Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216810 | XP_003596474.1 | 87.652 | 494 | 34 | 2 | 1 | 487 | 1 | 474 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216810 | sp|Q9FL69|AGD5_ARATH | 50.973 | 514 | 194 | 14 | 1 | 487 | 1 | 483 | 1.75e-142 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216810 | G7IR44 | 87.652 | 494 | 34 | 2 | 1 | 487 | 1 | 474 | 0.0 | 854 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017590 | Msa0216810 | 0.821602 | 3.700880e-53 | -8.615850e-47 |
| Msa0029020 | Msa0216810 | 0.829680 | 4.496242e-55 | -8.615850e-47 |
| Msa0038350 | Msa0216810 | 0.842418 | 2.617589e-58 | -8.615850e-47 |
| Msa0040550 | Msa0216810 | 0.801671 | 8.066907e-49 | -8.615850e-47 |
| Msa0043240 | Msa0216810 | 0.801395 | 9.188548e-49 | -8.615850e-47 |
| Msa0073820 | Msa0216810 | -0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0076650 | Msa0216810 | 0.821673 | 3.562139e-53 | -8.615850e-47 |
| Msa0079730 | Msa0216810 | 0.825109 | 5.606432e-54 | -8.615850e-47 |
| Msa0090040 | Msa0216810 | 0.833171 | 6.215673e-56 | -8.615850e-47 |
| Msa0101320 | Msa0216810 | 0.824208 | 9.144113e-54 | -8.615850e-47 |
| Msa0127580 | Msa0216810 | 0.804730 | 1.877445e-49 | -8.615850e-47 |
| Msa0137120 | Msa0216810 | 0.813666 | 2.280587e-51 | -8.615850e-47 |
| Msa0172180 | Msa0216810 | 0.839915 | 1.190386e-57 | -8.615850e-47 |
| Msa0198190 | Msa0216810 | 0.804876 | 1.750050e-49 | -8.615850e-47 |
| Msa0216810 | Msa0220970 | 0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0216810 | Msa0258670 | 0.807688 | 4.472166e-50 | -8.615850e-47 |
| Msa0216810 | Msa0258700 | 0.822107 | 2.827513e-53 | -8.615850e-47 |
| Msa0216810 | Msa0297950 | 0.820346 | 7.200435e-53 | -8.615850e-47 |
| Msa0216810 | Msa0298940 | -0.835298 | 1.820457e-56 | -8.615850e-47 |
| Msa0216810 | Msa0298970 | -0.806285 | 8.857994e-50 | -8.615850e-47 |
| Msa0216810 | Msa0335890 | 0.869763 | 2.425746e-66 | -8.615850e-47 |
| Msa0216810 | Msa0381580 | 0.807449 | 5.027066e-50 | -8.615850e-47 |
| Msa0216810 | Msa0405250 | 0.809500 | 1.835440e-50 | -8.615850e-47 |
| Msa0216810 | Msa0428510 | 0.854719 | 1.020543e-61 | -8.615850e-47 |
| Msa0216810 | Msa0526640 | 0.839504 | 1.523542e-57 | -8.615850e-47 |
| Msa0216810 | Msa0535050 | -0.800424 | 1.451004e-48 | -8.615850e-47 |
| Msa0216810 | Msa0547460 | 0.802325 | 5.918028e-49 | -8.615850e-47 |
| Msa0216810 | Msa0602210 | 0.804416 | 2.182659e-49 | -8.615850e-47 |
| Msa0216810 | Msa0619590 | 0.812453 | 4.207624e-51 | -8.615850e-47 |
| Msa0216810 | Msa0646570 | -0.812716 | 3.685744e-51 | -8.615850e-47 |
| Msa0216810 | Msa0659800 | 0.872122 | 4.051749e-67 | -8.615850e-47 |
| Msa0216810 | Msa0668090 | -0.805657 | 1.201032e-49 | -8.615850e-47 |
| Msa0216810 | Msa0683060 | 0.806167 | 9.381448e-50 | -8.615850e-47 |
| Msa0216810 | Msa0694690 | 0.816097 | 6.592664e-52 | -8.615850e-47 |
| Msa0216810 | Msa0707800 | 0.801997 | 6.913933e-49 | -8.615850e-47 |
| Msa0216810 | Msa0725480 | 0.830608 | 2.668385e-55 | -8.615850e-47 |
| Msa0216810 | Msa0766100 | 0.827889 | 1.219170e-54 | -8.615850e-47 |
| Msa0216810 | Msa0813320 | 0.854960 | 8.690722e-62 | -8.615850e-47 |
| Msa0216810 | Msa0882430 | 0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0216810 | Msa1004210 | -0.803100 | 4.095855e-49 | -8.615850e-47 |
| Msa0216810 | Msa1018020 | 0.856108 | 4.019216e-62 | -8.615850e-47 |
| Msa0216810 | Msa1046610 | -0.802716 | 4.917159e-49 | -8.615850e-47 |
| Msa0216810 | Msa1102170 | -0.801395 | 9.188317e-49 | -8.615850e-47 |
| Msa0216810 | Msa1116550 | -0.810175 | 1.313392e-50 | -8.615850e-47 |
| Msa0216810 | Msa1147980 | 0.848776 | 4.941130e-60 | -8.615850e-47 |
| Msa0216810 | Msa1171060 | 0.802144 | 6.448013e-49 | -8.615850e-47 |
| Msa0216810 | Msa1223460 | -0.820322 | 7.291486e-53 | -8.615850e-47 |
| Msa0216810 | Msa1265820 | 0.837332 | 5.532106e-57 | -8.615850e-47 |
| Msa0216810 | Msa1287090 | 0.841195 | 5.505169e-58 | -8.615850e-47 |
| Msa0216810 | Msa1345030 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa0216810 | Msa1371080 | 0.814228 | 1.714736e-51 | -8.615850e-47 |
| Msa0216810 | Msa1396750 | 0.822905 | 1.844259e-53 | -8.615850e-47 |
| Msa0216810 | Msa1422900 | -0.803443 | 3.477919e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216810 | MtrunA17_Chr2g0318391 | 87.652 | 494 | 34 | 2 | 1 | 487 | 1 | 474 | 0.0 | 854 |
| Msa0216810 | MtrunA17_Chr8g0360731 | 64.458 | 498 | 133 | 8 | 1 | 486 | 1 | 466 | 0.0 | 541 |
| Msa0216810 | MtrunA17_Chr6g0481511 | 42.125 | 273 | 115 | 8 | 1 | 270 | 18 | 250 | 6.36e-53 | 179 |
| Msa0216810 | MtrunA17_Chr2g0292461 | 38.346 | 133 | 56 | 2 | 13 | 138 | 15 | 128 | 1.50e-22 | 98.6 |
| Msa0216810 | MtrunA17_Chr4g0037651 | 38.065 | 155 | 54 | 7 | 18 | 153 | 484 | 615 | 8.12e-20 | 92.8 |
| Msa0216810 | MtrunA17_Chr3g0083541 | 35.461 | 141 | 65 | 3 | 19 | 152 | 54 | 175 | 2.18e-19 | 90.1 |
| Msa0216810 | MtrunA17_Chr8g0385781 | 34.783 | 161 | 58 | 4 | 14 | 145 | 492 | 634 | 9.46e-19 | 89.7 |
| Msa0216810 | MtrunA17_Chr8g0380371 | 58.491 | 53 | 22 | 0 | 16 | 68 | 9 | 61 | 4.71e-18 | 78.6 |
| Msa0216810 | MtrunA17_Chr8g0352731 | 38.346 | 133 | 55 | 3 | 28 | 152 | 6 | 119 | 8.34e-18 | 82.0 |
| Msa0216810 | MtrunA17_Chr3g0131671 | 37.762 | 143 | 68 | 7 | 19 | 145 | 500 | 637 | 3.53e-17 | 84.7 |
| Msa0216810 | MtrunA17_Chr7g0221441 | 34.356 | 163 | 56 | 6 | 14 | 145 | 500 | 642 | 3.98e-17 | 84.7 |
| Msa0216810 | MtrunA17_Chr8g0366731 | 43.038 | 79 | 44 | 1 | 18 | 96 | 12 | 89 | 8.49e-16 | 79.3 |
| Msa0216810 | MtrunA17_Chr1g0182571 | 42.500 | 80 | 45 | 1 | 17 | 96 | 5 | 83 | 1.08e-15 | 79.3 |
| Msa0216810 | MtrunA17_Chr7g0262921 | 41.463 | 82 | 44 | 1 | 19 | 100 | 7 | 84 | 2.45e-15 | 78.2 |
| Msa0216810 | MtrunA17_Chr8g0366741 | 46.667 | 75 | 38 | 2 | 23 | 96 | 16 | 89 | 5.81e-15 | 76.6 |
| Msa0216810 | MtrunA17_Chr6g0485101 | 26.705 | 176 | 113 | 5 | 12 | 187 | 8 | 167 | 1.71e-12 | 69.7 |
| Msa0216810 | MtrunA17_Chr8g0390701 | 28.736 | 174 | 106 | 6 | 14 | 186 | 10 | 166 | 2.89e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216810 | AT5G54310.1 | 50.973 | 514 | 194 | 14 | 1 | 487 | 1 | 483 | 1.78e-143 | 420 |
| Msa0216810 | AT3G17660.4 | 58.333 | 144 | 40 | 1 | 1 | 144 | 1 | 124 | 4.80e-52 | 174 |
| Msa0216810 | AT3G17660.1 | 58.333 | 144 | 40 | 1 | 1 | 144 | 1 | 124 | 1.07e-51 | 175 |
| Msa0216810 | AT3G17660.2 | 58.333 | 144 | 40 | 1 | 1 | 144 | 1 | 124 | 4.79e-51 | 174 |
| Msa0216810 | AT3G17660.3 | 59.028 | 144 | 29 | 2 | 1 | 144 | 1 | 114 | 1.81e-50 | 172 |
| Msa0216810 | AT4G05330.3 | 40.769 | 130 | 51 | 2 | 16 | 138 | 15 | 125 | 7.02e-24 | 102 |
| Msa0216810 | AT4G05330.1 | 40.769 | 130 | 51 | 2 | 16 | 138 | 15 | 125 | 7.02e-24 | 102 |
| Msa0216810 | AT4G21160.2 | 35.484 | 155 | 66 | 3 | 16 | 155 | 15 | 150 | 5.31e-22 | 97.4 |
| Msa0216810 | AT4G21160.3 | 35.484 | 155 | 66 | 3 | 16 | 155 | 15 | 150 | 5.31e-22 | 97.4 |
| Msa0216810 | AT4G21160.1 | 35.484 | 155 | 66 | 3 | 16 | 155 | 15 | 150 | 5.31e-22 | 97.4 |
| Msa0216810 | AT4G21160.4 | 35.484 | 155 | 66 | 3 | 16 | 155 | 15 | 150 | 5.31e-22 | 97.4 |
| Msa0216810 | AT3G07940.2 | 38.686 | 137 | 57 | 4 | 19 | 147 | 50 | 167 | 9.73e-20 | 89.4 |
| Msa0216810 | AT3G07940.1 | 38.686 | 137 | 57 | 4 | 19 | 147 | 50 | 167 | 2.93e-19 | 90.1 |
| Msa0216810 | AT3G17660.5 | 45.161 | 93 | 31 | 1 | 52 | 144 | 1 | 73 | 3.97e-18 | 83.2 |
| Msa0216810 | AT5G13300.1 | 30.539 | 167 | 68 | 4 | 14 | 152 | 499 | 645 | 4.43e-17 | 84.7 |
| Msa0216810 | AT3G53710.1 | 44.872 | 78 | 42 | 1 | 19 | 96 | 7 | 83 | 1.39e-16 | 82.4 |
