Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691450 | XP_013442471.1 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 4.07e-162 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691450 | sp|O23708|PSA2A_ARATH | 89.958 | 239 | 20 | 1 | 1 | 239 | 1 | 235 | 1.26e-155 | 434 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691450 | I3RZ63 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 1.94e-162 | 457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0691450 | 0.810327 | 1.218105e-50 | -8.615850e-47 |
| Msa0076000 | Msa0691450 | 0.817622 | 2.997879e-52 | -8.615850e-47 |
| Msa0094470 | Msa0691450 | 0.803220 | 3.867741e-49 | -8.615850e-47 |
| Msa0608440 | Msa0691450 | 0.844563 | 6.996098e-59 | -8.615850e-47 |
| Msa0643180 | Msa0691450 | 0.802135 | 6.476853e-49 | -8.615850e-47 |
| Msa0691450 | Msa0691900 | 0.830027 | 3.701213e-55 | -8.615850e-47 |
| Msa0691450 | Msa0902760 | 0.817135 | 3.858167e-52 | -8.615850e-47 |
| Msa0691450 | Msa1013400 | 0.814841 | 1.254196e-51 | -8.615850e-47 |
| Msa0691450 | Msa1055410 | 0.821806 | 3.318581e-53 | -8.615850e-47 |
| Msa0691450 | Msa1081150 | 0.809152 | 2.179346e-50 | -8.615850e-47 |
| Msa0691450 | Msa1081560 | 0.806754 | 7.054473e-50 | -8.615850e-47 |
| Msa0691450 | Msa1093530 | 0.815183 | 1.053135e-51 | -8.615850e-47 |
| Msa0691450 | Msa1104140 | 0.813671 | 2.274598e-51 | -8.615850e-47 |
| Msa0691450 | Msa1127130 | 0.806046 | 9.946030e-50 | -8.615850e-47 |
| Msa0691450 | Msa1166410 | 0.809219 | 2.108730e-50 | -8.615850e-47 |
| Msa0691450 | Msa1218600 | 0.811570 | 6.554751e-51 | -8.615850e-47 |
| Msa0691450 | Msa1237940 | 0.810269 | 1.253501e-50 | -8.615850e-47 |
| Msa0691450 | Msa1316830 | 0.821148 | 4.710664e-53 | -8.615850e-47 |
| Msa0691450 | Msa1387420 | 0.808425 | 3.116368e-50 | -8.615850e-47 |
| Msa0691450 | Msa1394290 | 0.811325 | 7.407842e-51 | -8.615850e-47 |
| Msa0691450 | Msa1466300 | 0.808440 | 3.093663e-50 | -8.615850e-47 |
| Msa0127310 | Msa0691450 | 0.801806 | 7.566807e-49 | -8.615850e-47 |
| Msa0226470 | Msa0691450 | 0.802837 | 4.641302e-49 | -8.615850e-47 |
| Msa0227400 | Msa0691450 | 0.832563 | 8.801745e-56 | -8.615850e-47 |
| Msa0402330 | Msa0691450 | 0.801078 | 1.067072e-48 | -8.615850e-47 |
| Msa0264570 | Msa0691450 | 0.804631 | 1.969358e-49 | -8.615850e-47 |
| Msa0355270 | Msa0691450 | 0.803423 | 3.510405e-49 | -8.615850e-47 |
| Msa0554860 | Msa0691450 | 0.926457 | 4.565567e-91 | -8.615850e-47 |
| Msa0557070 | Msa0691450 | 0.810124 | 1.347352e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691450 | MtrunA17_Chr0c02g0489661 | 95.397 | 239 | 7 | 1 | 1 | 239 | 1 | 235 | 3.74e-166 | 457 |
| Msa0691450 | MtrunA17_Chr8g0371571 | 38.627 | 233 | 130 | 5 | 4 | 232 | 2 | 225 | 1.46e-49 | 162 |
| Msa0691450 | MtrunA17_Chr2g0308541 | 38.723 | 235 | 135 | 5 | 6 | 235 | 9 | 239 | 1.50e-49 | 162 |
| Msa0691450 | MtrunA17_Chr7g0243311 | 36.134 | 238 | 141 | 5 | 5 | 235 | 4 | 237 | 2.10e-45 | 152 |
| Msa0691450 | MtrunA17_Chr2g0283841 | 37.229 | 231 | 136 | 4 | 4 | 232 | 2 | 225 | 4.83e-44 | 148 |
| Msa0691450 | MtrunA17_Chr8g0360781 | 37.447 | 235 | 138 | 5 | 6 | 235 | 9 | 239 | 5.95e-44 | 148 |
| Msa0691450 | MtrunA17_Chr1g0210811 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 2.26e-43 | 146 |
| Msa0691450 | MtrunA17_Chr5g0401801 | 40.415 | 193 | 109 | 3 | 5 | 195 | 4 | 192 | 3.01e-43 | 145 |
| Msa0691450 | MtrunA17_Chr1g0155371 | 33.624 | 229 | 143 | 4 | 1 | 226 | 1 | 223 | 3.69e-37 | 131 |
| Msa0691450 | MtrunA17_Chr6g0459741 | 34.225 | 187 | 119 | 1 | 6 | 192 | 8 | 190 | 8.46e-35 | 124 |
| Msa0691450 | MtrunA17_Chr4g0004521 | 29.864 | 221 | 132 | 6 | 20 | 226 | 7 | 218 | 2.65e-23 | 95.1 |
| Msa0691450 | MtrunA17_Chr6g0453891 | 29.016 | 193 | 121 | 6 | 32 | 218 | 136 | 318 | 1.01e-13 | 69.3 |
| Msa0691450 | MtrunA17_Chr3g0142511 | 32.692 | 104 | 67 | 2 | 126 | 226 | 30 | 133 | 2.74e-13 | 66.2 |
| Msa0691450 | MtrunA17_Chr4g0027841 | 26.582 | 237 | 158 | 8 | 9 | 238 | 91 | 318 | 1.79e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0691450 | AT1G16470.1 | 89.958 | 239 | 20 | 1 | 1 | 239 | 1 | 235 | 1.28e-156 | 434 |
| Msa0691450 | AT1G16470.2 | 89.958 | 239 | 20 | 1 | 1 | 239 | 1 | 235 | 1.28e-156 | 434 |
| Msa0691450 | AT1G79210.1 | 89.121 | 239 | 22 | 1 | 1 | 239 | 1 | 235 | 1.67e-155 | 431 |
| Msa0691450 | AT1G79210.2 | 89.121 | 239 | 22 | 1 | 1 | 239 | 1 | 235 | 1.67e-155 | 431 |
| Msa0691450 | AT1G79210.3 | 89.121 | 239 | 22 | 1 | 1 | 239 | 1 | 235 | 1.67e-155 | 431 |
| Msa0691450 | AT5G66140.1 | 39.316 | 234 | 128 | 6 | 4 | 232 | 2 | 226 | 5.01e-48 | 159 |
| Msa0691450 | AT3G51260.1 | 38.889 | 234 | 129 | 6 | 4 | 232 | 2 | 226 | 1.29e-46 | 155 |
| Msa0691450 | AT3G51260.2 | 39.908 | 218 | 118 | 5 | 4 | 217 | 2 | 210 | 1.92e-46 | 155 |
| Msa0691450 | AT5G35590.1 | 36.170 | 235 | 141 | 5 | 6 | 235 | 9 | 239 | 4.45e-44 | 149 |
| Msa0691450 | AT1G53850.1 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 2.99e-43 | 146 |
| Msa0691450 | AT1G53850.2 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 2.99e-43 | 146 |
| Msa0691450 | AT3G14290.1 | 35.043 | 234 | 139 | 4 | 4 | 232 | 6 | 231 | 5.47e-43 | 145 |
| Msa0691450 | AT3G22110.1 | 35.193 | 233 | 137 | 5 | 5 | 234 | 4 | 225 | 2.00e-42 | 144 |
| Msa0691450 | AT2G05840.1 | 35.021 | 237 | 141 | 6 | 6 | 235 | 9 | 239 | 3.13e-41 | 141 |
| Msa0691450 | AT5G42790.1 | 36.245 | 229 | 137 | 5 | 1 | 226 | 1 | 223 | 4.23e-39 | 137 |
| Msa0691450 | AT1G47250.1 | 34.615 | 234 | 144 | 5 | 1 | 231 | 1 | 228 | 2.45e-37 | 132 |
| Msa0691450 | AT2G05840.2 | 33.803 | 213 | 133 | 4 | 6 | 214 | 9 | 217 | 3.66e-35 | 125 |
| Msa0691450 | AT2G05840.3 | 34.615 | 182 | 113 | 3 | 6 | 185 | 9 | 186 | 7.29e-32 | 116 |
| Msa0691450 | AT2G27020.1 | 31.193 | 218 | 145 | 2 | 6 | 222 | 8 | 221 | 8.01e-32 | 117 |
| Msa0691450 | AT2G27020.2 | 31.193 | 218 | 145 | 2 | 6 | 222 | 110 | 323 | 1.17e-30 | 116 |
| Msa0691450 | AT4G15165.1 | 26.609 | 233 | 115 | 5 | 5 | 234 | 4 | 183 | 3.52e-21 | 88.2 |
Find 90 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAACGATTGCAAAGATTT+TGG | 0.152013 | 4_4:+59588028 | None:intergenic |
| AGCTGAAATTGATGATTATT+TGG | 0.158426 | 4_4:-59581485 | Msa0691450:CDS |
| AATAAATTAGTGTTCATTAA+AGG | 0.239694 | 4_4:+59581219 | None:intergenic |
| GGAGTGTCTCTGCTTGTTGC+TGG | 0.248519 | 4_4:-59584076 | Msa0691450:CDS |
| CTTATTTATTTGCGATGAAT+TGG | 0.258291 | 4_4:-59581165 | Msa0691450:three_prime_UTR |
| GCTTTAACCGCTGTTGGTTC+TGG | 0.270331 | 4_4:-59587358 | Msa0691450:CDS |
| TTTGTTTCTCTTTCCAGTTC+AGG | 0.288932 | 4_4:-59588134 | Msa0691450:five_prime_UTR |
| GAATTGGGGATCTTAAATTA+AGG | 0.298804 | 4_4:-59581149 | Msa0691450:three_prime_UTR |
| CTGTATACAACACCTATATT+TGG | 0.326037 | 4_4:+59587128 | None:intergenic |
| ATGCAGGAATTTACTCAGTC+TGG | 0.330425 | 4_4:-59584883 | Msa0691450:CDS |
| AGGTGCAATCGGATAATAAA+AGG | 0.343590 | 4_4:+59581191 | None:intergenic |
| TTCTAGGTACACCGATGATA+TGG | 0.345310 | 4_4:-59583416 | Msa0691450:intron |
| GTTGCTGGGTTTGATGATAA+TGG | 0.347033 | 4_4:-59584061 | Msa0691450:CDS |
| GCTTCATCAACCAATATAGA+TGG | 0.347807 | 4_4:+59587274 | None:intergenic |
| TTATTTATTTGCGATGAATT+GGG | 0.353079 | 4_4:-59581164 | Msa0691450:three_prime_UTR |
| GTCTTTGTTGTTCAGTGGCA+TGG | 0.357696 | 4_4:-59585396 | Msa0691450:intron |
