTCGACGGCACATGGCGAGG+CGG 0.686762 1_4:-52278430 None:intergenic
TTGGAGGAAGCTATCATCTG+CGG 0.690162 1_4:-52270981 None:intergenic
TTGCAAAAGTTCGATGCCTG+TGG 0.691993 1_4:+52271344 Msa0169140:CDS
GCATGCAAGACATCGAAGGG+AGG 0.692791 1_4:+52278480 Msa0169140:CDS
GCTATTAATGATCATGAAGG+TGG 0.692796 1_4:+52271311 Msa0169140:CDS
AGATGAATCTCATGATAACG+AGG 0.696998 1_4:+52270188 Msa0169140:CDS
CTTGGTGAAGCTAACTGTGG+TGG 0.698159 1_4:+52270000 Msa0169140:CDS
ACATTGGACCCAGAAGCTTG+AGG 0.699979 1_4:+52279712 Msa0169140:three_prime_UTR
TCTTACCGGGATAAGGTGGG+GGG 0.703120 1_4:-52278630 None:intergenic
CTATCTGTTATGAAGCCCTG+TGG 0.714051 1_4:-52270303 None:intergenic
GACCCTATAAGAGAAATGGA+GGG 0.715184 1_4:+52277522 Msa0169140:CDS
ATCAGCCCTTGGCTGCACCG+AGG 0.715486 1_4:+52278242 Msa0169140:CDS
GGTCTTGAATGGTAGCATGG+AGG 0.721820 1_4:+52270515 Msa0169140:CDS
CAACTTGGTGAAGCTAACTG+TGG 0.738092 1_4:+52269997 Msa0169140:CDS
GACGATCATTAAGAACAGAG+AGG 0.746316 1_4:+52277490 Msa0169140:CDS
GGGTAAATCATCTTCCACAG+AGG 0.753500 1_4:+52270896 Msa0169140:CDS
TGATGTCGAAGCATTTACCG+AGG 0.757842 1_4:+52269873 Msa0169140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTTTATATTTTTATGTT+TGG + chr1_4:52264583-52264602 Msa0169140:intron 10.0%
!!! AAGTTTATATTTTTATGTTT+GGG + chr1_4:52264584-52264603 Msa0169140:intron 10.0%
!!! TATAGTTTACTATATTTTAA+TGG + chr1_4:52266284-52266303 Msa0169140:intron 10.0%
!!! TTTATTTTCTGTTTTTAATA+TGG + chr1_4:52267524-52267543 Msa0169140:intron 10.0%
!! CTAAAATAAAAATATAAAGT+AGG - chr1_4:52273340-52273359 None:intergenic 10.0%
!! TAATAAAAAATATAGTTCAA+AGG + chr1_4:52273584-52273603 Msa0169140:intron 10.0%
!! AATAAAAAATATAGTTCAAA+GGG + chr1_4:52273585-52273604 Msa0169140:intron 10.0%
!!! AAATTTCTAAATTGATTTTA+GGG + chr1_4:52273961-52273980 Msa0169140:intron 10.0%
!! TTCAAAAAATAATCAAATAT+CGG + chr1_4:52274224-52274243 Msa0169140:intron 10.0%
!! NNNNNNATCTAAGAAATTAT+AGG + chr1_4:52275984-52276003 Msa0169140:intron 10.0%
!! NNNNNATCTAAGAAATTATA+GGG + chr1_4:52275985-52276004 Msa0169140:intron 10.0%
!! TAATATAATAATACAATAAG+AGG + chr1_4:52276657-52276676 Msa0169140:intron 10.0%
!!! TAAAATAAAAAATTTTGCAT+AGG - chr1_4:52276854-52276873 None:intergenic 10.0%
!!! ATTATCTTTTAACTTTTTAT+AGG + chr1_4:52277362-52277381 Msa0169140:intron 10.0%
!!! TTAAATTAAGCTTTTTTTAT+TGG + chr1_4:52278713-52278732 Msa0169140:intron 10.0%
!!! TAAATTAAGCTTTTTTTATT+GGG + chr1_4:52278714-52278733 Msa0169140:intron 10.0%
!! ATGAAATAAATTATAGAATT+TGG - chr1_4:52279403-52279422 None:intergenic 10.0%
!!! GTAATTATTCATTAATTTTG+TGG + chr1_4:52264804-52264823 Msa0169140:intron 15.0%
!!! TTATTATTGATTATAGCAAA+TGG + chr1_4:52264865-52264884 Msa0169140:intron 15.0%
!!! AAGTTAATTTCTTATTTGTT+TGG + chr1_4:52264921-52264940 Msa0169140:intron 15.0%
!!! TTCAATTTTAACCAAATTAA+TGG + chr1_4:52265633-52265652 Msa0169140:intron 15.0%
!!! TTAATTTTGAACCATTAATT+TGG - chr1_4:52265647-52265666 None:intergenic 15.0%
!!! GTCTTTTTTTTTTTTTTGAA+TGG + chr1_4:52266801-52266820 Msa0169140:intron 15.0%
!! AATTTAAAAAACACCATATT+GGG - chr1_4:52268083-52268102 None:intergenic 15.0%
!! TAATTTATTAGAATTCCAAT+TGG + chr1_4:52269071-52269090 Msa0169140:intron 15.0%
!! AATTTATTAGAATTCCAATT+GGG + chr1_4:52269072-52269091 Msa0169140:intron 15.0%
!! TAAATAGTTATGAAAATTCA+AGG + chr1_4:52269099-52269118 Msa0169140:intron 15.0%
!! AAATAGTTATGAAAATTCAA+GGG + chr1_4:52269100-52269119 Msa0169140:intron 15.0%
!! ATTTGTACAAAAAATATTCA+AGG - chr1_4:52271922-52271941 None:intergenic 15.0%
!! ATAAAAAATATCACTTTACT+AGG - chr1_4:52272095-52272114 None:intergenic 15.0%
!!! TTTTTCTTGAATAAAAGAAA+TGG - chr1_4:52272177-52272196 None:intergenic 15.0%
!!! TATCAATGGTTTTTTTTTTT+TGG + chr1_4:52273377-52273396 Msa0169140:intron 15.0%
!!! AATCTTTTTCATTTTATCTA+GGG - chr1_4:52273620-52273639 None:intergenic 15.0%
!!! TAATCTTTTTCATTTTATCT+AGG - chr1_4:52273621-52273640 None:intergenic 15.0%
!!! TACAAAATGTTTTAGAAATA+GGG - chr1_4:52273933-52273952 None:intergenic 15.0%
!!! ATACAAAATGTTTTAGAAAT+AGG - chr1_4:52273934-52273953 None:intergenic 15.0%
!!! TATTTCTAAAACATTTTGTA+TGG + chr1_4:52273933-52273952 Msa0169140:intron 15.0%
!! CTAAAATCAATTTAGAAATT+TGG - chr1_4:52273962-52273981 None:intergenic 15.0%
!!! CAAATTTCTAAATTGATTTT+AGG + chr1_4:52273960-52273979 Msa0169140:intron 15.0%
!!! ATATTAGTAACAATGAATTT+TGG + chr1_4:52274467-52274486 Msa0169140:intron 15.0%
!!! ATTCTATTTTTAAGCTTTTA+TGG + chr1_4:52274526-52274545 Msa0169140:intron 15.0%
!!! TTCTATTTTTAAGCTTTTAT+GGG + chr1_4:52274527-52274546 Msa0169140:intron 15.0%
!!! TTTTGATTCATATATAATAC+TGG + chr1_4:52274721-52274740 Msa0169140:intron 15.0%
!! ATTGCTTATAAATTAAAGTT+TGG + chr1_4:52274967-52274986 Msa0169140:intron 15.0%
!! ACTAAATTGTACAAAAATAA+TGG - chr1_4:52275371-52275390 None:intergenic 15.0%
!! TAGACAAATTTCAAATAAAT+GGG - chr1_4:52276553-52276572 None:intergenic 15.0%
!! TTAGACAAATTTCAAATAAA+TGG - chr1_4:52276554-52276573 None:intergenic 15.0%
!! ATCAATTAATTATCAAATGT+TGG - chr1_4:52277116-52277135 None:intergenic 15.0%
!!! TTAACTTTTTATAGGTTTTA+AGG + chr1_4:52277370-52277389 Msa0169140:intron 15.0%
!! ATTACTATTTAAATAATCAG+TGG + chr1_4:52278137-52278156 Msa0169140:intron 15.0%
!! AAATAAATTATAGAATTTGG+CGG - chr1_4:52279400-52279419 None:intergenic 15.0%
!!! AAACTTTTCAACATAATTAG+CGG - chr1_4:52264722-52264741 None:intergenic 20.0%
!!! TCTTTTGAGTTTAGAATTAT+TGG + chr1_4:52264773-52264792 Msa0169140:intron 20.0%
!!! TTGGTAATACTTGAAATTTA+AGG + chr1_4:52265057-52265076 Msa0169140:intron 20.0%
!! TTCTTAAAGAAGTTTATTTG+TGG + chr1_4:52265086-52265105 Msa0169140:intron 20.0%
!! TCTTAAAGAAGTTTATTTGT+GGG + chr1_4:52265087-52265106 Msa0169140:intron 20.0%
!! TTCTATCACTAAAATAAAGA+AGG - chr1_4:52265304-52265323 None:intergenic 20.0%
!!! AGTTTACTATATTTTAATGG+TGG + chr1_4:52266287-52266306 Msa0169140:intron 20.0%
!!! TTACTGACTTATTGTTAATA+GGG + chr1_4:52266666-52266685 Msa0169140:intron 20.0%
!! CAAAAAAAAAAAAAAGACAG+TGG - chr1_4:52266799-52266818 None:intergenic 20.0%
!!! AGATTCAGAAATAGTTTTTT+CGG - chr1_4:52266856-52266875 None:intergenic 20.0%
!!! TCAATTAAGAAACAGTTTTT+CGG - chr1_4:52267293-52267312 None:intergenic 20.0%
!! AATTATATGGTTCATTTACT+CGG + chr1_4:52267366-52267385 Msa0169140:intron 20.0%
!!! ATTTTCTGTTTTTAATATGG+TGG + chr1_4:52267527-52267546 Msa0169140:intron 20.0%
!! AAATTTCAATTCAAATCTGA+CGG - chr1_4:52267666-52267685 None:intergenic 20.0%
!! GAATTTAAAAAACACCATAT+TGG - chr1_4:52268084-52268103 None:intergenic 20.0%
!! GAATAAATTATCTAATCAAG+TGG + chr1_4:52271436-52271455 Msa0169140:CDS 20.0%
!!! TTACATTTTGAATCAAGATT+TGG - chr1_4:52271608-52271627 None:intergenic 20.0%
!! ATAATATTGCCTTCAATATT+TGG - chr1_4:52271674-52271693 None:intergenic 20.0%
!! TTGTTATATAATATATGGCT+AGG + chr1_4:52272016-52272035 Msa0169140:intron 20.0%
!!! TGAATACTTGTTGATATAAT+TGG + chr1_4:52272750-52272769 Msa0169140:intron 20.0%
!! AGTATTAACAATCCAAAATT+GGG - chr1_4:52273115-52273134 None:intergenic 20.0%
!! AAGTATTAACAATCCAAAAT+TGG - chr1_4:52273116-52273135 None:intergenic 20.0%
!!! ACTTAGTGTTTTTTATGATT+GGG - chr1_4:52273302-52273321 None:intergenic 20.0%
!!! AACTTAGTGTTTTTTATGAT+TGG - chr1_4:52273303-52273322 None:intergenic 20.0%
!!! TATTATGTTTTGTCAATTAG+TGG + chr1_4:52273519-52273538 Msa0169140:intron 20.0%
!! TTTCAACTAAAATCAAATAG+CGG - chr1_4:52273897-52273916 None:intergenic 20.0%
!! TGAACAAATTACATGAATAA+TGG - chr1_4:52274208-52274227 None:intergenic 20.0%
!! AAATAGTAAAATCCATTTCA+TGG - chr1_4:52275134-52275153 None:intergenic 20.0%
!! AATGATAAATGAATGATCTT+TGG - chr1_4:52275544-52275563 None:intergenic 20.0%
!! GTAATTCAATACCAAAAATA+AGG - chr1_4:52275596-52275615 None:intergenic 20.0%
!!! TATTTTTGGTATTGAATTAC+TGG + chr1_4:52275596-52275615 Msa0169140:intron 20.0%
!! TAAATGGAGAAATTGATTAT+GGG - chr1_4:52276089-52276108 None:intergenic 20.0%
!! ATAAATGGAGAAATTGATTA+TGG - chr1_4:52276090-52276109 None:intergenic 20.0%
!! TGTTTATTGTTAGGAATAAA+TGG - chr1_4:52276105-52276124 None:intergenic 20.0%
!!! ATCAAAAGGCATTTTATTTT+GGG - chr1_4:52276515-52276534 None:intergenic 20.0%
!!! AATCAAAAGGCATTTTATTT+TGG - chr1_4:52276516-52276535 None:intergenic 20.0%
!! AAACTGAAGAAAAAATCAAA+AGG - chr1_4:52276529-52276548 None:intergenic 20.0%
!! TTGAATTTATACCTCAAATT+TGG + chr1_4:52276746-52276765 Msa0169140:intron 20.0%
!! AATATTATTGTTAAACTCTG+TGG - chr1_4:52277915-52277934 None:intergenic 20.0%
!! TTAATCTTTCGTGATTATTA+TGG - chr1_4:52278573-52278592 None:intergenic 20.0%
!!! ATAATTGATGCTTATTTTGA+TGG + chr1_4:52278658-52278677 Msa0169140:intron 20.0%
!! ATAGAAAATTATCATGATAG+AGG - chr1_4:52278937-52278956 None:intergenic 20.0%
!!! ATTAATTTTCCAATGTTGAA+GGG - chr1_4:52278977-52278996 None:intergenic 20.0%
!! TTCAACATTGGAAAATTAAT+GGG + chr1_4:52278977-52278996 Msa0169140:intron 20.0%
!! TACTGATCTAAATTCTATAA+GGG - chr1_4:52279431-52279450 None:intergenic 20.0%
!!! ACATTTCTGAAAGATATTTT+AGG - chr1_4:52279884-52279903 None:intergenic 20.0%
! ATTGAATTGAGATATTGGAT+CGG - chr1_4:52264296-52264315 None:intergenic 25.0%
! AGTAAATCGAATTGTGAAAT+CGG - chr1_4:52264373-52264392 None:intergenic 25.0%
!!! TGCGTTTTTTCATATGTTTT+TGG + chr1_4:52264608-52264627 Msa0169140:intron 25.0%
!!! TTAGTTTTACCCTAAATTTC+AGG - chr1_4:52265162-52265181 None:intergenic 25.0%
!! AAATCTTCTATGAGACTTTT+TGG + chr1_4:52265182-52265201 Msa0169140:intron 25.0%
!! AATCTTCTATGAGACTTTTT+GGG + chr1_4:52265183-52265202 Msa0169140:intron 25.0%
! GGTAAGCAAATGATAATAAT+GGG + chr1_4:52265206-52265225 Msa0169140:intron 25.0%
! GAAGGGAATTTATGATTTAT+TGG + chr1_4:52265270-52265289 Msa0169140:intron 25.0%
!!! TTCACGTTTTTACTCTAAAA+AGG - chr1_4:52265590-52265609 None:intergenic 25.0%
!!! TTTTAGAGTAAAAACGTGAA+AGG + chr1_4:52265590-52265609 Msa0169140:intron 25.0%
!!! CTTTTGGTTAAAAAACTGAT+TGG + chr1_4:52265712-52265731 Msa0169140:intron 25.0%
!!! AAAGTGCTTGTTTTCTTTTT+TGG + chr1_4:52265849-52265868 Msa0169140:CDS 25.0%
! AAAGCATACTTACATTTGTT+GGG - chr1_4:52265877-52265896 None:intergenic 25.0%
!! AAAAGCATACTTACATTTGT+TGG - chr1_4:52265878-52265897 None:intergenic 25.0%
! CTTGGTTACAAAATTGAAAA+TGG - chr1_4:52265952-52265971 None:intergenic 25.0%
! TCTGTGATATCCATATTATT+AGG + chr1_4:52266004-52266023 Msa0169140:intron 25.0%
! TCATAGCTATCCTAATAATA+TGG - chr1_4:52266017-52266036 None:intergenic 25.0%
! GATATAATGTCAGTAAAGAA+GGG - chr1_4:52266071-52266090 None:intergenic 25.0%
! AGATATAATGTCAGTAAAGA+AGG - chr1_4:52266072-52266091 None:intergenic 25.0%
! TCTTTACTGACATTATATCT+CGG + chr1_4:52266072-52266091 Msa0169140:intron 25.0%
!! GATATGCTTATTATGGTTTT+TGG + chr1_4:52266109-52266128 Msa0169140:intron 25.0%
! CTAAGTATGGTAAAAGATTA+CGG + chr1_4:52266209-52266228 Msa0169140:intron 25.0%
! ATGAATACTAAAATAGTCAC+AGG - chr1_4:52266406-52266425 None:intergenic 25.0%
!!! CATTTTAGCTTATCAATTGT+TGG + chr1_4:52266462-52266481 Msa0169140:intron 25.0%
!!! CATTTTAGCTTATCAACTAT+TGG + chr1_4:52266547-52266566 Msa0169140:intron 25.0%
! ATGTGTAGTAGAAAATATGA+TGG + chr1_4:52266582-52266601 Msa0169140:intron 25.0%
!!! GTTACTGACTTATTGTTAAT+AGG + chr1_4:52266665-52266684 Msa0169140:intron 25.0%
!!! TACTGACTTATTGTTAATAG+GGG + chr1_4:52266667-52266686 Msa0169140:intron 25.0%
! ATAATACATACAACAGAAAC+TGG + chr1_4:52266993-52267012 Msa0169140:CDS 25.0%
!!! CATAGTTTTGAATACTGTAT+TGG + chr1_4:52267748-52267767 Msa0169140:intron 25.0%
! TCAGTCAGAAATTTCTTAAT+AGG + chr1_4:52267820-52267839 Msa0169140:intron 25.0%
!! GTGTATTTAAGGTTTAAAAC+AGG - chr1_4:52268311-52268330 None:intergenic 25.0%
! TATGTGAATCAATAAACTCA+AGG + chr1_4:52268616-52268635 Msa0169140:intron 25.0%
! AATTTGCATGAACGATTAAA+GGG + chr1_4:52269029-52269048 Msa0169140:intron 25.0%
!!! TATAGTGGTAGAAAAGTATT+TGG + chr1_4:52269134-52269153 Msa0169140:intron 25.0%
!!! ATAGTGGTAGAAAAGTATTT+GGG + chr1_4:52269135-52269154 Msa0169140:intron 25.0%
!! AGTTGATTAAACCCTTTTTA+AGG + chr1_4:52269532-52269551 Msa0169140:intron 25.0%
!! GTTGATTAAACCCTTTTTAA+GGG + chr1_4:52269533-52269552 Msa0169140:intron 25.0%
!! TTGAAAGTCTATTTCTTTGT+TGG + chr1_4:52269613-52269632 Msa0169140:intron 25.0%
! CCATAGTTTCAATAATTTGA+GGG + chr1_4:52269656-52269675 Msa0169140:intron 25.0%
! TTAAAAAAAGAGAGACAACT+TGG + chr1_4:52269982-52270001 Msa0169140:CDS 25.0%
! TCATTACATGGAAACATAAA+GGG - chr1_4:52270372-52270391 None:intergenic 25.0%
!!! TGATGAATTTAGTTTGAATG+AGG + chr1_4:52270575-52270594 Msa0169140:CDS 25.0%
!!! GATGAATTTAGTTTGAATGA+GGG + chr1_4:52270576-52270595 Msa0169140:CDS 25.0%
! TTATTCTCTGTTGAAATCAT+CGG - chr1_4:52271422-52271441 None:intergenic 25.0%
! CTATCAATATGATCTAAATG+AGG - chr1_4:52272056-52272075 None:intergenic 25.0%