| Msa0216810 | AT3G53710.3 | 44.872 | 78 | 42 | 1 | 19 | 96 | 7 | 83 | 1.39e-16 | 82.4 |
| Msa0216810 | AT3G53710.2 | 44.872 | 78 | 42 | 1 | 19 | 96 | 7 | 83 | 1.39e-16 | 82.4 |
| Msa0216810 | AT2G37550.2 | 43.902 | 82 | 42 | 1 | 19 | 100 | 7 | 84 | 2.06e-16 | 82.0 |
| Msa0216810 | AT2G37550.1 | 43.902 | 82 | 42 | 1 | 19 | 100 | 7 | 84 | 2.06e-16 | 82.0 |
| Msa0216810 | AT1G60860.1 | 37.795 | 127 | 55 | 6 | 1 | 125 | 453 | 557 | 4.12e-16 | 81.6 |
| Msa0216810 | AT1G60860.2 | 37.795 | 127 | 55 | 6 | 1 | 125 | 342 | 446 | 4.13e-16 | 81.6 |
| Msa0216810 | AT1G60860.3 | 37.795 | 127 | 55 | 6 | 1 | 125 | 282 | 386 | 5.31e-16 | 81.3 |
| Msa0216810 | AT2G35210.1 | 39.216 | 102 | 50 | 2 | 1 | 102 | 6 | 95 | 9.92e-16 | 79.3 |
| Msa0216810 | AT5G61980.1 | 41.818 | 110 | 42 | 4 | 13 | 120 | 495 | 584 | 1.33e-15 | 80.1 |
| Msa0216810 | AT2G35210.2 | 39.216 | 102 | 50 | 2 | 1 | 102 | 6 | 95 | 1.82e-15 | 78.6 |
| Msa0216810 | AT5G46750.1 | 51.667 | 60 | 29 | 0 | 18 | 77 | 12 | 71 | 9.24e-15 | 76.6 |
| Msa0216810 | AT1G10870.2 | 40.351 | 114 | 43 | 5 | 18 | 129 | 472 | 562 | 1.21e-14 | 77.0 |
| Msa0216810 | AT1G10870.1 | 41.818 | 110 | 37 | 6 | 18 | 125 | 472 | 556 | 1.50e-14 | 77.0 |
| Msa0216810 | AT4G17890.2 | 50.000 | 60 | 30 | 0 | 18 | 77 | 15 | 74 | 2.67e-14 | 75.1 |
| Msa0216810 | AT4G17890.1 | 50.000 | 60 | 30 | 0 | 18 | 77 | 15 | 74 | 3.27e-14 | 74.7 |
| Msa0216810 | AT4G05330.2 | 37.143 | 105 | 40 | 2 | 41 | 138 | 5 | 90 | 5.66e-13 | 70.1 |
| Msa0216810 | AT1G08680.4 | 26.374 | 182 | 115 | 5 | 8 | 187 | 4 | 168 | 1.08e-11 | 67.8 |
| Msa0216810 | AT1G08680.3 | 26.374 | 182 | 115 | 5 | 8 | 187 | 4 | 168 | 1.14e-11 | 67.4 |
| Msa0216810 | AT1G08680.1 | 26.374 | 182 | 115 | 5 | 8 | 187 | 4 | 168 | 1.19e-11 | 67.4 |
| Msa0216810 | AT1G08680.5 | 26.374 | 182 | 115 | 5 | 8 | 187 | 4 | 168 | 1.28e-11 | 67.4 |
| Msa0216810 | AT1G08680.2 | 26.374 | 182 | 115 | 5 | 8 | 187 | 4 | 168 | 1.35e-11 | 67.4 |
| Msa0216810 | AT4G13350.1 | 26.950 | 141 | 87 | 4 | 12 | 152 | 8 | 132 | 1.59e-11 | 67.0 |
| Msa0216810 | AT4G13350.2 | 26.950 | 141 | 87 | 4 | 12 | 152 | 8 | 132 | 1.59e-11 | 67.0 |
Find 159 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCCCCTCTCGTCTCTTTA+TGG | 0.118177 | 2_1:-62995983 | None:intergenic |
| ATCCAGTAGCCGGCCAATTT+TGG | 0.197676 | 2_1:-63000403 | None:intergenic |
| CCAATGTTTCTGTCCAAAAT+TGG | 0.244837 | 2_1:+63000390 | Msa0216810:CDS |
| TCCATTTGTTGCAGTTTCTA+TGG | 0.252468 | 2_1:+63001217 | Msa0216810:intron |
| CCGTTCATGGTGATTGCTTC+AGG | 0.262324 | 2_1:-62996097 | None:intergenic |
| AACGTTGGCCTTTCCGTTCA+TGG | 0.276363 | 2_1:-62996110 | None:intergenic |
| AAGTTTCAGCTTGTTGTTGC+GGG | 0.284159 | 2_1:-62999416 | None:intergenic |
| AGTAGCGCCCATTGGTGTTC+AGG | 0.303173 | 2_1:+63000439 | Msa0216810:CDS |
| TTCAGGAATACATCGAAGTT+TGG | 0.313410 | 2_1:+62997717 | Msa0216810:CDS |
| TAAGAATGAAATTTAGTATA+TGG | 0.315757 | 2_1:-63001674 | None:intergenic |
| AATTTCTCGTCTTATTATAT+AGG | 0.321816 | 2_1:-62995955 | None:intergenic |
| GCTACTGGATTCCCGATATC+TGG | 0.326788 | 2_1:+63000416 | Msa0216810:CDS |
| TGTTGCAGTTTCTATGGTAT+AGG | 0.341844 | 2_1:+63001223 | Msa0216810:intron |
| GTTGCAGTTTCTATGGTATA+GGG | 0.342366 | 2_1:+63001224 | Msa0216810:intron |
| GTGTTTGGCGTTAAGCTCTT+TGG | 0.344571 | 2_1:-62996134 | None:intergenic |
| ATATGCTGGTGTCATGTTCC+TGG | 0.348459 | 2_1:-63000579 | None:intergenic |
| TCAGGAATACATCGAAGTTT+GGG | 0.349680 | 2_1:+62997718 | Msa0216810:CDS |
| TGTTGTTGATGCATTGAAAA+TGG | 0.352663 | 2_1:-63000266 | None:intergenic |
| ATCGTACTCCTTTGCTGACT+TGG | 0.356774 | 2_1:-63001323 | None:intergenic |
| AGAAGAAACCTTCTTGTGTT+TGG | 0.357242 | 2_1:-62996149 | None:intergenic |
| GATGTTTGCAAAACAATGAT+TGG | 0.358036 | 2_1:+63001366 | Msa0216810:exon |
| TTTATATGCATGCAGTGTTC+AGG | 0.361700 | 2_1:+62997700 | Msa0216810:CDS |
| AGCAGTAGCACCAGCTGCTT+TGG | 0.362632 | 2_1:-62999541 | None:intergenic |
| TTAAATAGATCCTCAATTCC+AGG | 0.367006 | 2_1:-63000021 | None:intergenic |
| GTCCAAAATTGGCCGGCTAC+TGG | 0.376198 | 2_1:+63000401 | Msa0216810:CDS |
| ATGGGCGCTACTCCAGATAT+CGG | 0.380252 | 2_1:-63000428 | None:intergenic |
| CATTCCAGACCAAGGGCTAA+TGG | 0.384623 | 2_1:-62997770 | None:intergenic |
| GTTTGGTGGGCCAGTCTTCT+CGG | 0.390698 | 2_1:-62999971 | None:intergenic |
| CTACTGCTGATGATATTAAC+TGG | 0.391223 | 2_1:+62999556 | Msa0216810:CDS |
| GTGTGCTGAGGTTGGGTAGC+AGG | 0.392677 | 2_1:-62999372 | None:intergenic |
| TGCAAACATCCCTTGTGTTA+AGG | 0.395111 | 2_1:-63001353 | None:intergenic |
| GCTTGTTGTTGCGGGGCTAC+TGG | 0.400560 | 2_1:-62999408 | None:intergenic |
| GTCTGTAGCATAGTCTACTT+TGG | 0.402825 | 2_1:-62999475 | None:intergenic |
| TGAATGAATGCAACTTGCTC+TGG | 0.405598 | 2_1:-62998677 | None:intergenic |
| CTTTCTCAGTGTGCTGAGGT+TGG | 0.413347 | 2_1:-62999380 | None:intergenic |
| TCTGTTCAATATCCACCATC+TGG | 0.413856 | 2_1:+63000614 | Msa0216810:CDS |
| AACTCTCCCTGAACACCAAT+GGG | 0.414562 | 2_1:-63000446 | None:intergenic |
| TTTCTCAGTGTGCTGAGGTT+GGG | 0.420180 | 2_1:-62999379 | None:intergenic |
| TTCTTAAACTACCAGAGAAT+CGG | 0.422439 | 2_1:+62997439 | Msa0216810:CDS |
| TCAAATATGTAGATACTAGA+AGG | 0.430348 | 2_1:+62997414 | Msa0216810:intron |
| GTAGCAGGAACTGCATTTGA+TGG | 0.432002 | 2_1:-62999184 | None:intergenic |
| GTGTCAGCAGCCGAGAAGAC+TGG | 0.433480 | 2_1:+62999961 | Msa0216810:intron |
| CAGGAACTGCATTTGATGGT+TGG | 0.440758 | 2_1:-62999180 | None:intergenic |
| AAGAAGATCCAAGGTCAAAA+TGG | 0.445063 | 2_1:-62996019 | None:intergenic |
| TCAGCACATTCCCGATTCTC+TGG | 0.453000 | 2_1:-62997450 | None:intergenic |
| ACGAGAAAGCAAATAGCTAC+TGG | 0.453079 | 2_1:+62998827 | Msa0216810:CDS |
| TGCTATGTTCCATTAGCCCT+TGG | 0.454223 | 2_1:+62997761 | Msa0216810:CDS |
| TCCTCGCAAGGTACCGGAGC+AGG | 0.456370 | 2_1:+62999225 | Msa0216810:CDS |
| CTCGGCTGTTGCATGCTTGT+AGG | 0.458538 | 2_1:-63000365 | None:intergenic |
| TCCGGTACCTTGCGAGGAGC+TGG | 0.466604 | 2_1:-62999220 | None:intergenic |
| TGTTCCATTAGCCCTTGGTC+TGG | 0.467413 | 2_1:+62997766 | Msa0216810:CDS |
| GAGTTTCCTGCCGGATATGC+TGG | 0.468216 | 2_1:-63000593 | None:intergenic |
| CTTTGAGCTGTGTCGGTAGC+CGG | 0.468295 | 2_1:-62999444 | None:intergenic |
| TCCAGCTCCTCGCAAGGTAC+CGG | 0.471696 | 2_1:+62999219 | Msa0216810:CDS |
| GGAGTACTCTCAACTGCGTT+TGG | 0.475278 | 2_1:-62999988 | None:intergenic |
| TTGGAAGTGGTTGACGTCGC+TGG | 0.483654 | 2_1:-63001304 | None:intergenic |
| AACTGAATTAGCTCTACAAA+TGG | 0.486131 | 2_1:-63001500 | None:intergenic |
| TCTTAAACTACCAGAGAATC+GGG | 0.486903 | 2_1:+62997440 | Msa0216810:CDS |
| AAGACAAGAGATGGGTTTCA+AGG | 0.489668 | 2_1:+62999026 | Msa0216810:CDS |
| GAACATGACACCAGCATATC+CGG | 0.491572 | 2_1:+63000583 | Msa0216810:CDS |
| CTCCTTTGCTGACTTGGAAG+TGG | 0.493235 | 2_1:-63001317 | None:intergenic |
| TCTGTAGCATAGTCTACTTT+GGG | 0.494497 | 2_1:-62999474 | None:intergenic |
| AGAATATCAATTACCTGCTC+CGG | 0.496226 | 2_1:-62999238 | None:intergenic |
| TTCTCGTCTTATTATATAGG+AGG | 0.501758 | 2_1:-62995952 | None:intergenic |
| AAAGGTATGAAGACAAGAGA+TGG | 0.503168 | 2_1:+62999017 | Msa0216810:intron |
| CAACTCTCCCTGAACACCAA+TGG | 0.510285 | 2_1:-63000447 | None:intergenic |
| AGATGGGCAAGTGTAAATCT+TGG | 0.512108 | 2_1:+62997673 | Msa0216810:CDS |
| CCATAGACAACATGTTGAAA+AGG | 0.515436 | 2_1:-62999497 | None:intergenic |
| GCTGATGATATTAACTGGGC+AGG | 0.515453 | 2_1:+62999561 | Msa0216810:CDS |
| CAGAGGCCTGCAGAAAATAG+TGG | 0.520069 | 2_1:+62999106 | Msa0216810:CDS |
| GTTCTGCAACTCTTGACACT+TGG | 0.520216 | 2_1:+62998651 | Msa0216810:CDS |