| CGAACCAATACTCGGAAATC+AGG | 0.360536 | 4_4:+59585371 | None:intergenic |
| GAAAATAGTGGGACCTGAAC+TGG | 0.362177 | 4_4:+59588121 | None:intergenic |
| ACAAGATGCTAAGATAATTC+AGG | 0.365742 | 4_4:+59581123 | None:intergenic |
| GAAGAAACTCCCATCTATAT+TGG | 0.368608 | 4_4:-59587284 | Msa0691450:CDS |
| AACATTGAAATCGGCATCAT+TGG | 0.369450 | 4_4:-59582783 | Msa0691450:CDS |
| CAAATATAGGTGTTGTATAC+AGG | 0.377485 | 4_4:-59587127 | Msa0691450:intron |
| TGCTTCGAGAGGAACTGTTT+TGG | 0.381376 | 4_4:+59587972 | None:intergenic |
| GATAGTGGTGTCCGGCCATT+TGG | 0.384275 | 4_4:-59584097 | Msa0691450:intron |
| GCTGAAATTGATGATTATTT+GGG | 0.402207 | 4_4:-59581484 | Msa0691450:CDS |
| TGACAATGAAGGAAGGGTTC+AGG | 0.403066 | 4_4:+59588004 | None:intergenic |
| ATTTCAACACCGAACGAATA+CGG | 0.405644 | 4_4:-59588177 | Msa0691450:five_prime_UTR |
| ATGAAATAAACACCAACTTC+GGG | 0.412111 | 4_4:+59581419 | None:intergenic |
| TAATGGACCACAATTATATC+AGG | 0.419454 | 4_4:-59584044 | Msa0691450:intron |
| TATATAATCAAATCAAATCA+TGG | 0.431364 | 4_4:-59587449 | Msa0691450:exon |
| AAACATTCAAAGGAAAATAG+TGG | 0.432811 | 4_4:+59588109 | None:intergenic |
| TATGGTAATTCTGATGACTT+TGG | 0.433271 | 4_4:+59581305 | None:intergenic |
| CTCGGTATCAAAGCTGCAAA+TGG | 0.434339 | 4_4:-59587325 | Msa0691450:CDS |
| GAGTGTCTCTGCTTGTTGCT+GGG | 0.436297 | 4_4:-59584075 | Msa0691450:CDS |
| GGAAGAGGAGATGACAATGA+AGG | 0.436563 | 4_4:+59587993 | None:intergenic |
| TTGCTGTAGGTGGATCCATC+AGG | 0.438333 | 4_4:-59583722 | Msa0691450:intron |
| TCCCTGTCACTCAACTTGTA+AGG | 0.441365 | 4_4:-59584921 | Msa0691450:CDS |
| ACACCAACTTCGGGAACATA+AGG | 0.445040 | 4_4:+59581428 | None:intergenic |
| GGGTCCTGATTTCCGAGTAT+TGG | 0.446397 | 4_4:-59585375 | Msa0691450:CDS |
| CAGTTATTAACACCAAATAT+AGG | 0.451124 | 4_4:-59587140 | Msa0691450:CDS |
| TAAATAAGATAAGGTGCAAT+CGG | 0.451592 | 4_4:+59581180 | None:intergenic |
| TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 4_4:-59583689 | Msa0691450:CDS |
| CATCCTTATGTTCCCGAAGT+TGG | 0.459206 | 4_4:-59581431 | Msa0691450:three_prime_UTR |
| CTGTTGGTTCCGTATTCGTT+CGG | 0.465066 | 4_4:+59588168 | None:intergenic |
| GGAAGTTGCTGCCGTTATGC+AGG | 0.465077 | 4_4:-59584899 | Msa0691450:CDS |
| TATGAAATAAACACCAACTT+CGG | 0.469621 | 4_4:+59581418 | None:intergenic |
| TCTTTGTTGTTCAGTGGCAT+GGG | 0.469804 | 4_4:-59585395 | Msa0691450:intron |
| TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 4_4:-59583690 | Msa0691450:CDS |
| TCCCTTACAAGTTGAGTGAC+AGG | 0.479106 | 4_4:+59584919 | None:intergenic |
| ACAAGTTGAGTGACAGGGAA+TGG | 0.493125 | 4_4:+59584925 | None:intergenic |
| CATCGCAAATAAATAAGATA+AGG | 0.497739 | 4_4:+59581171 | None:intergenic |
| AGTTTAATTGAATTTCAAGA+TGG | 0.499567 | 4_4:-59581391 | Msa0691450:three_prime_UTR |
| TTTGTCCTGATAGTGGTGTC+CGG | 0.504083 | 4_4:-59584105 | Msa0691450:intron |
| GAGCATGCTTTAACCGCTGT+TGG | 0.504625 | 4_4:-59587364 | Msa0691450:CDS |
| CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 4_4:-59583649 | Msa0691450:intron |
| GAGGAGATGACAATGAAGGA+AGG | 0.513758 | 4_4:+59587997 | None:intergenic |
| TGCAGGAATTTACTCAGTCT+GGG | 0.516768 | 4_4:-59584882 | Msa0691450:intron |
| GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 4_4:-59587343 | Msa0691450:CDS |
| ACAAAATTCGACTGTACTGT+TGG | 0.526583 | 4_4:+59588152 | None:intergenic |
| TATTTATTTGCGATGAATTG+GGG | 0.527893 | 4_4:-59581163 | Msa0691450:three_prime_UTR |
| GTTTAATTGAATTTCAAGAT+GGG | 0.536767 | 4_4:-59581390 | Msa0691450:three_prime_UTR |
| AAATAATCATCAATTTCAGC+TGG | 0.537679 | 4_4:+59581487 | None:intergenic |
| AACAAGTATACAAACATGAG+TGG | 0.539734 | 4_4:+59588213 | None:intergenic |
| CCCTGTCACTCAACTTGTAA+GGG | 0.541679 | 4_4:-59584920 | Msa0691450:CDS |
| CTGAGTAAATTCCTGCATAA+CGG | 0.544918 | 4_4:+59584888 | None:intergenic |
| CTTCATCAACCAATATAGAT+GGG | 0.557361 | 4_4:+59587275 | None:intergenic |
| TTAAATGTATGATATGTGAA+TGG | 0.573767 | 4_4:-59581242 | Msa0691450:intron |
| ACAAGCAGAGACACTCCAAA+TGG | 0.574302 | 4_4:+59584082 | None:intergenic |
| ATATAATCAAATCAAATCAT+GGG | 0.575451 | 4_4:-59587448 | Msa0691450:exon |
| GCAATATTGACACTCAAGGA+AGG | 0.576853 | 4_4:-59583370 | Msa0691450:CDS |
| AACATTCAAAGGAAAATAGT+GGG | 0.585146 | 4_4:+59588110 | None:intergenic |
| GCAGAGACACTCCAAATGGC+CGG | 0.585825 | 4_4:+59584086 | None:intergenic |
| CCCTTACAAGTTGAGTGACA+GGG | 0.588142 | 4_4:+59584920 | None:intergenic |
| TTTGTGTCAAAGCAATACCT+GGG | 0.591200 | 4_4:-59588268 | None:intergenic |
| TGCCATACCTGATATAATTG+TGG | 0.592498 | 4_4:+59584037 | None:intergenic |
| CAACTTCGGGAACATAAGGA+TGG | 0.599592 | 4_4:+59581432 | None:intergenic |
| GGTGTTGAAATAGAAAGTGT+AGG | 0.599628 | 4_4:+59588189 | None:intergenic |
| ATCATCAAGCTCCATATCAT+CGG | 0.601420 | 4_4:+59583405 | None:intergenic |
| TGTTTCAAAATTGCTTCGAG+AGG | 0.603777 | 4_4:+59587961 | None:intergenic |
| ATTTGAACAAGCTTGCCAGA+AGG | 0.604598 | 4_4:+59587388 | None:intergenic |
| CACAGCAATATTGACACTCA+AGG | 0.611442 | 4_4:-59583374 | Msa0691450:CDS |
| ATGAAGACTTGTGATGGCAC+TGG | 0.611959 | 4_4:-59581360 | Msa0691450:three_prime_UTR |
| AGGAGATGACAATGAAGGAA+GGG | 0.616055 | 4_4:+59587998 | None:intergenic |
| ACAAGTATACAAACATGAGT+GGG | 0.620557 | 4_4:+59588214 | None:intergenic |
| CAATATTGACACTCAAGGAA+GGG | 0.636489 | 4_4:-59583369 | Msa0691450:intron |
| TGATCAATGAAGACTTGTGA+TGG | 0.639717 | 4_4:-59581366 | Msa0691450:three_prime_UTR |
| CTTGGAAAGCTTCTGCTATG+GGG | 0.641428 | 4_4:-59583688 | Msa0691450:CDS |
| GTGTAACCAGAAACATTCAA+AGG | 0.655198 | 4_4:+59588099 | None:intergenic |
| TGAGTGTCAATATTGCTGTG+TGG | 0.689041 | 4_4:+59583377 | None:intergenic |
| AGTTTGTCCAGAACCAACAG+CGG | 0.695714 | 4_4:+59587351 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAAAAAAAAAAAA+AGG | + | chr4_4:59584771-59584790 | None:intergenic | 0.0% |
| !!! | TTAATTTTATTTTTTGTGTA+TGG | - | chr4_4:59581586-59581605 | Msa0691450:intron | 10.0% |
| !!! | TAATTTTATTTTTTGTGTAT+GGG | - | chr4_4:59581587-59581606 | Msa0691450:intron | 10.0% |
| !!! | CTAAAATTTTATGTTAATTT+GGG | - | chr4_4:59581793-59581812 | Msa0691450:intron | 10.0% |
| !! | AACTATATAAATTTAATCTA+AGG | + | chr4_4:59583272-59583291 | None:intergenic | 10.0% |
| !! | AATTTATATAGTTATTTAAC+CGG | - | chr4_4:59583279-59583298 | Msa0691450:intron | 10.0% |
| !!! | TATGCAATATATATTTTTAA+TGG | - | chr4_4:59587605-59587624 | Msa0691450:intron | 10.0% |
| !!! | TTTTATTTATGCTTTCAATT+TGG | - | chr4_4:59581523-59581542 | Msa0691450:intron | 15.0% |
| !! | TTCAGAAAATTTATATGAAA+AGG | - | chr4_4:59581752-59581771 | Msa0691450:intron | 15.0% |
| !! | TCAGAAAATTTATATGAAAA+GGG | - | chr4_4:59581753-59581772 | Msa0691450:intron | 15.0% |
| !!! | GCTAAAATTTTATGTTAATT+TGG | - | chr4_4:59581792-59581811 | Msa0691450:intron | 15.0% |
| !!! | TTTATTTTTTTTTCTTGACT+AGG | - | chr4_4:59581865-59581884 | Msa0691450:intron | 15.0% |
| !!! | TTATTTTTTTTTCTTGACTA+GGG | - | chr4_4:59581866-59581885 | Msa0691450:intron | 15.0% |
| !!! | GTTTTTTATTGTGATTTTAT+AGG | - | chr4_4:59581918-59581937 | Msa0691450:intron | 15.0% |
| !! | TATATAATCAAATCAAATCA+TGG | - | chr4_4:59581941-59581960 | Msa0691450:intron | 15.0% |
| !! | ATATAATCAAATCAAATCAT+GGG | - | chr4_4:59581942-59581961 | Msa0691450:intron | 15.0% |
| !! | CTTATTAAAGAATTAATAGA+AGG | - | chr4_4:59582812-59582831 | Msa0691450:intron | 15.0% |