! TTTATTCATGTTTCAGTGAT+AGG + chr1_4:52272110-52272129 Msa0169140:intron 25.0%
! TCACTATTCAAATTCAACAA+CGG - chr1_4:52272733-52272752 None:intergenic 25.0%
! TTCTCGATATTTGTCTATTT+AGG + chr1_4:52272784-52272803 Msa0169140:intron 25.0%
! GATGACAATAATAATACACA+TGG - chr1_4:52272845-52272864 None:intergenic 25.0%
! ACTAGCTGTTATAGTTTATA+TGG + chr1_4:52272895-52272914 Msa0169140:intron 25.0%
! AATATTGACAATGAGTGTTT+AGG + chr1_4:52273142-52273161 Msa0169140:intron 25.0%
! AAATGATTCTATACTCCTTA+TGG - chr1_4:52273176-52273195 None:intergenic 25.0%
! ATTTATCAAGACCAACAATT+TGG + chr1_4:52273198-52273217 Msa0169140:intron 25.0%
!!! TTAGTGTTTTTTATGATTGG+GGG - chr1_4:52273300-52273319 None:intergenic 25.0%
!!! CTTAGTGTTTTTTATGATTG+GGG - chr1_4:52273301-52273320 None:intergenic 25.0%
! CTTGTAATCTTAAGATTCTA+TGG - chr1_4:52273663-52273682 None:intergenic 25.0%
! CATAGAATCTTAAGATTACA+AGG + chr1_4:52273661-52273680 Msa0169140:intron 25.0%
! TGTGATATAAACTACATTGT+TGG - chr1_4:52273722-52273741 None:intergenic 25.0%
!!! TTTTAGAAATAGGGTCAATT+TGG - chr1_4:52273924-52273943 None:intergenic 25.0%
!!! AAATTGATTTTAGGGCATTT+TGG + chr1_4:52273969-52273988 Msa0169140:intron 25.0%
!!! AATTGATTTTAGGGCATTTT+GGG + chr1_4:52273970-52273989 Msa0169140:intron 25.0%
!!! TTCCTCTATCTTTTGTTTTT+TGG + chr1_4:52274098-52274117 Msa0169140:intron 25.0%
!! ATACTGGTAACAATGAATTT+TGG + chr1_4:52274737-52274756 Msa0169140:intron 25.0%
!!! TATTTTTGAGCTTTTATGAG+TGG + chr1_4:52274800-52274819 Msa0169140:intron 25.0%
! GTTATTAAAATTCTGTGCAA+AGG + chr1_4:52274935-52274954 Msa0169140:intron 25.0%
! AATGAAAATTCTCCATAACA+AGG - chr1_4:52275000-52275019 None:intergenic 25.0%
! ATGAGATCGTTAATGTTATA+TGG + chr1_4:52275072-52275091 Msa0169140:intron 25.0%
!! CATTATTGTACTAGTATTGA+GGG - chr1_4:52275211-52275230 None:intergenic 25.0%
! CTCAATACTAGTACAATAAT+GGG + chr1_4:52275210-52275229 Msa0169140:intron 25.0%
!! CTGCATATTTTCTTTACATT+TGG + chr1_4:52275433-52275452 Msa0169140:intron 25.0%
!! TACATTTGGTATTGAATTAC+CGG + chr1_4:52275447-52275466 Msa0169140:intron 25.0%
!! TCTACGATTAAATAGTGTTT+TGG - chr1_4:52275747-52275766 None:intergenic 25.0%
! GATAGTTATTGAATGGTTAT+GGG - chr1_4:52276067-52276086 None:intergenic 25.0%
! ATTATGGGATAGTTATTGAA+TGG - chr1_4:52276074-52276093 None:intergenic 25.0%
! TGTCAGTTATGTTTATTGTT+AGG - chr1_4:52276114-52276133 None:intergenic 25.0%
! ATAAATTCAAAGCTACACTT+TGG - chr1_4:52276736-52276755 None:intergenic 25.0%
!!! ATGTAGTGTTATTTTTCTTC+TGG + chr1_4:52276776-52276795 Msa0169140:intron 25.0%
!!! TTATTTTTCTTCTGGAATCT+GGG + chr1_4:52276784-52276803 Msa0169140:intron 25.0%
! AACATCCAAATATATGCATA+TGG - chr1_4:52276905-52276924 None:intergenic 25.0%
! TATGCATATATTTGGATGTT+TGG + chr1_4:52276905-52276924 Msa0169140:intron 25.0%
! TGATTCAGTTTCAAGATTAT+CGG - chr1_4:52276957-52276976 None:intergenic 25.0%
!! ATCTATTCTTTCTTCTCTTT+TGG - chr1_4:52277088-52277107 None:intergenic 25.0%
! AACTATATAAATCCAATTCC+CGG - chr1_4:52277446-52277465 None:intergenic 25.0%
! CTTCTATAATTGATAAACAC+AGG + chr1_4:52277789-52277808 Msa0169140:CDS 25.0%
!!! CTCTAGAATTAAATACAGTA+TGG - chr1_4:52278075-52278094 None:intergenic 25.0%
! CATACTGTATTTAATTCTAG+AGG + chr1_4:52278073-52278092 Msa0169140:CDS 25.0%
!! AATCAGTTTTCTTTTGTTCA+TGG + chr1_4:52278451-52278470 Msa0169140:CDS 25.0%
!! ATCAGTTTTCTTTTGTTCAT+GGG + chr1_4:52278452-52278471 Msa0169140:CDS 25.0%
! ATCAATTATTCCAATCTTAC+CGG - chr1_4:52278647-52278666 None:intergenic 25.0%
!!! TTAAGCTTTTTTTATTGGGT+AGG + chr1_4:52278718-52278737 Msa0169140:intron 25.0%
! TAGAGGAAAAATAATGGTAA+GGG - chr1_4:52278920-52278939 None:intergenic 25.0%
! ATAGAGGAAAAATAATGGTA+AGG - chr1_4:52278921-52278940 None:intergenic 25.0%
! TCATGATAGAGGAAAAATAA+TGG - chr1_4:52278926-52278945 None:intergenic 25.0%
!! CATTAATTTTCCAATGTTGA+AGG - chr1_4:52278978-52278997 None:intergenic 25.0%
! CTTCAACATTGGAAAATTAA+TGG + chr1_4:52278976-52278995 Msa0169140:intron 25.0%
!! GTACTGATCTAAATTCTATA+AGG - chr1_4:52279432-52279451 None:intergenic 25.0%
! CTGAAATATATAATCGTAGT+TGG + chr1_4:52279675-52279694 Msa0169140:three_prime_UTR 25.0%
!! TACATCATTATTTTCTTAGC+CGG - chr1_4:52279776-52279795 None:intergenic 25.0%
!! AAGGCATTGAATTGAGATAT+TGG - chr1_4:52264301-52264320 None:intergenic 30.0%
AATATGCCTATGGAATTGAA+AGG - chr1_4:52264320-52264339 None:intergenic 30.0%
! CTAGTTCTTGCTAAAGTTAA+AGG + chr1_4:52264504-52264523 Msa0169140:CDS 30.0%
!!! TATGTTTTTGGATTGCATGT+TGG + chr1_4:52264620-52264639 Msa0169140:intron 30.0%
! TTGGTGGAGTTTAGAATTAT+TGG + chr1_4:52264639-52264658 Msa0169140:intron 30.0%
! GTTTGGTAATTGTGATGAAT+TGG + chr1_4:52264938-52264957 Msa0169140:intron 30.0%
TGTGATGAATTGGATTGAAA+CGG + chr1_4:52264948-52264967 Msa0169140:intron 30.0%
! TGATTATCAATATTTTCCCC+AGG - chr1_4:52265024-52265043 None:intergenic 30.0%
TAATCAGTTGACTATATGCT+TGG + chr1_4:52265038-52265057 Msa0169140:intron 30.0%
! GGGTAAACAAATGATAATGA+TGG + chr1_4:52265107-52265126 Msa0169140:intron 30.0%
TAAATAGTGAACTACATGCT+TGG + chr1_4:52265132-52265151 Msa0169140:intron 30.0%
! CTTGGTAATCCTGAAATTTA+GGG + chr1_4:52265150-52265169 Msa0169140:intron 30.0%
! ATCTTCTATGAGACTTTTTG+GGG + chr1_4:52265184-52265203 Msa0169140:intron 30.0%
GGGTAAGCAAATGATAATAA+TGG + chr1_4:52265205-52265224 Msa0169140:intron 30.0%
TTTGTCTATGAAACAAGCAT+AGG - chr1_4:52265347-52265366 None:intergenic 30.0%
CTTCAAGTCAAACAAAGATT+TGG - chr1_4:52265508-52265527 None:intergenic 30.0%
! CAAAAAGTAGTTTTTGTGTC+TGG + chr1_4:52265531-52265550 Msa0169140:intron 30.0%
! TTTTGTTGATGCAAGAGAAT+TGG + chr1_4:52265689-52265708 Msa0169140:intron 30.0%
AACAAACTCGAAAAGTCAAA+TGG - chr1_4:52265776-52265795 None:intergenic 30.0%
ATTCACATTTCGCTTAAACT+AGG - chr1_4:52265985-52266004 None:intergenic 30.0%
CAATTGTGCACACTAAAAAA+GGG - chr1_4:52266157-52266176 None:intergenic 30.0%
ACAATTGTGCACACTAAAAA+AGG - chr1_4:52266158-52266177 None:intergenic 30.0%
!! TTCGTAGTTTTACCTAAGTA+TGG + chr1_4:52266196-52266215 Msa0169140:intron 30.0%
! CGTAATCTTTTACCATACTT+AGG - chr1_4:52266211-52266230 None:intergenic 30.0%
AGTCATCATACAATACATCA+GGG + chr1_4:52266235-52266254 Msa0169140:intron 30.0%
ACATATAAACTGTATCCTAC+TGG - chr1_4:52266384-52266403 None:intergenic 30.0%
TACTACTACCTCATAAAAGT+AGG - chr1_4:52266488-52266507 None:intergenic 30.0%
!!! ACATGGTTTTAATAAGCTGA+AGG - chr1_4:52266639-52266658 None:intergenic 30.0%
TTAAGTGAACTCATACTTGT+AGG + chr1_4:52266897-52266916 Msa0169140:intron 30.0%
TCTAACTGAATAACTAGCAA+CGG + chr1_4:52267427-52267446 Msa0169140:intron 30.0%
AACATAGATCACTCTTGATA+TGG + chr1_4:52267700-52267719 Msa0169140:intron 30.0%
TCATCATGGCAATTTATATG+AGG - chr1_4:52267796-52267815 None:intergenic 30.0%
!! TTCTGACTGATTTTTCATCA+TGG - chr1_4:52267810-52267829 None:intergenic 30.0%
GCTATGAAAAGTTACAAGTT+AGG - chr1_4:52267981-52268000 None:intergenic 30.0%
! TTCTAACCAATGTTTTCCAA+CGG + chr1_4:52268101-52268120 Msa0169140:intron 30.0%
! ATCCTATTTGAAGTTGTTGT+TGG - chr1_4:52268256-52268275 None:intergenic 30.0%
! ATTTAAGGTTTAAAACAGGC+TGG - chr1_4:52268307-52268326 None:intergenic 30.0%
AAGAAAGTTGGGTGTATTTA+AGG - chr1_4:52268322-52268341 None:intergenic 30.0%
TAAATACACCCAACTTTCTT+TGG + chr1_4:52268322-52268341 Msa0169140:intron 30.0%
AAAATCTTCTCGGTAAATGA+GGG - chr1_4:52268392-52268411 None:intergenic 30.0%
TTCTCTTTCCAAAATCTTCT+CGG - chr1_4:52268402-52268421 None:intergenic 30.0%
! AAACTTTTCTGTTAGCAGAT+TGG - chr1_4:52268643-52268662 None:intergenic 30.0%
TCTCTCTGGCATAATATATT+TGG + chr1_4:52268823-52268842 Msa0169140:intron 30.0%
!!! TTTTGAAGAGTACTAAAGCT+AGG - chr1_4:52268853-52268872 None:intergenic 30.0%
TCTTCAAAATGTACTCATGA+TGG + chr1_4:52268864-52268883 Msa0169140:intron 30.0%
CTTCAAAATGTACTCATGAT+GGG + chr1_4:52268865-52268884 Msa0169140:intron 30.0%
TAAACTGCACTTTGTTAAGA+AGG - chr1_4:52268911-52268930 None:intergenic 30.0%
CTTAACAAAGTGCAGTTTAA+CGG + chr1_4:52268912-52268931 Msa0169140:intron 30.0%
CAATTTGCATGAACGATTAA+AGG + chr1_4:52269028-52269047 Msa0169140:intron 30.0%
TTATTAGAATTCCAATTGGG+TGG + chr1_4:52269075-52269094 Msa0169140:intron 30.0%
TATTAGAATTCCAATTGGGT+GGG + chr1_4:52269076-52269095 Msa0169140:intron 30.0%
AGGGAAAAAGTTGTTTATAG+TGG + chr1_4:52269119-52269138 Msa0169140:intron 30.0%
TTGCCATCAAATGATAAGTA+AGG + chr1_4:52269478-52269497 Msa0169140:intron 30.0%
CAACCTTACTTATCATTTGA+TGG - chr1_4:52269484-52269503 None:intergenic 30.0%
CATCAAATGATAAGTAAGGT+TGG + chr1_4:52269482-52269501 Msa0169140:intron 30.0%
AAGGTTGGATTTGATTGAAT+TGG + chr1_4:52269497-52269516 Msa0169140:intron 30.0%
!! ATTAAACCCTTTTTAAGGGA+AGG + chr1_4:52269537-52269556 Msa0169140:intron 30.0%
TAGTTTAAACCAACCTGATA+GGG + chr1_4:52269563-52269582 Msa0169140:intron 30.0%
GCCATAGTTTCAATAATTTG+AGG + chr1_4:52269655-52269674 Msa0169140:intron 30.0%
CCCTCAAATTATTGAAACTA+TGG - chr1_4:52269659-52269678 None:intergenic 30.0%
ATGTAAGGTATAATGTGCAA+GGG - chr1_4:52269820-52269839 None:intergenic 30.0%
GAAGATTTCATAGGTAAAGT+AGG - chr1_4:52270102-52270121 None:intergenic 30.0%
TCGGAATTTGAAGATTTCAT+AGG - chr1_4:52270111-52270130 None:intergenic 30.0%
GTCATTACATGGAAACATAA+AGG - chr1_4:52270373-52270392 None:intergenic 30.0%
TTAGAAGGAATAAACGTCTT+AGG + chr1_4:52270445-52270464 Msa0169140:CDS 30.0%
!!! TGATTTTGATTCATCTGCTT+TGG + chr1_4:52270494-52270513 Msa0169140:CDS 30.0%
AGGCCTTGATCTTAAAATAA+AGG + chr1_4:52270668-52270687 Msa0169140:CDS 30.0%
GGCCTTGATCTTAAAATAAA+GGG + chr1_4:52270669-52270688 Msa0169140:CDS 30.0%
!!! CACCCTTTATTTTAAGATCA+AGG - chr1_4:52270674-52270693 None:intergenic 30.0%
TGATCTTAAAATAAAGGGTG+TGG + chr1_4:52270674-52270693 Msa0169140:CDS 30.0%
AGAAGAAAAGAAACCCAAAT+AGG + chr1_4:52270703-52270722 Msa0169140:CDS 30.0%
TGAAGGAGAAACATTATTCA+TGG - chr1_4:52271057-52271076 None:intergenic 30.0%
!!! TACACCATGTTTTGAAAATC+AGG + chr1_4:52271085-52271104 Msa0169140:CDS 30.0%
! CAAACCTGATTTTCAAAACA+TGG - chr1_4:52271092-52271111 None:intergenic 30.0%
! TGAAGAACTTAGTGATTTTG+TGG + chr1_4:52271529-52271548 Msa0169140:CDS 30.0%
TAATGTGGATTTGAAAACTC+AGG + chr1_4:52271565-52271584 Msa0169140:CDS 30.0%
! AATATTTGGTGGTAATGACA+GGG - chr1_4:52271660-52271679 None:intergenic 30.0%
TCATTACCACCAAATATTGA+AGG + chr1_4:52271662-52271681 Msa0169140:CDS 30.0%
ATATTGCCTTCAATATTTGG+TGG - chr1_4:52271671-52271690 None:intergenic 30.0%
! TAGTGGCTTTTTATAGTTCT+TGG + chr1_4:52271896-52271915 Msa0169140:intron 30.0%
! ATCATATTGATAGTTTGCCA+TGG + chr1_4:52272063-52272082 Msa0169140:intron 30.0%
GTAAAAGAGGTAAAATGTGA+AGG + chr1_4:52272232-52272251 Msa0169140:CDS 30.0%
AGTAGTAATATCCTTCACAA+TGG + chr1_4:52272412-52272431 Msa0169140:CDS 30.0%
AACTCAACAATCAAGATCAA+TGG + chr1_4:52272516-52272535 Msa0169140:CDS 30.0%
ACTCAACAATCAAGATCAAT+GGG + chr1_4:52272517-52272536 Msa0169140:CDS 30.0%
! AAAAGGACAAAGGAAAGTAT+TGG + chr1_4:52272601-52272620 Msa0169140:CDS 30.0%
ACAAATATCGAGAATGTAAG+TGG - chr1_4:52272778-52272797 None:intergenic 30.0%
!!! TAGTGTTTTTTATGATTGGG+GGG - chr1_4:52273299-52273318 None:intergenic 30.0%
GTCTTCTGCAATATTATCAA+TGG + chr1_4:52273363-52273382 Msa0169140:intron 30.0%
CAAGAATGCTGTAATGAAAA+GGG - chr1_4:52273415-52273434 None:intergenic 30.0%
AAAATATAGTTCAAAGGGTG+TGG + chr1_4:52273590-52273609 Msa0169140:intron 30.0%
AGATTACAAGGAAAAAAACG+AGG + chr1_4:52273673-52273692 Msa0169140:intron 30.0%
!!! ATTGATTTTAGGGCATTTTG+GGG + chr1_4:52273971-52273990 Msa0169140:intron 30.0%
CATAAAACAAGAGAAAACAG+AGG - chr1_4:52274050-52274069 None:intergenic 30.0%
!!! CTCTGTTTTCTCTTGTTTTA+TGG + chr1_4:52274048-52274067 Msa0169140:intron 30.0%
CACCAAAAAACAAAAGATAG+AGG - chr1_4:52274103-52274122 None:intergenic 30.0%
AAAAGTGATATAGCGTAAAG+CGG - chr1_4:52274268-52274287 None:intergenic 30.0%
!! TTTACGCTATATCACTTTTG+TGG + chr1_4:52274269-52274288 Msa0169140:intron 30.0%
TGTCCAAAAAACATCAGATA+GGG - chr1_4:52274406-52274425 None:intergenic 30.0%
TTGTCCAAAAAACATCAGAT+AGG - chr1_4:52274407-52274426 None:intergenic 30.0%
!!! CTGATGTTTTTTGGACAATT+TGG + chr1_4:52274409-52274428 Msa0169140:intron 30.0%
TTTATGAGTGGTACTATTTG+TGG + chr1_4:52274812-52274831 Msa0169140:intron 30.0%
CTTCATGTATCATAGAAAGA+TGG + chr1_4:52274897-52274916 Msa0169140:intron 30.0%
AAATATCATCGCTCAAATCA+TGG + chr1_4:52275044-52275063 Msa0169140:intron 30.0%
AAATCCATTTCATGGTCTAA+GGG - chr1_4:52275126-52275145 None:intergenic 30.0%
AAAATCCATTTCATGGTCTA+AGG - chr1_4:52275127-52275146 None:intergenic 30.0%
CCATTATTGTACTAGTATTG+AGG - chr1_4:52275212-52275231 None:intergenic 30.0%
CCTCAATACTAGTACAATAA+TGG + chr1_4:52275209-52275228 Msa0169140:intron 30.0%