| TACTCTCAACTGCGTTTGGT+GGG | 0.520948 | 2_1:-62999984 | None:intergenic |
| GTAGCGCCCATTGGTGTTCA+GGG | 0.522193 | 2_1:+63000440 | Msa0216810:CDS |
| ATTGGTTTGTTGAACAAGGC+TGG | 0.524556 | 2_1:+63001384 | Msa0216810:exon |
| AAGAGATGGGTTTCAAGGGA+TGG | 0.525253 | 2_1:+62999031 | Msa0216810:CDS |
| AGATTTACACTTGCCCATCT+CGG | 0.526067 | 2_1:-62997670 | None:intergenic |
| TACTATGCAGAGCTCCGAGA+TGG | 0.530220 | 2_1:+62997656 | Msa0216810:intron |
| CTTCAGGAACGAATCGGAAA+GGG | 0.531623 | 2_1:-62996081 | None:intergenic |
| ATCAGATAAAAGAGATGCAA+AGG | 0.532720 | 2_1:-63001615 | None:intergenic |
| GCTTAACGCCAAACACAAGA+AGG | 0.532957 | 2_1:+62996141 | Msa0216810:CDS |
| GTACTCTCAACTGCGTTTGG+TGG | 0.533340 | 2_1:-62999985 | None:intergenic |
| ACTGTCATCATACCATTGAC+TGG | 0.535539 | 2_1:-63001256 | None:intergenic |
| ACAGACCCACGGATTGGCCA+AGG | 0.535817 | 2_1:-63001474 | None:intergenic |
| CCTCCACATTACGATAGAGT+TGG | 0.536026 | 2_1:+62998862 | Msa0216810:CDS |
| TGATTTCTTCATTCATCAGA+AGG | 0.536803 | 2_1:+63001544 | Msa0216810:three_prime_UTR |
| TGATTCATACCTTCTCAAAG+AGG | 0.537549 | 2_1:-63000116 | None:intergenic |
| TGGGCGCTACTCCAGATATC+GGG | 0.537904 | 2_1:-63000427 | None:intergenic |
| TCTGTCTGCACCTGGAATTG+AGG | 0.538272 | 2_1:+63000011 | Msa0216810:CDS |
| TTCTATGGTATAGGGCAAGT+TGG | 0.538359 | 2_1:+63001232 | Msa0216810:CDS |
| GAAAATCGCTCCAAAGCAGC+TGG | 0.538743 | 2_1:+62999531 | Msa0216810:CDS |
| GAAGTTTCAGCTTGTTGTTG+CGG | 0.538836 | 2_1:-62999417 | None:intergenic |
| GGGCAAGTTGGTCCAGTCAA+TGG | 0.539479 | 2_1:+63001244 | Msa0216810:CDS |
| CGAGAAAGCAAATAGCTACT+GGG | 0.542617 | 2_1:+62998828 | Msa0216810:CDS |
| TGTTTCTGTCCAAAATTGGC+CGG | 0.548823 | 2_1:+63000394 | Msa0216810:CDS |
| GCAGGCCTCTGCTGATGTGA+AGG | 0.549126 | 2_1:-62999094 | None:intergenic |
| AGAGATGGGTTTCAAGGGAT+GGG | 0.550790 | 2_1:+62999032 | Msa0216810:CDS |
| GTAGCATAGTCTACTTTGGG+AGG | 0.551215 | 2_1:-62999471 | None:intergenic |
| AGTACTCCTCTGTCTGCACC+TGG | 0.551377 | 2_1:+63000003 | Msa0216810:CDS |
| GGAACCCTACGTCTTGTAGC+AGG | 0.553870 | 2_1:-62999199 | None:intergenic |
| AGACTGCTGCTGTGCTAGCA+TGG | 0.557012 | 2_1:-63000294 | None:intergenic |
| GTTAAGCTCTTTGGTAACGT+TGG | 0.558035 | 2_1:-62996125 | None:intergenic |
| TCAACTTTCTCAGTGTGCTG+AGG | 0.560105 | 2_1:-62999384 | None:intergenic |
| AGAAAACGAAAGCTTGAGAA+AGG | 0.560538 | 2_1:-62996051 | None:intergenic |
| AGCATAGTCTACTTTGGGAG+GGG | 0.560866 | 2_1:-62999469 | None:intergenic |
| AAATCACCCCAAGACAAAAG+AGG | 0.564127 | 2_1:-63001527 | None:intergenic |
| ACCTGCTCCGGTACCTTGCG+AGG | 0.564709 | 2_1:-62999226 | None:intergenic |
| AGGGGTACTTTGAGCTGTGT+CGG | 0.564760 | 2_1:-62999451 | None:intergenic |
| CTGTTCAATATCCACCATCT+GGG | 0.567420 | 2_1:+63000615 | Msa0216810:CDS |
| CCTGCAGAAAATAGTGGACA+TGG | 0.569275 | 2_1:+62999112 | Msa0216810:CDS |
| ACAAGCTGAAACTTCAAAGC+CGG | 0.570226 | 2_1:+62999425 | Msa0216810:CDS |
| AAGGTATGAAGACAAGAGAT+GGG | 0.572848 | 2_1:+62999018 | Msa0216810:intron |
| GATAAAAGAGATGCAAAGGA+AGG | 0.573518 | 2_1:-63001611 | None:intergenic |
| TGGTTTACAGACCCACGGAT+TGG | 0.574464 | 2_1:-63001480 | None:intergenic |
| ATATCTGGAGTAGCGCCCAT+TGG | 0.574958 | 2_1:+63000431 | Msa0216810:CDS |
| TAGCATAGTCTACTTTGGGA+GGG | 0.578912 | 2_1:-62999470 | None:intergenic |
| GCTGCTGCAGCTAAATCTAC+CGG | 0.584640 | 2_1:+63000326 | Msa0216810:CDS |
| TGGACAGAAACATTGGGACT+CGG | 0.586094 | 2_1:-63000383 | None:intergenic |
| AGAGTTGCAGAATCATATGC+AGG | 0.588172 | 2_1:+63000463 | Msa0216810:CDS |
| ACTATGCAGAGCTCCGAGAT+GGG | 0.588842 | 2_1:+62997657 | Msa0216810:intron |
| ACAGCAGCAGTCTCTTCTGA+TGG | 0.591192 | 2_1:+63000304 | Msa0216810:CDS |
| GTCAATGGTATGATGACAGT+GGG | 0.591988 | 2_1:+63001259 | Msa0216810:CDS |
| TATTGAACAGAGTTTCCTGC+CGG | 0.593808 | 2_1:-63000602 | None:intergenic |
| CCTGAAGCAATCACCATGAA+CGG | 0.594840 | 2_1:+62996097 | Msa0216810:exon |
| AGACAAGAGATGGGTTTCAA+GGG | 0.594902 | 2_1:+62999027 | Msa0216810:CDS |
| CAGGAATACATCGAAGTTTG+GGG | 0.597859 | 2_1:+62997719 | Msa0216810:CDS |
| TTATCTTCACGCAGTCCAGA+AGG | 0.598442 | 2_1:-62999067 | None:intergenic |
| AACCACTTCCAAGTCAGCAA+AGG | 0.599759 | 2_1:+63001315 | Msa0216810:CDS |
| GCTTCAGGAACGAATCGGAA+AGG | 0.601324 | 2_1:-62996082 | None:intergenic |
| TATAATGAGCCTCTTTGAGA+AGG | 0.605527 | 2_1:+63000107 | Msa0216810:CDS |
| ATTTCCATAAAGAGACGAGA+GGG | 0.609237 | 2_1:+62995979 | Msa0216810:five_prime_UTR |
| TGACAGACATTCCAGACCAA+GGG | 0.610040 | 2_1:-62997777 | None:intergenic |
| AAACATCCCTTGTGTTAAGG+AGG | 0.610584 | 2_1:-63001350 | None:intergenic |
| AGCAATCACCATGAACGGAA+AGG | 0.610926 | 2_1:+62996102 | Msa0216810:exon |
| GATATCGGGAATCCAGTAGC+CGG | 0.612970 | 2_1:-63000413 | None:intergenic |
| TAGGGTTCCAGCTCCTCGCA+AGG | 0.614792 | 2_1:+62999213 | Msa0216810:CDS |
| TGATTGCTTCAGGAACGAAT+CGG | 0.614852 | 2_1:-62996087 | None:intergenic |
| ATGACACCAGCATATCCGGC+AGG | 0.615567 | 2_1:+63000587 | Msa0216810:CDS |
| AATGATTGGTTTGTTGAACA+AGG | 0.618178 | 2_1:+63001380 | Msa0216810:exon |
| GACGTCGCTGGAGTTGACTG+AGG | 0.620712 | 2_1:-63001292 | None:intergenic |
| ACAAATGGTTTACAGACCCA+CGG | 0.621519 | 2_1:-63001485 | None:intergenic |
| AGTTCCTGCTACAAGACGTA+GGG | 0.629500 | 2_1:+62999195 | Msa0216810:CDS |
| TACTGCTGATGATATTAACT+GGG | 0.634184 | 2_1:+62999557 | Msa0216810:CDS |
| CAGACCCACGGATTGGCCAA+GGG | 0.639112 | 2_1:-63001473 | None:intergenic |
| TATTTCCATAAAGAGACGAG+AGG | 0.641306 | 2_1:+62995978 | Msa0216810:five_prime_UTR |
| AGTCCAACTCTATCGTAATG+TGG | 0.641617 | 2_1:-62998865 | None:intergenic |
| AGTTTCAGCTTGTTGTTGCG+GGG | 0.642861 | 2_1:-62999415 | None:intergenic |
| CTAGTGACATACCCAGATGG+TGG | 0.645472 | 2_1:-63000626 | None:intergenic |
| CAGTTCCTGCTACAAGACGT+AGG | 0.647490 | 2_1:+62999194 | Msa0216810:CDS |
| ATGACAGACATTCCAGACCA+AGG | 0.651466 | 2_1:-62997778 | None:intergenic |
| TCAATTCCAGGTGCAGACAG+AGG | 0.665056 | 2_1:-63000009 | None:intergenic |
| AATCTCCTTCACATCAGCAG+AGG | 0.669955 | 2_1:+62999089 | Msa0216810:CDS |
| AAAAGTATTCTCAGCAACAG+TGG | 0.676236 | 2_1:-62999140 | None:intergenic |
| AGTCAATGGTATGATGACAG+TGG | 0.678318 | 2_1:+63001258 | Msa0216810:CDS |
| TGCAGCTAAATCTACCGGTG+TGG | 0.679609 | 2_1:+63000331 | Msa0216810:CDS |
| TTTCCATAAAGAGACGAGAG+GGG | 0.681417 | 2_1:+62995980 | Msa0216810:five_prime_UTR |
| TAACTAGTGACATACCCAGA+TGG | 0.685152 | 2_1:-63000629 | None:intergenic |
| CCAACTCTATCGTAATGTGG+AGG | 0.685175 | 2_1:-62998862 | None:intergenic |
| AGGATACTTGAGATCCACAC+CGG | 0.731794 | 2_1:-63000345 | None:intergenic |
| AGGAATACATCGAAGTTTGG+GGG | 0.738285 | 2_1:+62997720 | Msa0216810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAATAAATAATCC+TGG | - | chr2_1:62997604-62997623 | None:intergenic | 10.0% |
| !!! | TATTTTTTTAATATTTCGTT+TGG | + | chr2_1:62998190-62998209 | Msa0216810:intron | 10.0% |
| !!! | ATAAATTCTTTTATTCTTAT+TGG | + | chr2_1:63000218-63000237 | Msa0216810:intron | 10.0% |
| !!! | ATTAATCAATTAGGATATTT+TGG | + | chr2_1:62996372-62996391 | Msa0216810:intron | 15.0% |
| !! | TATGTAAAATTAAATCCTAT+GGG | + | chr2_1:62996617-62996636 | Msa0216810:intron | 15.0% |
| !! | TCTTAAAAGTTATTCATATT+TGG | + | chr2_1:62997151-62997170 | Msa0216810:intron | 15.0% |
| !!! | TATTGAACAATTTTGTTTTT+AGG | + | chr2_1:62997334-62997353 | Msa0216810:intron | 15.0% |
| !!! | ATTTAGCATCAAAATTTTAA+GGG | - | chr2_1:62997838-62997857 | None:intergenic | 15.0% |
| !!! | TATTTAGCATCAAAATTTTA+AGG | - | chr2_1:62997839-62997858 | None:intergenic | 15.0% |
| !!! | TTATTTCTTGTTTATATCAA+GGG | - | chr2_1:62998123-62998142 | None:intergenic | 15.0% |