| !! | AAGTAATTTATAAATGTACT+TGG | - | chr4_4:59582906-59582925 | Msa0691450:intron | 15.0% |
| !!! | AGTTTTTATCTTATTTTACA+GGG | + | chr4_4:59583357-59583376 | None:intergenic | 15.0% |
| !!! | TAGTTTTTATCTTATTTTAC+AGG | + | chr4_4:59583358-59583377 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAGCAAAAAAC+CGG | - | chr4_4:59583685-59583704 | Msa0691450:CDS | 15.0% |
| !! | TATATTGTTTAAATGTTACT+TGG | - | chr4_4:59584155-59584174 | Msa0691450:intron | 15.0% |
| !! | TAAAATTGAAAAGTTAATGA+AGG | + | chr4_4:59585256-59585275 | None:intergenic | 15.0% |
| !!! | GAAATATGATATTTTCATTA+AGG | + | chr4_4:59586083-59586102 | None:intergenic | 15.0% |
| !!! | TCCCTTTTATTTTATTTTTT+CGG | - | chr4_4:59586549-59586568 | Msa0691450:intron | 15.0% |
| !! | ACCGAAAAAATAAAATAAAA+GGG | + | chr4_4:59586553-59586572 | None:intergenic | 15.0% |
| !! | AAATAAATAAACACTGAAAA+GGG | + | chr4_4:59586710-59586729 | None:intergenic | 15.0% |
| !!! | TAATTTGTTAATTATATTGC+AGG | - | chr4_4:59587871-59587890 | Msa0691450:intron | 15.0% |
| !!! | AATTTGTTAATTATATTGCA+GGG | - | chr4_4:59587872-59587891 | Msa0691450:intron | 15.0% |
| !! | AATAAATTAGTGTTCATTAA+AGG | + | chr4_4:59588174-59588193 | None:intergenic | 15.0% |
| !!! | GGGAATTAAGTTTTATTTAA+GGG | + | chr4_4:59581335-59581354 | None:intergenic | 20.0% |
| !!! | TGGGAATTAAGTTTTATTTA+AGG | + | chr4_4:59581336-59581355 | None:intergenic | 20.0% |
| !!! | GTTTTTATCTTATTTTACAG+GGG | + | chr4_4:59583356-59583375 | None:intergenic | 20.0% |
| !! | TCCAACAATAATAATTTCAT+AGG | - | chr4_4:59583378-59583397 | Msa0691450:CDS | 20.0% |
| !!! | AATTGGAATCATACTTTTTT+GGG | + | chr4_4:59583472-59583491 | None:intergenic | 20.0% |
| !! | TATTGAATTTATGTTGGAAT+TGG | + | chr4_4:59583489-59583508 | None:intergenic | 20.0% |
| !! | ATCTCTTATTGAATTTATGT+TGG | + | chr4_4:59583495-59583514 | None:intergenic | 20.0% |
| !! | ATCAATAACATTTAATTCCA+AGG | - | chr4_4:59583577-59583596 | Msa0691450:intron | 20.0% |
| !! | TGATACTTGAAAACAATTTA+AGG | + | chr4_4:59583953-59583972 | None:intergenic | 20.0% |
| !! | AAGAATTTCGCAATATAAAA+TGG | + | chr4_4:59584096-59584115 | None:intergenic | 20.0% |
| !!! | CATCTTTTGTTAAAAATAAC+AGG | - | chr4_4:59584409-59584428 | Msa0691450:intron | 20.0% |
| !! | AAAAAAAAAAAAAAGGACAC+AGG | + | chr4_4:59584764-59584783 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAGTGAAGACAAT+AGG | + | chr4_4:59584868-59584887 | None:intergenic | 20.0% |
| !! | TAGCTAAATTAAATGTTTAG+TGG | - | chr4_4:59584937-59584956 | Msa0691450:CDS | 20.0% |
| !!! | TTGCACTTAGAATTTTTTAA+AGG | - | chr4_4:59585585-59585604 | Msa0691450:intron | 20.0% |
| !!! | ATTAATGATGACAATGTTTT+AGG | - | chr4_4:59585775-59585794 | Msa0691450:intron | 20.0% |
| !!! | CAATTTAAAACACTGAATTA+AGG | + | chr4_4:59586214-59586233 | None:intergenic | 20.0% |
| !!! | CTTAATTCAGTGTTTTAAAT+TGG | - | chr4_4:59586212-59586231 | Msa0691450:intron | 20.0% |
| !! | CACCGAAAAAATAAAATAAA+AGG | + | chr4_4:59586554-59586573 | None:intergenic | 20.0% |
| !! | CAAATAAATAAACACTGAAA+AGG | + | chr4_4:59586711-59586730 | None:intergenic | 20.0% |
| !!! | CAAACTTATTTATAGCTTTT+AGG | + | chr4_4:59586809-59586828 | None:intergenic | 20.0% |
| !! | AAAAGCTATAAATAAGTTTG+AGG | - | chr4_4:59586809-59586828 | Msa0691450:intron | 20.0% |
| !!! | GCAATATATATTTTTAATGG+AGG | - | chr4_4:59587608-59587627 | Msa0691450:intron | 20.0% |
| !!! | TTTCTTTTCTTAATTTTTGC+TGG | - | chr4_4:59587777-59587796 | Msa0691450:intron | 20.0% |
| !! | AGTTTAATTGAATTTCAAGA+TGG | - | chr4_4:59587999-59588018 | Msa0691450:five_prime_UTR | 20.0% |
| !! | GTTTAATTGAATTTCAAGAT+GGG | - | chr4_4:59588000-59588019 | Msa0691450:five_prime_UTR | 20.0% |
| !! | TTAAATGTATGATATGTGAA+TGG | - | chr4_4:59588148-59588167 | Msa0691450:five_prime_UTR | 20.0% |
| !! | TTATTTATTTGCGATGAATT+GGG | - | chr4_4:59588226-59588245 | Msa0691450:five_prime_UTR | 20.0% |
| ! | AACATTCAAAGGAAAATAGT+GGG | + | chr4_4:59581283-59581302 | None:intergenic | 25.0% |
| ! | AAACATTCAAAGGAAAATAG+TGG | + | chr4_4:59581284-59581303 | None:intergenic | 25.0% |
| !! | TATTTTCCTTTGAATGTTTC+TGG | - | chr4_4:59581285-59581304 | Msa0691450:intron | 25.0% |
| !! | AAAACACAATTTTCTAACCT+TGG | + | chr4_4:59581456-59581475 | None:intergenic | 25.0% |
| !! | GATTACATTTCTCTTTTGAA+AGG | - | chr4_4:59581654-59581673 | Msa0691450:intron | 25.0% |
| !! | TACCATCAATTTAGAGTTTA+TGG | - | chr4_4:59581705-59581724 | Msa0691450:intron | 25.0% |
| !!! | TCTTTTTCAAAATGTGAACT+TGG | + | chr4_4:59581838-59581857 | None:intergenic | 25.0% |
| ! | TCAAAATCTTGAGAAATTGA+TGG | + | chr4_4:59582168-59582187 | None:intergenic | 25.0% |
| ! | CAGTTATTAACACCAAATAT+AGG | - | chr4_4:59582250-59582269 | Msa0691450:intron | 25.0% |
| ! | TAAGTTCGAACATATTTGTA+TGG | - | chr4_4:59582310-59582329 | Msa0691450:intron | 25.0% |
| ! | ACAGTTATGATGTTATCATA+GGG | + | chr4_4:59582687-59582706 | None:intergenic | 25.0% |
| ! | AACAGTTATGATGTTATCAT+AGG | + | chr4_4:59582688-59582707 | None:intergenic | 25.0% |
| !!! | GCAAAACAATCTTCTTTTTT+GGG | + | chr4_4:59583092-59583111 | None:intergenic | 25.0% |
| !!! | AGCAAAACAATCTTCTTTTT+TGG | + | chr4_4:59583093-59583112 | None:intergenic | 25.0% |
| ! | GCCTATGAAATTATTATTGT+TGG | + | chr4_4:59583382-59583401 | None:intergenic | 25.0% |
| ! | TCATAACTCAAAATACATCT+TGG | - | chr4_4:59583426-59583445 | Msa0691450:intron | 25.0% |
| !!! | ATACTTTTTTGGGATCTATT+TGG | + | chr4_4:59583462-59583481 | None:intergenic | 25.0% |
| !!! | GAATTGGAATCATACTTTTT+TGG | + | chr4_4:59583473-59583492 | None:intergenic | 25.0% |
| !! | TTTTTGGATTTTTACAACTG+GGG | + | chr4_4:59583520-59583539 | None:intergenic | 25.0% |
| !! | CTTTTTGGATTTTTACAACT+GGG | + | chr4_4:59583521-59583540 | None:intergenic | 25.0% |
| !! | TCTTTTTGGATTTTTACAAC+TGG | + | chr4_4:59583522-59583541 | None:intergenic | 25.0% |
| !! | ATACTTTCTTTGGATCTTTT+TGG | + | chr4_4:59583536-59583555 | None:intergenic | 25.0% |
| ! | TGTTGGAATTATACTTTCTT+TGG | + | chr4_4:59583546-59583565 | None:intergenic | 25.0% |
| !! | ATTGATGATAATACTTGTGT+TGG | + | chr4_4:59583563-59583582 | None:intergenic | 25.0% |
| ! | AATATTTGGTCAATATGACT+CGG | - | chr4_4:59584131-59584150 | Msa0691450:intron | 25.0% |
| ! | AGAGAAAAAAAAATGCTCTA+AGG | + | chr4_4:59584338-59584357 | None:intergenic | 25.0% |
| ! | ATACCAAATGATAACAGAAA+AGG | + | chr4_4:59584380-59584399 | None:intergenic | 25.0% |
| ! | TATTGTAAGCAAAAAATTGC+AGG | - | chr4_4:59584440-59584459 | Msa0691450:intron | 25.0% |
| ! | ACATATATGGTAAAGTTCAA+CGG | + | chr4_4:59584611-59584630 | None:intergenic | 25.0% |
| ! | ATAAGCTATGAGTACATATA+TGG | + | chr4_4:59584624-59584643 | None:intergenic | 25.0% |
| ! | ATTTACCAAAAACTCAAAGT+TGG | + | chr4_4:59584724-59584743 | None:intergenic | 25.0% |
| !!! | TGTTGAATCTTTTTTAGTGA+GGG | + | chr4_4:59584809-59584828 | None:intergenic | 25.0% |
| ! | ATTGTGAAACTTTCCAAATT+TGG | - | chr4_4:59584900-59584919 | Msa0691450:CDS | 25.0% |
| ! | TCAACATTTAATGATAATCG+GGG | + | chr4_4:59584979-59584998 | None:intergenic | 25.0% |
| ! | CTCAACATTTAATGATAATC+GGG | + | chr4_4:59584980-59584999 | None:intergenic | 25.0% |
| ! | CCTCAACATTTAATGATAAT+CGG | + | chr4_4:59584981-59585000 | None:intergenic | 25.0% |