! ATTTTTACTTGCAACTACAG+AGG + chr1_4:52275276-52275295 Msa0169140:intron 30.0%
! TTTTTACTTGCAACTACAGA+GGG + chr1_4:52275277-52275296 Msa0169140:intron 30.0%
!!! CTGTACTGTTTCCTTATTTT+TGG + chr1_4:52275582-52275601 Msa0169140:intron 30.0%
!! TCGTAGAAACTGACTTTTAT+TGG + chr1_4:52275760-52275779 Msa0169140:intron 30.0%
!! TAGAAACTGACTTTTATTGG+TGG + chr1_4:52275763-52275782 Msa0169140:intron 30.0%
CAGAATTCACACATAAACTA+AGG + chr1_4:52275834-52275853 Msa0169140:intron 30.0%
GGATAGTTATTGAATGGTTA+TGG - chr1_4:52276068-52276087 None:intergenic 30.0%
AATCTCTTGGATTCTTGTAA+GGG - chr1_4:52276239-52276258 None:intergenic 30.0%
TGAACATGTGTTTATATGTG+GGG - chr1_4:52276363-52276382 None:intergenic 30.0%
CTGAACATGTGTTTATATGT+GGG - chr1_4:52276364-52276383 None:intergenic 30.0%
GACTCTCAAATTTCTTAGAT+AGG - chr1_4:52276440-52276459 None:intergenic 30.0%
TCTAAGAAATTTGAGAGTCT+TGG + chr1_4:52276441-52276460 Msa0169140:intron 30.0%
ACATACATGTTCCAAATTTG+AGG - chr1_4:52276760-52276779 None:intergenic 30.0%
!!! GTTATTTTTCTTCTGGAATC+TGG + chr1_4:52276783-52276802 Msa0169140:intron 30.0%
ATGGCATCAAATAAAAGACA+TGG - chr1_4:52276886-52276905 None:intergenic 30.0%
TGATGCCATATGCATATATT+TGG + chr1_4:52276897-52276916 Msa0169140:intron 30.0%
TATACTAAACAAACATCACC+TGG - chr1_4:52277159-52277178 None:intergenic 30.0%
!!! TTTTATAGGTTTTAAGGCTG+TGG + chr1_4:52277376-52277395 Msa0169140:intron 30.0%
TTATATAGTTCAGTTTCTGC+AGG + chr1_4:52277456-52277475 Msa0169140:intron 30.0%
TTCTATATTATCATCACTGC+TGG + chr1_4:52277593-52277612 Msa0169140:intron 30.0%
TCTATATTATCATCACTGCT+GGG + chr1_4:52277594-52277613 Msa0169140:intron 30.0%
!! TCATTTTCCAATGTTGATAG+AGG + chr1_4:52277884-52277903 Msa0169140:CDS 30.0%
GAATTAAATACAGTATGGCA+TGG - chr1_4:52278070-52278089 None:intergenic 30.0%
ACCAAGAGTTAACAACTAAT+GGG + chr1_4:52278161-52278180 Msa0169140:intron 30.0%
TCAGAATGTCGATAATTTAC+TGG - chr1_4:52278373-52278392 None:intergenic 30.0%
GTAAATTATCGACATTCTGA+TGG + chr1_4:52278373-52278392 Msa0169140:CDS 30.0%
!! ACAAAAGAAAACTGATTCGA+CGG - chr1_4:52278448-52278467 None:intergenic 30.0%
! TCAGTTTTCTTTTGTTCATG+GGG + chr1_4:52278453-52278472 Msa0169140:CDS 30.0%
ATATGATTATCGAGAGAGAT+GGG + chr1_4:52278603-52278622 Msa0169140:CDS 30.0%
TCAATTATTCCAATCTTACC+GGG - chr1_4:52278646-52278665 None:intergenic 30.0%
!!! ATTGATGCTTATTTTGATGG+TGG + chr1_4:52278661-52278680 Msa0169140:intron 30.0%
AGAGGAAAAATAATGGTAAG+GGG - chr1_4:52278919-52278938 None:intergenic 30.0%
GGTGTAACCTTAACTTATTT+AGG + chr1_4:52279356-52279375 Msa0169140:three_prime_UTR 30.0%
GACACAACCTAAATAAGTTA+AGG - chr1_4:52279366-52279385 None:intergenic 30.0%
TAAATTATAGAATTTGGCGG+TGG - chr1_4:52279397-52279416 None:intergenic 30.0%
ACATTTCAGTGAATATTTCC+TGG + chr1_4:52279464-52279483 Msa0169140:three_prime_UTR 30.0%
TTCCTGGAATTGTTAATTGA+AGG + chr1_4:52279480-52279499 Msa0169140:three_prime_UTR 30.0%
TCCTGGAATTGTTAATTGAA+GGG + chr1_4:52279481-52279500 Msa0169140:three_prime_UTR 30.0%
! TGAGGTAATGCACATATTTT+TGG + chr1_4:52279730-52279749 Msa0169140:three_prime_UTR 30.0%
! GAGGTAATGCACATATTTTT+GGG + chr1_4:52279731-52279750 Msa0169140:three_prime_UTR 30.0%
CTTTCGCTAAAAGAATCAAA+CGG - chr1_4:52279816-52279835 None:intergenic 30.0%
!!! TACTGATTTTGAAGACTTTG+GGG - chr1_4:52279850-52279869 None:intergenic 30.0%
!!! GTACTGATTTTGAAGACTTT+GGG - chr1_4:52279851-52279870 None:intergenic 30.0%
!!! AGTACTGATTTTGAAGACTT+TGG - chr1_4:52279852-52279871 None:intergenic 30.0%
! GATTTTGTGTTAAACGCAAG+TGG - chr1_4:52264206-52264225 None:intergenic 35.0%
TCTCTCTCTCTCTCTAAATT+AGG + chr1_4:52264238-52264257 Msa0169140:intron 35.0%
CTCTCTCTCTCTCTAAATTA+GGG + chr1_4:52264239-52264258 Msa0169140:intron 35.0%
TCAATGCCTTTCAATTCCAT+AGG + chr1_4:52264311-52264330 Msa0169140:five_prime_UTR 35.0%
AACTGTGTTGAATATGCCTA+TGG - chr1_4:52264330-52264349 None:intergenic 35.0%
AAATTGAATAGCAGTTACCG+TGG - chr1_4:52264547-52264566 None:intergenic 35.0%
TGTGGATCCTAGTTTATTCA+TGG + chr1_4:52264822-52264841 Msa0169140:intron 35.0%
GTGGATCCTAGTTTATTCAT+GGG + chr1_4:52264823-52264842 Msa0169140:intron 35.0%
GCAAAACCCATGAATAAACT+AGG - chr1_4:52264832-52264851 None:intergenic 35.0%
ATGGTTACTGTAAACTCAAC+TGG + chr1_4:52264884-52264903 Msa0169140:intron 35.0%
TGGTTACTGTAAACTCAACT+GGG + chr1_4:52264885-52264904 Msa0169140:intron 35.0%
AGTGATTGTGAACTCAAATC+AGG - chr1_4:52264996-52265015 None:intergenic 35.0%
! GCTTGGTAATCCTGAAATTT+AGG + chr1_4:52265149-52265168 Msa0169140:intron 35.0%
! TCTTCTATGAGACTTTTTGG+GGG + chr1_4:52265185-52265204 Msa0169140:intron 35.0%
CTTCAACTCAACTTTCAATC+CGG + chr1_4:52265425-52265444 Msa0169140:intron 35.0%
TGAATGCAAACACACATTGA+TGG - chr1_4:52265455-52265474 None:intergenic 35.0%
TCAATGTGTGTTTGCATTCA+TGG + chr1_4:52265455-52265474 Msa0169140:intron 35.0%
CAAGTCAAACAAAGATTTGG+AGG - chr1_4:52265505-52265524 None:intergenic 35.0%
AAGCACTTTCTTCAAATCAG+TGG - chr1_4:52265838-52265857 None:intergenic 35.0%
CTGTTAGGCAGTGTTAAATA+AGG + chr1_4:52266042-52266061 Msa0169140:intron 35.0%
TTATATCTCGGAGCTTAACT+TGG + chr1_4:52266084-52266103 Msa0169140:intron 35.0%
TATATCTCGGAGCTTAACTT+GGG + chr1_4:52266085-52266104 Msa0169140:intron 35.0%
CTTGGGTGATATGCTTATTA+TGG + chr1_4:52266102-52266121 Msa0169140:intron 35.0%
GAGTCATCATACAATACATC+AGG + chr1_4:52266234-52266253 Msa0169140:intron 35.0%
GTCATCATACAATACATCAG+GGG + chr1_4:52266236-52266255 Msa0169140:intron 35.0%
! ACCAGATTTAGAATACCAGT+AGG + chr1_4:52266366-52266385 Msa0169140:intron 35.0%
TCCTACTGGTATTCTAAATC+TGG - chr1_4:52266370-52266389 None:intergenic 35.0%
!! ATTGTTGGCCTACTTTTATG+AGG + chr1_4:52266477-52266496 Msa0169140:intron 35.0%
GGTAGTAGTAGAAAATACGA+TGG + chr1_4:52266498-52266517 Msa0169140:intron 35.0%
AAGTCAGTAACGTTGTTACA+TGG - chr1_4:52266656-52266675 None:intergenic 35.0%
AAGACCCAATCAATAACCTA+AGG - chr1_4:52266695-52266714 None:intergenic 35.0%
TCTAACTGTCAATGCTCAAA+AGG - chr1_4:52266765-52266784 None:intergenic 35.0%
GTTCTGTTAGTTGTTCTGTT+AGG - chr1_4:52266969-52266988 None:intergenic 35.0%
ACTGTGTGAATTTATGCAGT+TGG - chr1_4:52267021-52267040 None:intergenic 35.0%
!! TCAGGTATCGACTTCTAATA+TGG - chr1_4:52267254-52267273 None:intergenic 35.0%
GAATTACAACTTAGCACTGT+TGG - chr1_4:52267409-52267428 None:intergenic 35.0%
TGAGCTTATGTATCTTGTTC+TGG - chr1_4:52267472-52267491 None:intergenic 35.0%
TGTCAAATCGTTACTGCATT+TGG + chr1_4:52267622-52267641 Msa0169140:intron 35.0%
TTCAATACTGTTGCCTGAAA+TGG + chr1_4:52267897-52267916 Msa0169140:intron 35.0%
CAAGTTAGGCTATCAAAAAG+TGG - chr1_4:52267967-52267986 None:intergenic 35.0%
! GTTCTTTTGTTGACCCAATA+TGG + chr1_4:52268067-52268086 Msa0169140:intron 35.0%
TGCCAACAACAACTTCAAAT+AGG + chr1_4:52268251-52268270 Msa0169140:intron 35.0%
AAATCTTCTCGGTAAATGAG+GGG - chr1_4:52268391-52268410 None:intergenic 35.0%
CAAAATCTTCTCGGTAAATG+AGG - chr1_4:52268393-52268412 None:intergenic 35.0%
! CTCATTTACCGAGAAGATTT+TGG + chr1_4:52268391-52268410 Msa0169140:intron 35.0%
TTACAGTGTTAGTGGCATTT+AGG - chr1_4:52268781-52268800 None:intergenic 35.0%
! AGAAACAAAAAGGAAGTGTG+TGG - chr1_4:52268806-52268825 None:intergenic 35.0%
!! ACTTCCTTTTTGTTTCTCTC+TGG + chr1_4:52268809-52268828 Msa0169140:intron 35.0%
TATGCCAGAGAGAAACAAAA+AGG - chr1_4:52268816-52268835 None:intergenic 35.0%
TAACTATTTACCCACCCAAT+TGG - chr1_4:52269089-52269108 None:intergenic 35.0%
!!! ACTTGAGGTTTTGAACTGAT+TGG + chr1_4:52269380-52269399 Msa0169140:intron 35.0%
!!! CTTGAGGTTTTGAACTGATT+GGG + chr1_4:52269381-52269400 Msa0169140:intron 35.0%
!!! TTGAGGTTTTGAACTGATTG+GGG + chr1_4:52269382-52269401 Msa0169140:intron 35.0%
CTACTTCCTTCCCTTAAAAA+GGG - chr1_4:52269546-52269565 None:intergenic 35.0%
ACTACTTCCTTCCCTTAAAA+AGG - chr1_4:52269547-52269566 None:intergenic 35.0%
GTAGTTTAAACCAACCTGAT+AGG + chr1_4:52269562-52269581 Msa0169140:intron 35.0%
! TACTATCGTTTTACCCTATC+AGG - chr1_4:52269579-52269598 None:intergenic 35.0%
TAGGGTAAAACGATAGTATC+AGG + chr1_4:52269581-52269600 Msa0169140:intron 35.0%
! CTATTTCTTTGTTGGAGATC+TGG + chr1_4:52269621-52269640 Msa0169140:intron 35.0%
TCAATAATTTGAGGGCCTTA+TGG + chr1_4:52269664-52269683 Msa0169140:intron 35.0%
GATGTAAGGTATAATGTGCA+AGG - chr1_4:52269821-52269840 None:intergenic 35.0%
!!! GAGAGATTGTTTTTTCTCCT+CGG - chr1_4:52269893-52269912 None:intergenic 35.0%
! TCCTTGTTGTATGAGTTGAA+TGG - chr1_4:52270054-52270073 None:intergenic 35.0%
! AATTCCGATATTGATAGCCA+TGG + chr1_4:52270123-52270142 Msa0169140:CDS 35.0%
! ATTCCGATATTGATAGCCAT+GGG + chr1_4:52270124-52270143 Msa0169140:CDS 35.0%
! AGATGAATCTCATGATAACG+AGG + chr1_4:52270188-52270207 Msa0169140:CDS 35.0%
! GAATGTTGCTTCTGTACATT+CGG + chr1_4:52270230-52270249 Msa0169140:CDS 35.0%
TTTCGAGAAGAGTAAGTTAG+TGG - chr1_4:52270261-52270280 None:intergenic 35.0%
TACATGGAAACATAAAGGGT+TGG - chr1_4:52270368-52270387 None:intergenic 35.0%
ATGTTTCCATGTAATGACAG+TGG + chr1_4:52270375-52270394 Msa0169140:CDS 35.0%
TTCTTTCCACTGTCATTACA+TGG - chr1_4:52270384-52270403 None:intergenic 35.0%
AAAGAAACCCAAATAGGAAG+AGG + chr1_4:52270709-52270728 Msa0169140:CDS 35.0%
AAGAAACCCAAATAGGAAGA+GGG + chr1_4:52270710-52270729 Msa0169140:CDS 35.0%
GGAATTTCTGCAAATGTTCT+GGG - chr1_4:52270808-52270827 None:intergenic 35.0%
AATAGCATTCTACATACTCC+AGG + chr1_4:52270927-52270946 Msa0169140:CDS 35.0%
ATAGCATTCTACATACTCCA+GGG + chr1_4:52270928-52270947 Msa0169140:CDS 35.0%
CATGGTGTACAATTCTTTGA+AGG - chr1_4:52271074-52271093 None:intergenic 35.0%
GATAGAAGATATACAGCATG+TGG - chr1_4:52271273-52271292 None:intergenic 35.0%
TGATCATTAATAGCCACATC+TGG - chr1_4:52271305-52271324 None:intergenic 35.0%
GTGGCTATTAATGATCATGA+AGG + chr1_4:52271308-52271327 Msa0169140:CDS 35.0%
GCTATTAATGATCATGAAGG+TGG + chr1_4:52271311-52271330 Msa0169140:CDS 35.0%
ATTTGAAAACTCAGGTGCAT+GGG + chr1_4:52271573-52271592 Msa0169140:CDS 35.0%
! CAATATTTGGTGGTAATGAC+AGG - chr1_4:52271661-52271680 None:intergenic 35.0%
TGGAATAAACCTTCATTCTG+TGG + chr1_4:52271739-52271758 Msa0169140:CDS 35.0%
! TTTGAGGCGGATCAATATTA+GGG - chr1_4:52271793-52271812 None:intergenic 35.0%
!!! TTTTGAGGCGGATCAATATT+AGG - chr1_4:52271794-52271813 None:intergenic 35.0%
ATGACATGTAAGCTTAGTAG+TGG + chr1_4:52271879-52271898 Msa0169140:intron 35.0%
! ATATTGATAGTTTGCCATGG+TGG + chr1_4:52272066-52272085 Msa0169140:intron 35.0%
! CGTGACTGTTCTTTAATTTC+AGG + chr1_4:52272200-52272219 Msa0169140:intron 35.0%
ACATTGCAAATTGACGTGTT+TGG - chr1_4:52272379-52272398 None:intergenic 35.0%
CACCAGAAACAAACTTTATC+TGG + chr1_4:52272460-52272479 Msa0169140:CDS 35.0%
! GACCAGATAAAGTTTGTTTC+TGG - chr1_4:52272465-52272484 None:intergenic 35.0%
TGAAAGTAAGTATGGATCTG+AGG + chr1_4:52272492-52272511 Msa0169140:CDS 35.0%
!! TTGTACTTTGAAGCAATGCT+TGG + chr1_4:52272571-52272590 Msa0169140:CDS 35.0%
!! TGTACTTTGAAGCAATGCTT+GGG + chr1_4:52272572-52272591 Msa0169140:CDS 35.0%
AAAGTTTGGCATTGCAGATA+AGG + chr1_4:52272654-52272673 Msa0169140:CDS 35.0%
ATGGAAGACTCAGATTTCAT+GGG - chr1_4:52272826-52272845 None:intergenic 35.0%
!! GGTATTGGTACAAAAAGCAT+GGG + chr1_4:52272979-52272998 Msa0169140:intron 35.0%
ATTCACCTCGAGATCATATT+TGG - chr1_4:52273064-52273083 None:intergenic 35.0%
AAATATGATCTCGAGGTGAA+TGG + chr1_4:52273063-52273082 Msa0169140:intron 35.0%
!!! TTGTTTCTGCATCCCAATTT+TGG + chr1_4:52273100-52273119 Msa0169140:intron 35.0%
TGACAATGAGTGTTTAGGTA+TGG + chr1_4:52273147-52273166 Msa0169140:intron 35.0%
GTTTAGGTATGGATTCCATA+AGG + chr1_4:52273158-52273177 Msa0169140:intron 35.0%
TATCAAGACCAACAATTTGG+AGG + chr1_4:52273201-52273220 Msa0169140:intron 35.0%
ATCAAGACCAACAATTTGGA+GGG + chr1_4:52273202-52273221 Msa0169140:intron 35.0%
GAAAAACAGTATGATGAGTC+AGG - chr1_4:52273266-52273285 None:intergenic 35.0%
!!! AGTGTTTTTTATGATTGGGG+GGG - chr1_4:52273298-52273317 None:intergenic 35.0%
GCAAGAATGCTGTAATGAAA+AGG - chr1_4:52273416-52273435 None:intergenic 35.0%
! TTACAGCATTCTTGCTGTAT+AGG + chr1_4:52273421-52273440 Msa0169140:intron 35.0%
! CTTAAGATTCTATGGTGTTG+TGG - chr1_4:52273655-52273674 None:intergenic 35.0%
TGAACCATAGTAGTCAATAG+CGG + chr1_4:52273777-52273796 Msa0169140:intron 35.0%
! ACCAAATTGACTCTGTTGTA+TGG + chr1_4:52274003-52274022 Msa0169140:intron 35.0%
ACCATACAACAGAGTCAATT+TGG - chr1_4:52274007-52274026 None:intergenic 35.0%
TAAAGCGGTATGACAAATAG+CGG - chr1_4:52274253-52274272 None:intergenic 35.0%
TTGTCAATTGCAGATCAATG+TGG - chr1_4:52274323-52274342 None:intergenic 35.0%
GTCCAAAAAACATCAGATAG+GGG - chr1_4:52274405-52274424 None:intergenic 35.0%
TACAATGTGTTGTCGAATAG+TGG + chr1_4:52274555-52274574 Msa0169140:intron 35.0%
! TATAGCTCTCTCTAGTTTAG+AGG + chr1_4:52274579-52274598 Msa0169140:intron 35.0%