| !!! | TTTATTTCTTGTTTATATCA+AGG | - | chr2_1:62998124-62998143 | None:intergenic | 15.0% |
| !! | TGATATAAACAAGAAATAAA+TGG | + | chr2_1:62998124-62998143 | Msa0216810:intron | 15.0% |
| !! | CAATTAAAAAAATCATGTAT+CGG | + | chr2_1:62998476-62998495 | Msa0216810:intron | 15.0% |
| !!! | TATTTTAGAATTTCTTGTTT+TGG | + | chr2_1:62998785-62998804 | Msa0216810:intron | 15.0% |
| !!! | TTTATTTTGTTTTTGTAACA+AGG | + | chr2_1:62999265-62999284 | Msa0216810:intron | 15.0% |
| !!! | TTTTTCCTTTTTCTTTTTTA+AGG | - | chr2_1:62999607-62999626 | None:intergenic | 15.0% |
| !! | AAAAGGAAAAATAAATTCTA+TGG | + | chr2_1:62999616-62999635 | Msa0216810:intron | 15.0% |
| !!! | TAAAATGTTTTCTTAGTAAA+CGG | + | chr2_1:62999889-62999908 | Msa0216810:intron | 15.0% |
| !! | AAAAATTAGATGAAAATTAC+AGG | + | chr2_1:63001425-63001444 | Msa0216810:three_prime_UTR | 15.0% |
| !! | TAAGAATGAAATTTAGTATA+TGG | - | chr2_1:63001677-63001696 | None:intergenic | 15.0% |
| !!! | AATTTCTCGTCTTATTATAT+AGG | - | chr2_1:62995958-62995977 | None:intergenic | 20.0% |
| !!! | AATGTTAGTTTATTCTTAGT+TGG | + | chr2_1:62996313-62996332 | Msa0216810:intron | 20.0% |
| !! | GTATGTAAAATTAAATCCTA+TGG | + | chr2_1:62996616-62996635 | Msa0216810:intron | 20.0% |
| !! | TGTTTGAGTAATTGTAAATT+TGG | + | chr2_1:62996969-62996988 | Msa0216810:intron | 20.0% |
| !! | GTTTGAGTAATTGTAAATTT+GGG | + | chr2_1:62996970-62996989 | Msa0216810:intron | 20.0% |
| !!! | ATTGTAAATTTGGGATATTA+AGG | + | chr2_1:62996979-62996998 | Msa0216810:intron | 20.0% |
| !!! | TGTTTTATTGATATTTTGAG+TGG | + | chr2_1:62997105-62997124 | Msa0216810:intron | 20.0% |
| !! | TATAGTAAAAATTTCACAAG+TGG | + | chr2_1:62997873-62997892 | Msa0216810:intron | 20.0% |
| !! | ATAGTAAAAATTTCACAAGT+GGG | + | chr2_1:62997874-62997893 | Msa0216810:intron | 20.0% |
| !!! | ATGTGTCTAGTTTTTTTTTT+AGG | + | chr2_1:62998009-62998028 | Msa0216810:intron | 20.0% |
| !!! | TGTGTCTAGTTTTTTTTTTA+GGG | + | chr2_1:62998010-62998029 | Msa0216810:intron | 20.0% |
| !! | ATTCTCTACACTTAATAATT+TGG | + | chr2_1:62998060-62998079 | Msa0216810:intron | 20.0% |
| !!! | TATCATTTTCCTTATTTAAC+AGG | + | chr2_1:62998159-62998178 | Msa0216810:intron | 20.0% |
| !! | ATTACATTAGTATACAATGA+AGG | - | chr2_1:62998613-62998632 | None:intergenic | 20.0% |
| !! | AATGTAATTACTTTACTTTC+AGG | + | chr2_1:62998625-62998644 | Msa0216810:intron | 20.0% |
| !! | TATATGCAATAATTGAAATC+AGG | - | chr2_1:62998994-62999013 | None:intergenic | 20.0% |
| !! | CAATTATTGCATATACTTAA+AGG | + | chr2_1:62998999-62999018 | Msa0216810:intron | 20.0% |
| !!! | CCAAATTTAAAGTACAAAAA+GGG | - | chr2_1:62999300-62999319 | None:intergenic | 20.0% |
| !!! | TCCAAATTTAAAGTACAAAA+AGG | - | chr2_1:62999301-62999320 | None:intergenic | 20.0% |
| !!! | GAAATATTCATTTTGTAAAC+AGG | + | chr2_1:62999344-62999363 | Msa0216810:intron | 20.0% |
| !! | TATGTCCTTAAAAAAGAAAA+AGG | + | chr2_1:62999599-62999618 | Msa0216810:intron | 20.0% |
| !!! | TGTTTTCATTTTCAAATGTA+CGG | + | chr2_1:62999747-62999766 | Msa0216810:intron | 20.0% |
| !!! | CTATTTTCAAAGATTTCTAT+AGG | - | chr2_1:62999809-62999828 | None:intergenic | 20.0% |
| !!! | CTATAGAAATCTTTGAAAAT+AGG | + | chr2_1:62999807-62999826 | Msa0216810:intron | 20.0% |
| !!! | TCTATTTTTGACAAACATAA+TGG | - | chr2_1:63000864-63000883 | None:intergenic | 20.0% |
| !!! | TAATTTTTCTATATGCTACA+CGG | - | chr2_1:63001413-63001432 | None:intergenic | 20.0% |
| !!! | GTAAACATAATTTTGATGTT+TGG | + | chr2_1:63001639-63001658 | Msa0216810:three_prime_UTR | 20.0% |
| ! | TTATCGAAGAAGAATGAAAA+GGG | - | chr2_1:62996182-62996201 | None:intergenic | 25.0% |
| ! | ATTATCGAAGAAGAATGAAA+AGG | - | chr2_1:62996183-62996202 | None:intergenic | 25.0% |
| ! | AACAAAAATCGAAATGATGA+TGG | - | chr2_1:62996248-62996267 | None:intergenic | 25.0% |
| ! | TTAGTTTATTCTTAGTTGGT+AGG | + | chr2_1:62996317-62996336 | Msa0216810:intron | 25.0% |
| ! | TTTGTTCGGATTAATCAATT+AGG | + | chr2_1:62996363-62996382 | Msa0216810:intron | 25.0% |
| !! | TGAAAGATTATTTAGCTTCT+GGG | + | chr2_1:62996772-62996791 | Msa0216810:intron | 25.0% |
| ! | CTCATAACATCTTGAAAATA+AGG | - | chr2_1:62996816-62996835 | None:intergenic | 25.0% |
| !!! | AAAAACGGTTTAGAATTTTC+TGG | - | chr2_1:62996929-62996948 | None:intergenic | 25.0% |
| !!! | ATATATGTTGATGACAAGAA+AGG | + | chr2_1:62997044-62997063 | Msa0216810:intron | 25.0% |
| !!! | ATTGATATTTTGAGTGGAAA+AGG | + | chr2_1:62997111-62997130 | Msa0216810:intron | 25.0% |
| !! | TTAAGATATTTGTTACTGCA+AGG | - | chr2_1:62997227-62997246 | None:intergenic | 25.0% |
| ! | TCTTATGTTGAAAGGATTTA+AGG | - | chr2_1:62997288-62997307 | None:intergenic | 25.0% |
| ! | ATTGTAGTTCTTATGTTGAA+AGG | - | chr2_1:62997296-62997315 | None:intergenic | 25.0% |
| ! | TCAAATATGTAGATACTAGA+AGG | + | chr2_1:62997414-62997433 | Msa0216810:intron | 25.0% |
| ! | CAAGCAAATAGATACAAAAT+TGG | + | chr2_1:62997542-62997561 | Msa0216810:intron | 25.0% |
| ! | ATATTGTGAAATATCAGTAG+TGG | + | chr2_1:62997799-62997818 | Msa0216810:intron | 25.0% |
| ! | TTGTATAATATGGTGATTTG+TGG | + | chr2_1:62997900-62997919 | Msa0216810:intron | 25.0% |
| !! | CAATAACACATAATGTTTTG+TGG | + | chr2_1:62997937-62997956 | Msa0216810:intron | 25.0% |
| !!! | GTGTCTAGTTTTTTTTTTAG+GGG | + | chr2_1:62998011-62998030 | Msa0216810:intron | 25.0% |
| ! | AATAATGTGTCTAGTTGAAT+GGG | + | chr2_1:62998034-62998053 | Msa0216810:intron | 25.0% |
| ! | CTACACTTAATAATTTGGAT+AGG | + | chr2_1:62998065-62998084 | Msa0216810:intron | 25.0% |
| !! | CACTATAAAAACCAACATTT+TGG | - | chr2_1:62998549-62998568 | None:intergenic | 25.0% |
| !! | CCCTTTTTGTACTTTAAATT+TGG | + | chr2_1:62999297-62999316 | Msa0216810:intron | 25.0% |
| !!! | TCATTTTTAACATCTTTCTG+TGG | - | chr2_1:63000087-63000106 | None:intergenic | 25.0% |
| ! | TATATGCAATAGATTAGATG+TGG | - | chr2_1:63001155-63001174 | None:intergenic | 25.0% |
| ! | TTCTCGTCTTATTATATAGG+AGG | - | chr2_1:62995955-62995974 | None:intergenic | 30.0% |
| TATCGAAGAAGAATGAAAAG+GGG | - | chr2_1:62996181-62996200 | None:intergenic | 30.0% | |
| !! | AATACTTTTCTAGTGATGCA+TGG | + | chr2_1:62996399-62996418 | Msa0216810:intron | 30.0% |
| CAGTGCAAAAATTCTTCATA+TGG | + | chr2_1:62996457-62996476 | Msa0216810:intron | 30.0% | |
| TATGCAATGCATTCATTGAT+AGG | + | chr2_1:62996534-62996553 | Msa0216810:intron | 30.0% | |
| ATGCAATGCATTCATTGATA+GGG | + | chr2_1:62996535-62996554 | Msa0216810:intron | 30.0% | |
| TAAAAATGTGCATCATGAAG+TGG | + | chr2_1:62996558-62996577 | Msa0216810:intron | 30.0% | |
| AACTAGTATATCTTTCCCAT+AGG | - | chr2_1:62996635-62996654 | None:intergenic | 30.0% | |
| AAGGAAATATGGGAAACTAA+GGG | - | chr2_1:62996718-62996737 | None:intergenic | 30.0% | |
| AAAGGAAATATGGGAAACTA+AGG | - | chr2_1:62996719-62996738 | None:intergenic | 30.0% | |
| ! | AGTTTCCCATATTTCCTTTT+TGG | + | chr2_1:62996720-62996739 | Msa0216810:intron | 30.0% |
| ! | GTTTCCCATATTTCCTTTTT+GGG | + | chr2_1:62996721-62996740 | Msa0216810:intron | 30.0% |
| ! | TTTCCCATATTTCCTTTTTG+GGG | + | chr2_1:62996722-62996741 | Msa0216810:intron | 30.0% |
| ! | GTGAAAGATTATTTAGCTTC+TGG | + | chr2_1:62996771-62996790 | Msa0216810:intron | 30.0% |
| !! | TAAGTCATGGATTAGTCATT+TGG | + | chr2_1:62996873-62996892 | Msa0216810:intron | 30.0% |
| !! | AAGTCATGGATTAGTCATTT+GGG | + | chr2_1:62996874-62996893 | Msa0216810:intron | 30.0% |
| TACTCAAACAAGCAACTAAA+TGG | - | chr2_1:62996959-62996978 | None:intergenic | 30.0% | |
| ! | GTAAATTTGGGATATTAAGG+AGG | + | chr2_1:62996982-62997001 | Msa0216810:intron | 30.0% |