| ! | CGATTATCATTAAATGTTGA+GGG | - | chr4_4:59584979-59584998 | Msa0691450:intron | 25.0% |
| ! | ATAAACATTGTGTTTCCTAT+TGG | - | chr4_4:59585128-59585147 | Msa0691450:intron | 25.0% |
| ! | AATTGAAAAGTTAATGAAGG+AGG | + | chr4_4:59585253-59585272 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTGTCCTGATAG+TGG | - | chr4_4:59585278-59585297 | Msa0691450:intron | 25.0% |
| !!! | AGAAAATTGAAGGTTGTTTT+TGG | - | chr4_4:59585633-59585652 | Msa0691450:intron | 25.0% |
| ! | ATGAATTGATAGAGATATTG+AGG | + | chr4_4:59585932-59585951 | None:intergenic | 25.0% |
| !! | TTTCATTCTTAGAGTTGATT+AGG | - | chr4_4:59586099-59586118 | Msa0691450:intron | 25.0% |
| ! | GGTTCAAATGAAAAAAATAG+AGG | - | chr4_4:59586266-59586285 | Msa0691450:intron | 25.0% |
| !! | CAGCTTATGATAATTTTAGA+GGG | + | chr4_4:59586358-59586377 | None:intergenic | 25.0% |
| !! | TCAGCTTATGATAATTTTAG+AGG | + | chr4_4:59586359-59586378 | None:intergenic | 25.0% |
| ! | ACATAAAAACTGTCAATGAA+GGG | + | chr4_4:59586457-59586476 | None:intergenic | 25.0% |
| ! | AACATAAAAACTGTCAATGA+AGG | + | chr4_4:59586458-59586477 | None:intergenic | 25.0% |
| ! | TCAGCAAAAAACATTGAAAT+CGG | - | chr4_4:59586598-59586617 | Msa0691450:intron | 25.0% |
| ! | TTGTTCCCTAAAATATACTT+TGG | - | chr4_4:59586658-59586677 | Msa0691450:intron | 25.0% |
| ! | TGAGCTAAAAATTATGCTAT+CGG | - | chr4_4:59586767-59586786 | Msa0691450:intron | 25.0% |
| !! | ATAAATAAGTTTGAGGCATT+CGG | - | chr4_4:59586816-59586835 | Msa0691450:intron | 25.0% |
| ! | TCTAAACTATAAAACAAACC+AGG | + | chr4_4:59587491-59587510 | None:intergenic | 25.0% |
| !!! | ATGTCATTGATTTCAAAACA+TGG | + | chr4_4:59587564-59587583 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTACCAATGCAAA+TGG | - | chr4_4:59587722-59587741 | Msa0691450:intron | 25.0% |
| !! | TTTTCTTAATTTTTGCTGGT+GGG | - | chr4_4:59587781-59587800 | Msa0691450:intron | 25.0% |
| ! | AAATAATCATCAATTTCAGC+TGG | + | chr4_4:59587906-59587925 | None:intergenic | 25.0% |
| !! | AGCTGAAATTGATGATTATT+TGG | - | chr4_4:59587905-59587924 | Msa0691450:intron | 25.0% |
| !! | GCTGAAATTGATGATTATTT+GGG | - | chr4_4:59587906-59587925 | Msa0691450:intron | 25.0% |
| ! | TATGAAATAAACACCAACTT+CGG | + | chr4_4:59587975-59587994 | None:intergenic | 25.0% |
| ! | TATCATACATTTAAACAAGC+CGG | + | chr4_4:59588142-59588161 | None:intergenic | 25.0% |
| ! | TAAATAAGATAAGGTGCAAT+CGG | + | chr4_4:59588213-59588232 | None:intergenic | 25.0% |
| ! | CATCGCAAATAAATAAGATA+AGG | + | chr4_4:59588222-59588241 | None:intergenic | 25.0% |
| ! | CTTATTTATTTGCGATGAAT+TGG | - | chr4_4:59588225-59588244 | Msa0691450:five_prime_UTR | 25.0% |
| ! | TATTTATTTGCGATGAATTG+GGG | - | chr4_4:59588227-59588246 | Msa0691450:five_prime_UTR | 25.0% |
| !! | GATTTTAGTATTTCTTACCC+AGG | + | chr4_4:59581142-59581161 | None:intergenic | 30.0% |
| ACAAGTATACAAACATGAGT+GGG | + | chr4_4:59581179-59581198 | None:intergenic | 30.0% | |
| AACAAGTATACAAACATGAG+TGG | + | chr4_4:59581180-59581199 | None:intergenic | 30.0% | |
| !! | AGGGTGTTTTTGTCATTTAT+GGG | + | chr4_4:59581316-59581335 | None:intergenic | 30.0% |
| !!! | AAGGGTGTTTTTGTCATTTA+TGG | + | chr4_4:59581317-59581336 | None:intergenic | 30.0% |
| ! | AGAACGATTGCAAAGATTTT+GGG | + | chr4_4:59581364-59581383 | None:intergenic | 30.0% |
| !!! | AAGCAATTTTGAAACAACCA+AGG | - | chr4_4:59581436-59581455 | Msa0691450:three_prime_UTR | 30.0% |
| ! | ATGTTTCTGCAATTCAGATT+AGG | - | chr4_4:59581551-59581570 | Msa0691450:intron | 30.0% |
| ! | AATTGATGATCATGCTGAAT+TGG | + | chr4_4:59581632-59581651 | None:intergenic | 30.0% |
| AGCCATAAACTCTAAATTGA+TGG | + | chr4_4:59581710-59581729 | None:intergenic | 30.0% | |
| ! | AATTTAGAGTTTATGGCTGA+AGG | - | chr4_4:59581712-59581731 | Msa0691450:intron | 30.0% |
| TATATGAAAAGGGCAAATGT+TGG | - | chr4_4:59581763-59581782 | Msa0691450:intron | 30.0% | |
| TGAACTTGGAATTGTAATTC+TGG | + | chr4_4:59581824-59581843 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTCTTGACTAGGGT+TGG | - | chr4_4:59581870-59581889 | Msa0691450:intron | 30.0% |
| CTTCATCAACCAATATAGAT+GGG | + | chr4_4:59582118-59582137 | None:intergenic | 30.0% | |
| ! | CTCTTTTGTCATATGATTTC+AGG | - | chr4_4:59582216-59582235 | Msa0691450:intron | 30.0% |
| CTGTATACAACACCTATATT+TGG | + | chr4_4:59582265-59582284 | None:intergenic | 30.0% | |
| ! | CAAATATAGGTGTTGTATAC+AGG | - | chr4_4:59582263-59582282 | Msa0691450:intron | 30.0% |
| ! | ACTATTATTTCTCTGTACAG+AGG | - | chr4_4:59582334-59582353 | Msa0691450:intron | 30.0% |
| TCTTGAACACAAGATTTGTA+TGG | - | chr4_4:59582403-59582422 | Msa0691450:intron | 30.0% | |
| ! | ACTATTATTTCTCTGTACAG+AGG | - | chr4_4:59582334-59582353 | Msa0691450:intron | 30.0% |
| TAACAGAGAATTCTATCCAA+AGG | - | chr4_4:59582595-59582614 | Msa0691450:intron | 30.0% | |
| CATTCATCAAGTACTTATGA+TGG | + | chr4_4:59582643-59582662 | None:intergenic | 30.0% | |
| CAGTTATGATGTTATCATAG+GGG | + | chr4_4:59582686-59582705 | None:intergenic | 30.0% | |
| TCATAACTGTTTCCTAGATA+TGG | - | chr4_4:59582697-59582716 | Msa0691450:intron | 30.0% | |
| ACATTGTAAACTGTTAGCAT+TGG | - | chr4_4:59582856-59582875 | Msa0691450:intron | 30.0% | |
| ! | AGCATTGGAATAGTGTAAAA+TGG | - | chr4_4:59582871-59582890 | Msa0691450:intron | 30.0% |
| GTCATACACTAAAAGTTCAA+CGG | + | chr4_4:59583917-59583936 | None:intergenic | 30.0% | |
| !!! | ATTTTGTCTTTGTTGTTCAG+TGG | - | chr4_4:59583989-59584008 | Msa0691450:intron | 30.0% |
| GGTAGTGTACTTTATATAGT+CGG | + | chr4_4:59584075-59584094 | None:intergenic | 30.0% | |
| GAGTCATATTGACCAAATAT+TGG | + | chr4_4:59584132-59584151 | None:intergenic | 30.0% | |
| ! | TTGCCTTTTCTGTTATCATT+TGG | - | chr4_4:59584374-59584393 | Msa0691450:intron | 30.0% |
| !!! | TCTATCTTTCCTTTTTTTGG+AGG | + | chr4_4:59584666-59584685 | None:intergenic | 30.0% |
| !!! | CTCTCTATCTTTCCTTTTTT+TGG | + | chr4_4:59584669-59584688 | None:intergenic | 30.0% |
| AAAAAAAAAAAGGACACAGG+TGG | + | chr4_4:59584761-59584780 | None:intergenic | 30.0% | |
| !!! | TTGAATCTTTTTTAGTGAGG+GGG | + | chr4_4:59584807-59584826 | None:intergenic | 30.0% |
| !!! | GTTGAATCTTTTTTAGTGAG+GGG | + | chr4_4:59584808-59584827 | None:intergenic | 30.0% |
| !!! | CTGTTGAATCTTTTTTAGTG+AGG | + | chr4_4:59584810-59584829 | None:intergenic | 30.0% |
| ACAATAGGTTTCATGTTGAT+TGG | + | chr4_4:59584853-59584872 | None:intergenic | 30.0% | |
| CGATTAATGTCTACCAAATT+TGG | + | chr4_4:59584916-59584935 | None:intergenic | 30.0% | |
| CCGATTATCATTAAATGTTG+AGG | - | chr4_4:59584978-59584997 | Msa0691450:intron | 30.0% | |
| GGTTCATTATGAATTCCAAT+AGG | + | chr4_4:59585146-59585165 | None:intergenic | 30.0% | |
| TGCGTGTAAAAATAAGTAAG+AGG | + | chr4_4:59585205-59585224 | None:intergenic | 30.0% | |
| AGGAGGAAAATAGAAGAAAA+AGG | + | chr4_4:59585236-59585255 | None:intergenic | 30.0% | |
| ! | TAATGGACCACAATTATATC+AGG | - | chr4_4:59585346-59585365 | Msa0691450:intron | 30.0% |
| CAAGAAAAATATGAACCTGA+TGG | + | chr4_4:59585686-59585705 | None:intergenic | 30.0% | |
| ! | CATCAGGTTCATATTTTTCT+TGG | - | chr4_4:59585684-59585703 | Msa0691450:intron | 30.0% |
| !! | CAATGTTTTAGGCAAATATG+TGG | - | chr4_4:59585786-59585805 | Msa0691450:intron | 30.0% |
| TAAAGTTTCAACCCACATAA+TGG | + | chr4_4:59585847-59585866 | None:intergenic | 30.0% | |
| !!! | GGAGCAACATTTTGATTAAA+CGG | + | chr4_4:59586167-59586186 | None:intergenic | 30.0% |