!! TATTGGTGTTGCATAGTGTT+GGG + chr1_4:52274648-52274667 Msa0169140:intron 35.0%
TTCCCTAAACTTTGACATAG+TGG + chr1_4:52274850-52274869 Msa0169140:intron 35.0%
AGCCACTATGTCAAAGTTTA+GGG - chr1_4:52274855-52274874 None:intergenic 35.0%
!! TTTGGTGTCTATCCTTGTTA+TGG + chr1_4:52274985-52275004 Msa0169140:intron 35.0%
! TTTTCATTGCATTATGCACC+TGG + chr1_4:52275012-52275031 Msa0169140:intron 35.0%
GATTTGAGCGATGATATTTC+TGG - chr1_4:52275043-52275062 None:intergenic 35.0%
TCACTTGTACTGTAGAGAAA+TGG + chr1_4:52275472-52275491 Msa0169140:intron 35.0%
ACTTTGGTCTCACTTCAATA+AGG - chr1_4:52275676-52275695 None:intergenic 35.0%
TTATTGAAGTGAGACCAAAG+TGG + chr1_4:52275675-52275694 Msa0169140:intron 35.0%
TATTGAAGTGAGACCAAAGT+GGG + chr1_4:52275676-52275695 Msa0169140:intron 35.0%
ACATTATAACATGCCCACTT+TGG - chr1_4:52275692-52275711 None:intergenic 35.0%
AAAGTGGGCATGTTATAATG+TGG + chr1_4:52275691-52275710 Msa0169140:intron 35.0%
AAGTGGGCATGTTATAATGT+GGG + chr1_4:52275692-52275711 Msa0169140:intron 35.0%
!! AAGCTGAAAGTGTTAGAAAC+TGG + chr1_4:52275719-52275738 Msa0169140:intron 35.0%
ACAGAATTACACACACCATT+TGG + chr1_4:52275807-52275826 Msa0169140:intron 35.0%
TGTGAATTCTGCATTCCAAA+TGG - chr1_4:52275825-52275844 None:intergenic 35.0%
GGAAAGAGTCTACTATTACA+AGG + chr1_4:52276176-52276195 Msa0169140:intron 35.0%
!! GACTCTAGAATTTCTTCGAT+AGG - chr1_4:52276207-52276226 None:intergenic 35.0%
!! TCGAAGAAATTCTAGAGTCT+TGG + chr1_4:52276208-52276227 Msa0169140:intron 35.0%
CAATCTCTTGGATTCTTGTA+AGG - chr1_4:52276240-52276259 None:intergenic 35.0%
CTTACAAGAATCCAAGAGAT+TGG + chr1_4:52276238-52276257 Msa0169140:intron 35.0%
! GTCTCTCTCTCTCTAAAAAA+GGG + chr1_4:52276260-52276279 Msa0169140:intron 35.0%
TTGGTCTCTCTTAGAAATTG+TGG + chr1_4:52276289-52276308 Msa0169140:intron 35.0%
TCTCTCTTAGAAATTGTGGT+TGG + chr1_4:52276293-52276312 Msa0169140:intron 35.0%
CTCTCTTAGAAATTGTGGTT+GGG + chr1_4:52276294-52276313 Msa0169140:intron 35.0%
GAACATGTGTTTATATGTGG+GGG - chr1_4:52276362-52276381 None:intergenic 35.0%
CCTGAACATGTGTTTATATG+TGG - chr1_4:52276365-52276384 None:intergenic 35.0%
CCACATATAAACACATGTTC+AGG + chr1_4:52276362-52276381 Msa0169140:intron 35.0%
TACCAAGATTTCGAATGCTT+GGG - chr1_4:52276472-52276491 None:intergenic 35.0%
ATACCAAGATTTCGAATGCT+TGG - chr1_4:52276473-52276492 None:intergenic 35.0%
!!! AAGGCATTTTATTTTGGGAC+TGG - chr1_4:52276510-52276529 None:intergenic 35.0%
AACTCAATGAAACTCCAATG+TGG - chr1_4:52276707-52276726 None:intergenic 35.0%
AAACTGAATCAAGTCTGCAT+CGG + chr1_4:52276966-52276985 Msa0169140:CDS 35.0%
! CAGTTTTCTCGAGGTTTAAA+AGG + chr1_4:52277025-52277044 Msa0169140:CDS 35.0%
! CTAAGATGTCTGATTTTTCC+AGG + chr1_4:52277138-52277157 Msa0169140:intron 35.0%
ACGATCATTAAGAACAGAGA+GGG + chr1_4:52277491-52277510 Msa0169140:CDS 35.0%
TACCCTCCATTTCTCTTATA+GGG - chr1_4:52277527-52277546 None:intergenic 35.0%
ATACCCTCCATTTCTCTTAT+AGG - chr1_4:52277528-52277547 None:intergenic 35.0%
TCTTCATCTTTAAGCATTCG+AGG - chr1_4:52277689-52277708 None:intergenic 35.0%
AATGAAGAGAGTGATTCTGA+TGG + chr1_4:52277713-52277732 Msa0169140:CDS 35.0%
TGTACTTCAGAATTATGCTC+AGG - chr1_4:52277761-52277780 None:intergenic 35.0%
TGATAAACACAGGCATATCT+TGG + chr1_4:52277799-52277818 Msa0169140:CDS 35.0%
CATATCTTGGAAGATGTTGA+TGG + chr1_4:52277812-52277831 Msa0169140:CDS 35.0%
TTCATTTCAACATCACGAGA+GGG - chr1_4:52277863-52277882 None:intergenic 35.0%
ATTCATTTCAACATCACGAG+AGG - chr1_4:52277864-52277883 None:intergenic 35.0%
CACCAAGAGTTAACAACTAA+TGG + chr1_4:52278160-52278179 Msa0169140:intron 35.0%
ACCCATTAGTTGTTAACTCT+TGG - chr1_4:52278165-52278184 None:intergenic 35.0%
TGTCGATAATTTACTGGATG+CGG - chr1_4:52278367-52278386 None:intergenic 35.0%
! GTGTTACTATGCATGATAGA+GGG + chr1_4:52278395-52278414 Msa0169140:CDS 35.0%
AAATGTTGCCTATTGGAGTA+AGG - chr1_4:52278520-52278539 None:intergenic 35.0%
CATCTCTCTCGATAATCATA+TGG - chr1_4:52278604-52278623 None:intergenic 35.0%
CATATGATTATCGAGAGAGA+TGG + chr1_4:52278602-52278621 Msa0169140:CDS 35.0%
!!! TTTTTTATTGGGTAGGTCCT+AGG + chr1_4:52278725-52278744 Msa0169140:intron 35.0%
ATATCTTCGTCATGATACCT+AGG - chr1_4:52278745-52278764 None:intergenic 35.0%
ACTGGAATTGCATCTTCAAA+GGG - chr1_4:52278877-52278896 None:intergenic 35.0%
AACTGGAATTGCATCTTCAA+AGG - chr1_4:52278878-52278897 None:intergenic 35.0%
AATGAACCTCTGTTTGTAAC+TGG - chr1_4:52278895-52278914 None:intergenic 35.0%
GAGGAAAAATAATGGTAAGG+GGG - chr1_4:52278918-52278937 None:intergenic 35.0%
GGAAATTATGTTTGCATGTC+AGG + chr1_4:52278998-52279017 Msa0169140:intron 35.0%
GTATGCTTCTGATTAACTGT+CGG + chr1_4:52279069-52279088 Msa0169140:intron 35.0%
TATGCTTCTGATTAACTGTC+GGG + chr1_4:52279070-52279089 Msa0169140:intron 35.0%
CCACAAACACTAATAGTTGA+AGG - chr1_4:52279100-52279119 None:intergenic 35.0%
CCTTCAACTATTAGTGTTTG+TGG + chr1_4:52279097-52279116 Msa0169140:intron 35.0%
!! CTTTGTTTAGGAGGTGTTTA+TGG + chr1_4:52279179-52279198 Msa0169140:three_prime_UTR 35.0%
TTATGTTGAATCCTCCTCAA+AGG - chr1_4:52279230-52279249 None:intergenic 35.0%
TCCCTTCAATTAACAATTCC+AGG - chr1_4:52279485-52279504 None:intergenic 35.0%
ATGGGAGAATACAGTTGAAT+TGG - chr1_4:52279520-52279539 None:intergenic 35.0%
GGCTCAAACATCTAAAGAAT+TGG - chr1_4:52279607-52279626 None:intergenic 35.0%
ACAGTGGTTTGATATGCTTT+CGG + chr1_4:52279649-52279668 Msa0169140:three_prime_UTR 35.0%
TGGGATAAATGTCTTACTCA+CGG + chr1_4:52279750-52279769 Msa0169140:three_prime_UTR 35.0%
TTACTTCATCTGACCCATAG+CGG + chr1_4:52264388-52264407 Msa0169140:five_prime_UTR 40.0%
!! GTTTTTGGATTGCATGTTGG+TGG + chr1_4:52264623-52264642 Msa0169140:intron 40.0%
GGTTACTGTAAACTCAACTG+GGG + chr1_4:52264886-52264905 Msa0169140:intron 40.0%
!! AACTCAACTGGGGTTTTATC+TGG + chr1_4:52264896-52264915 Msa0169140:intron 40.0%
!! ACTCAACTGGGGTTTTATCT+GGG + chr1_4:52264897-52264916 Msa0169140:intron 40.0%
TGGATTGAAACGGTGACAAT+TGG + chr1_4:52264958-52264977 Msa0169140:intron 40.0%
TTCACAATCACTGTCTACCT+GGG + chr1_4:52265004-52265023 Msa0169140:intron 40.0%
!! TACTGATTCGTGCGAAAGTA+AGG - chr1_4:52265248-52265267 None:intergenic 40.0%
!! CGGATTGAAAGTTGAGTTGA+AGG - chr1_4:52265427-52265446 None:intergenic 40.0%
!! AACACACATTGATGGTGTTC+CGG - chr1_4:52265447-52265466 None:intergenic 40.0%
ATGTGTGTTTGCATTCATGG+TGG + chr1_4:52265458-52265477 Msa0169140:intron 40.0%
!!! GATGCAAGAGAATTGGCTTT+TGG + chr1_4:52265696-52265715 Msa0169140:intron 40.0%
!!! CTTTTCGAGTTTGTTGCTTG+TGG + chr1_4:52265781-52265800 Msa0169140:intron 40.0%
! ATAGCTATGAACGTGCTGTT+AGG + chr1_4:52266027-52266046 Msa0169140:intron 40.0%
GGGGACAATGCTTAATTACA+TGG + chr1_4:52266255-52266274 Msa0169140:intron 40.0%
GGATTGAGAATGAATGAGAC+AGG - chr1_4:52266618-52266637 None:intergenic 40.0%
!! ATTGTTAATAGGGGTGCCTT+AGG + chr1_4:52266676-52266695 Msa0169140:intron 40.0%
! GGTGCCTTAGGTTATTGATT+GGG + chr1_4:52266688-52266707 Msa0169140:intron 40.0%
TCTCCAGTAGACAGTAGTAA+TGG - chr1_4:52266827-52266846 None:intergenic 40.0%
AAATAGTCTAGCCTGCATTC+AGG + chr1_4:52267100-52267119 Msa0169140:CDS 40.0%
ACTCTACTGTACTTCAGATG+CGG + chr1_4:52267559-52267578 Msa0169140:intron 40.0%
CATTTGGCAAAGTCATAACC+TGG + chr1_4:52267638-52267657 Msa0169140:intron 40.0%
AATTCAAATCTGACGGAACC+AGG - chr1_4:52267659-52267678 None:intergenic 40.0%
!! AGCTTATGATGGACCATTTC+AGG - chr1_4:52267913-52267932 None:intergenic 40.0%
ATCATAAGCTTGCCCATGAA+GGG + chr1_4:52267923-52267942 Msa0169140:intron 40.0%
GCTTGTATCTTTGCTGATGT+CGG + chr1_4:52268009-52268028 Msa0169140:intron 40.0%
CTTGCAAACAAAAGAGACAC+TGG + chr1_4:52268033-52268052 Msa0169140:intron 40.0%
AACAAAAGAGACACTGGAGT+AGG + chr1_4:52268039-52268058 Msa0169140:intron 40.0%
ACAAAAGAGACACTGGAGTA+GGG + chr1_4:52268040-52268059 Msa0169140:intron 40.0%
CATTTCCATCATGGTAACCT+TGG - chr1_4:52268230-52268249 None:intergenic 40.0%
TGTTGGCATCATTTCCATCA+TGG - chr1_4:52268239-52268258 None:intergenic 40.0%
ATACACCCAACTTTCTTTGG+CGG + chr1_4:52268325-52268344 Msa0169140:intron 40.0%
GGGCTTAGGGAAATAAAGAA+CGG - chr1_4:52268371-52268390 None:intergenic 40.0%
ACCTAAGTGAAGCTGCATAT+AGG + chr1_4:52268588-52268607 Msa0169140:intron 40.0%
! TAGTTTGTCAAGCTAACCCT+TGG + chr1_4:52268691-52268710 Msa0169140:intron 40.0%
AGTTTGTCAAGCTAACCCTT+GGG + chr1_4:52268692-52268711 Msa0169140:intron 40.0%
CACAAATACACTAACCCCAA+GGG - chr1_4:52268710-52268729 None:intergenic 40.0%
TTAGTGGCATTTAGGAAAGG+CGG - chr1_4:52268773-52268792 None:intergenic 40.0%
GTGTTAGTGGCATTTAGGAA+AGG - chr1_4:52268776-52268795 None:intergenic 40.0%
!! GAAGAGTACTAAAGCTAGGT+TGG - chr1_4:52268849-52268868 None:intergenic 40.0%
! TGATGGGTACCTAGTAGATT+AGG + chr1_4:52268881-52268900 Msa0169140:intron 40.0%
CTGCACTTTGTTAAGAAGGA+TGG - chr1_4:52268907-52268926 None:intergenic 40.0%
ATCTTAGTCGCAAGTAGGAA+AGG - chr1_4:52268992-52269011 None:intergenic 40.0%
! TGCATTTTTGATGAGTGAGC+TGG + chr1_4:52269262-52269281 Msa0169140:intron 40.0%
GGTTTCAATAGCTGCATTTG+AGG + chr1_4:52269290-52269309 Msa0169140:intron 40.0%
CATCTGGTTATGCATACTTG+AGG + chr1_4:52269365-52269384 Msa0169140:intron 40.0%
!!! TGAGGTTTTGAACTGATTGG+GGG + chr1_4:52269383-52269402 Msa0169140:intron 40.0%
! ATCGTTTTACCCTATCAGGT+TGG - chr1_4:52269575-52269594 None:intergenic 40.0%
GGTAAAACGATAGTATCAGG+AGG + chr1_4:52269584-52269603 Msa0169140:intron 40.0%
TGGAGATCTGGTTGAAAAAG+TGG + chr1_4:52269633-52269652 Msa0169140:intron 40.0%
GCAACACAAAGTCTTCCATA+AGG - chr1_4:52269682-52269701 None:intergenic 40.0%
CTGCACACACAAAAGATGTA+AGG - chr1_4:52269835-52269854 None:intergenic 40.0%
GCCATTCAACTCATACAACA+AGG + chr1_4:52270050-52270069 Msa0169140:CDS 40.0%
CAACCCATGGCTATCAATAT+CGG - chr1_4:52270130-52270149 None:intergenic 40.0%
! TCATGATAACGAGGCATCAA+AGG + chr1_4:52270197-52270216 Msa0169140:CDS 40.0%
TATCTGTTATGAAGCCCTGT+GGG - chr1_4:52270305-52270324 None:intergenic 40.0%
GAGCTTCTATTCTTTCGTAC+TGG - chr1_4:52270336-52270355 None:intergenic 40.0%
AATGACAGTGGAAAGAATGC+TGG + chr1_4:52270387-52270406 Msa0169140:CDS 40.0%
TCATTACAACCAGCAAGATC+AGG - chr1_4:52270477-52270496 None:intergenic 40.0%
!! TCATCTGCTTTGGTCTTGAA+TGG + chr1_4:52270504-52270523 Msa0169140:CDS 40.0%
!! TTTGGTCTTGAATGGTAGCA+TGG + chr1_4:52270512-52270531 Msa0169140:CDS 40.0%
TTTGAATGAGGGTAGTGCAA+TGG + chr1_4:52270587-52270606 Msa0169140:CDS 40.0%
! TTCAGGGCATTCACTAGTTT+CGG - chr1_4:52270631-52270650 None:intergenic 40.0%
TGTTCAGCTCAACTTCTTCA+GGG - chr1_4:52270647-52270666 None:intergenic 40.0%
TTGTTCAGCTCAACTTCTTC+AGG - chr1_4:52270648-52270667 None:intergenic 40.0%
GAAGAAGTTGAGCTGAACAA+AGG + chr1_4:52270648-52270667 Msa0169140:CDS 40.0%
!! AATGTTCTGGGAACTTTGAC+TGG - chr1_4:52270796-52270815 None:intergenic 40.0%
CGGAATTTCTGCAAATGTTC+TGG - chr1_4:52270809-52270828 None:intergenic 40.0%
! TTGCTCAAAGCATCTCTCTT+CGG - chr1_4:52270829-52270848 None:intergenic 40.0%
AAACGATGGAGAGTCAGAAT+GGG + chr1_4:52270876-52270895 Msa0169140:CDS 40.0%
GGTAAATCATCTTCCACAGA+GGG + chr1_4:52270897-52270916 Msa0169140:CDS 40.0%
! CATTATTCATGGTGCCAATC+AGG - chr1_4:52271046-52271065 None:intergenic 40.0%
AGATCAAACATTCTGCTCTG+TGG + chr1_4:52271124-52271143 Msa0169140:CDS 40.0%
GGCAATTGATGTCATTCTTG+AGG - chr1_4:52271252-52271271 None:intergenic 40.0%
TATCAAGACAAGTCCAGATG+TGG + chr1_4:52271289-52271308 Msa0169140:CDS 40.0%
ACATTCTTGCCAGTTTCTTG+TGG - chr1_4:52271485-52271504 None:intergenic 40.0%
CAATTTGATCTGCAGCACAT+TGG - chr1_4:52271511-52271530 None:intergenic 40.0%
GATTTGAAAACTCAGGTGCA+TGG + chr1_4:52271572-52271591 Msa0169140:CDS 40.0%
TTTGAAAACTCAGGTGCATG+GGG + chr1_4:52271574-52271593 Msa0169140:CDS 40.0%
TCCAATACATCAGAGCACAA+TGG + chr1_4:52271719-52271738 Msa0169140:CDS 40.0%
TCCATTGTGCTCTGATGTAT+TGG - chr1_4:52271723-52271742 None:intergenic 40.0%
TTGAGGCGGATCAATATTAG+GGG - chr1_4:52271792-52271811 None:intergenic 40.0%
TATTGATCCGCCTCAAAATG+AGG + chr1_4:52271796-52271815 Msa0169140:CDS 40.0%
! GAAACACCAACCTCATTTTG+AGG - chr1_4:52271809-52271828 None:intergenic 40.0%
!! AAATGAGGTTGGTGTTTCTG+AGG + chr1_4:52271811-52271830 Msa0169140:CDS 40.0%
!! AATGAGGTTGGTGTTTCTGA+GGG + chr1_4:52271812-52271831 Msa0169140:CDS 40.0%
ACTTTACTAGGATTCCACCA+TGG - chr1_4:52272083-52272102 None:intergenic 40.0%
ACAGAATTCAAATCCTCCTC+TGG - chr1_4:52272259-52272278 None:intergenic 40.0%
TGTTTCAACATCTGACTGTC+TGG + chr1_4:52272276-52272295 Msa0169140:CDS 40.0%
GTTTCAACATCTGACTGTCT+GGG + chr1_4:52272277-52272296 Msa0169140:CDS 40.0%
TTGCAAATTGACGTGTTTGG+AGG - chr1_4:52272376-52272395 None:intergenic 40.0%
GACTACAACTTCCATTGTGA+AGG - chr1_4:52272426-52272445 None:intergenic 40.0%
TTCTGGTGCAAATGTACATC+AGG - chr1_4:52272448-52272467 None:intergenic 40.0%
CCATACTTACTTTCATCGAC+AGG - chr1_4:52272487-52272506 None:intergenic 40.0%