| ! | GAAGATGGATTCAGTTTAAT+TGG | + | chr2_1:62997186-62997205 | Msa0216810:intron | 30.0% |
| TTCTTAAACTACCAGAGAAT+CGG | + | chr2_1:62997439-62997458 | Msa0216810:CDS | 30.0% | |
| AAGCTAAGTATGTATTTGTC+TGG | + | chr2_1:62997478-62997497 | Msa0216810:intron | 30.0% | |
| ! | CAAAATTGGTTCTTGAAATG+TGG | + | chr2_1:62997556-62997575 | Msa0216810:intron | 30.0% |
| AAGTGGGCAATTGTATAATA+TGG | + | chr2_1:62997890-62997909 | Msa0216810:intron | 30.0% | |
| GAATAATGTGTCTAGTTGAA+TGG | + | chr2_1:62998033-62998052 | Msa0216810:intron | 30.0% | |
| ! | AGCTGATTTCCTGTTAAATA+AGG | - | chr2_1:62998171-62998190 | None:intergenic | 30.0% |
| ! | AAAACCAACATTTTGGACTT+AGG | - | chr2_1:62998542-62998561 | None:intergenic | 30.0% |
| CAAAAGTCATTGGAACTTAT+AGG | - | chr2_1:62998585-62998604 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTCTATTCAGCAAT+GGG | + | chr2_1:62998802-62998821 | Msa0216810:CDS | 30.0% |
| !! | CTGAGAATACTTTTGAAGAA+AGG | + | chr2_1:62999149-62999168 | Msa0216810:CDS | 30.0% |
| TACTGCTGATGATATTAACT+GGG | + | chr2_1:62999557-62999576 | Msa0216810:CDS | 30.0% | |
| !! | TGTTACTCGACATTTTGTTT+TGG | + | chr2_1:62999653-62999672 | Msa0216810:intron | 30.0% |
| !! | TGATTTTGTTGTGAAGAACT+TGG | + | chr2_1:62999697-62999716 | Msa0216810:intron | 30.0% |
| !! | GATTTTGTTGTGAAGAACTT+GGG | + | chr2_1:62999698-62999717 | Msa0216810:intron | 30.0% |
| TTAAATAGATCCTCAATTCC+AGG | - | chr2_1:63000024-63000043 | None:intergenic | 30.0% | |
| GTATGAATCAATGCTTCAAT+AGG | + | chr2_1:63000129-63000148 | Msa0216810:intron | 30.0% | |
| TGTTGTTGATGCATTGAAAA+TGG | - | chr2_1:63000269-63000288 | None:intergenic | 30.0% | |
| ! | CAATTTTGGACAGAAACATT+GGG | - | chr2_1:63000392-63000411 | None:intergenic | 30.0% |
| TTTCACATGCCAAAACAAAT+GGG | + | chr2_1:63000779-63000798 | Msa0216810:intron | 30.0% | |
| ! | TAGTAGTGTAAGACATTTTC+TGG | - | chr2_1:63001074-63001093 | None:intergenic | 30.0% |
| ! | ATTTTTCCTCCTTAACACAA+GGG | + | chr2_1:63001344-63001363 | Msa0216810:CDS | 30.0% |
| GATGTTTGCAAAACAATGAT+TGG | + | chr2_1:63001366-63001385 | Msa0216810:exon | 30.0% | |
| !! | AATGATTGGTTTGTTGAACA+AGG | + | chr2_1:63001380-63001399 | Msa0216810:exon | 30.0% |
| !!! | TCTTTTTTCGATTTTTCCCT+TGG | + | chr2_1:63001457-63001476 | Msa0216810:three_prime_UTR | 30.0% |
| !! | AACTGAATTAGCTCTACAAA+TGG | - | chr2_1:63001503-63001522 | None:intergenic | 30.0% |
| TGATTTCTTCATTCATCAGA+AGG | + | chr2_1:63001544-63001563 | Msa0216810:three_prime_UTR | 30.0% | |
| ATCAGATAAAAGAGATGCAA+AGG | - | chr2_1:63001618-63001637 | None:intergenic | 30.0% | |
| TATTTCCATAAAGAGACGAG+AGG | + | chr2_1:62995978-62995997 | Msa0216810:five_prime_UTR | 35.0% | |
| ATTTCCATAAAGAGACGAGA+GGG | + | chr2_1:62995979-62995998 | Msa0216810:five_prime_UTR | 35.0% | |
| !! | TCAAAAGACCATTTTGACCT+TGG | + | chr2_1:62996011-62996030 | Msa0216810:five_prime_UTR | 35.0% |
| AAGAAGATCCAAGGTCAAAA+TGG | - | chr2_1:62996022-62996041 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGAAGATCCA+AGG | - | chr2_1:62996031-62996050 | None:intergenic | 35.0% | |
| AGAAAACGAAAGCTTGAGAA+AGG | - | chr2_1:62996054-62996073 | None:intergenic | 35.0% | |
| AGAAGAAACCTTCTTGTGTT+TGG | - | chr2_1:62996152-62996171 | None:intergenic | 35.0% | |
| !! | TTGGTAGGTTGATTGATCTA+TGG | + | chr2_1:62996332-62996351 | Msa0216810:intron | 35.0% |
| CTATGGTGTTTCACTTTGTT+CGG | + | chr2_1:62996349-62996368 | Msa0216810:intron | 35.0% | |
| ! | TTCCCATATTTCCTTTTTGG+GGG | + | chr2_1:62996723-62996742 | Msa0216810:intron | 35.0% |
| AACCCCCAAAAAGGAAATAT+GGG | - | chr2_1:62996728-62996747 | None:intergenic | 35.0% | |
| AAACCCCCAAAAAGGAAATA+TGG | - | chr2_1:62996729-62996748 | None:intergenic | 35.0% | |
| ACTTATAAACCTCACGAGTT+AGG | - | chr2_1:62996858-62996877 | None:intergenic | 35.0% | |
| !! | ATTCTAAACCGTTTTTCCCA+AGG | + | chr2_1:62996933-62996952 | Msa0216810:intron | 35.0% |
| AGAAAGGAAAAAACATTGCG+AGG | + | chr2_1:62997060-62997079 | Msa0216810:intron | 35.0% | |
| ACTGAATCCATCTTCATGTA+GGG | - | chr2_1:62997181-62997200 | None:intergenic | 35.0% | |
| AACTGAATCCATCTTCATGT+AGG | - | chr2_1:62997182-62997201 | None:intergenic | 35.0% | |
| ! | TTTAGGATTTGCCACATCTT+CGG | + | chr2_1:62997351-62997370 | Msa0216810:intron | 35.0% |
| TCTTAAACTACCAGAGAATC+GGG | + | chr2_1:62997440-62997459 | Msa0216810:CDS | 35.0% | |
| ATGTATTTGTCTGGATCTGA+AGG | + | chr2_1:62997487-62997506 | Msa0216810:intron | 35.0% | |
| TGTATTTGTCTGGATCTGAA+GGG | + | chr2_1:62997488-62997507 | Msa0216810:intron | 35.0% | |
| TTTATTGCTGACATGAGATC+CGG | - | chr2_1:62997521-62997540 | None:intergenic | 35.0% | |
| CCTGGAAATGAAAAACACAA+AGG | - | chr2_1:62997586-62997605 | None:intergenic | 35.0% | |
| ! | CCTTTGTGTTTTTCATTTCC+AGG | + | chr2_1:62997583-62997602 | Msa0216810:intron | 35.0% |
| TTTATATGCATGCAGTGTTC+AGG | + | chr2_1:62997700-62997719 | Msa0216810:CDS | 35.0% | |
| TTCAGGAATACATCGAAGTT+TGG | + | chr2_1:62997717-62997736 | Msa0216810:CDS | 35.0% | |
| TCAGGAATACATCGAAGTTT+GGG | + | chr2_1:62997718-62997737 | Msa0216810:CDS | 35.0% | |
| ! | TTTGGGGGTACATATATCAA+AGG | + | chr2_1:62997735-62997754 | Msa0216810:CDS | 35.0% |
| TATGCTGATGTTTATGTGCT+CGG | + | chr2_1:62997966-62997985 | Msa0216810:intron | 35.0% | |
| ! | TTGTATTTTCCAACTAGGTG+GGG | - | chr2_1:62998230-62998249 | None:intergenic | 35.0% |
| ! | GTTGTATTTTCCAACTAGGT+GGG | - | chr2_1:62998231-62998250 | None:intergenic | 35.0% |
| ! | TGTTGTATTTTCCAACTAGG+TGG | - | chr2_1:62998232-62998251 | None:intergenic | 35.0% |
| ! | CACTGTTGTATTTTCCAACT+AGG | - | chr2_1:62998235-62998254 | None:intergenic | 35.0% |
| CTTTAACTCTGATGAGTACT+AGG | + | chr2_1:62998396-62998415 | Msa0216810:intron | 35.0% | |
| ACTTTGCCGACAAAAAGTTA+TGG | - | chr2_1:62998431-62998450 | None:intergenic | 35.0% | |
| !! | GTACTGACTTAATTTGACGT+GGG | + | chr2_1:62998498-62998517 | Msa0216810:intron | 35.0% |
| GAAGGAAAGACAAAAGTCAT+TGG | - | chr2_1:62998595-62998614 | None:intergenic | 35.0% | |
| ! | TTCAATGTAAGTGAGTTGAG+TGG | + | chr2_1:62998696-62998715 | Msa0216810:intron | 35.0% |
| !!! | GTTTTGGTTCTATTCAGCAA+TGG | + | chr2_1:62998801-62998820 | Msa0216810:CDS | 35.0% |
| ! | AAAGGTATGAAGACAAGAGA+TGG | + | chr2_1:62999017-62999036 | Msa0216810:intron | 35.0% |
| AAGGTATGAAGACAAGAGAT+GGG | + | chr2_1:62999018-62999037 | Msa0216810:intron | 35.0% | |
| !! | AAAAGTATTCTCAGCAACAG+TGG | - | chr2_1:62999143-62999162 | None:intergenic | 35.0% |
| AGAATATCAATTACCTGCTC+CGG | - | chr2_1:62999241-62999260 | None:intergenic | 35.0% | |
| TCTGTAGCATAGTCTACTTT+GGG | - | chr2_1:62999477-62999496 | None:intergenic | 35.0% | |
| CCATAGACAACATGTTGAAA+AGG | - | chr2_1:62999500-62999519 | None:intergenic | 35.0% | |
| ! | CCTTTTCAACATGTTGTCTA+TGG | + | chr2_1:62999497-62999516 | Msa0216810:CDS | 35.0% |
| CTACTGCTGATGATATTAAC+TGG | + | chr2_1:62999556-62999575 | Msa0216810:CDS | 35.0% | |
| AACGTATTCTCAAAGCAAAC+AGG | - | chr2_1:62999724-62999743 | None:intergenic | 35.0% | |
| AAATGTACGGAATATTGTGC+AGG | + | chr2_1:62999760-62999779 | Msa0216810:intron | 35.0% | |
| ! | TTCTTAGTAAACGGACTCTA+AGG | + | chr2_1:62999898-62999917 | Msa0216810:intron | 35.0% |
| ! | GGTTTTACTGGAGTTAAACT+TGG | - | chr2_1:63000066-63000085 | None:intergenic | 35.0% |
| !! | ACATCTTTCTGTGGTTTTAC+TGG | - | chr2_1:63000078-63000097 | None:intergenic | 35.0% |
| ! | TATAATGAGCCTCTTTGAGA+AGG | + | chr2_1:63000107-63000126 | Msa0216810:CDS | 35.0% |
| TGATTCATACCTTCTCAAAG+AGG | - | chr2_1:63000119-63000138 | None:intergenic | 35.0% | |
| ! | CCAATTTTGGACAGAAACAT+TGG | - | chr2_1:63000393-63000412 | None:intergenic | 35.0% |