| !! | TCAGTGTTTTAAATTGGAGA+AGG | - | chr4_4:59586218-59586237 | Msa0691450:intron | 30.0% |
| AATAGAGGCTAATGTTATCT+AGG | - | chr4_4:59586281-59586300 | Msa0691450:intron | 30.0% | |
| ATAGAGGCTAATGTTATCTA+GGG | - | chr4_4:59586282-59586301 | Msa0691450:intron | 30.0% | |
| CAGACAAGAAAAAAGAAAAG+AGG | + | chr4_4:59586489-59586508 | None:intergenic | 30.0% | |
| !!! | TTATTTTTTCGGTGTTTTCC+AGG | - | chr4_4:59586560-59586579 | Msa0691450:intron | 30.0% |
| ! | GTCTGCCAAAGTATATTTTA+GGG | + | chr4_4:59586666-59586685 | None:intergenic | 30.0% |
| ! | AGTCTGCCAAAGTATATTTT+AGG | + | chr4_4:59586667-59586686 | None:intergenic | 30.0% |
| TATTTGAACCTTGTATCATC+TGG | - | chr4_4:59586725-59586744 | Msa0691450:intron | 30.0% | |
| !! | TAGCTTTTAGGTATTCAGAT+TGG | + | chr4_4:59586797-59586816 | None:intergenic | 30.0% |
| ! | TAAATAAGTTTGAGGCATTC+GGG | - | chr4_4:59586817-59586836 | Msa0691450:intron | 30.0% |
| TTATCTTCATTTGAGTAGCT+AGG | + | chr4_4:59586869-59586888 | None:intergenic | 30.0% | |
| AGCTACTCAAATGAAGATAA+TGG | - | chr4_4:59586869-59586888 | Msa0691450:intron | 30.0% | |
| !!! | CTTGTTTTACATTCGTATCA+TGG | - | chr4_4:59586895-59586914 | Msa0691450:intron | 30.0% |
| !! | TACTCTATTTTAGACAAACC+TGG | - | chr4_4:59587470-59587489 | Msa0691450:intron | 30.0% |
| TGATGAGAAACAAGAACATT+TGG | + | chr4_4:59587541-59587560 | None:intergenic | 30.0% | |
| AATGGAGGCTAATTAAAATC+AGG | - | chr4_4:59587623-59587642 | Msa0691450:intron | 30.0% | |
| GTTTGTCAAACAATGAAATG+TGG | + | chr4_4:59587657-59587676 | None:intergenic | 30.0% | |
| ! | TGCTACTTACAAAATGCATT+GGG | + | chr4_4:59587755-59587774 | None:intergenic | 30.0% |
| ! | TTGCTACTTACAAAATGCAT+TGG | + | chr4_4:59587756-59587775 | None:intergenic | 30.0% |
| ! | CTTTTCTTAATTTTTGCTGG+TGG | - | chr4_4:59587780-59587799 | Msa0691450:intron | 30.0% |
| ! | TTTCTTAATTTTTGCTGGTG+GGG | - | chr4_4:59587782-59587801 | Msa0691450:intron | 30.0% |
| !!! | AAGTTTTTTGTTTTGAACGC+CGG | - | chr4_4:59587837-59587856 | Msa0691450:intron | 30.0% |
| ACAAATTAAGTTACCGAATC+CGG | + | chr4_4:59587859-59587878 | None:intergenic | 30.0% | |
| ATGAAATAAACACCAACTTC+GGG | + | chr4_4:59587974-59587993 | None:intergenic | 30.0% | |
| TATGGTAATTCTGATGACTT+TGG | + | chr4_4:59588088-59588107 | None:intergenic | 30.0% | |
| ATCATACATTTAAACAAGCC+GGG | + | chr4_4:59588141-59588160 | None:intergenic | 30.0% | |
| GAATTGGGGATCTTAAATTA+AGG | - | chr4_4:59588241-59588260 | Msa0691450:five_prime_UTR | 30.0% | |
| ! | GGTGTTGAAATAGAAAGTGT+AGG | + | chr4_4:59581204-59581223 | None:intergenic | 35.0% |
| ATTTCAACACCGAACGAATA+CGG | - | chr4_4:59581213-59581232 | Msa0691450:three_prime_UTR | 35.0% | |
| ACAAAATTCGACTGTACTGT+TGG | + | chr4_4:59581241-59581260 | None:intergenic | 35.0% | |
| ! | TTTGTTTCTCTTTCCAGTTC+AGG | - | chr4_4:59581256-59581275 | Msa0691450:intron | 35.0% |
| GTGTAACCAGAAACATTCAA+AGG | + | chr4_4:59581294-59581313 | None:intergenic | 35.0% | |
| !! | GCAAAGATTTTGGGTGAATT+GGG | + | chr4_4:59581355-59581374 | None:intergenic | 35.0% |
| !! | TGCAAAGATTTTGGGTGAAT+TGG | + | chr4_4:59581356-59581375 | None:intergenic | 35.0% |
| ! | GAGAACGATTGCAAAGATTT+TGG | + | chr4_4:59581365-59581384 | None:intergenic | 35.0% |
| TGTTTCAAAATTGCTTCGAG+AGG | + | chr4_4:59581432-59581451 | None:intergenic | 35.0% | |
| ! | CTTACAACTTTTAGTCCTTC+TGG | - | chr4_4:59581987-59582006 | Msa0691450:intron | 35.0% |
| GAAGAAACTCCCATCTATAT+TGG | - | chr4_4:59582106-59582125 | Msa0691450:intron | 35.0% | |
| GCTTCATCAACCAATATAGA+TGG | + | chr4_4:59582119-59582138 | None:intergenic | 35.0% | |
| ! | CTTCATACTTTGGTAGTTGA+TGG | - | chr4_4:59582363-59582382 | Msa0691450:intron | 35.0% |
| ! | CTTCATACTTTGGTAGTTGA+TGG | - | chr4_4:59582363-59582382 | Msa0691450:intron | 35.0% |
| ATGCCATTGAAGTTTCTGTT+GGG | - | chr4_4:59582509-59582528 | Msa0691450:intron | 35.0% | |
| ! | TATGATGGTTTGTAAACGCA+AGG | + | chr4_4:59582628-59582647 | None:intergenic | 35.0% |
| GTATAGAGTCGAAATAGATG+TGG | - | chr4_4:59582778-59582797 | Msa0691450:CDS | 35.0% | |
| ! | GAAACCATAGTTTTCAGACT+CGG | - | chr4_4:59583126-59583145 | Msa0691450:intron | 35.0% |
| GTTATTTAACCGGACTAACT+CGG | - | chr4_4:59583289-59583308 | Msa0691450:intron | 35.0% | |
| ! | TCAACCATAGTTTTCAGACT+CGG | + | chr4_4:59583856-59583875 | None:intergenic | 35.0% |
| ! | GAACTTTTAGTGTATGACAG+AGG | - | chr4_4:59583919-59583938 | Msa0691450:intron | 35.0% |
| !!! | TGCTTTTTCGAACCAATACT+CGG | + | chr4_4:59584030-59584049 | None:intergenic | 35.0% |
| GAATAGGAAGAACTACATAC+AGG | + | chr4_4:59584188-59584207 | None:intergenic | 35.0% | |
| GCAATCAGAAATGAAGGAAT+AGG | + | chr4_4:59584204-59584223 | None:intergenic | 35.0% | |
| TTCCTTCATTTCTGATTGCT+TGG | - | chr4_4:59584205-59584224 | Msa0691450:intron | 35.0% | |
| TTCCAAGCAATCAGAAATGA+AGG | + | chr4_4:59584210-59584229 | None:intergenic | 35.0% | |
| CTGATTGCTTGGAATGAATT+AGG | - | chr4_4:59584216-59584235 | Msa0691450:intron | 35.0% | |
| ! | ACACATTTCCTTTTCGAACA+TGG | - | chr4_4:59584239-59584258 | Msa0691450:intron | 35.0% |
| ! | CACATTTCCTTTTCGAACAT+GGG | - | chr4_4:59584240-59584259 | Msa0691450:intron | 35.0% |
| ATGATAACAGAAAAGGCAAC+AGG | + | chr4_4:59584373-59584392 | None:intergenic | 35.0% | |
| CTGAGTAAATTCCTGCATAA+CGG | + | chr4_4:59584505-59584524 | None:intergenic | 35.0% | |
| ACGGTCAAAACATTTCTGAA+AGG | + | chr4_4:59584592-59584611 | None:intergenic | 35.0% | |
| ! | TAATGATAATCGGGGTGTTA+TGG | + | chr4_4:59584971-59584990 | None:intergenic | 35.0% |
| ! | AACAAAGTGCCTGAAATTTG+AGG | - | chr4_4:59585021-59585040 | Msa0691450:intron | 35.0% |
| TTCGAAATGCCTCAAATTTC+AGG | + | chr4_4:59585033-59585052 | None:intergenic | 35.0% | |
| ! | CATGAGTTAGTTTCATGCAA+CGG | - | chr4_4:59585085-59585104 | Msa0691450:intron | 35.0% |
| TGCATGCAGATTAGATTTAG+AGG | + | chr4_4:59585167-59585186 | None:intergenic | 35.0% | |
| GACCACAATTATATCAGGTA+TGG | - | chr4_4:59585351-59585370 | Msa0691450:CDS | 35.0% | |
| TGCCATACCTGATATAATTG+TGG | + | chr4_4:59585356-59585375 | None:intergenic | 35.0% | |
| TCTAGACAGTATTCACTCAT+TGG | - | chr4_4:59585395-59585414 | Msa0691450:intron | 35.0% | |
| TGTGTTTGATGAGTTCATAC+TGG | - | chr4_4:59585550-59585569 | Msa0691450:intron | 35.0% | |
| !! | ACTGCAGTTTTTAGAGAAAG+AGG | - | chr4_4:59585610-59585629 | Msa0691450:intron | 35.0% |
| GAGAAAGAGGAGAAAATTGA+AGG | - | chr4_4:59585623-59585642 | Msa0691450:intron | 35.0% | |
| !! | GTGCAATTTGTATTTGCTGT+AGG | - | chr4_4:59585655-59585674 | Msa0691450:intron | 35.0% |
| !! | CAATTTGTATTTGCTGTAGG+TGG | - | chr4_4:59585658-59585677 | Msa0691450:intron | 35.0% |
| CTAAGACATTTCTTGAGAAG+AGG | - | chr4_4:59585741-59585760 | Msa0691450:intron | 35.0% | |
| TTCCTTGATTGTCCAATTCT+AGG | - | chr4_4:59585958-59585977 | Msa0691450:intron | 35.0% | |
| TACCTAGAATTGGACAATCA+AGG | + | chr4_4:59585963-59585982 | None:intergenic | 35.0% | |
| ATCATCAAGCTCCATATCAT+CGG | + | chr4_4:59585988-59586007 | None:intergenic | 35.0% | |
| CAATATTGACACTCAAGGAA+GGG | - | chr4_4:59586021-59586040 | Msa0691450:intron | 35.0% | |
| ! | CATTCTTAGAGTTGATTAGG+AGG | - | chr4_4:59586102-59586121 | Msa0691450:intron | 35.0% |
| ! | AAGGAAAGTTCGTCTAAGAT+TGG | - | chr4_4:59586237-59586256 | Msa0691450:intron | 35.0% |
| GTGATCTTGACATTTACCAA+AGG | - | chr4_4:59586327-59586346 | Msa0691450:intron | 35.0% | |