CCTGTCGATGAAAGTAAGTA+TGG + chr1_4:52272484-52272503 Msa0169140:CDS 40.0%
AATGGGTAAGTCAACTGAAG+CGG + chr1_4:52272534-52272553 Msa0169140:CDS 40.0%
CAATGCTTGGGACATTGAAA+AGG + chr1_4:52272584-52272603 Msa0169140:CDS 40.0%
TGGGACATTGAAAAGGACAA+AGG + chr1_4:52272591-52272610 Msa0169140:CDS 40.0%
! GCTATTGACTGTGCAAAGTT+TGG + chr1_4:52272640-52272659 Msa0169140:CDS 40.0%
CTCAGATTTCATGGGATCAA+TGG - chr1_4:52272818-52272837 None:intergenic 40.0%
CATGGAAGACTCAGATTTCA+TGG - chr1_4:52272827-52272846 None:intergenic 40.0%
AGGACTGAGATAGGAAATAC+AGG - chr1_4:52272922-52272941 None:intergenic 40.0%
! TGCTGTGTTTCCATTTTGAG+AGG + chr1_4:52272949-52272968 Msa0169140:intron 40.0%
!! TTCCATTTTGAGAGGAAGAC+AGG + chr1_4:52272957-52272976 Msa0169140:intron 40.0%
!! TCCATTTTGAGAGGAAGACA+GGG + chr1_4:52272958-52272977 Msa0169140:intron 40.0%
!! GGGTATTGGTACAAAAAGCA+TGG + chr1_4:52272978-52272997 Msa0169140:intron 40.0%
ATGATTGGGGGGGTAAAAAA+TGG - chr1_4:52273288-52273307 None:intergenic 40.0%
ATAGCAGCGCTATAGAATAG+CGG + chr1_4:52273455-52273474 Msa0169140:intron 40.0%
GTGGCTATATATAGAGTGAG+TGG + chr1_4:52273538-52273557 Msa0169140:intron 40.0%
GCTATATATAGAGTGAGTGG+TGG + chr1_4:52273541-52273560 Msa0169140:intron 40.0%
! TAGATAGCGCTCTAGTTTAG+AGG + chr1_4:52273750-52273769 Msa0169140:intron 40.0%
TGAGATAGCAGTTGCTATAG+CGG + chr1_4:52273856-52273875 Msa0169140:intron 40.0%
!! CGCTATATCACTTTTGTGGT+CGG + chr1_4:52274273-52274292 Msa0169140:intron 40.0%
TTGCAGATCAATGTGGATCT+CGG - chr1_4:52274316-52274335 None:intergenic 40.0%
! AACCACTACTGACTACAGTA+CGG - chr1_4:52274618-52274637 None:intergenic 40.0%
ACACTATGCAACACCAATAG+TGG - chr1_4:52274647-52274666 None:intergenic 40.0%
!! CTATTGGTGTTGCATAGTGT+TGG + chr1_4:52274647-52274666 Msa0169140:intron 40.0%
!! ATTGGTGTTGCATAGTGTTG+GGG + chr1_4:52274649-52274668 Msa0169140:intron 40.0%
CAGCCACTATGTCAAAGTTT+AGG - chr1_4:52274856-52274875 None:intergenic 40.0%
ATTGCATTATGCACCTGGTA+TGG + chr1_4:52275017-52275036 Msa0169140:intron 40.0%
!! ATGATATTTCTGGCCATACC+AGG - chr1_4:52275033-52275052 None:intergenic 40.0%
AACTCCCTTAGACCATGAAA+TGG + chr1_4:52275119-52275138 Msa0169140:intron 40.0%
! TAGTACAATAATGGGACCCT+TGG + chr1_4:52275218-52275237 Msa0169140:intron 40.0%
CTCTACAGTACAAGTGAAAC+CGG - chr1_4:52275469-52275488 None:intergenic 40.0%
! CTTTGGTCTTCACGTCAATA+AGG - chr1_4:52275527-52275546 None:intergenic 40.0%
AATCTCTTGAACTCTTGGCA+GGG - chr1_4:52276025-52276044 None:intergenic 40.0%
AGACCAATCTCTTGAACTCT+TGG - chr1_4:52276030-52276049 None:intergenic 40.0%
TTGAATGGTTATGGGAGAGA+GGG - chr1_4:52276059-52276078 None:intergenic 40.0%
ATTGAATGGTTATGGGAGAG+AGG - chr1_4:52276060-52276079 None:intergenic 40.0%
! GGTCTCTCTCTCTCTAAAAA+AGG + chr1_4:52276259-52276278 Msa0169140:intron 40.0%
! TCTCTCTCTCTAAAAAAGGG+AGG + chr1_4:52276263-52276282 Msa0169140:intron 40.0%
! CTCTAAAAAAGGGAGGAGAT+TGG + chr1_4:52276270-52276289 Msa0169140:intron 40.0%
TAGAACTCAAGCTTTCGGTT+AGG - chr1_4:52276683-52276702 None:intergenic 40.0%
GTGGTTAGAACTCAAGCTTT+CGG - chr1_4:52276688-52276707 None:intergenic 40.0%
! AGCTTGAGTTCTAACCACAT+TGG + chr1_4:52276690-52276709 Msa0169140:intron 40.0%
TTGGATGTTTGGCGTATTAC+AGG + chr1_4:52276916-52276935 Msa0169140:intron 40.0%
! TCTATTGCACAGTTTTCTCG+AGG + chr1_4:52277016-52277035 Msa0169140:CDS 40.0%
TTGCCTTAAGACATTGCCTA+CGG - chr1_4:52277257-52277276 None:intergenic 40.0%
!!! ATAGGTTTTAAGGCTGTGGT+TGG + chr1_4:52277380-52277399 Msa0169140:intron 40.0%
AATCCAATTCCCGGATATGA+TGG - chr1_4:52277437-52277456 None:intergenic 40.0%
GACGATCATTAAGAACAGAG+AGG + chr1_4:52277490-52277509 Msa0169140:CDS 40.0%
ATTAAGAACAGAGAGGGCTT+TGG + chr1_4:52277497-52277516 Msa0169140:CDS 40.0%
GGATGACCCTATAAGAGAAA+TGG + chr1_4:52277518-52277537 Msa0169140:CDS 40.0%
TGACCCTATAAGAGAAATGG+AGG + chr1_4:52277521-52277540 Msa0169140:CDS 40.0%
GACCCTATAAGAGAAATGGA+GGG + chr1_4:52277522-52277541 Msa0169140:CDS 40.0%
GGTATGCATGTTGACGAATA+TGG + chr1_4:52277543-52277562 Msa0169140:CDS 40.0%
TGCATGTTGACGAATATGGA+AGG + chr1_4:52277547-52277566 Msa0169140:CDS 40.0%
AACTCAAGTTTGCAGTTACC+TGG + chr1_4:52277653-52277672 Msa0169140:CDS 40.0%
! TTCTGATGGAGGCAATTTTG+AGG + chr1_4:52277727-52277746 Msa0169140:CDS 40.0%
!! TGTTGATGGTGAGCTTGAAA+TGG + chr1_4:52277826-52277845 Msa0169140:CDS 40.0%
GGCATTTCCTCTATCAACAT+TGG - chr1_4:52277894-52277913 None:intergenic 40.0%
GATGAAACAAGATGTGGCAT+AGG - chr1_4:52278037-52278056 None:intergenic 40.0%
GAGGTAGATGAAACAAGATG+TGG - chr1_4:52278043-52278062 None:intergenic 40.0%
TAGAGGTCATACAGAATCAC+AGG + chr1_4:52278090-52278109 Msa0169140:CDS 40.0%
! TAATGGGTGTCCTTTCTACT+TGG + chr1_4:52278177-52278196 Msa0169140:intron 40.0%
TGCAAAAGGACCAAGTAGAA+AGG - chr1_4:52278190-52278209 None:intergenic 40.0%
GCACTGCATTACTAATAGGT+TGG - chr1_4:52278273-52278292 None:intergenic 40.0%
TGGTGCACTGCATTACTAAT+AGG - chr1_4:52278277-52278296 None:intergenic 40.0%
TGTGTGCTTCCCTATATTCT+GGG - chr1_4:52278306-52278325 None:intergenic 40.0%
ATGTGTGCTTCCCTATATTC+TGG - chr1_4:52278307-52278326 None:intergenic 40.0%
AATTTACTGGATGCGGTACA+GGG - chr1_4:52278360-52278379 None:intergenic 40.0%
TAATTTACTGGATGCGGTAC+AGG - chr1_4:52278361-52278380 None:intergenic 40.0%
!! GGTGTTACTATGCATGATAG+AGG + chr1_4:52278394-52278413 Msa0169140:CDS 40.0%
!! ATGATAGAGGGCACTCTATA+AGG + chr1_4:52278407-52278426 Msa0169140:CDS 40.0%
TCTCGATAATCATATGGAGG+CGG - chr1_4:52278598-52278617 None:intergenic 40.0%
CTCTCTCGATAATCATATGG+AGG - chr1_4:52278601-52278620 None:intergenic 40.0%
ATTCCAATCTTACCGGGATA+AGG - chr1_4:52278640-52278659 None:intergenic 40.0%
AAGATATGCCTTCCCCATAT+GGG + chr1_4:52278758-52278777 Msa0169140:CDS 40.0%
TGTTCCTGTGATTCATTGAC+CGG - chr1_4:52278837-52278856 None:intergenic 40.0%
TCTTCAAAGGGTGGTCTAAA+TGG - chr1_4:52278865-52278884 None:intergenic 40.0%
GCAATTCCAGTTACAAACAG+AGG + chr1_4:52278886-52278905 Msa0169140:CDS 40.0%
ATCCTTGGTTACTATCACCT+GGG - chr1_4:52279040-52279059 None:intergenic 40.0%
! AATCAGAAGCATACCAGACT+TGG - chr1_4:52279063-52279082 None:intergenic 40.0%
GTATACCTAGCAATCAAGGA+GGG - chr1_4:52279134-52279153 None:intergenic 40.0%
TGTATACCTAGCAATCAAGG+AGG - chr1_4:52279135-52279154 None:intergenic 40.0%
! CTAGGTATACAGCCTCTTTT+CGG + chr1_4:52279144-52279163 Msa0169140:intron 40.0%
GGATTCAACATAATCTGCAC+AGG + chr1_4:52279237-52279256 Msa0169140:three_prime_UTR 40.0%
TACCCAGGCAAACAATGTAT+GGG - chr1_4:52279538-52279557 None:intergenic 40.0%
ATACCCAGGCAAACAATGTA+TGG - chr1_4:52279539-52279558 None:intergenic 40.0%
ACATTGTTTGCCTGGGTATT+TGG + chr1_4:52279540-52279559 Msa0169140:three_prime_UTR 40.0%
GTATTTGGTATGCCAACTCA+AGG + chr1_4:52279555-52279574 Msa0169140:three_prime_UTR 40.0%
AAGAATTGGCAACCACTAAC+AGG - chr1_4:52279593-52279612 None:intergenic 40.0%
CTTCTTGCATAAAACCGTGT+GGG + chr1_4:52279626-52279645 Msa0169140:three_prime_UTR 40.0%
GGTGTGTTCAACTGAAACAT+TGG + chr1_4:52279696-52279715 Msa0169140:three_prime_UTR 40.0%
ATAAATGTCTTACTCACGGC+CGG + chr1_4:52279754-52279773 Msa0169140:three_prime_UTR 40.0%
AAAGAATCAAACGGCTGCAA+AGG - chr1_4:52279807-52279826 None:intergenic 40.0%
TGAGAAGAAGACAGTGTGTG+CGG - chr1_4:52264271-52264290 None:intergenic 45.0%
! CTTTACTGCCTCCTTTTCTC+CGG - chr1_4:52264440-52264459 None:intergenic 45.0%
AAAAGGAGGCAGTAAAGCAG+CGG + chr1_4:52264443-52264462 Msa0169140:CDS 45.0%
AAGTTAAAGGCTTCCCTGCA+TGG + chr1_4:52264517-52264536 Msa0169140:CDS 45.0%
!! CTCAACTGGGGTTTTATCTG+GGG + chr1_4:52264898-52264917 Msa0169140:intron 45.0%
GTTCACAATCACTGTCTACC+TGG + chr1_4:52265003-52265022 Msa0169140:intron 45.0%
TCACAATCACTGTCTACCTG+GGG + chr1_4:52265005-52265024 Msa0169140:intron 45.0%
TTCGCACGAATCAGTAGTGA+AGG + chr1_4:52265252-52265271 Msa0169140:intron 45.0%
TCGCACGAATCAGTAGTGAA+GGG + chr1_4:52265253-52265272 Msa0169140:intron 45.0%
! TGTTTGCATTCATGGTGGAG+AGG + chr1_4:52265463-52265482 Msa0169140:intron 45.0%
!! AAACTAGGCTTGAGTTGGCT+TGG - chr1_4:52265970-52265989 None:intergenic 45.0%
CGCTTAAACTAGGCTTGAGT+TGG - chr1_4:52265975-52265994 None:intergenic 45.0%
GGGTGCCTTAGGTTATTGAT+TGG + chr1_4:52266687-52266706 Msa0169140:intron 45.0%
TGGCCATTACTACTGTCTAC+TGG + chr1_4:52266821-52266840 Msa0169140:intron 45.0%
TCACACAGTCTAACATTCGC+TGG + chr1_4:52267032-52267051 Msa0169140:CDS 45.0%
! TCTCCATGTTTTCCGCCAAA+AGG + chr1_4:52267176-52267195 Msa0169140:intron 45.0%
! CTCCATGTTTTCCGCCAAAA+GGG + chr1_4:52267177-52267196 Msa0169140:intron 45.0%
GGTTTCTCACTCTTTCTCTC+AGG - chr1_4:52267272-52267291 None:intergenic 45.0%
AACTAGCAACGGTAACCACA+TGG + chr1_4:52267438-52267457 Msa0169140:intron 45.0%
AGGACTCGAACCAAGAAAAG+TGG + chr1_4:52267840-52267859 Msa0169140:intron 45.0%
CTTCATGGGCAAGCTTATGA+TGG - chr1_4:52267924-52267943 None:intergenic 45.0%
CATCATAAGCTTGCCCATGA+AGG + chr1_4:52267922-52267941 Msa0169140:intron 45.0%
CAGATGCCGTTGGAAAACAT+TGG - chr1_4:52268110-52268129 None:intergenic 45.0%
AACATTGCAACAGATGCCGT+TGG - chr1_4:52268120-52268139 None:intergenic 45.0%
TTCCATCATGGTAACCTTGG+AGG - chr1_4:52268227-52268246 None:intergenic 45.0%
GCAGCTTCACTTAGGTTTGT+AGG - chr1_4:52268584-52268603 None:intergenic 45.0%
GCCTATATGCAGCTTCACTT+AGG - chr1_4:52268592-52268611 None:intergenic 45.0%
CTTCCTGCTTTGACAAACAC+TGG + chr1_4:52268664-52268683 Msa0169140:intron 45.0%
CAACCAGTGTTTGTCAAAGC+AGG - chr1_4:52268670-52268689 None:intergenic 45.0%
GTTTGTCAAGCTAACCCTTG+GGG + chr1_4:52268693-52268712 Msa0169140:intron 45.0%
GCACAAATACACTAACCCCA+AGG - chr1_4:52268711-52268730 None:intergenic 45.0%
GTGTGGAGTTACAGTGTTAG+TGG - chr1_4:52268789-52268808 None:intergenic 45.0%
GAAGGATGGCCTAATCTACT+AGG - chr1_4:52268893-52268912 None:intergenic 45.0%
! CCTTCCTTAAGCCTTGTGAT+GGG + chr1_4:52268961-52268980 Msa0169140:intron 45.0%
! CTTCCTTAAGCCTTGTGATG+GGG + chr1_4:52268962-52268981 Msa0169140:intron 45.0%
TCCTACTTGCGACTAAGATG+AGG + chr1_4:52268993-52269012 Msa0169140:intron 45.0%
TTTGATGAGTGAGCTGGAGT+AGG + chr1_4:52269268-52269287 Msa0169140:intron 45.0%
TTGATGAGTGAGCTGGAGTA+GGG + chr1_4:52269269-52269288 Msa0169140:intron 45.0%
GCACAGTCTTGAACAACATC+TGG + chr1_4:52269349-52269368 Msa0169140:intron 45.0%
GTGTTGCAATGTAGACTGCT+AGG + chr1_4:52269695-52269714 Msa0169140:intron 45.0%
GTAAATGCTTCGACATCAGC+AGG - chr1_4:52269871-52269890 None:intergenic 45.0%
! TGATGTCGAAGCATTTACCG+AGG + chr1_4:52269873-52269892 Msa0169140:CDS 45.0%
CAATCTCTCGTCAAACGTCA+AGG + chr1_4:52269904-52269923 Msa0169140:CDS 45.0%
TCTCGTCAAACGTCAAGGAA+AGG + chr1_4:52269909-52269928 Msa0169140:CDS 45.0%
CTCGTCAAACGTCAAGGAAA+GGG + chr1_4:52269910-52269929 Msa0169140:CDS 45.0%
CTTCACAGCACGAACAAAGT+CGG - chr1_4:52269938-52269957 None:intergenic 45.0%
! CAACTTGGTGAAGCTAACTG+TGG + chr1_4:52269997-52270016 Msa0169140:CDS 45.0%
GGTAAAGTAGGCGATAAAGC+AGG - chr1_4:52270090-52270109 None:intergenic 45.0%
! CGATATTGATAGCCATGGGT+TGG + chr1_4:52270128-52270147 Msa0169140:CDS 45.0%
ATCTGTTATGAAGCCCTGTG+GGG - chr1_4:52270304-52270323 None:intergenic 45.0%
CTATCTGTTATGAAGCCCTG+TGG - chr1_4:52270306-52270325 None:intergenic 45.0%
CACAGGGCTTCATAACAGAT+AGG + chr1_4:52270304-52270323 Msa0169140:CDS 45.0%
CAATTAACCAATGCAGCCCA+GGG + chr1_4:52270414-52270433 Msa0169140:CDS 45.0%
AGGAAATCACCTGATCTTGC+TGG + chr1_4:52270465-52270484 Msa0169140:CDS 45.0%
TGGTTGCCCTCTTCCTATTT+GGG - chr1_4:52270719-52270738 None:intergenic 45.0%
TTGGTTGCCCTCTTCCTATT+TGG - chr1_4:52270720-52270739 None:intergenic 45.0%
!! GGTTGGCTTGGAAGTATCAT+TGG - chr1_4:52270739-52270758 None:intergenic 45.0%
! CTCAACTCTAATGGTTGGCT+TGG - chr1_4:52270751-52270770 None:intergenic 45.0%
CAAGCCAACCATTAGAGTTG+AGG + chr1_4:52270749-52270768 Msa0169140:CDS 45.0%
TCCTCCTCAACTCTAATGGT+TGG - chr1_4:52270756-52270775 None:intergenic 45.0%
AGGTTCCTCCTCAACTCTAA+TGG - chr1_4:52270760-52270779 None:intergenic 45.0%
ATTAGAGTTGAGGAGGAACC+TGG + chr1_4:52270759-52270778 Msa0169140:CDS 45.0%
! GAGAGATGCTTTGAGCAAGA+TGG + chr1_4:52270831-52270850 Msa0169140:CDS 45.0%
ACTCTCCATCGTTTCACAAG+GGG - chr1_4:52270870-52270889 None:intergenic 45.0%
GACTCTCCATCGTTTCACAA+GGG - chr1_4:52270871-52270890 None:intergenic 45.0%
TGACTCTCCATCGTTTCACA+AGG - chr1_4:52270872-52270891 None:intergenic 45.0%
GAAACGATGGAGAGTCAGAA+TGG + chr1_4:52270875-52270894 Msa0169140:CDS 45.0%
GGGTAAATCATCTTCCACAG+AGG + chr1_4:52270896-52270915 Msa0169140:CDS 45.0%
TACTCCAGGGAAAAGCTGTA+AGG + chr1_4:52270941-52270960 Msa0169140:CDS 45.0%
! TCTTCCTTACAGCTTTTCCC+TGG - chr1_4:52270948-52270967 None:intergenic 45.0%
TTGGAGGAAGCTATCATCTG+CGG - chr1_4:52270984-52271003 None:intergenic 45.0%