| ! | CCAATGTTTCTGTCCAAAAT+TGG | + | chr2_1:63000390-63000409 | Msa0216810:CDS | 35.0% |
| TACCCAATGTGACATTAAGT+CGG | - | chr2_1:63000667-63000686 | None:intergenic | 35.0% | |
| ATAGAATTCAGAGTAACCCT+CGG | + | chr2_1:63000732-63000751 | Msa0216810:intron | 35.0% | |
| GTTTCACATGCCAAAACAAA+TGG | + | chr2_1:63000778-63000797 | Msa0216810:intron | 35.0% | |
| ! | CAAGTAACTCCCATTTGTTT+TGG | - | chr2_1:63000791-63000810 | None:intergenic | 35.0% |
| CCATAATCTGCTAAACTAGT+GGG | - | chr2_1:63001027-63001046 | None:intergenic | 35.0% | |
| TCCATAATCTGCTAAACTAG+TGG | - | chr2_1:63001028-63001047 | None:intergenic | 35.0% | |
| ! | TAGTGTAAGACATTTTCTGG+TGG | - | chr2_1:63001071-63001090 | None:intergenic | 35.0% |
| TGCAATAGATTAGATGTGGA+AGG | - | chr2_1:63001151-63001170 | None:intergenic | 35.0% | |
| GTTTAACACAGACATCAAGA+TGG | - | chr2_1:63001192-63001211 | None:intergenic | 35.0% | |
| ! | TCCATTTGTTGCAGTTTCTA+TGG | + | chr2_1:63001217-63001236 | Msa0216810:intron | 35.0% |
| ACCATAGAAACTGCAACAAA+TGG | - | chr2_1:63001221-63001240 | None:intergenic | 35.0% | |
| TGTTGCAGTTTCTATGGTAT+AGG | + | chr2_1:63001223-63001242 | Msa0216810:intron | 35.0% | |
| GTTGCAGTTTCTATGGTATA+GGG | + | chr2_1:63001224-63001243 | Msa0216810:intron | 35.0% | |
| ! | GATTTTTCCTCCTTAACACA+AGG | + | chr2_1:63001343-63001362 | Msa0216810:CDS | 35.0% |
| ! | AGTTTTCACCTCTTTTGTCT+TGG | + | chr2_1:63001519-63001538 | Msa0216810:three_prime_UTR | 35.0% |
| ! | GTTTTCACCTCTTTTGTCTT+GGG | + | chr2_1:63001520-63001539 | Msa0216810:three_prime_UTR | 35.0% |
| ! | TTTTCACCTCTTTTGTCTTG+GGG | + | chr2_1:63001521-63001540 | Msa0216810:three_prime_UTR | 35.0% |
| GATAAAAGAGATGCAAAGGA+AGG | - | chr2_1:63001614-63001633 | None:intergenic | 35.0% | |
| TTTCCATAAAGAGACGAGAG+GGG | + | chr2_1:62995980-62995999 | Msa0216810:five_prime_UTR | 40.0% | |
| TGATTGCTTCAGGAACGAAT+CGG | - | chr2_1:62996090-62996109 | None:intergenic | 40.0% | |
| !! | GTTAAGCTCTTTGGTAACGT+TGG | - | chr2_1:62996128-62996147 | None:intergenic | 40.0% |
| GCATCATGAAGTGGTTTGAT+TGG | + | chr2_1:62996567-62996586 | Msa0216810:intron | 40.0% | |
| TTCAGCGTTATTTGGATGCT+CGG | + | chr2_1:62996749-62996768 | Msa0216810:intron | 40.0% | |
| ATGTTATGAGTCCACCTTCA+AGG | + | chr2_1:62996826-62996845 | Msa0216810:intron | 40.0% | |
| TGTTATGAGTCCACCTTCAA+GGG | + | chr2_1:62996827-62996846 | Msa0216810:intron | 40.0% | |
| CTCGTGAGGTTTATAAGTCA+TGG | + | chr2_1:62996860-62996879 | Msa0216810:intron | 40.0% | |
| !! | CATGGATTAGTCATTTGGGA+TGG | + | chr2_1:62996878-62996897 | Msa0216810:intron | 40.0% |
| ! | CTAAATGGCCTTGGGAAAAA+CGG | - | chr2_1:62996944-62996963 | None:intergenic | 40.0% |
| ACAAGCAACTAAATGGCCTT+GGG | - | chr2_1:62996952-62996971 | None:intergenic | 40.0% | |
| AACAAGCAACTAAATGGCCT+TGG | - | chr2_1:62996953-62996972 | None:intergenic | 40.0% | |
| ATCAATCCCTTCAGCCATAA+CGG | - | chr2_1:62997015-62997034 | None:intergenic | 40.0% | |
| ! | TGGTTTTCCCTACATGAAGA+TGG | + | chr2_1:62997171-62997190 | Msa0216810:intron | 40.0% |
| CAGTTTAATTGGTTGCGAAC+AGG | + | chr2_1:62997197-62997216 | Msa0216810:intron | 40.0% | |
| GTATTTGTCTGGATCTGAAG+GGG | + | chr2_1:62997489-62997508 | Msa0216810:intron | 40.0% | |
| AGATTTACACTTGCCCATCT+CGG | - | chr2_1:62997673-62997692 | None:intergenic | 40.0% | |
| AGATGGGCAAGTGTAAATCT+TGG | + | chr2_1:62997673-62997692 | Msa0216810:CDS | 40.0% | |
| CAGGAATACATCGAAGTTTG+GGG | + | chr2_1:62997719-62997738 | Msa0216810:CDS | 40.0% | |
| AGGAATACATCGAAGTTTGG+GGG | + | chr2_1:62997720-62997739 | Msa0216810:CDS | 40.0% | |
| ! | ATATCAGTAGTGGAGACTCT+TGG | + | chr2_1:62997809-62997828 | Msa0216810:intron | 40.0% |
| ! | TATCAGTAGTGGAGACTCTT+GGG | + | chr2_1:62997810-62997829 | Msa0216810:intron | 40.0% |
| ! | GCTGCACCATAACTTTTTGT+CGG | + | chr2_1:62998422-62998441 | Msa0216810:intron | 40.0% |
| !! | GTCGGCAAAGTTTTTCAATG+TGG | + | chr2_1:62998440-62998459 | Msa0216810:intron | 40.0% |
| !! | GGTACTGACTTAATTTGACG+TGG | + | chr2_1:62998497-62998516 | Msa0216810:intron | 40.0% |
| ! | TGAATGAATGCAACTTGCTC+TGG | - | chr2_1:62998680-62998699 | None:intergenic | 40.0% |
| !! | TGGTCGTGTTCTTGTTATTG+TGG | + | chr2_1:62998716-62998735 | Msa0216810:intron | 40.0% |
| ACGAGAAAGCAAATAGCTAC+TGG | + | chr2_1:62998827-62998846 | Msa0216810:CDS | 40.0% | |
| CGAGAAAGCAAATAGCTACT+GGG | + | chr2_1:62998828-62998847 | Msa0216810:CDS | 40.0% | |
| AGTCCAACTCTATCGTAATG+TGG | - | chr2_1:62998868-62998887 | None:intergenic | 40.0% | |
| ! | AAGACAAGAGATGGGTTTCA+AGG | + | chr2_1:62999026-62999045 | Msa0216810:CDS | 40.0% |
| ! | AGACAAGAGATGGGTTTCAA+GGG | + | chr2_1:62999027-62999046 | Msa0216810:CDS | 40.0% |
| !! | AAGTTTCAGCTTGTTGTTGC+GGG | - | chr2_1:62999419-62999438 | None:intergenic | 40.0% |
| !! | GAAGTTTCAGCTTGTTGTTG+CGG | - | chr2_1:62999420-62999439 | None:intergenic | 40.0% |
| ACAAGCTGAAACTTCAAAGC+CGG | + | chr2_1:62999425-62999444 | Msa0216810:CDS | 40.0% | |
| ! | TAGCATAGTCTACTTTGGGA+GGG | - | chr2_1:62999473-62999492 | None:intergenic | 40.0% |
| GTCTGTAGCATAGTCTACTT+TGG | - | chr2_1:62999478-62999497 | None:intergenic | 40.0% | |
| ! | TGTTTCTGTCCAAAATTGGC+CGG | + | chr2_1:63000394-63000413 | Msa0216810:CDS | 40.0% |
| AGAGTTGCAGAATCATATGC+AGG | + | chr2_1:63000463-63000482 | Msa0216810:CDS | 40.0% | |
| ACATAAGTTAGTTGCTGGAC+TGG | - | chr2_1:63000540-63000559 | None:intergenic | 40.0% | |
| GCAAGACATAAGTTAGTTGC+TGG | - | chr2_1:63000545-63000564 | None:intergenic | 40.0% | |
| TAACTTATGTCTTGCCTCTC+TGG | + | chr2_1:63000550-63000569 | Msa0216810:intron | 40.0% | |
| TATTGAACAGAGTTTCCTGC+CGG | - | chr2_1:63000605-63000624 | None:intergenic | 40.0% | |
| TCTGTTCAATATCCACCATC+TGG | + | chr2_1:63000614-63000633 | Msa0216810:CDS | 40.0% | |
| CTGTTCAATATCCACCATCT+GGG | + | chr2_1:63000615-63000634 | Msa0216810:CDS | 40.0% | |
| TAACTAGTGACATACCCAGA+TGG | - | chr2_1:63000632-63000651 | None:intergenic | 40.0% | |
| ! | AAGCCGACTTAATGTCACAT+TGG | + | chr2_1:63000661-63000680 | Msa0216810:intron | 40.0% |
| ! | AGCCGACTTAATGTCACATT+GGG | + | chr2_1:63000662-63000681 | Msa0216810:intron | 40.0% |
| TGTCACATTGGGTAGCTTAT+TGG | + | chr2_1:63000673-63000692 | Msa0216810:intron | 40.0% | |
| GTCACATTGGGTAGCTTATT+GGG | + | chr2_1:63000674-63000693 | Msa0216810:intron | 40.0% | |
| ATGGAGCAAATGACAATAGC+AGG | - | chr2_1:63000714-63000733 | None:intergenic | 40.0% | |
| GAGGGTTACTCTGAATTCTA+TGG | - | chr2_1:63000733-63000752 | None:intergenic | 40.0% | |
| ! | TCGTACCACAAGACTACTTT+TGG | + | chr2_1:63000818-63000837 | Msa0216810:intron | 40.0% |
| !! | CGTACCACAAGACTACTTTT+GGG | + | chr2_1:63000819-63000838 | Msa0216810:intron | 40.0% |
| !! | GTACCACAAGACTACTTTTG+GGG | + | chr2_1:63000820-63000839 | Msa0216810:intron | 40.0% |
| !! | TACCACAAGACTACTTTTGG+GGG | + | chr2_1:63000821-63000840 | Msa0216810:intron | 40.0% |
| ! | CCCACTAGTTTAGCAGATTA+TGG | + | chr2_1:63001024-63001043 | Msa0216810:intron | 40.0% |
| !! | AGACATTTTCTGGTGGTTTG+TGG | - | chr2_1:63001064-63001083 | None:intergenic | 40.0% |
| AACACAGACATCAAGATGGA+AGG | - | chr2_1:63001188-63001207 | None:intergenic | 40.0% | |
| TTCTATGGTATAGGGCAAGT+TGG | + | chr2_1:63001232-63001251 | Msa0216810:CDS | 40.0% | |
| ACTGTCATCATACCATTGAC+TGG | - | chr2_1:63001259-63001278 | None:intergenic | 40.0% | |
| AGTCAATGGTATGATGACAG+TGG | + | chr2_1:63001258-63001277 | Msa0216810:CDS | 40.0% | |
| GTCAATGGTATGATGACAGT+GGG | + | chr2_1:63001259-63001278 | Msa0216810:CDS | 40.0% | |