| ! | TAAGCTGACTTTATGTTAGC+AGG | - | chr4_4:59586371-59586390 | Msa0691450:intron | 35.0% |
| ! | AAGCTGACTTTATGTTAGCA+GGG | - | chr4_4:59586372-59586391 | Msa0691450:intron | 35.0% |
| !! | AAGGGATTAGTTTCAAAGAC+TGG | + | chr4_4:59586535-59586554 | None:intergenic | 35.0% |
| AACATTGAAATCGGCATCAT+TGG | - | chr4_4:59586607-59586626 | Msa0691450:intron | 35.0% | |
| GAAAGAAACCAGATGATACA+AGG | + | chr4_4:59586736-59586755 | None:intergenic | 35.0% | |
| GTGAAAACCACAACTGAATA+TGG | + | chr4_4:59586943-59586962 | None:intergenic | 35.0% | |
| ! | TCAAGTCAAGGTATCTAGAA+GGG | + | chr4_4:59587186-59587205 | None:intergenic | 35.0% |
| ! | AATTCCCACTTGCCTAATTT+TGG | + | chr4_4:59587350-59587369 | None:intergenic | 35.0% |
| AAATTAGGCAAGTGGGAATT+AGG | - | chr4_4:59587350-59587369 | Msa0691450:CDS | 35.0% | |
| AATTAGGCAAGTGGGAATTA+GGG | - | chr4_4:59587351-59587370 | Msa0691450:CDS | 35.0% | |
| TGATCAATGAAGACTTGTGA+TGG | - | chr4_4:59588024-59588043 | Msa0691450:five_prime_UTR | 35.0% | |
| AAAAACAAGCTGGGTTTGTA+TGG | + | chr4_4:59588106-59588125 | None:intergenic | 35.0% | |
| !!! | ACAAACCCAGCTTGTTTTTT+TGG | - | chr4_4:59588107-59588126 | Msa0691450:five_prime_UTR | 35.0% |
| TTGTGCCAAAAAAACAAGCT+GGG | + | chr4_4:59588115-59588134 | None:intergenic | 35.0% | |
| TTTGTGCCAAAAAAACAAGC+TGG | + | chr4_4:59588116-59588135 | None:intergenic | 35.0% | |
| !!! | GTTTTTTTGGCACAAAAACC+CGG | - | chr4_4:59588120-59588139 | Msa0691450:five_prime_UTR | 35.0% |
| AGGTGCAATCGGATAATAAA+AGG | + | chr4_4:59588202-59588221 | None:intergenic | 35.0% | |
| AGGAGATGACAATGAAGGAA+GGG | + | chr4_4:59581395-59581414 | None:intergenic | 40.0% | |
| AAACGCAAAACACACAGCAA+TGG | + | chr4_4:59581506-59581525 | None:intergenic | 40.0% | |
| TTATGGCTGAAGGTTTAGAG+TGG | - | chr4_4:59581722-59581741 | Msa0691450:intron | 40.0% | |
| ATTTGAACAAGCTTGCCAGA+AGG | + | chr4_4:59582005-59582024 | None:intergenic | 40.0% | |
| GATGCCATTGAAGTTTCTGT+TGG | - | chr4_4:59582508-59582527 | Msa0691450:intron | 40.0% | |
| GTTCCCAACAGAAACTTCAA+TGG | + | chr4_4:59582515-59582534 | None:intergenic | 40.0% | |
| ! | ATGGTTTGTAAACGCAAGGA+GGG | + | chr4_4:59582624-59582643 | None:intergenic | 40.0% |
| ATAGGGGAGAATCAGTTTAG+GGG | + | chr4_4:59582670-59582689 | None:intergenic | 40.0% | |
| CATAGGGGAGAATCAGTTTA+GGG | + | chr4_4:59582671-59582690 | None:intergenic | 40.0% | |
| TCATAGGGGAGAATCAGTTT+AGG | + | chr4_4:59582672-59582691 | None:intergenic | 40.0% | |
| GGAAGTGACTCAACTTAGTT+GGG | - | chr4_4:59582729-59582748 | Msa0691450:intron | 40.0% | |
| CATATATGCATGTGAGCATG+AGG | - | chr4_4:59582931-59582950 | Msa0691450:intron | 40.0% | |
| !! | GATGACTCGGTTAGATAACT+CGG | - | chr4_4:59583245-59583264 | Msa0691450:intron | 40.0% |
| CTCAATCAATCTTGACTCCT+TGG | + | chr4_4:59583597-59583616 | None:intergenic | 40.0% | |
| TCAACGGCAATGGAAAAAGT+AGG | + | chr4_4:59583901-59583920 | None:intergenic | 40.0% | |
| CACTAAAAGTTCAACGGCAA+TGG | + | chr4_4:59583911-59583930 | None:intergenic | 40.0% | |
| !! | TCTTTGTTGTTCAGTGGCAT+GGG | - | chr4_4:59583995-59584014 | Msa0691450:intron | 40.0% |
| GGTTCGAAAAAGCAGAAAAC+AGG | - | chr4_4:59584036-59584055 | Msa0691450:intron | 40.0% | |
| CTTCCTGTTCTGCCAATATT+TGG | - | chr4_4:59584117-59584136 | Msa0691450:intron | 40.0% | |
| TGACCAAATATTGGCAGAAC+AGG | + | chr4_4:59584123-59584142 | None:intergenic | 40.0% | |
| CTAAGATCCCATGTTCGAAA+AGG | + | chr4_4:59584250-59584269 | None:intergenic | 40.0% | |
| CACTCAGAATTCATCTCACA+AGG | + | chr4_4:59584288-59584307 | None:intergenic | 40.0% | |
| GTGAGATGAATTCTGAGTGT+TGG | - | chr4_4:59584289-59584308 | Msa0691450:intron | 40.0% | |
| ATGCAGGAATTTACTCAGTC+TGG | - | chr4_4:59584507-59584526 | Msa0691450:intron | 40.0% | |
| TGCAGGAATTTACTCAGTCT+GGG | - | chr4_4:59584508-59584527 | Msa0691450:intron | 40.0% | |
| TATGCCACTCCTCCAAAAAA+AGG | - | chr4_4:59584654-59584673 | Msa0691450:intron | 40.0% | |
| !!! | CTTTCCTTTTTTTGGAGGAG+TGG | + | chr4_4:59584661-59584680 | None:intergenic | 40.0% |
| !! | CCAAAAACTCAAAGTTGGTG+AGG | + | chr4_4:59584719-59584738 | None:intergenic | 40.0% |
| !! | CCTCACCAACTTTGAGTTTT+TGG | - | chr4_4:59584716-59584735 | Msa0691450:intron | 40.0% |
| !! | TTTTTAGTGAGGGGGTGATA+AGG | + | chr4_4:59584799-59584818 | None:intergenic | 40.0% |
| ! | GTTAGTTTCATGCAACGGTT+CGG | - | chr4_4:59585090-59585109 | Msa0691450:intron | 40.0% |
| ! | GTTGCTGGGTTTGATGATAA+TGG | - | chr4_4:59585329-59585348 | Msa0691450:intron | 40.0% |
| TTCTTGGAAAGCTTCTGCTA+TGG | - | chr4_4:59585700-59585719 | Msa0691450:intron | 40.0% | |
| TCTTGGAAAGCTTCTGCTAT+GGG | - | chr4_4:59585701-59585720 | Msa0691450:intron | 40.0% | |
| ATCATCGGTGTACCTAGAAT+TGG | + | chr4_4:59585973-59585992 | None:intergenic | 40.0% | |
| TTCTAGGTACACCGATGATA+TGG | - | chr4_4:59585974-59585993 | Msa0691450:intron | 40.0% | |
| TGAGTGTCAATATTGCTGTG+TGG | + | chr4_4:59586016-59586035 | None:intergenic | 40.0% | |
| CACAGCAATATTGACACTCA+AGG | - | chr4_4:59586016-59586035 | Msa0691450:intron | 40.0% | |
| GCAATATTGACACTCAAGGA+AGG | - | chr4_4:59586020-59586039 | Msa0691450:intron | 40.0% | |
| ATCAAAATGTTGCTCCCTCT+CGG | - | chr4_4:59586171-59586190 | Msa0691450:intron | 40.0% | |
| CTATCATACACTATCCGAGA+GGG | + | chr4_4:59586188-59586207 | None:intergenic | 40.0% | |
| !! | TTCGTCTAAGATTGGCTTCT+TGG | - | chr4_4:59586245-59586264 | Msa0691450:intron | 40.0% |
| !! | ATTTTAGAGGGACAAGCCTT+TGG | + | chr4_4:59586346-59586365 | None:intergenic | 40.0% |
| TTGGTGCAGACAAAAAGTTC+AGG | - | chr4_4:59586626-59586645 | Msa0691450:intron | 40.0% | |
| CAACTGAATATGGTCTGACT+TGG | + | chr4_4:59586933-59586952 | None:intergenic | 40.0% | |
| AGTCAGACCATATTCAGTTG+TGG | - | chr4_4:59586933-59586952 | Msa0691450:intron | 40.0% | |
| TGGCAACAATAGTAGACTGT+CGG | + | chr4_4:59586999-59587018 | None:intergenic | 40.0% | |
| GCAAGTGGAGGAATATTATG+TGG | + | chr4_4:59587019-59587038 | None:intergenic | 40.0% | |
| ! | GTCAAGTCAAGGTATCTAGA+AGG | + | chr4_4:59587187-59587206 | None:intergenic | 40.0% |
| CAACAGTAGTAGTCAAGTCA+AGG | + | chr4_4:59587198-59587217 | None:intergenic | 40.0% | |
| !! | AATGACTGTAGAGAGGTGTT+TGG | + | chr4_4:59587230-59587249 | None:intergenic | 40.0% |
| CGGATTTAATGACTGTAGAG+AGG | + | chr4_4:59587237-59587256 | None:intergenic | 40.0% | |
| CACTTGTGACCACCAAAATT+AGG | - | chr4_4:59587335-59587354 | Msa0691450:CDS | 40.0% | |
| ACCACCAAAATTAGGCAAGT+GGG | - | chr4_4:59587343-59587362 | Msa0691450:CDS | 40.0% | |
| GGGAAGTTATCCATTTGCAT+TGG | + | chr4_4:59587735-59587754 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTGAACGCCGGATT+CGG | - | chr4_4:59587843-59587862 | Msa0691450:intron | 40.0% |
| !! | CTGTTGGTTCCGTATTCGTT+CGG | + | chr4_4:59581225-59581244 | None:intergenic | 45.0% |
| ! | GAAAATAGTGGGACCTGAAC+TGG | + | chr4_4:59581272-59581291 | None:intergenic | 45.0% |
| TGACAATGAAGGAAGGGTTC+AGG | + | chr4_4:59581389-59581408 | None:intergenic | 45.0% | |
| GAGGAGATGACAATGAAGGA+AGG | + | chr4_4:59581396-59581415 | None:intergenic | 45.0% | |
| GGAAGAGGAGATGACAATGA+AGG | + | chr4_4:59581400-59581419 | None:intergenic | 45.0% | |
| !!! | GAGAGGAACTGTTTTGGAAG+AGG | + | chr4_4:59581415-59581434 | None:intergenic | 45.0% |
| ! | TGCTTCGAGAGGAACTGTTT+TGG | + | chr4_4:59581421-59581440 | None:intergenic | 45.0% |