GCTTCCTCCAATTGTGAGAA+TGG + chr1_4:52270993-52271012 Msa0169140:CDS 45.0%
TCCTCCAATTGTGAGAATGG+AGG + chr1_4:52270996-52271015 Msa0169140:CDS 45.0%
AGAGCCTCCATTCTCACAAT+TGG - chr1_4:52271003-52271022 None:intergenic 45.0%
TTCAGCAGCATTAGCTGACA+TGG - chr1_4:52271201-52271220 None:intergenic 45.0%
TCAGCTAATGCTGCTGAAGA+AGG + chr1_4:52271203-52271222 Msa0169140:CDS 45.0%
TTGCAAAAGTTCGATGCCTG+TGG + chr1_4:52271344-52271363 Msa0169140:CDS 45.0%
! GGTTAGTCACACTGCTAATG+TGG + chr1_4:52271550-52271569 Msa0169140:CDS 45.0%
TCACATCTGCCACAGAATGA+AGG - chr1_4:52271751-52271770 None:intergenic 45.0%
!! ACACCAACCTCATTTTGAGG+CGG - chr1_4:52271806-52271825 None:intergenic 45.0%
CTGTAGACATCATCTACTGC+TGG - chr1_4:52271854-52271873 None:intergenic 45.0%
GGTAAAATGTGAAGGACCAG+AGG + chr1_4:52272240-52272259 Msa0169140:CDS 45.0%
AAAATGTGAAGGACCAGAGG+AGG + chr1_4:52272243-52272262 Msa0169140:CDS 45.0%
ATCTGACTGTCTGGGTCAAA+AGG + chr1_4:52272285-52272304 Msa0169140:CDS 45.0%
TCTGGGTCAAAAGGCTGTTT+CGG + chr1_4:52272294-52272313 Msa0169140:CDS 45.0%
! AAAAGGCTGTTTCGGGCATT+CGG + chr1_4:52272302-52272321 Msa0169140:CDS 45.0%
ATGGGTAAGTCAACTGAAGC+GGG + chr1_4:52272535-52272554 Msa0169140:CDS 45.0%
! CAATAGCTATGCGTGTTGCT+CGG - chr1_4:52272627-52272646 None:intergenic 45.0%
!! CAACGGAGCATTTTCAGAGT+AGG - chr1_4:52272716-52272735 None:intergenic 45.0%
CAGAACTAGAGGACTGAGAT+AGG - chr1_4:52272931-52272950 None:intergenic 45.0%
TGGAAACACAGCAGAACTAG+AGG - chr1_4:52272942-52272961 None:intergenic 45.0%
ACCCTGTCTTCCTCTCAAAA+TGG - chr1_4:52272962-52272981 None:intergenic 45.0%
TTGAGAGGAAGACAGGGTAT+TGG + chr1_4:52272964-52272983 Msa0169140:intron 45.0%
CTCGAGATCATATTTGGAGG+AGG - chr1_4:52273058-52273077 None:intergenic 45.0%
CTCCTCCAAATATGATCTCG+AGG + chr1_4:52273056-52273075 Msa0169140:intron 45.0%
CACCTCGAGATCATATTTGG+AGG - chr1_4:52273061-52273080 None:intergenic 45.0%
AGACCAACAATTTGGAGGGA+AGG + chr1_4:52273206-52273225 Msa0169140:intron 45.0%
AGACCTTCCCTCCAAATTGT+TGG - chr1_4:52273212-52273231 None:intergenic 45.0%
TGAGTGGTGGCTAGTAATCA+AGG + chr1_4:52273554-52273573 Msa0169140:intron 45.0%
GAGTGGTGGCTAGTAATCAA+GGG + chr1_4:52273555-52273574 Msa0169140:intron 45.0%
TCAATGTGGATCTCGGATAG+CGG - chr1_4:52274309-52274328 None:intergenic 45.0%
TGTTGTGCTGTAGTCAGTAG+TGG + chr1_4:52274343-52274362 Msa0169140:intron 45.0%
!!! GGCCCCTATCTGATGTTTTT+TGG + chr1_4:52274400-52274419 Msa0169140:intron 45.0%
TGTAGTCAGTAGTGGTTGTG+CGG + chr1_4:52274621-52274640 Msa0169140:intron 45.0%
!!! TCGCGGTTTTTTGGACGTTT+AGG + chr1_4:52274679-52274698 Msa0169140:intron 45.0%
AGCAGTGAAGAGAAAGCCAA+GGG - chr1_4:52275237-52275256 None:intergenic 45.0%
CAATCTCTTGAACTCTTGGC+AGG - chr1_4:52276026-52276045 None:intergenic 45.0%
CTGCCAAGAGTTCAAGAGAT+TGG + chr1_4:52276024-52276043 Msa0169140:intron 45.0%
AGAGAGAGAGACCAATCTCT+TGG - chr1_4:52276252-52276271 None:intergenic 45.0%
ATCTCACAAGCCAGTTGTGT+GGG - chr1_4:52276331-52276350 None:intergenic 45.0%
CGCACACAGAGGATAAAAGA+TGG - chr1_4:52276388-52276407 None:intergenic 45.0%
CTCCCAAGCATTCGAAATCT+TGG + chr1_4:52276467-52276486 Msa0169140:intron 45.0%
!! TTCTGGAATCTGGGCATCAA+TGG + chr1_4:52276793-52276812 Msa0169140:intron 45.0%
! TCTGGAATCTGGGCATCAAT+GGG + chr1_4:52276794-52276813 Msa0169140:intron 45.0%
GTTTGGCGTATTACAGGTCA+TGG + chr1_4:52276922-52276941 Msa0169140:intron 45.0%
TGAATCAAGTCTGCATCGGA+GGG + chr1_4:52276970-52276989 Msa0169140:CDS 45.0%
CAGCAGATAATAGTCGAGGT+AGG - chr1_4:52277203-52277222 None:intergenic 45.0%
GAACCGTAGGCAATGTCTTA+AGG + chr1_4:52277251-52277270 Msa0169140:CDS 45.0%
AAAAATCCTACCAGAGCCCA+TGG + chr1_4:52277407-52277426 Msa0169140:CDS 45.0%
ATTCGAGGCATGCAAAATCC+AGG - chr1_4:52277674-52277693 None:intergenic 45.0%
GAAGAGAGTGATTCTGATGG+AGG + chr1_4:52277716-52277735 Msa0169140:CDS 45.0%
GAAACAAGATGTGGCATAGG+AGG - chr1_4:52278034-52278053 None:intergenic 45.0%
TACAGTATGGCATGGATCAG+AGG - chr1_4:52278062-52278081 None:intergenic 45.0%
TGTCTTTCACACGCTGCAAA+AGG - chr1_4:52278204-52278223 None:intergenic 45.0%
! CTAATAGGTTGGCTACTCCT+CGG - chr1_4:52278262-52278281 None:intergenic 45.0%
ACCATCATGCCCCAGAATAT+AGG + chr1_4:52278293-52278312 Msa0169140:CDS 45.0%
CCATCATGCCCCAGAATATA+GGG + chr1_4:52278294-52278313 Msa0169140:CDS 45.0%
GTGTGCTTCCCTATATTCTG+GGG - chr1_4:52278305-52278324 None:intergenic 45.0%
!! AAAACTGATTCGACGGCACA+TGG - chr1_4:52278441-52278460 None:intergenic 45.0%
AACAGCATGCAAGACATCGA+AGG + chr1_4:52278476-52278495 Msa0169140:CDS 45.0%
ACAGCATGCAAGACATCGAA+GGG + chr1_4:52278477-52278496 Msa0169140:CDS 45.0%
TGTTGCCTATTGGAGTAAGG+AGG - chr1_4:52278517-52278536 None:intergenic 45.0%
CTCCAATAGGCAACATTTCG+TGG + chr1_4:52278522-52278541 Msa0169140:CDS 45.0%
CTCCACGAAATGTTGCCTAT+TGG - chr1_4:52278527-52278546 None:intergenic 45.0%
GCAACATTTCGTGGAGAACA+TGG + chr1_4:52278531-52278550 Msa0169140:CDS 45.0%
AATCTTACCGGGATAAGGTG+GGG - chr1_4:52278635-52278654 None:intergenic 45.0%
CAATCTTACCGGGATAAGGT+GGG - chr1_4:52278636-52278655 None:intergenic 45.0%
GAAGATATGCCTTCCCCATA+TGG + chr1_4:52278757-52278776 Msa0169140:CDS 45.0%
ACATGGATGACACCCATATG+GGG - chr1_4:52278773-52278792 None:intergenic 45.0%
CACATGGATGACACCCATAT+GGG - chr1_4:52278774-52278793 None:intergenic 45.0%
TCACATGGATGACACCCATA+TGG - chr1_4:52278775-52278794 None:intergenic 45.0%
GGTATTCTAGGTGGTTCACA+TGG - chr1_4:52278790-52278809 None:intergenic 45.0%
CCACCTAGAATACCAGATCA+CGG + chr1_4:52278796-52278815 Msa0169140:CDS 45.0%
CACCTAGAATACCAGATCAC+GGG + chr1_4:52278797-52278816 Msa0169140:CDS 45.0%
TTCCTGTGATTCATTGACCG+GGG - chr1_4:52278835-52278854 None:intergenic 45.0%
GTTCCTGTGATTCATTGACC+GGG - chr1_4:52278836-52278855 None:intergenic 45.0%
AAAGGGTGGTCTAAATGGCA+TGG - chr1_4:52278860-52278879 None:intergenic 45.0%
GGAATTGCATCTTCAAAGGG+TGG - chr1_4:52278874-52278893 None:intergenic 45.0%
CTTCGTAGACCCTTCAACAT+TGG + chr1_4:52278965-52278984 Msa0169140:intron 45.0%
TATGTTTGCATGTCAGGTCC+AGG + chr1_4:52279004-52279023 Msa0169140:intron 45.0%
GATCCTTGGTTACTATCACC+TGG - chr1_4:52279041-52279060 None:intergenic 45.0%
AGTAACCAAGGATCCAAGTC+TGG + chr1_4:52279047-52279066 Msa0169140:three_prime_UTR 45.0%
TGTTTCCCTCCTTGATTGCT+AGG + chr1_4:52279126-52279145 Msa0169140:intron 45.0%
GGCTGTATACCTAGCAATCA+AGG - chr1_4:52279138-52279157 None:intergenic 45.0%
CCTAAACAAAGCCAGAGTTC+AGG - chr1_4:52279170-52279189 None:intergenic 45.0%
!! CCTGAACTCTGGCTTTGTTT+AGG + chr1_4:52279167-52279186 Msa0169140:three_prime_UTR 45.0%
!! GAACTCTGGCTTTGTTTAGG+AGG + chr1_4:52279170-52279189 Msa0169140:three_prime_UTR 45.0%
GTCCATCATTCTGTACATGC+AGG + chr1_4:52279201-52279220 Msa0169140:three_prime_UTR 45.0%
GTCCTGCATGTACAGAATGA+TGG - chr1_4:52279206-52279225 None:intergenic 45.0%
CCTATTCTCTGCAGAATGCA+GGG + chr1_4:52279305-52279324 Msa0169140:three_prime_UTR 45.0%
AGTCGTTGTAGAGTTGTCAG+AGG + chr1_4:52279335-52279354 Msa0169140:three_prime_UTR 45.0%
TCTCCCATACATTGTTTGCC+TGG + chr1_4:52279532-52279551 Msa0169140:three_prime_UTR 45.0%
CTCCCATACATTGTTTGCCT+GGG + chr1_4:52279533-52279552 Msa0169140:three_prime_UTR 45.0%
AGTTGGCATACCAAATACCC+AGG - chr1_4:52279553-52279572 None:intergenic 45.0%
!! CCACACGGTTTTATGCAAGA+AGG - chr1_4:52279628-52279647 None:intergenic 45.0%
CCTTCTTGCATAAAACCGTG+TGG + chr1_4:52279625-52279644 Msa0169140:three_prime_UTR 45.0%
TATCAAACCACTGTCCCACA+CGG - chr1_4:52279643-52279662 None:intergenic 45.0%
GTGCATTACCTCAAGCTTCT+GGG - chr1_4:52279723-52279742 None:intergenic 45.0%
TGTGCATTACCTCAAGCTTC+TGG - chr1_4:52279724-52279743 None:intergenic 45.0%
AAACGGCTGCAAAGGATGAA+GGG - chr1_4:52279799-52279818 None:intergenic 45.0%
!! TTTGTAAATTATAAATTATA+TGG + chr1_4:52267353-52267372 Msa0169140:intron 5.0%
!!! ATATTTTGTTATATAATATA+TGG + chr1_4:52272011-52272030 Msa0169140:intron 5.0%
!!! AAATATTATATTTTGTATTT+AGG - chr1_4:52275260-52275279 None:intergenic 5.0%
!! TTGTATTATTATATTATATT+GGG - chr1_4:52276653-52276672 None:intergenic 5.0%
!! ATTGTATTATTATATTATAT+TGG - chr1_4:52276654-52276673 None:intergenic 5.0%
AACTTTCCATTGACGAGCGG+CGG - chr1_4:52264478-52264497 None:intergenic 50.0%
GCCAACTTTCCATTGACGAG+CGG - chr1_4:52264481-52264500 None:intergenic 50.0%
TGAATAGCAGTTACCGTGGC+AGG - chr1_4:52264543-52264562 None:intergenic 50.0%
!! TCGAGTTTGTTGCTTGTGGC+AGG + chr1_4:52265785-52265804 Msa0169140:intron 50.0%
TGTTGCGAGAGTCAGCTTGT+CGG + chr1_4:52266335-52266354 Msa0169140:intron 50.0%
CAGCAAAGAGACAGAGCTAG+CGG + chr1_4:52267067-52267086 Msa0169140:CDS 50.0%
CGACATGGGGAAATTGGATC+TGG + chr1_4:52267127-52267146 Msa0169140:CDS 50.0%
ATGGGGAAATTGGATCTGGC+TGG + chr1_4:52267131-52267150 Msa0169140:CDS 50.0%
GAAATTGGATCTGGCTGGAG+AGG + chr1_4:52267136-52267155 Msa0169140:CDS 50.0%
! CTCCCTTTTGGCGGAAAACA+TGG - chr1_4:52267182-52267201 None:intergenic 50.0%
! CATGTTTTCCGCCAAAAGGG+AGG + chr1_4:52267180-52267199 Msa0169140:intron 50.0%
! CACAGTTTCCTCCCTTTTGG+CGG - chr1_4:52267191-52267210 None:intergenic 50.0%
! CTCCACAGTTTCCTCCCTTT+TGG - chr1_4:52267194-52267213 None:intergenic 50.0%
CAAAAGGGAGGAAACTGTGG+AGG + chr1_4:52267192-52267211 Msa0169140:intron 50.0%
GGAAACTGTGGAGGATCCAT+AGG + chr1_4:52267201-52267220 Msa0169140:intron 50.0%
TGTGAAGCCTTCCAAGCCTA+TGG - chr1_4:52267220-52267239 None:intergenic 50.0%
ATAGGCTTGGAAGGCTTCAC+AGG + chr1_4:52267219-52267238 Msa0169140:intron 50.0%
AGCAACGGTAACCACATGGA+AGG + chr1_4:52267442-52267461 Msa0169140:intron 50.0%
GCAACGGTAACCACATGGAA+GGG + chr1_4:52267443-52267462 Msa0169140:intron 50.0%
!! GTTCTGGTTTCCCTTCCATG+TGG - chr1_4:52267456-52267475 None:intergenic 50.0%
ACTGTACTTCAGATGCGGTG+CGG + chr1_4:52267564-52267583 Msa0169140:intron 50.0%
! GGCATCTTTTTCCTGCGGTT+TGG + chr1_4:52267585-52267604 Msa0169140:intron 50.0%
!! GAGAAAAAGCACCAAACCGC+AGG - chr1_4:52267599-52267618 None:intergenic 50.0%
AACAAGATGAACCACCTGCC+AGG - chr1_4:52267870-52267889 None:intergenic 50.0%
AGTAGTCACTGGCCCTTCAT+GGG - chr1_4:52267938-52267957 None:intergenic 50.0%
! AGTGGCTAGTCAGTAGTCAC+TGG - chr1_4:52267949-52267968 None:intergenic 50.0%
CTTGGAGGTCATGGTCACTA+TGG - chr1_4:52268212-52268231 None:intergenic 50.0%
CATAGTGACCATGACCTCCA+AGG + chr1_4:52268210-52268229 Msa0169140:intron 50.0%
CATGGTAACCTTGGAGGTCA+TGG - chr1_4:52268221-52268240 None:intergenic 50.0%
GACCTCCAAGGTTACCATGA+TGG + chr1_4:52268222-52268241 Msa0169140:intron 50.0%
GCAGTCCGCCAAAGAAAGTT+GGG - chr1_4:52268333-52268352 None:intergenic 50.0%
TGCAGTCCGCCAAAGAAAGT+TGG - chr1_4:52268334-52268353 None:intergenic 50.0%
CTCGGTAAATGAGGGGCTTA+GGG - chr1_4:52268384-52268403 None:intergenic 50.0%
TCTCGGTAAATGAGGGGCTT+AGG - chr1_4:52268385-52268404 None:intergenic 50.0%
TTTGTGCGCGTTTGTCTCAG+AGG + chr1_4:52268724-52268743 Msa0169140:intron 50.0%
TTGTGCGCGTTTGTCTCAGA+GGG + chr1_4:52268725-52268744 Msa0169140:intron 50.0%
AAAGGCGGTAAGACGCAGAA+AGG - chr1_4:52268758-52268777 None:intergenic 50.0%
! GCCTTCCTTAAGCCTTGTGA+TGG + chr1_4:52268960-52268979 Msa0169140:intron 50.0%
CCCATCACAAGGCTTAAGGA+AGG - chr1_4:52268964-52268983 None:intergenic 50.0%
CATCCCCATCACAAGGCTTA+AGG - chr1_4:52268968-52268987 None:intergenic 50.0%
! CTTAAGCCTTGTGATGGGGA+TGG + chr1_4:52268966-52268985 Msa0169140:intron 50.0%
GCCTCATCTTAGTCGCAAGT+AGG - chr1_4:52268997-52269016 None:intergenic 50.0%
ACTTGCGACTAAGATGAGGC+AGG + chr1_4:52268997-52269016 Msa0169140:intron 50.0%
CGACTTTGTTCGTGCTGTGA+AGG + chr1_4:52269936-52269955 Msa0169140:CDS 50.0%
CTTGGTGAAGCTAACTGTGG+TGG + chr1_4:52270000-52270019 Msa0169140:CDS 50.0%
!! CCTGGGCTGCATTGGTTAAT+TGG - chr1_4:52270416-52270435 None:intergenic 50.0%
CCAATTAACCAATGCAGCCC+AGG + chr1_4:52270413-52270432 Msa0169140:CDS 50.0%
CCTTCTAACAGATGCACCCT+GGG - chr1_4:52270433-52270452 None:intergenic 50.0%
TCCTTCTAACAGATGCACCC+TGG - chr1_4:52270434-52270453 None:intergenic 50.0%
GGTCTTGAATGGTAGCATGG+AGG + chr1_4:52270515-52270534 Msa0169140:CDS 50.0%
GCCAACCATTAGAGTTGAGG+AGG + chr1_4:52270752-52270771 Msa0169140:CDS 50.0%
ACTTGCCCCTTGTGAAACGA+TGG + chr1_4:52270862-52270881 Msa0169140:CDS 50.0%
GCCTCCATTCTCACAATTGG+AGG - chr1_4:52271000-52271019 None:intergenic 50.0%
AATGGAGGCTCTGCTGATGT+AGG + chr1_4:52271011-52271030 Msa0169140:CDS 50.0%
GTAGGCTCATCTGTCCTGAT+TGG + chr1_4:52271029-52271048 Msa0169140:CDS 50.0%
!! CTGACATGGCCTCTAAAGCA+CGG - chr1_4:52271187-52271206 None:intergenic 50.0%
CAAAAGTTCGATGCCTGTGG+TGG + chr1_4:52271347-52271366 Msa0169140:CDS 50.0%
AGAAGAATCACCACCACCAC+AGG - chr1_4:52271363-52271382 None:intergenic 50.0%
AAGTGGATGAGCTGTCATCC+AGG + chr1_4:52271453-52271472 Msa0169140:CDS 50.0%