| AAACATCCCTTGTGTTAAGG+AGG | - | chr2_1:63001353-63001372 | None:intergenic | 40.0% | |
| TGCAAACATCCCTTGTGTTA+AGG | - | chr2_1:63001356-63001375 | None:intergenic | 40.0% | |
| !! | ATTGGTTTGTTGAACAAGGC+TGG | + | chr2_1:63001384-63001403 | Msa0216810:exon | 40.0% |
| ACAAATGGTTTACAGACCCA+CGG | - | chr2_1:63001488-63001507 | None:intergenic | 40.0% | |
| AAATCACCCCAAGACAAAAG+AGG | - | chr2_1:63001530-63001549 | None:intergenic | 40.0% | |
| TTTCCCCTCTCGTCTCTTTA+TGG | - | chr2_1:62995986-62996005 | None:intergenic | 45.0% | |
| CTTCAGGAACGAATCGGAAA+GGG | - | chr2_1:62996084-62996103 | None:intergenic | 45.0% | |
| CCTGAAGCAATCACCATGAA+CGG | + | chr2_1:62996097-62996116 | Msa0216810:exon | 45.0% | |
| AGCAATCACCATGAACGGAA+AGG | + | chr2_1:62996102-62996121 | Msa0216810:exon | 45.0% | |
| GTGTTTGGCGTTAAGCTCTT+TGG | - | chr2_1:62996137-62996156 | None:intergenic | 45.0% | |
| GCTTAACGCCAAACACAAGA+AGG | + | chr2_1:62996141-62996160 | Msa0216810:CDS | 45.0% | |
| CACTGTCGATCAAGCATAAC+TGG | - | chr2_1:62996442-62996461 | None:intergenic | 45.0% | |
| ACGCTGAAAAACCCCCAAAA+AGG | - | chr2_1:62996737-62996756 | None:intergenic | 45.0% | |
| !! | GGGGGTTTTTCAGCGTTATT+TGG | + | chr2_1:62996741-62996760 | Msa0216810:intron | 45.0% |
| !! | TGGTGTTATGAGCATAAGCC+TGG | - | chr2_1:62996909-62996928 | None:intergenic | 45.0% |
| ! | AAGGAGGACTTGTTCCGTTA+TGG | + | chr2_1:62996998-62997017 | Msa0216810:intron | 45.0% |
| ACTTGTTCCGTTATGGCTGA+AGG | + | chr2_1:62997005-62997024 | Msa0216810:intron | 45.0% | |
| CTTGTTCCGTTATGGCTGAA+GGG | + | chr2_1:62997006-62997025 | Msa0216810:intron | 45.0% | |
| ! | GCTGAAGGGATTGATTTCAG+AGG | + | chr2_1:62997020-62997039 | Msa0216810:intron | 45.0% |
| TCTTCGGTTTCCCTTCTCTT+CGG | + | chr2_1:62997367-62997386 | Msa0216810:intron | 45.0% | |
| AAGACGTAAGCCGAAGAGAA+GGG | - | chr2_1:62997380-62997399 | None:intergenic | 45.0% | |
| AAAGACGTAAGCCGAAGAGA+AGG | - | chr2_1:62997381-62997400 | None:intergenic | 45.0% | |
| TGCTATGTTCCATTAGCCCT+TGG | + | chr2_1:62997761-62997780 | Msa0216810:CDS | 45.0% | |
| TGACAGACATTCCAGACCAA+GGG | - | chr2_1:62997780-62997799 | None:intergenic | 45.0% | |
| ATGACAGACATTCCAGACCA+AGG | - | chr2_1:62997781-62997800 | None:intergenic | 45.0% | |
| ATTAGCAAACCCCACCTAGT+TGG | + | chr2_1:62998218-62998237 | Msa0216810:intron | 45.0% | |
| GTGAACTGCATAAACACTGC+CGG | - | chr2_1:62998377-62998396 | None:intergenic | 45.0% | |
| AACTCTGATGAGTACTAGGC+TGG | + | chr2_1:62998400-62998419 | Msa0216810:intron | 45.0% | |
| ACGTGGGAATTGCTGAAGTA+TGG | + | chr2_1:62998514-62998533 | Msa0216810:intron | 45.0% | |
| GGCTCCTAAGTCCAAAATGT+TGG | + | chr2_1:62998535-62998554 | Msa0216810:intron | 45.0% | |
| GTTCTGCAACTCTTGACACT+TGG | + | chr2_1:62998651-62998670 | Msa0216810:CDS | 45.0% | |
| CCAACTCTATCGTAATGTGG+AGG | - | chr2_1:62998865-62998884 | None:intergenic | 45.0% | |
| CCTCCACATTACGATAGAGT+TGG | + | chr2_1:62998862-62998881 | Msa0216810:CDS | 45.0% | |
| AATCAGGTGCAGAAAGCAAG+AGG | - | chr2_1:62998978-62998997 | None:intergenic | 45.0% | |
| ! | AAGAGATGGGTTTCAAGGGA+TGG | + | chr2_1:62999031-62999050 | Msa0216810:CDS | 45.0% |
| ! | AGAGATGGGTTTCAAGGGAT+GGG | + | chr2_1:62999032-62999051 | Msa0216810:CDS | 45.0% |
| GGGAATCCAAAAACACCTTC+TGG | + | chr2_1:62999052-62999071 | Msa0216810:CDS | 45.0% | |
| TTATCTTCACGCAGTCCAGA+AGG | - | chr2_1:62999070-62999089 | None:intergenic | 45.0% | |
| AATCTCCTTCACATCAGCAG+AGG | + | chr2_1:62999089-62999108 | Msa0216810:CDS | 45.0% | |
| ! | CCATGTCCACTATTTTCTGC+AGG | - | chr2_1:62999115-62999134 | None:intergenic | 45.0% |
| !! | CCTGCAGAAAATAGTGGACA+TGG | + | chr2_1:62999112-62999131 | Msa0216810:CDS | 45.0% |
| ! | CAGGAACTGCATTTGATGGT+TGG | - | chr2_1:62999183-62999202 | None:intergenic | 45.0% |
| GTAGCAGGAACTGCATTTGA+TGG | - | chr2_1:62999187-62999206 | None:intergenic | 45.0% | |
| AGTTCCTGCTACAAGACGTA+GGG | + | chr2_1:62999195-62999214 | Msa0216810:CDS | 45.0% | |
| TTTCTCAGTGTGCTGAGGTT+GGG | - | chr2_1:62999382-62999401 | None:intergenic | 45.0% | |
| TCAACTTTCTCAGTGTGCTG+AGG | - | chr2_1:62999387-62999406 | None:intergenic | 45.0% | |
| !! | AGTTTCAGCTTGTTGTTGCG+GGG | - | chr2_1:62999418-62999437 | None:intergenic | 45.0% |
| ! | AGCATAGTCTACTTTGGGAG+GGG | - | chr2_1:62999472-62999491 | None:intergenic | 45.0% |
| GTAGCATAGTCTACTTTGGG+AGG | - | chr2_1:62999474-62999493 | None:intergenic | 45.0% | |
| GCTGATGATATTAACTGGGC+AGG | + | chr2_1:62999561-62999580 | Msa0216810:CDS | 45.0% | |
| ATTTGTTTCAGCTGCTGCAG+AGG | + | chr2_1:62999939-62999958 | Msa0216810:intron | 45.0% | |
| TACTCTCAACTGCGTTTGGT+GGG | - | chr2_1:62999987-63000006 | None:intergenic | 45.0% | |
| AGGATACTTGAGATCCACAC+CGG | - | chr2_1:63000348-63000367 | None:intergenic | 45.0% | |
| TGGACAGAAACATTGGGACT+CGG | - | chr2_1:63000386-63000405 | None:intergenic | 45.0% | |
| AACTCTCCCTGAACACCAAT+GGG | - | chr2_1:63000449-63000468 | None:intergenic | 45.0% | |
| !! | ATATGCTGGTGTCATGTTCC+TGG | - | chr2_1:63000582-63000601 | None:intergenic | 45.0% |
| GAACATGACACCAGCATATC+CGG | + | chr2_1:63000583-63000602 | Msa0216810:CDS | 45.0% | |
| TTAGCACCAATATCAGCCGA+GGG | - | chr2_1:63000751-63000770 | None:intergenic | 45.0% | |
| ATTAGCACCAATATCAGCCG+AGG | - | chr2_1:63000752-63000771 | None:intergenic | 45.0% | |
| ! | ATCCCCCAAAAGTAGTCTTG+TGG | - | chr2_1:63000826-63000845 | None:intergenic | 45.0% |
| AACCACTTCCAAGTCAGCAA+AGG | + | chr2_1:63001315-63001334 | Msa0216810:CDS | 45.0% | |
| ! | ATCGTACTCCTTTGCTGACT+TGG | - | chr2_1:63001326-63001345 | None:intergenic | 45.0% |
| GCTTCAGGAACGAATCGGAA+AGG | - | chr2_1:62996085-62996104 | None:intergenic | 50.0% | |
| CCGTTCATGGTGATTGCTTC+AGG | - | chr2_1:62996100-62996119 | None:intergenic | 50.0% | |
| !! | AACGTTGGCCTTTCCGTTCA+TGG | - | chr2_1:62996113-62996132 | None:intergenic | 50.0% |
| TTAGGTGAGACCCTTGAAGG+TGG | - | chr2_1:62996840-62996859 | None:intergenic | 50.0% | |
| GAGTTAGGTGAGACCCTTGA+AGG | - | chr2_1:62996843-62996862 | None:intergenic | 50.0% | |
| ! | TCATTTGGGATGGACTCTCC+AGG | + | chr2_1:62996888-62996907 | Msa0216810:intron | 50.0% |
| GAGAAGGGAAACCGAAGATG+TGG | - | chr2_1:62997365-62997384 | None:intergenic | 50.0% | |
| TCAGCACATTCCCGATTCTC+TGG | - | chr2_1:62997453-62997472 | None:intergenic | 50.0% | |
| TGCTGACATGAGATCCGGAT+AGG | - | chr2_1:62997516-62997535 | None:intergenic | 50.0% | |
| TACTATGCAGAGCTCCGAGA+TGG | + | chr2_1:62997656-62997675 | Msa0216810:intron | 50.0% | |
| ACTATGCAGAGCTCCGAGAT+GGG | + | chr2_1:62997657-62997676 | Msa0216810:intron | 50.0% | |
| TGTTCCATTAGCCCTTGGTC+TGG | + | chr2_1:62997766-62997785 | Msa0216810:CDS | 50.0% | |
| CATTCCAGACCAAGGGCTAA+TGG | - | chr2_1:62997773-62997792 | None:intergenic | 50.0% | |
| !! | TTACTGCGAATCACCGACTC+CGG | + | chr2_1:62998355-62998374 | Msa0216810:intron | 50.0% |
| TGCATAAACACTGCCGGAGT+CGG | - | chr2_1:62998371-62998390 | None:intergenic | 50.0% | |
| !!! | CGCAGTCCAGAAGGTGTTTT+TGG | - | chr2_1:62999061-62999080 | None:intergenic | 50.0% |
| CAGAGGCCTGCAGAAAATAG+TGG | + | chr2_1:62999106-62999125 | Msa0216810:CDS | 50.0% | |
| CAGTTCCTGCTACAAGACGT+AGG | + | chr2_1:62999194-62999213 | Msa0216810:CDS | 50.0% | |
| CTTTCTCAGTGTGCTGAGGT+TGG | - | chr2_1:62999383-62999402 | None:intergenic | 50.0% | |
| !! | AGGGGTACTTTGAGCTGTGT+CGG | - | chr2_1:62999454-62999473 | None:intergenic | 50.0% |
| GAAAATCGCTCCAAAGCAGC+TGG | + | chr2_1:62999531-62999550 | Msa0216810:CDS | 50.0% | |
| GTACTCTCAACTGCGTTTGG+TGG | - | chr2_1:62999988-63000007 | None:intergenic | 50.0% | |