| ! | GCTGAAGGTTTAGAGTGGAA+GGG | - | chr4_4:59581727-59581746 | Msa0691450:intron | 45.0% |
| AGTTTGTCCAGAACCAACAG+CGG | + | chr4_4:59582042-59582061 | None:intergenic | 45.0% | |
| !! | GGTTCTGGACAAACTTCTCT+CGG | - | chr4_4:59582047-59582066 | Msa0691450:intron | 45.0% |
| CTCGGTATCAAAGCTGCAAA+TGG | - | chr4_4:59582065-59582084 | Msa0691450:intron | 45.0% | |
| GAGGTAGCTGCTTCATACTT+TGG | - | chr4_4:59582353-59582372 | Msa0691450:intron | 45.0% | |
| GAGGTAGCTGCTTCATACTT+TGG | - | chr4_4:59582353-59582372 | Msa0691450:intron | 45.0% | |
| ! | GATGGTTTGTAAACGCAAGG+AGG | + | chr4_4:59582625-59582644 | None:intergenic | 45.0% |
| TTCCTAGATATGGCAACCTG+AGG | - | chr4_4:59582707-59582726 | Msa0691450:intron | 45.0% | |
| TCCTAGATATGGCAACCTGA+GGG | - | chr4_4:59582708-59582727 | Msa0691450:intron | 45.0% | |
| ! | TAAGTTGAGTCACTTCCCTC+AGG | + | chr4_4:59582726-59582745 | None:intergenic | 45.0% |
| GGGAAGTGACTCAACTTAGT+TGG | - | chr4_4:59582728-59582747 | Msa0691450:intron | 45.0% | |
| ATATGCATGTGAGCATGAGG+TGG | - | chr4_4:59582934-59582953 | Msa0691450:intron | 45.0% | |
| ! | CATAGTTTTCAGACTCGGCT+CGG | - | chr4_4:59583131-59583150 | Msa0691450:intron | 45.0% |
| ATGACTGAATCGGAACCACT+CGG | - | chr4_4:59583223-59583242 | Msa0691450:intron | 45.0% | |
| CGATTCAATCCGAGTTAGTC+CGG | + | chr4_4:59583301-59583320 | None:intergenic | 45.0% | |
| CGGACTAACTCGGATTGAAT+CGG | - | chr4_4:59583299-59583318 | Msa0691450:intron | 45.0% | |
| CGGTCAAAACCGGTAAAAAC+CGG | + | chr4_4:59583736-59583755 | None:intergenic | 45.0% | |
| !!! | CGGTTTTTACCGGTTTTGAC+CGG | - | chr4_4:59583734-59583753 | Msa0691450:intron | 45.0% |
| !!! | GGTTTTTACCGGTTTTGACC+GGG | - | chr4_4:59583735-59583754 | Msa0691450:intron | 45.0% |
| GTTTGACCGAGTTAACTGCA+TGG | - | chr4_4:59583757-59583776 | Msa0691450:intron | 45.0% | |
| TGCATGGCCGATCTAAATGT+CGG | - | chr4_4:59583773-59583792 | Msa0691450:intron | 45.0% | |
| GTTCGAGCCGACATTTAGAT+CGG | + | chr4_4:59583783-59583802 | None:intergenic | 45.0% | |
| !! | ATCTAAATGTCGGCTCGAAC+CGG | - | chr4_4:59583783-59583802 | Msa0691450:intron | 45.0% |
| ! | CATAGTTTTCAGACTCGGCT+CGG | + | chr4_4:59583131-59583150 | None:intergenic | 45.0% |
| !! | GTCTTTGTTGTTCAGTGGCA+TGG | - | chr4_4:59583994-59584013 | Msa0691450:intron | 45.0% |
| CGAACCAATACTCGGAAATC+AGG | + | chr4_4:59584022-59584041 | None:intergenic | 45.0% | |
| ! | ACAAGTTGAGTGACAGGGAA+TGG | + | chr4_4:59584468-59584487 | None:intergenic | 45.0% |
| TCCCTGTCACTCAACTTGTA+AGG | - | chr4_4:59584469-59584488 | Msa0691450:intron | 45.0% | |
| ! | CCCTTACAAGTTGAGTGACA+GGG | + | chr4_4:59584473-59584492 | None:intergenic | 45.0% |
| CCCTGTCACTCAACTTGTAA+GGG | - | chr4_4:59584470-59584489 | Msa0691450:intron | 45.0% | |
| ! | TCCCTTACAAGTTGAGTGAC+AGG | + | chr4_4:59584474-59584493 | None:intergenic | 45.0% |
| CTGCATGCAGTGAACTTAGT+TGG | - | chr4_4:59585178-59585197 | Msa0691450:intron | 45.0% | |
| !! | TTTGTCCTGATAGTGGTGTC+CGG | - | chr4_4:59585285-59585304 | Msa0691450:intron | 45.0% |
| ACAAGCAGAGACACTCCAAA+TGG | + | chr4_4:59585311-59585330 | None:intergenic | 45.0% | |
| CCAATGAGCGAATACTGTCT+TGG | + | chr4_4:59585452-59585471 | None:intergenic | 45.0% | |
| CCAAGACAGTATTCGCTCAT+TGG | - | chr4_4:59585449-59585468 | Msa0691450:intron | 45.0% | |
| CCAATGAGCGAATACTGTCT+TGG | + | chr4_4:59585452-59585471 | None:intergenic | 45.0% | |
| CCAAGACAGTATTCGCTCAT+TGG | - | chr4_4:59585449-59585468 | Msa0691450:intron | 45.0% | |
| CTTGGAAAGCTTCTGCTATG+GGG | - | chr4_4:59585702-59585721 | Msa0691450:intron | 45.0% | |
| !! | AACCCACATAATGGACACAG+CGG | + | chr4_4:59585838-59585857 | None:intergenic | 45.0% |
| ATTGACACTCAAGGAAGGGT+AGG | - | chr4_4:59586025-59586044 | Msa0691450:intron | 45.0% | |
| GCTATCATACACTATCCGAG+AGG | + | chr4_4:59586189-59586208 | None:intergenic | 45.0% | |
| !! | GGGCTTCAAGCTTGTTAGAT+TGG | - | chr4_4:59586392-59586411 | Msa0691450:intron | 45.0% |
| !!! | TTCGGTGTTTTCCAGGTTTG+AGG | - | chr4_4:59586567-59586586 | Msa0691450:intron | 45.0% |
| !! | TCGGTGTTTTCCAGGTTTGA+GGG | - | chr4_4:59586568-59586587 | Msa0691450:intron | 45.0% |
| GGCAACAATAGTAGACTGTC+GGG | + | chr4_4:59586998-59587017 | None:intergenic | 45.0% | |
| AGTATGTCACATGGTGACAG+TGG | + | chr4_4:59587054-59587073 | None:intergenic | 45.0% | |
| !! | AGATGGAGGGGTGTTACAAT+GGG | + | chr4_4:59587102-59587121 | None:intergenic | 45.0% |
| !! | AAGATGGAGGGGTGTTACAA+TGG | + | chr4_4:59587103-59587122 | None:intergenic | 45.0% |
| ! | AAGGTATCTAGAAGGGCAGT+CGG | + | chr4_4:59587179-59587198 | None:intergenic | 45.0% |
| GACCACCAAAATTAGGCAAG+TGG | - | chr4_4:59587342-59587361 | Msa0691450:CDS | 45.0% | |
| ! | TCCCACTTGCCTAATTTTGG+TGG | + | chr4_4:59587347-59587366 | None:intergenic | 45.0% |
| ! | CTTAATTTTTGCTGGTGGGG+TGG | - | chr4_4:59587785-59587804 | Msa0691450:intron | 45.0% |
| CAACTTCGGGAACATAAGGA+TGG | + | chr4_4:59587961-59587980 | None:intergenic | 45.0% | |
| CATCCTTATGTTCCCGAAGT+TGG | - | chr4_4:59587959-59587978 | Msa0691450:five_prime_UTR | 45.0% | |
| ACACCAACTTCGGGAACATA+AGG | + | chr4_4:59587965-59587984 | None:intergenic | 45.0% | |
| ATGAAGACTTGTGATGGCAC+TGG | - | chr4_4:59588030-59588049 | Msa0691450:five_prime_UTR | 45.0% | |
| ! | GGCTGAAGGTTTAGAGTGGA+AGG | - | chr4_4:59581726-59581745 | Msa0691450:intron | 50.0% |
| GAGCATGCTTTAACCGCTGT+TGG | - | chr4_4:59582026-59582045 | Msa0691450:intron | 50.0% | |
| !! | GCTTTAACCGCTGTTGGTTC+TGG | - | chr4_4:59582032-59582051 | Msa0691450:intron | 50.0% |
| AACGCAAGGAGGGAAACCTT+TGG | + | chr4_4:59582614-59582633 | None:intergenic | 50.0% | |
| ! | TCCCTCAGGTTGCCATATCT+AGG | + | chr4_4:59582712-59582731 | None:intergenic | 50.0% |
| CGAGCCGAGTCTGAAAACTA+TGG | + | chr4_4:59583849-59583868 | None:intergenic | 50.0% | |
| GTCGAACCGCATGACTGAAT+CGG | - | chr4_4:59583213-59583232 | Msa0691450:intron | 50.0% | |
| GTGGTTCCGATTCAGTCATG+CGG | + | chr4_4:59583222-59583241 | None:intergenic | 50.0% | |
| ATCTAACCGAGTCATCCGAG+TGG | + | chr4_4:59583241-59583260 | None:intergenic | 50.0% | |
| CTCGGATTGAATCGGTGACT+CGG | - | chr4_4:59583307-59583326 | Msa0691450:intron | 50.0% | |
| ACCGGTAAAAACCGGTGACT+CGG | + | chr4_4:59583728-59583747 | None:intergenic | 50.0% | |
| GCAGTTAACTCGGTCAAACC+CGG | + | chr4_4:59583756-59583775 | None:intergenic | 50.0% | |
| GATCGGCCATGCAGTTAACT+CGG | + | chr4_4:59583766-59583785 | None:intergenic | 50.0% | |
| CGAGCCGAGTCTGAAAACTA+TGG | - | chr4_4:59583849-59583868 | Msa0691450:intron | 50.0% | |
| GGGTCCTGATTTCCGAGTAT+TGG | - | chr4_4:59584015-59584034 | Msa0691450:intron | 50.0% | |
| ! | GAGTGTCTCTGCTTGTTGCT+GGG | - | chr4_4:59585315-59585334 | Msa0691450:intron | 50.0% |
| TTGCTGTAGGTGGATCCATC+AGG | - | chr4_4:59585668-59585687 | Msa0691450:intron | 50.0% | |
| TGTCCGCTGTGTCCATTATG+TGG | - | chr4_4:59585832-59585851 | Msa0691450:intron | 50.0% | |
| GTCCGCTGTGTCCATTATGT+GGG | - | chr4_4:59585833-59585852 | Msa0691450:intron | 50.0% | |
| TGAGATCTGTCCCTCAAACC+TGG | + | chr4_4:59586581-59586600 | None:intergenic | 50.0% | |
| ! | AGTTTGAGGCATTCGGGTAG+CGG | - | chr4_4:59586823-59586842 | Msa0691450:intron | 50.0% |
| ! | AGGGTGTTTAGTGCAAGTGG+AGG | + | chr4_4:59587031-59587050 | None:intergenic | 50.0% |