AGTTTCTTGTGGCTGGAACC+TGG - chr1_4:52271474-52271493 None:intergenic 50.0%
AGGTTCCAGCCACAAGAAAC+TGG + chr1_4:52271473-52271492 Msa0169140:CDS 50.0%
TCTTGCCAGTTTCTTGTGGC+TGG - chr1_4:52271481-52271500 None:intergenic 50.0%
! TTTGGTGGTAATGACAGGGC+AGG - chr1_4:52271656-52271675 None:intergenic 50.0%
GATCCGCCTCAAAATGAGGT+TGG + chr1_4:52271800-52271819 Msa0169140:CDS 50.0%
CAGGAGCGAGTTCGTAAAAG+AGG + chr1_4:52272219-52272238 Msa0169140:intron 50.0%
! CTGGGTCAAAAGGCTGTTTC+GGG + chr1_4:52272295-52272314 Msa0169140:CDS 50.0%
TCAAGTCCATCCCTGACAGA+TGG + chr1_4:52272325-52272344 Msa0169140:CDS 50.0%
CAAGTCCATCCCTGACAGAT+GGG + chr1_4:52272326-52272345 Msa0169140:CDS 50.0%
AAGTCCATCCCTGACAGATG+GGG + chr1_4:52272327-52272346 Msa0169140:CDS 50.0%
TTGGAGGTGATCCTTGTGGA+AGG - chr1_4:52272360-52272379 None:intergenic 50.0%
GTGTTTGGAGGTGATCCTTG+TGG - chr1_4:52272364-52272383 None:intergenic 50.0%
TGTAGTCAGTAGTGGCTGTG+CGG + chr1_4:52274351-52274370 Msa0169140:intron 50.0%
TGCCGTACTGTAGTCAGTAG+TGG + chr1_4:52274613-52274632 Msa0169140:intron 50.0%
GTCCAAAAAACCGCGACTAG+GGG - chr1_4:52274675-52274694 None:intergenic 50.0%
CGTCCAAAAAACCGCGACTA+GGG - chr1_4:52274676-52274695 None:intergenic 50.0%
ACGTCCAAAAAACCGCGACT+AGG - chr1_4:52274677-52274696 None:intergenic 50.0%
ATGAAGTCACGCTGCATAGC+GGG - chr1_4:52274883-52274902 None:intergenic 50.0%
CATGAAGTCACGCTGCATAG+CGG - chr1_4:52274884-52274903 None:intergenic 50.0%
GAGCAGTGAAGAGAAAGCCA+AGG - chr1_4:52275238-52275257 None:intergenic 50.0%
ATGGTTATGGGAGAGAGGGA+GGG - chr1_4:52276055-52276074 None:intergenic 50.0%
AATGGTTATGGGAGAGAGGG+AGG - chr1_4:52276056-52276075 None:intergenic 50.0%
CAGTTGTGTGGGGTTGTGTA+AGG - chr1_4:52276320-52276339 None:intergenic 50.0%
CTTACACAACCCCACACAAC+TGG + chr1_4:52276318-52276337 Msa0169140:intron 50.0%
TCTCACAAGCCAGTTGTGTG+GGG - chr1_4:52276330-52276349 None:intergenic 50.0%
CATCTCACAAGCCAGTTGTG+TGG - chr1_4:52276332-52276351 None:intergenic 50.0%
!! CACAACTGGCTTGTGAGATG+AGG + chr1_4:52276332-52276351 Msa0169140:intron 50.0%
CTATACACACACGCACACAG+AGG - chr1_4:52276399-52276418 None:intergenic 50.0%
CTGAATCAAGTCTGCATCGG+AGG + chr1_4:52276969-52276988 Msa0169140:CDS 50.0%
AGGTAGGACTGCTTGGATAG+CGG - chr1_4:52277187-52277206 None:intergenic 50.0%
ATAGTCGAGGTAGGACTGCT+TGG - chr1_4:52277194-52277213 None:intergenic 50.0%
ACGGCAGCAGATAATAGTCG+AGG - chr1_4:52277207-52277226 None:intergenic 50.0%
TTCTCCTGTGCAGCATTTCC+GGG - chr1_4:52277234-52277253 None:intergenic 50.0%
GTTCTCCTGTGCAGCATTTC+CGG - chr1_4:52277235-52277254 None:intergenic 50.0%
! CGGATATGATGGCGAACCAT+GGG - chr1_4:52277426-52277445 None:intergenic 50.0%
CCATGGTTCGCCATCATATC+CGG + chr1_4:52277424-52277443 Msa0169140:intron 50.0%
CATGGTTCGCCATCATATCC+GGG + chr1_4:52277425-52277444 Msa0169140:intron 50.0%
TCGCCATCATATCCGGGAAT+TGG + chr1_4:52277431-52277450 Msa0169140:intron 50.0%
TATCATCACTGCTGGGAGTG+TGG + chr1_4:52277601-52277620 Msa0169140:intron 50.0%
GATTGAGGCACAAGCTGATG+TGG - chr1_4:52277956-52277975 None:intergenic 50.0%
ACAAGATGTGGCATAGGAGG+TGG - chr1_4:52278031-52278050 None:intergenic 50.0%
AGACAACCCACTTCACCCTA+TGG + chr1_4:52278219-52278238 Msa0169140:CDS 50.0%
GCTGATCCATAGGGTGAAGT+GGG - chr1_4:52278228-52278247 None:intergenic 50.0%
!! CCCTATATTCTGGGGCATGA+TGG - chr1_4:52278297-52278316 None:intergenic 50.0%
CTATTGGAGTAAGGAGGAGG+TGG - chr1_4:52278511-52278530 None:intergenic 50.0%
CACCTCCTCCTTACTCCAAT+AGG + chr1_4:52278509-52278528 Msa0169140:CDS 50.0%
TGCCTATTGGAGTAAGGAGG+AGG - chr1_4:52278514-52278533 None:intergenic 50.0%
ATCTTACCGGGATAAGGTGG+GGG - chr1_4:52278634-52278653 None:intergenic 50.0%
CCAATCTTACCGGGATAAGG+TGG - chr1_4:52278637-52278656 None:intergenic 50.0%
CCACCTTATCCCGGTAAGAT+TGG + chr1_4:52278634-52278653 Msa0169140:intron 50.0%
CCGTGATCTGGTATTCTAGG+TGG - chr1_4:52278799-52278818 None:intergenic 50.0%
CACCCGTGATCTGGTATTCT+AGG - chr1_4:52278802-52278821 None:intergenic 50.0%
CTAGAATACCAGATCACGGG+TGG + chr1_4:52278800-52278819 Msa0169140:CDS 50.0%
GCATACCAGACTTGGATCCT+TGG - chr1_4:52279055-52279074 None:intergenic 50.0%
GTACATGCAGGACTCCTTTG+AGG + chr1_4:52279213-52279232 Msa0169140:three_prime_UTR 50.0%
GCCTATTCTCTGCAGAATGC+AGG + chr1_4:52279304-52279323 Msa0169140:three_prime_UTR 50.0%
CCCTGCATTCTGCAGAGAAT+AGG - chr1_4:52279308-52279327 None:intergenic 50.0%
CATAAAACCGTGTGGGACAG+TGG + chr1_4:52279633-52279652 Msa0169140:three_prime_UTR 50.0%
ACATTGGACCCAGAAGCTTG+AGG + chr1_4:52279712-52279731 Msa0169140:three_prime_UTR 50.0%
CAAACGGCTGCAAAGGATGA+AGG - chr1_4:52279800-52279819 None:intergenic 50.0%
! TTTCTCCGGCTAGGTGCCAT+CGG - chr1_4:52264426-52264445 None:intergenic 55.0%
ATGGCACCTAGCCGGAGAAA+AGG + chr1_4:52264426-52264445 Msa0169140:CDS 55.0%
GCCGCTCGTCAATGGAAAGT+TGG + chr1_4:52264477-52264496 Msa0169140:CDS 55.0%
GTGGAGTAACCCCACTTCTC+CGG - chr1_4:52265819-52265838 None:intergenic 55.0%
!! CGCTAGCTCTGTCTCTTTGC+TGG - chr1_4:52267069-52267088 None:intergenic 55.0%
AGTCTAGCCTGCATTCAGGC+AGG + chr1_4:52267104-52267123 Msa0169140:CDS 55.0%
TGCATTCAGGCAGGCGACAT+GGG + chr1_4:52267113-52267132 Msa0169140:CDS 55.0%
ATTGGATCTGGCTGGAGAGG+AGG + chr1_4:52267139-52267158 Msa0169140:CDS 55.0%
TGGAGAGGAGGTTGCGATGT+AGG + chr1_4:52267151-52267170 Msa0169140:intron 55.0%
CGCCAAAAGGGAGGAAACTG+TGG + chr1_4:52267189-52267208 Msa0169140:intron 55.0%
CTGTGGAGGATCCATAGGCT+TGG + chr1_4:52267206-52267225 Msa0169140:intron 55.0%
GGAGGATCCATAGGCTTGGA+AGG + chr1_4:52267210-52267229 Msa0169140:intron 55.0%
! GGTGCGGCATCTTTTTCCTG+CGG + chr1_4:52267580-52267599 Msa0169140:intron 55.0%
ACCAAGAAAAGTGGCCAGCC+TGG + chr1_4:52267849-52267868 Msa0169140:intron 55.0%
CAGTAGTCACTGGCCCTTCA+TGG - chr1_4:52267939-52267958 None:intergenic 55.0%
!! ATTCTGAGGTCATGGCAGGC+TGG + chr1_4:52268163-52268182 Msa0169140:intron 55.0%
GAAAGGCCATCCCCATCACA+AGG - chr1_4:52268975-52268994 None:intergenic 55.0%
!! CCATGGGTTGGTATGTCCAG+CGG + chr1_4:52270140-52270159 Msa0169140:CDS 55.0%
CTGTGGGGATAAGTCAGCAG+CGG - chr1_4:52270289-52270308 None:intergenic 55.0%
!! GCTGCTGACTTATCCCCACA+GGG + chr1_4:52270288-52270307 Msa0169140:CDS 55.0%
CCCAGGGTGCATCTGTTAGA+AGG + chr1_4:52270430-52270449 Msa0169140:CDS 55.0%
TTGAGGAGGAACCTGGTGTG+CGG + chr1_4:52270766-52270785 Msa0169140:CDS 55.0%
TGACTGGAATTCCGCACACC+AGG - chr1_4:52270780-52270799 None:intergenic 55.0%
GCTATTGAGCTCTCCCTCTG+TGG - chr1_4:52270913-52270932 None:intergenic 55.0%
GAGGAAGCTATCATCTGCGG+TGG - chr1_4:52270981-52271000 None:intergenic 55.0%
!! CGGTGAAGGCGTTTAGATGG+AGG - chr1_4:52271167-52271186 None:intergenic 55.0%
!! GCACGGTGAAGGCGTTTAGA+TGG - chr1_4:52271170-52271189 None:intergenic 55.0%
ACGCCTTCACCGTGCTTTAG+AGG + chr1_4:52271175-52271194 Msa0169140:CDS 55.0%
!! TGGCCTCTAAAGCACGGTGA+AGG - chr1_4:52271181-52271200 None:intergenic 55.0%
AAGTTCGATGCCTGTGGTGG+TGG + chr1_4:52271350-52271369 Msa0169140:CDS 55.0%
AGTCCATCCCTGACAGATGG+GGG + chr1_4:52272328-52272347 Msa0169140:CDS 55.0%
GCAATCTCCCCCATCTGTCA+GGG - chr1_4:52272338-52272357 None:intergenic 55.0%
! GCGGCCGCTATTGACTACTA+TGG - chr1_4:52273784-52273803 None:intergenic 55.0%
CGCTACGACGATTAGCGTAG+CGG - chr1_4:52273828-52273847 None:intergenic 55.0%
CGCTACGCTAATCGTCGTAG+CGG + chr1_4:52273826-52273845 Msa0169140:intron 55.0%
CAGTTGCTATAGCGGCGTAG+CGG + chr1_4:52273864-52273883 Msa0169140:intron 55.0%
! TCTCGGATAGCGGTGCATAG+CGG - chr1_4:52274299-52274318 None:intergenic 55.0%
ACGTTCCGCAACACCTGTAG+TGG - chr1_4:52274377-52274396 None:intergenic 55.0%
! CTACAGGTGTTGCGGAACGT+CGG + chr1_4:52274377-52274396 Msa0169140:intron 55.0%
! TACAGGTGTTGCGGAACGTC+GGG + chr1_4:52274378-52274397 Msa0169140:intron 55.0%
AGTGGTTGTGCGGCCACTAT+TGG + chr1_4:52274631-52274650 Msa0169140:intron 55.0%
ATCAAGTCTGCATCGGAGGG+TGG + chr1_4:52276973-52276992 Msa0169140:CDS 55.0%
ATGCTGCACAGGAGAACCGT+AGG + chr1_4:52277238-52277257 Msa0169140:CDS 55.0%
! CCGGATATGATGGCGAACCA+TGG - chr1_4:52277427-52277446 None:intergenic 55.0%
AGGCACAAGCTGATGTGGAG+GGG - chr1_4:52277951-52277970 None:intergenic 55.0%
GAGGCACAAGCTGATGTGGA+GGG - chr1_4:52277952-52277971 None:intergenic 55.0%
TGAGGCACAAGCTGATGTGG+AGG - chr1_4:52277953-52277972 None:intergenic 55.0%
! GGTGGTGGCATGGAAGATTG+AGG - chr1_4:52277971-52277990 None:intergenic 55.0%
AGATGTGGCATAGGAGGTGG+TGG - chr1_4:52278028-52278047 None:intergenic 55.0%
GGCTGATCCATAGGGTGAAG+TGG - chr1_4:52278229-52278248 None:intergenic 55.0%
TCACCCTATGGATCAGCCCT+TGG + chr1_4:52278231-52278250 Msa0169140:CDS 55.0%
CAGCCAAGGGCTGATCCATA+GGG - chr1_4:52278237-52278256 None:intergenic 55.0%
GCATGCAAGACATCGAAGGG+AGG + chr1_4:52278480-52278499 Msa0169140:CDS 55.0%
TTGGAGTAAGGAGGAGGTGG+TGG - chr1_4:52278508-52278527 None:intergenic 55.0%
TCTTACCGGGATAAGGTGGG+GGG - chr1_4:52278633-52278652 None:intergenic 55.0%
GGATGACACCCATATGGGGA+AGG - chr1_4:52278769-52278788 None:intergenic 55.0%
GGAAATCTCCACCCGTGATC+TGG - chr1_4:52278811-52278830 None:intergenic 55.0%
CTGTGATTCATTGACCGGGG+AGG - chr1_4:52278832-52278851 None:intergenic 55.0%
CTCCCCGGTCAATGAATCAC+AGG + chr1_4:52278830-52278849 Msa0169140:CDS 55.0%
! GCATGTCAGGTCCAGGCTTT+TGG + chr1_4:52279011-52279030 Msa0169140:intron 55.0%
! TGTCAGGTCCAGGCTTTTGG+CGG + chr1_4:52279014-52279033 Msa0169140:intron 55.0%
GGCCCAGGTGATAGTAACCA+AGG + chr1_4:52279035-52279054 Msa0169140:exon 55.0%
CCAGAGTTCAGGCCGAAAAG+AGG - chr1_4:52279159-52279178 None:intergenic 55.0%
! CCTCTTTTCGGCCTGAACTC+TGG + chr1_4:52279156-52279175 Msa0169140:three_prime_UTR 55.0%
! CATGCAGGACTCCTTTGAGG+AGG + chr1_4:52279216-52279235 Msa0169140:three_prime_UTR 55.0%
TTCTCTGCAGAATGCAGGGC+AGG + chr1_4:52279309-52279328 Msa0169140:three_prime_UTR 55.0%
CCATGCACACAGCCTTGAGT+TGG - chr1_4:52279570-52279589 None:intergenic 55.0%
CCAACTCAAGGCTGTGTGCA+TGG + chr1_4:52279567-52279586 Msa0169140:three_prime_UTR 55.0%
CTGTGTGCATGGCCTGTTAG+TGG + chr1_4:52279578-52279597 Msa0169140:three_prime_UTR 55.0%
CATCTGACCCATAGCGGCGT+CGG + chr1_4:52264394-52264413 Msa0169140:five_prime_UTR 60.0%
TTCCTCCGATGGCACCTAGC+CGG + chr1_4:52264418-52264437 Msa0169140:exon 60.0%
GCACCTAGCCGGAGAAAAGG+AGG + chr1_4:52264429-52264448 Msa0169140:CDS 60.0%
! CTGCCTCCTTTTCTCCGGCT+AGG - chr1_4:52264435-52264454 None:intergenic 60.0%
TTACCGTGGCAGGCCATGCA+GGG - chr1_4:52264533-52264552 None:intergenic 60.0%
CTTGTGGCAGGTCAGTGAGC+CGG + chr1_4:52265797-52265816 Msa0169140:intron 60.0%
AGGTCAGTGAGCCGGAGAAG+TGG + chr1_4:52265805-52265824 Msa0169140:intron 60.0%
GGTCAGTGAGCCGGAGAAGT+GGG + chr1_4:52265806-52265825 Msa0169140:intron 60.0%
GTCAGTGAGCCGGAGAAGTG+GGG + chr1_4:52265807-52265826 Msa0169140:CDS 60.0%
CATGTCGCCTGCCTGAATGC+AGG - chr1_4:52267114-52267133 None:intergenic 60.0%
CTGCATTCAGGCAGGCGACA+TGG + chr1_4:52267112-52267131 Msa0169140:CDS 60.0%
GCATTCAGGCAGGCGACATG+GGG + chr1_4:52267114-52267133 Msa0169140:CDS 60.0%
GGCAGGCGACATGGGGAAAT+TGG + chr1_4:52267121-52267140 Msa0169140:CDS 60.0%
!!! GCCAGGCTGGCCACTTTTCT+TGG - chr1_4:52267853-52267872 None:intergenic 60.0%
AGAAAAGTGGCCAGCCTGGC+AGG + chr1_4:52267853-52267872 Msa0169140:intron 60.0%
AGATGAACCACCTGCCAGGC+TGG - chr1_4:52267866-52267885 None:intergenic 60.0%
CCGCTGGACATACCAACCCA+TGG - chr1_4:52270143-52270162 None:intergenic 60.0%
!! TGGGTTGGTATGTCCAGCGG+AGG + chr1_4:52270143-52270162 Msa0169140:CDS 60.0%
!! CGCTGCTGACTTATCCCCAC+AGG + chr1_4:52270287-52270306 Msa0169140:CDS 60.0%
AGATGCACCCTGGGCTGCAT+TGG - chr1_4:52270424-52270443 None:intergenic 60.0%
TCTCCCCCATCTGTCAGGGA+TGG - chr1_4:52272334-52272353 None:intergenic 60.0%
GGCAATCTCCCCCATCTGTC+AGG - chr1_4:52272339-52272358 None:intergenic 60.0%
GGGGGAGATTGCCTTCCACA+AGG + chr1_4:52272346-52272365 Msa0169140:CDS 60.0%
CGCTAATCGTCGTAGCGGTG+CGG + chr1_4:52273831-52273850 Msa0169140:intron 60.0%
! TGCGGCCACTACAGGTGTTG+CGG + chr1_4:52274369-52274388 Msa0169140:intron 60.0%
! ACAGGTGTTGCGGAACGTCG+GGG + chr1_4:52274379-52274398 Msa0169140:intron 60.0%
!!! GGCCCCTAGTCGCGGTTTTT+TGG + chr1_4:52274670-52274689 Msa0169140:intron 60.0%
TTATCTGCTGCCGTGCCTCC+CGG + chr1_4:52277213-52277232 Msa0169140:CDS 60.0%
TGCAGCATTTCCGGGAGGCA+CGG - chr1_4:52277226-52277245 None:intergenic 60.0%
TCCTGTGCAGCATTTCCGGG+AGG - chr1_4:52277231-52277250 None:intergenic 60.0%
! TGATGGCGAACCATGGGCTC+TGG - chr1_4:52277420-52277439 None:intergenic 60.0%
CACAAGCTGATGTGGAGGGG+CGG - chr1_4:52277948-52277967 None:intergenic 60.0%
!! AGGGGCTAATGGTGGTGGCA+TGG - chr1_4:52277981-52278000 None:intergenic 60.0%
!! ATAGGAGGTGGTGGTGGAGG+AGG - chr1_4:52278019-52278038 None:intergenic 60.0%
! TGTGGCATAGGAGGTGGTGG+TGG - chr1_4:52278025-52278044 None:intergenic 60.0%