| ! | GGAGTACTCTCAACTGCGTT+TGG | - | chr2_1:62999991-63000010 | None:intergenic | 50.0% |
| TCAATTCCAGGTGCAGACAG+AGG | - | chr2_1:63000012-63000031 | None:intergenic | 50.0% | |
| TCTGTCTGCACCTGGAATTG+AGG | + | chr2_1:63000011-63000030 | Msa0216810:CDS | 50.0% | |
| ACAGCAGCAGTCTCTTCTGA+TGG | + | chr2_1:63000304-63000323 | Msa0216810:CDS | 50.0% | |
| GCTGCTGCAGCTAAATCTAC+CGG | + | chr2_1:63000326-63000345 | Msa0216810:CDS | 50.0% | |
| TGCAGCTAAATCTACCGGTG+TGG | + | chr2_1:63000331-63000350 | Msa0216810:CDS | 50.0% | |
| ! | ATCCAGTAGCCGGCCAATTT+TGG | - | chr2_1:63000406-63000425 | None:intergenic | 50.0% |
| GATATCGGGAATCCAGTAGC+CGG | - | chr2_1:63000416-63000435 | None:intergenic | 50.0% | |
| GCTACTGGATTCCCGATATC+TGG | + | chr2_1:63000416-63000435 | Msa0216810:CDS | 50.0% | |
| ATGGGCGCTACTCCAGATAT+CGG | - | chr2_1:63000431-63000450 | None:intergenic | 50.0% | |
| ! | ATATCTGGAGTAGCGCCCAT+TGG | + | chr2_1:63000431-63000450 | Msa0216810:CDS | 50.0% |
| CAACTCTCCCTGAACACCAA+TGG | - | chr2_1:63000450-63000469 | None:intergenic | 50.0% | |
| CTAGTGACATACCCAGATGG+TGG | - | chr2_1:63000629-63000648 | None:intergenic | 50.0% | |
| GAGTAACCCTCGGCTGATAT+TGG | + | chr2_1:63000742-63000761 | Msa0216810:intron | 50.0% | |
| !! | CTCCTTTGCTGACTTGGAAG+TGG | - | chr2_1:63001320-63001339 | None:intergenic | 50.0% |
| ! | TTTTTCCCTTGGCCAATCCG+TGG | + | chr2_1:63001468-63001487 | Msa0216810:three_prime_UTR | 50.0% |
| ! | TTTTCCCTTGGCCAATCCGT+GGG | + | chr2_1:63001469-63001488 | Msa0216810:three_prime_UTR | 50.0% |
| TGGTTTACAGACCCACGGAT+TGG | - | chr2_1:63001483-63001502 | None:intergenic | 50.0% | |
| AGGGTCTCACCTAACTCGTG+AGG | + | chr2_1:62996846-62996865 | Msa0216810:intron | 55.0% | |
| GGATCTGAAGGGGTCCTATC+CGG | + | chr2_1:62997499-62997518 | Msa0216810:intron | 55.0% | |
| GGAACCCTACGTCTTGTAGC+AGG | - | chr2_1:62999202-62999221 | None:intergenic | 55.0% | |
| ! | CTTTGAGCTGTGTCGGTAGC+CGG | - | chr2_1:62999447-62999466 | None:intergenic | 55.0% |
| AGCAGTAGCACCAGCTGCTT+TGG | - | chr2_1:62999544-62999563 | None:intergenic | 55.0% | |
| ! | GTTTGGTGGGCCAGTCTTCT+CGG | - | chr2_1:62999974-62999993 | None:intergenic | 55.0% |
| AGTACTCCTCTGTCTGCACC+TGG | + | chr2_1:63000003-63000022 | Msa0216810:CDS | 55.0% | |
| AGACTGCTGCTGTGCTAGCA+TGG | - | chr2_1:63000297-63000316 | None:intergenic | 55.0% | |
| CTCGGCTGTTGCATGCTTGT+AGG | - | chr2_1:63000368-63000387 | None:intergenic | 55.0% | |
| GTCCAAAATTGGCCGGCTAC+TGG | + | chr2_1:63000401-63000420 | Msa0216810:CDS | 55.0% | |
| TGGGCGCTACTCCAGATATC+GGG | - | chr2_1:63000430-63000449 | None:intergenic | 55.0% | |
| ! | AGTAGCGCCCATTGGTGTTC+AGG | + | chr2_1:63000439-63000458 | Msa0216810:CDS | 55.0% |
| ! | GTAGCGCCCATTGGTGTTCA+GGG | + | chr2_1:63000440-63000459 | Msa0216810:CDS | 55.0% |
| TTGCCTCTCTGGATCAGACC+AGG | + | chr2_1:63000561-63000580 | Msa0216810:intron | 55.0% | |
| GTTCCTGGTCTGATCCAGAG+AGG | - | chr2_1:63000567-63000586 | None:intergenic | 55.0% | |
| ATGACACCAGCATATCCGGC+AGG | + | chr2_1:63000587-63000606 | Msa0216810:CDS | 55.0% | |
| GAGTTTCCTGCCGGATATGC+TGG | - | chr2_1:63000596-63000615 | None:intergenic | 55.0% | |
| GAGCACATGTGCGTGTGTGT+GGG | - | chr2_1:63000958-63000977 | None:intergenic | 55.0% | |
| TGAGCACATGTGCGTGTGTG+TGG | - | chr2_1:63000959-63000978 | None:intergenic | 55.0% | |
| !! | GGGCAAGTTGGTCCAGTCAA+TGG | + | chr2_1:63001244-63001263 | Msa0216810:CDS | 55.0% |
| TTGGAAGTGGTTGACGTCGC+TGG | - | chr2_1:63001307-63001326 | None:intergenic | 55.0% | |
| ! | TTGCTGAGCTGTGCTGCTGC+AGG | + | chr2_1:62998291-62998310 | Msa0216810:intron | 60.0% |
| GCAGGCCTCTGCTGATGTGA+AGG | - | chr2_1:62999097-62999116 | None:intergenic | 60.0% | |
| TAGGGTTCCAGCTCCTCGCA+AGG | + | chr2_1:62999213-62999232 | Msa0216810:CDS | 60.0% | |
| TCCAGCTCCTCGCAAGGTAC+CGG | + | chr2_1:62999219-62999238 | Msa0216810:CDS | 60.0% | |
| GTGTGCTGAGGTTGGGTAGC+AGG | - | chr2_1:62999375-62999394 | None:intergenic | 60.0% | |
| !! | GCTTGTTGTTGCGGGGCTAC+TGG | - | chr2_1:62999411-62999430 | None:intergenic | 60.0% |
| GTGTCAGCAGCCGAGAAGAC+TGG | + | chr2_1:62999961-62999980 | Msa0216810:intron | 60.0% | |
| GACGTCGCTGGAGTTGACTG+AGG | - | chr2_1:63001295-63001314 | None:intergenic | 60.0% | |
| !! | CAGACCCACGGATTGGCCAA+GGG | - | chr2_1:63001476-63001495 | None:intergenic | 60.0% |
| !! | ACAGACCCACGGATTGGCCA+AGG | - | chr2_1:63001477-63001496 | None:intergenic | 60.0% |
| TCCGGTACCTTGCGAGGAGC+TGG | - | chr2_1:62999223-62999242 | None:intergenic | 65.0% | |
| !! | TCCTCGCAAGGTACCGGAGC+AGG | + | chr2_1:62999225-62999244 | Msa0216810:CDS | 65.0% |
| ACCTGCTCCGGTACCTTGCG+AGG | - | chr2_1:62999229-62999248 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 62995903 | 63001723 | 62995903 | ID=Msa0216810;Name=Msa0216810 |
| chr2_1 | mRNA | 62995903 | 63001723 | 62995903 | ID=Msa0216810-mRNA-1;Parent=Msa0216810;Name=Msa0216810-mRNA-1;_AED=0.09;_eAED=0.09;_QI=209|0.8|0.81|1|0.8|0.90|11|339|487 |
| chr2_1 | exon | 62995903 | 62996162 | 62995903 | ID=Msa0216810-mRNA-1:exon:17483;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62997426 | 62997484 | 62997426 | ID=Msa0216810-mRNA-1:exon:17484;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62997666 | 62997791 | 62997666 | ID=Msa0216810-mRNA-1:exon:17485;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62998647 | 62998701 | 62998647 | ID=Msa0216810-mRNA-1:exon:17486;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62998793 | 62998908 | 62998793 | ID=Msa0216810-mRNA-1:exon:17487;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62999021 | 62999246 | 62999021 | ID=Msa0216810-mRNA-1:exon:17488;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62999366 | 62999591 | 62999366 | ID=Msa0216810-mRNA-1:exon:17489;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 62999971 | 63000128 | 62999971 | ID=Msa0216810-mRNA-1:exon:17490;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 63000251 | 63000484 | 63000251 | ID=Msa0216810-mRNA-1:exon:17491;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 63000578 | 63000636 | 63000578 | ID=Msa0216810-mRNA-1:exon:17492;Parent=Msa0216810-mRNA-1 |
| chr2_1 | exon | 63001231 | 63001723 | 63001231 | ID=Msa0216810-mRNA-1:exon:17493;Parent=Msa0216810-mRNA-1 |
| chr2_1 | five_prime_UTR | 62995903 | 62996111 | 62995903 | ID=Msa0216810-mRNA-1:five_prime_utr;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62996112 | 62996162 | 62996112 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62997426 | 62997484 | 62997426 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62997666 | 62997791 | 62997666 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62998647 | 62998701 | 62998647 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62998793 | 62998908 | 62998793 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62999021 | 62999246 | 62999021 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62999366 | 62999591 | 62999366 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 62999971 | 63000128 | 62999971 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 63000251 | 63000484 | 63000251 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 63000578 | 63000636 | 63000578 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | CDS | 63001231 | 63001384 | 63001231 | ID=Msa0216810-mRNA-1:cds;Parent=Msa0216810-mRNA-1 |
| chr2_1 | three_prime_UTR | 63001385 | 63001723 | 63001385 | ID=Msa0216810-mRNA-1:three_prime_utr;Parent=Msa0216810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