GCAGCCAAGGGCTGATCCAT+AGG - chr1_4:52278238-52278257 None:intergenic 60.0%
! CTACTCCTCGGTGCAGCCAA+GGG - chr1_4:52278250-52278269 None:intergenic 60.0%
TGATTCGACGGCACATGGCG+AGG - chr1_4:52278436-52278455 None:intergenic 60.0%
GATGTCCCCCCACCTTATCC+CGG + chr1_4:52278625-52278644 Msa0169140:CDS 60.0%
ACGGGTGGAGATTTCCTCCC+CGG + chr1_4:52278815-52278834 Msa0169140:CDS 60.0%
GAGGAAGCCGACGCCGCTAT+GGG - chr1_4:52264404-52264423 None:intergenic 65.0%
CTTCCCTGCATGGCCTGCCA+CGG + chr1_4:52264527-52264546 Msa0169140:CDS 65.0%
GTTACCGTGGCAGGCCATGC+AGG - chr1_4:52264534-52264553 None:intergenic 65.0%
AAAGTGGCCAGCCTGGCAGG+TGG + chr1_4:52267856-52267875 Msa0169140:intron 65.0%
GCAGCTGAGTCATCCTCCGC+TGG - chr1_4:52270159-52270178 None:intergenic 65.0%
AGTGGCTGTGCGGCCACTAC+AGG + chr1_4:52274361-52274380 Msa0169140:intron 65.0%
! AGTGTTGGGGCCCCTAGTCG+CGG + chr1_4:52274662-52274681 Msa0169140:intron 65.0%
GCCTCCCGGAAATGCTGCAC+AGG + chr1_4:52277227-52277246 Msa0169140:CDS 65.0%
! GGCGAACCATGGGCTCTGGT+AGG - chr1_4:52277416-52277435 None:intergenic 65.0%
AGCTGATGTGGAGGGGCGGA+TGG - chr1_4:52277944-52277963 None:intergenic 65.0%
GGTGGAGGGGCTAATGGTGG+TGG - chr1_4:52277986-52278005 None:intergenic 65.0%
GGAGGTGGAGGGGCTAATGG+TGG - chr1_4:52277989-52278008 None:intergenic 65.0%
GGTGGAGGTGGAGGGGCTAA+TGG - chr1_4:52277992-52278011 None:intergenic 65.0%
!! AGGTGGTGGTGGAGGTGGAG+GGG - chr1_4:52277999-52278018 None:intergenic 65.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG - chr1_4:52278000-52278019 None:intergenic 65.0%
!! GGCATAGGAGGTGGTGGTGG+AGG - chr1_4:52278022-52278041 None:intergenic 65.0%
ATCAGCCCTTGGCTGCACCG+AGG + chr1_4:52278242-52278261 Msa0169140:CDS 65.0%
! GCTACTCCTCGGTGCAGCCA+AGG - chr1_4:52278251-52278270 None:intergenic 65.0%
TTCGACGGCACATGGCGAGG+CGG - chr1_4:52278433-52278452 None:intergenic 65.0%
GGAGGAAGCCGACGCCGCTA+TGG - chr1_4:52264405-52264424 None:intergenic 70.0%
! CTCCGGCTAGGTGCCATCGG+AGG - chr1_4:52264423-52264442 None:intergenic 70.0%
CCATTGACGAGCGGCGGCAG+CGG - chr1_4:52264472-52264491 None:intergenic 70.0%
AGCGGCCGCGCGTAGTGTTG+CGG + chr1_4:52273795-52273814 Msa0169140:intron 70.0%
CGTCGCCGCAACACTACGCG+CGG - chr1_4:52273803-52273822 None:intergenic 70.0%
TGTGGAGGGGCGGATGGCAG+AGG - chr1_4:52277938-52277957 None:intergenic 70.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG - chr1_4:52278001-52278020 None:intergenic 70.0%
!! GGAGGAGGTGGTGGTGGAGG+TGG - chr1_4:52278004-52278023 None:intergenic 70.0%
!! GGTGGAGGAGGTGGTGGTGG+AGG - chr1_4:52278007-52278026 None:intergenic 70.0%
!! GGTGGTGGAGGAGGTGGTGG+TGG - chr1_4:52278010-52278029 None:intergenic 70.0%
!! GGTGGTGGTGGAGGAGGTGG+TGG - chr1_4:52278013-52278032 None:intergenic 70.0%
!! GGAGGTGGTGGTGGAGGAGG+TGG - chr1_4:52278016-52278035 None:intergenic 70.0%
! GTCCAGGCTTTTGGCGGCCC+AGG + chr1_4:52279020-52279039 Msa0169140:CDS 70.0%
CACCTGGGCCGCCAAAAGCC+TGG - chr1_4:52279025-52279044 None:intergenic 70.0%
!! GCGGCGTCGGCTTCCTCCGA+TGG + chr1_4:52264407-52264426 Msa0169140:exon 75.0%
TTGACGAGCGGCGGCAGCGG+CGG - chr1_4:52264469-52264488 None:intergenic 75.0%
CCGCTGCCGCCGCTCGTCAA+TGG + chr1_4:52264469-52264488 Msa0169140:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 52264163 52279917 52264163 ID=Msa0169140;Name=Msa0169140
chr1_4 mRNA 52264163 52279917 52264163 ID=Msa0169140-mRNA-1;Parent=Msa0169140;Name=Msa0169140-mRNA-1;_AED=0.08;_eAED=0.08;_QI=212|0.71|0.73|0.93|0.78|0.73|15|793|1443
chr1_4 exon 52264163 52264198 52264163 ID=Msa0169140-mRNA-1:exon:15410;Parent=Msa0169140-mRNA-1
chr1_4 exon 52264250 52264548 52264250 ID=Msa0169140-mRNA-1:exon:15411;Parent=Msa0169140-mRNA-1
chr1_4 exon 52265807 52265883 52265807 ID=Msa0169140-mRNA-1:exon:15412;Parent=Msa0169140-mRNA-1
chr1_4 exon 52266974 52267168 52266974 ID=Msa0169140-mRNA-1:exon:15413;Parent=Msa0169140-mRNA-1
chr1_4 exon 52269855 52271885 52269855 ID=Msa0169140-mRNA-1:exon:15414;Parent=Msa0169140-mRNA-1
chr1_4 exon 52272222 52272675 52272222 ID=Msa0169140-mRNA-1:exon:15415;Parent=Msa0169140-mRNA-1
chr1_4 exon 52276938 52277046 52276938 ID=Msa0169140-mRNA-1:exon:15416;Parent=Msa0169140-mRNA-1
chr1_4 exon 52277160 52277276 52277160 ID=Msa0169140-mRNA-1:exon:15417;Parent=Msa0169140-mRNA-1
chr1_4 exon 52277384 52277428 52277384 ID=Msa0169140-mRNA-1:exon:15418;Parent=Msa0169140-mRNA-1
chr1_4 exon 52277478 52277568 52277478 ID=Msa0169140-mRNA-1:exon:15419;Parent=Msa0169140-mRNA-1
chr1_4 exon 52277652 52278111 52277652 ID=Msa0169140-mRNA-1:exon:15420;Parent=Msa0169140-mRNA-1
chr1_4 exon 52278211 52278646 52278211 ID=Msa0169140-mRNA-1:exon:15421;Parent=Msa0169140-mRNA-1
chr1_4 exon 52278740 52278907 52278740 ID=Msa0169140-mRNA-1:exon:15422;Parent=Msa0169140-mRNA-1
chr1_4 exon 52279020 52279068 52279020 ID=Msa0169140-mRNA-1:exon:15423;Parent=Msa0169140-mRNA-1
chr1_4 exon 52279148 52279917 52279148 ID=Msa0169140-mRNA-1:exon:15424;Parent=Msa0169140-mRNA-1
chr1_4 five_prime_UTR 52264163 52264198 52264163 ID=Msa0169140-mRNA-1:five_prime_utr;Parent=Msa0169140-mRNA-1
chr1_4 five_prime_UTR 52264250 52264425 52264250 ID=Msa0169140-mRNA-1:five_prime_utr;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52264426 52264548 52264426 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52265807 52265883 52265807 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52266974 52267168 52266974 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52269855 52271885 52269855 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52272222 52272675 52272222 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52276938 52277046 52276938 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52277160 52277276 52277160 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52277384 52277428 52277384 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52277478 52277568 52277478 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52277652 52278111 52277652 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52278211 52278646 52278211 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52278740 52278907 52278740 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 CDS 52279020 52279045 52279020 ID=Msa0169140-mRNA-1:cds;Parent=Msa0169140-mRNA-1
chr1_4 three_prime_UTR 52279046 52279068 52279046 ID=Msa0169140-mRNA-1:three_prime_utr;Parent=Msa0169140-mRNA-1
chr1_4 three_prime_UTR 52279148 52279917 52279148 ID=Msa0169140-mRNA-1:three_prime_utr;Parent=Msa0169140-mRNA-1
Gene Sequence

>Msa0169140

ATGGCACCTAGCCGGAGAAAAGGAGGCAGTAAAGCAGCGGCCGCCGCTGCCGCCGCTCGTCAATGGAAAGTTGGCGATCTAGTTCTTGCTAAAGTTAAAGGCTTCCCTGCATGGCCTGCCACGGTCAGTGAGCCGGAGAAGTGGGGTTACTCCACTGATTTGAAGAAAGTGCTTGTTTTCTTTTTTGGAACCCAACAAATAACAACTAACAGAACAACTATAATACATACAACAGAAACTGGAACCAACTGCATAAATTCACACAGTCTAACATTCGCTGGATCTGAGTTTGCCAGCAAAGAGACAGAGCTAGCGGAAACAGTTGAAAATAGTCTAGCCTGCATTCAGGCAGGCGACATGGGGAAATTGGATCTGGCTGGAGAGGAGGTTGCGATTGCTTTCTGCAATCCTGCTGATGTCGAAGCATTTACCGAGGAGAAAAAACAATCTCTCGTCAAACGTCAAGGAAAGGGTGCCGACTTTGTTCGTGCTGTGAAGGAGATTGTCGATAGTTATGAGAAATTAAAAAAAGAGAGACAACTTGGTGAAGCTAACTGTGGTGGCAATGTTGCTGATGCAAATGTTTCAAAGCCATTCAACTCATACAACAAGGATCAGACAGATGCTCCTGCTTTATCGCCTACTTTACCTATGAAATCTTCAAATTCCGATATTGATAGCCATGGGTTGGTATGTCCAGCGGAGGATGACTCAGCTGCTGTATTGAAAGATGAATCTCATGATAACGAGGCATCAAAGGAGCTTACTGAGAATGTTGCTTCTGTACATTCGGCTAAGCCACTAACTTACTCTTCTCGAAAGAGATCCGCTGCTGACTTATCCCCACAGGGCTTCATAACAGATAGGCATATGCCAGTACGAAAGAATAGAAGCTCATCACGAGTCCAACCCTTTATGTTTCCATGTAATGACAGTGGAAAGAATGCTGGCAGCCAATTAACCAATGCAGCCCAGGGTGCATCTGTTAGAAGGAATAAACGTCTTAGGAAATCACCTGATCTTGCTGGTTGTAATGATTTTGATTCATCTGCTTTGGTCTTGAATGGTAGCATGGAGGACAAAGACAACAGCTCTGAAATTCTCACAAATGATTCTGATGAATTTAGTTTGAATGAGGGTAGTGCAATGGATTCAAATTTTAAACACACCGAAACTAGTGAATGCCCTGAAGAAGTTGAGCTGAACAAAGGCCTTGATCTTAAAATAAAGGGTGTGGTCAATAAGAAGAAAAGAAACCCAAATAGGAAGAGGGCAACCAATGATACTTCCAAGCCAACCATTAGAGTTGAGGAGGAACCTGGTGTGCGGAATTCCAGTCAAAGTTCCCAGAACATTTGCAGAAATTCCGAAGAGAGATGCTTTGAGCAAGATGGAGATGAACACTTGCCCCTTGTGAAACGATGGAGAGTCAGAATGGGTAAATCATCTTCCACAGAGGGAGAGCTCAATAGCATTCTACATACTCCAGGGAAAAGCTGTAAGGAAGATATTAACTCACCACCGCAGATGATAGCTTCCTCCAATTGTGAGAATGGAGGCTCTGCTGATGTAGGCTCATCTGTCCTGATTGGCACCATGAATAATGTTTCTCCTTCAAAGAATTGTACACCATGTTTTGAAAATCAGGTTTGTAATACTAAGAAAGATCAAACATTCTGCTCTGTGGACTGCGAAGCTGCTTTACCTCCATCTAAACGCCTTCACCGTGCTTTAGAGGCCATGTCAGCTAATGCTGCTGAAGAAGGTCAAGCTCATATAGAATCATCAGCCTCAAGAATGACATCAATTGCCACATGCTGTATATCTTCTATCAAGACAAGTCCAGATGTGGCTATTAATGATCATGAAGGTGGCAGTTTAGAGTTGCAAAAGTTCGATGCCTGTGGTGGTGGTGATTCTTCTCATATAATTGTGCATAGTTTGTCAGCTAATTCAAATCCGATGATTTCAACAGAGAATAAATTATCTAATCAAGTGGATGAGCTGTCATCCAGGTTCCAGCCACAAGAAACTGGCAAGAATGTTCTCCAATGTGCTGCAGATCAAATTGAAGAACTTAGTGATTTTGTGGTTAGTCACACTGCTAATGTGGATTTGAAAACTCAGGTGCATGGGGAAACTAATCCAAATCTTGATTCAAAATGTAATGAAGCTGAAAGCAATCACGATTCACCTGCCCTGTCATTACCACCAAATATTGAAGGCAATATTATAACATCGAATCATTCAAATACAACATCCAATACATCAGAGCACAATGGAATAAACCTTCATTCTGTGGCAGATGTGATGAAGAAAGAAATTATTTCCCCTAATATTGATCCGCCTCAAAATGAGGTTGGTGTTTCTGAGGGTACGAAGTGCTTGAAGCCAGCAGTAGATGATGTCTACAGAGCAAATGACATGAGCGAGTTCGTAAAAGAGGTAAAATGTGAAGGACCAGAGGAGGATTTGAATTCTGTTTCAACATCTGACTGTCTGGGTCAAAAGGCTGTTTCGGGCATTCGGTCAAGTCCATCCCTGACAGATGGGGGAGATTGCCTTCCACAAGGATCACCTCCAAACACGTCAATTTGCAATGTATCTACATCAGACAGTAGTAATATCCTTCACAATGGAAGTTGTAGTCCTGATGTACATTTGCACCAGAAACAAACTTTATCTGGTCCTGTCGATGAAAGTAAGTATGGATCTGAGGCAACTCAACAATCAAGATCAATGGGTAAGTCAACTGAAGCGGGACGTGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAGTATTGGCCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGATAAGGTCATGGAAATTCTTGCCGATAATCTTGAAACTGAATCAAGTCTGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCTATTGCACAGTTTTCTCGAGGTTTAAAAGGTGATGTTTGTTTAGTATATTCATCCGCTATCCAAGCAGTCCTACCTCGACTATTATCTGCTGCCGTGCCTCCCGGAAATGCTGCACAGGAGAACCGTAGGCAATGTCTTAAGGCAAGTTTTAAGGCTGTGGTTGGAGAGAAAAATCCTACCAGAGCCCATGGCGTCTATTCACGACGATCATTAAGAACAGAGAGGGCTTTGGATGACCCTATAAGAGAAATGGAGGGTATGCATGTTGACGAATATGGAAGCAACTCAAGTTTGCAGTTACCTGGATTTTGCATGCCTCGAATGCTTAAAGATGAAGATGACAATGAAGAGAGTGATTCTGATGGAGGCAATTTTGAGGCTGTCACACCTGAGCATAATTCTGAAGTACATGAAATGACTTCTATAATTGATAAACACAGGCATATCTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTGTCTCCCTCTCGTGATGTTGAAATGAATTCATTTTCCAATGTTGATAGAGGAAATGCCACAGAGTTTAACAATAATATTCCTCTGCCATCCGCCCCTCCACATCAGCTTGTGCCTCAATCTTCCATGCCACCACCATTAGCCCCTCCACCTCCACCACCACCTCCTCCACCACCACCTCCTATGCCACATCTTGTTTCATCTACCTCTGATCCATGCCATACTGTATTTAATTCTAGAGGTCATACAGAATCACAGCGTGTGAAAGACAACCCACTTCACCCTATGGATCAGCCCTTGGCTGCACCGAGGAGTAGCCAACCTATTAGTAATGCAGTGCACCATCATGCCCCAGAATATAGGGAAGCACACATTTCTGAGTCTGATCGCTCTTTCAACAGTTTCCCTGTACCGCATCCAGTAAATTATCGACATTCTGATGGTGTTACTATGCATGATAGAGGGCACTCTATAAGGCCGCCTCGCCATGTGCCGTCGAATCAGTTTTCTTTTGTTCATGGGGAACAGCATGCAAGACATCGAAGGGAGGTTCCACCACCTCCTCCTTACTCCAATAGGCAACATTTCGTGGAGAACATGGAGAGAGAACACTTCTACCATAATAATCACGAAAGATTAAAACCGCCTCCATATGATTATCGAGAGAGATGGGATGTCCCCCCACCTTATCCCGGTCCTAGGTATCATGACGAAGATATGCCTTCCCCATATGGGTGTCATCCATGTGAACCACCTAGAATACCAGATCACGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAACACCATGCCATTTAGACCACCCTTTGAAGATGCAATTCCAGTTACAAACAGAGGTCCAGGCTTTTGGCGGCCCAGGTGA
Protein sequence

>Msa0169140

MAPSRRKGGSKAAAAAAAARQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDLKKVLVFFFGTQQITTNRTTIIHTTETGTNCINSHSLTFAGSEFASKETELAETVENSLACIQAGDMGKLDLAGEEVAIAFCNPADVEAFTEEKKQSLVKRQGKGADFVRAVKEIVDSYEKLKKERQLGEANCGGNVADANVSKPFNSYNKDQTDAPALSPTLPMKSSNSDIDSHGLVCPAEDDSAAVLKDESHDNEASKELTENVASVHSAKPLTYSSRKRSAADLSPQGFITDRHMPVRKNRSSSRVQPFMFPCNDSGKNAGSQLTNAAQGASVRRNKRLRKSPDLAGCNDFDSSALVLNGSMEDKDNSSEILTNDSDEFSLNEGSAMDSNFKHTETSECPEEVELNKGLDLKIKGVVNKKKRNPNRKRATNDTSKPTIRVEEEPGVRNSSQSSQNICRNSEERCFEQDGDEHLPLVKRWRVRMGKSSSTEGELNSILHTPGKSCKEDINSPPQMIASSNCENGGSADVGSSVLIGTMNNVSPSKNCTPCFENQVCNTKKDQTFCSVDCEAALPPSKRLHRALEAMSANAAEEGQAHIESSASRMTSIATCCISSIKTSPDVAINDHEGGSLELQKFDACGGGDSSHIIVHSLSANSNPMISTENKLSNQVDELSSRFQPQETGKNVLQCAADQIEELSDFVVSHTANVDLKTQVHGETNPNLDSKCNEAESNHDSPALSLPPNIEGNIITSNHSNTTSNTSEHNGINLHSVADVMKKEIISPNIDPPQNEVGVSEGTKCLKPAVDDVYRANDMSEFVKEVKCEGPEEDLNSVSTSDCLGQKAVSGIRSSPSLTDGGDCLPQGSPPNTSICNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPVDESKYGSEATQQSRSMGKSTEAGRAALLYFEAMLGTLKRTKESIGRATRIAIDCAKFGIADKVMEILADNLETESSLHRRVDLFFLVDSIAQFSRGLKGDVCLVYSSAIQAVLPRLLSAAVPPGNAAQENRRQCLKASFKAVVGEKNPTRAHGVYSRRSLRTERALDDPIREMEGMHVDEYGSNSSLQLPGFCMPRMLKDEDDNEESDSDGGNFEAVTPEHNSEVHEMTSIIDKHRHILEDVDGELEMEDVSPSRDVEMNSFSNVDRGNATEFNNNIPLPSAPPHQLVPQSSMPPPLAPPPPPPPPPPPPPMPHLVSSTSDPCHTVFNSRGHTESQRVKDNPLHPMDQPLAAPRSSQPISNAVHHHAPEYREAHISESDRSFNSFPVPHPVNYRHSDGVTMHDRGHSIRPPRHVPSNQFSFVHGEQHARHRREVPPPPPYSNRQHFVENMEREHFYHNNHERLKPPPYDYRERWDVPPPYPGPRYHDEDMPSPYGCHPCEPPRIPDHGWRFPPRSMNHRNTMPFRPPFEDAIPVTNRGPGFWRPR*