| !! | TGGAGGGTGTTTAGTGCAAG+TGG | + | chr4_4:59587034-59587053 | None:intergenic | 50.0% |
| TGTCACATGGTGACAGTGGA+GGG | + | chr4_4:59587050-59587069 | None:intergenic | 50.0% | |
| ATGTCACATGGTGACAGTGG+AGG | + | chr4_4:59587051-59587070 | None:intergenic | 50.0% | |
| CGACGATGGAGTATGTCACA+TGG | + | chr4_4:59587063-59587082 | None:intergenic | 50.0% | |
| !! | ATGGAGGGGTGTTACAATGG+GGG | + | chr4_4:59587100-59587119 | None:intergenic | 50.0% |
| !! | GATGGAGGGGTGTTACAATG+GGG | + | chr4_4:59587101-59587120 | None:intergenic | 50.0% |
| TTGACAGCAGAGAGAGTGGT+GGG | + | chr4_4:59587128-59587147 | None:intergenic | 50.0% | |
| GTACTTGACAGCAGAGAGAG+TGG | + | chr4_4:59587132-59587151 | None:intergenic | 50.0% | |
| ! | AGTGTTGAGCAAGGATGGAG+AGG | + | chr4_4:59587154-59587173 | None:intergenic | 50.0% |
| !! | AGAGAGGTGTTTGGTGGTGA+TGG | + | chr4_4:59587221-59587240 | None:intergenic | 50.0% |
| !! | GACTGTAGAGAGGTGTTTGG+TGG | + | chr4_4:59587227-59587246 | None:intergenic | 50.0% |
| CCAGCAGCAATGATTGTGGA+CGG | + | chr4_4:59587257-59587276 | None:intergenic | 50.0% | |
| GAGTGACGACAATGGAAAGG+TGG | + | chr4_4:59587291-59587310 | None:intergenic | 50.0% | |
| CACGAGTGACGACAATGGAA+AGG | + | chr4_4:59587294-59587313 | None:intergenic | 50.0% | |
| !! | TTTTGGTGGTCACAAGTGCC+TGG | + | chr4_4:59587333-59587352 | None:intergenic | 50.0% |
| TAGGCAAGTGGGAATTAGGG+TGG | - | chr4_4:59587354-59587373 | Msa0691450:CDS | 50.0% | |
| GTGGGAATTAGGGTGGAAAG+AGG | - | chr4_4:59587361-59587380 | Msa0691450:CDS | 50.0% | |
| GTACTGGGTCACTGGGTCAA+TGG | - | chr4_4:59583171-59583190 | Msa0691450:intron | 55.0% | |
| TGGGTCAATGGTCGAACCAC+TGG | - | chr4_4:59583183-59583202 | Msa0691450:intron | 55.0% | |
| GGGTCAATGGTCGAACCACT+GGG | - | chr4_4:59583184-59583203 | Msa0691450:intron | 55.0% | |
| TCGGAACCACTCGGATGACT+CGG | - | chr4_4:59583232-59583251 | Msa0691450:intron | 55.0% | |
| AACCGGTCTGACCCATGACT+CGG | - | chr4_4:59583702-59583721 | Msa0691450:CDS | 55.0% | |
| !!! | GCCGAGTCACCGGTTTTTAC+CGG | - | chr4_4:59583724-59583743 | Msa0691450:intron | 55.0% |
| CGGTCAAACCCGGTCAAAAC+CGG | + | chr4_4:59583746-59583765 | None:intergenic | 55.0% | |
| !!! | TTTTCAGACTCGGCTCGGAC+CGG | + | chr4_4:59583846-59583865 | None:intergenic | 55.0% |
| GGAAGTTGCTGCCGTTATGC+AGG | - | chr4_4:59584491-59584510 | Msa0691450:intron | 55.0% | |
| AATGGCCGGACACCACTATC+AGG | + | chr4_4:59585293-59585312 | None:intergenic | 55.0% | |
| ! | GATAGTGGTGTCCGGCCATT+TGG | - | chr4_4:59585293-59585312 | Msa0691450:intron | 55.0% |
| GCAGAGACACTCCAAATGGC+CGG | + | chr4_4:59585307-59585326 | None:intergenic | 55.0% | |
| ! | GGAGTGTCTCTGCTTGTTGC+TGG | - | chr4_4:59585314-59585333 | Msa0691450:intron | 55.0% |
| ! | GTTTGAGGCATTCGGGTAGC+GGG | - | chr4_4:59586824-59586843 | Msa0691450:intron | 55.0% |
| ATACCACACGCTGACGACGA+TGG | + | chr4_4:59587077-59587096 | None:intergenic | 55.0% | |
| ! | AGTGGTGGGAGAAGATGGAG+GGG | + | chr4_4:59587114-59587133 | None:intergenic | 55.0% |
| ! | GAGTGGTGGGAGAAGATGGA+GGG | + | chr4_4:59587115-59587134 | None:intergenic | 55.0% |
| ! | AGAGTGGTGGGAGAAGATGG+AGG | + | chr4_4:59587116-59587135 | None:intergenic | 55.0% |
| ! | GAGAGAGTGGTGGGAGAAGA+TGG | + | chr4_4:59587119-59587138 | None:intergenic | 55.0% |
| CTTGACAGCAGAGAGAGTGG+TGG | + | chr4_4:59587129-59587148 | None:intergenic | 55.0% | |
| !! | CGGAGAGTGTTGAGCAAGGA+TGG | + | chr4_4:59587159-59587178 | None:intergenic | 55.0% |
| !! | CAGTCGGAGAGTGTTGAGCA+AGG | + | chr4_4:59587163-59587182 | None:intergenic | 55.0% |
| CCGTCCACAATCATTGCTGC+TGG | - | chr4_4:59587254-59587273 | Msa0691450:intron | 55.0% | |
| TGCGCCAGCAGCAATGATTG+TGG | + | chr4_4:59587261-59587280 | None:intergenic | 55.0% | |
| AGGGTCACGAGTGACGACAA+TGG | + | chr4_4:59587299-59587318 | None:intergenic | 55.0% | |
| TCACAAGTGCCTGGTGGCAA+TGG | + | chr4_4:59587324-59587343 | None:intergenic | 55.0% | |
| ! | TTTTGCTGGTGGGGTGGCAT+TGG | - | chr4_4:59587791-59587810 | Msa0691450:intron | 55.0% |
| TTTGCTGGTGGGGTGGCATT+GGG | - | chr4_4:59587792-59587811 | Msa0691450:intron | 55.0% | |
| !! | ACTCGGCTCGGTCATCGACT+CGG | - | chr4_4:59583143-59583162 | Msa0691450:intron | 60.0% |
| !! | ATCGACTCGGCGAGGGTACT+GGG | - | chr4_4:59583156-59583175 | Msa0691450:intron | 60.0% |
| TGGTCGAACCACTGGGTCGT+TGG | - | chr4_4:59583191-59583210 | Msa0691450:intron | 60.0% | |
| !! | AGGCATTCGGGTAGCGGGTT+GGG | - | chr4_4:59586829-59586848 | Msa0691450:intron | 60.0% |
| ACTCCATCGTCGTCAGCGTG+TGG | - | chr4_4:59587071-59587090 | Msa0691450:intron | 60.0% | |
| TGACCCTCACCATTGCCACC+AGG | - | chr4_4:59587312-59587331 | Msa0691450:CDS | 60.0% | |
| GTGCCTGGTGGCAATGGTGA+GGG | + | chr4_4:59587318-59587337 | None:intergenic | 60.0% | |
| AGTGCCTGGTGGCAATGGTG+AGG | + | chr4_4:59587319-59587338 | None:intergenic | 60.0% | |
| TGGTGGTCACAAGTGCCTGG+TGG | + | chr4_4:59587330-59587349 | None:intergenic | 60.0% | |
| AGGGTGGAAAGAGGAGACGC+AGG | - | chr4_4:59587370-59587389 | Msa0691450:CDS | 60.0% | |
| TTGCTGGTGGGGTGGCATTG+GGG | - | chr4_4:59587793-59587812 | Msa0691450:intron | 60.0% | |
| !! | CTCGGTCATCGACTCGGCGA+GGG | - | chr4_4:59583149-59583168 | Msa0691450:intron | 65.0% |
| !! | CATCGACTCGGCGAGGGTAC+TGG | - | chr4_4:59583155-59583174 | Msa0691450:intron | 65.0% |
| !! | GGCGAGGGTACTGGGTCACT+GGG | - | chr4_4:59583164-59583183 | Msa0691450:intron | 65.0% |
| CGGTTCGACCAACGACCCAG+TGG | + | chr4_4:59583202-59583221 | None:intergenic | 65.0% | |
| GGCCGAGTCATGGGTCAGAC+CGG | + | chr4_4:59583707-59583726 | None:intergenic | 65.0% | |
| ! | CGGTGACTCGGCCGAGTCAT+GGG | + | chr4_4:59583716-59583735 | None:intergenic | 65.0% |
| ! | CCATGACTCGGCCGAGTCAC+CGG | - | chr4_4:59583714-59583733 | Msa0691450:CDS | 65.0% |
| ! | GCTCGAACCGGCTTACCCAC+CGG | - | chr4_4:59583795-59583814 | Msa0691450:intron | 65.0% |
| CCGTGAACCGGTGGGTAAGC+CGG | + | chr4_4:59583805-59583824 | None:intergenic | 65.0% | |
| !! | CCGGCTTACCCACCGGTTCA+CGG | - | chr4_4:59583802-59583821 | Msa0691450:intron | 65.0% |
| !! | GAGGCATTCGGGTAGCGGGT+TGG | - | chr4_4:59586828-59586847 | Msa0691450:intron | 65.0% |
| !! | TCGGGTAGCGGGTTGGGACT+AGG | - | chr4_4:59586835-59586854 | Msa0691450:intron | 65.0% |
| !! | GCTCGGTCATCGACTCGGCG+AGG | - | chr4_4:59583148-59583167 | Msa0691450:intron | 70.0% |
| !! | CGGCGAGGGTACTGGGTCAC+TGG | - | chr4_4:59583163-59583182 | Msa0691450:intron | 70.0% |
| ! | CCGGTGACTCGGCCGAGTCA+TGG | + | chr4_4:59583717-59583736 | None:intergenic | 70.0% |
| CGGTCGGACCGTGAACCGGT+GGG | + | chr4_4:59583813-59583832 | None:intergenic | 70.0% | |
| !! | CCACCGGTTCACGGTCCGAC+CGG | - | chr4_4:59583811-59583830 | Msa0691450:intron | 70.0% |
| GGACCGGTCGGACCGTGAAC+CGG | + | chr4_4:59583817-59583836 | None:intergenic | 70.0% | |
| CCGGTCGGACCGTGAACCGG+TGG | + | chr4_4:59583814-59583833 | None:intergenic | 75.0% | |
| CACGGTCCGACCGGTCCGAC+CGG | - | chr4_4:59583820-59583839 | Msa0691450:intron | 75.0% | |
| !! | CAGACTCGGCTCGGACCGGC+CGG | + | chr4_4:59583842-59583861 | None:intergenic | 75.0% |
| ! | GTCCGACCGGTCCGACCGGC+CGG | - | chr4_4:59583824-59583843 | Msa0691450:intron | 80.0% |
| ! | GACCGGCCGGTCGGACCGGT+CGG | + | chr4_4:59583829-59583848 | None:intergenic | 80.0% |
| ! | CTCGGACCGGCCGGTCGGAC+CGG | + | chr4_4:59583833-59583852 | None:intergenic | 80.0% |
| !!! | CTCGGCTCGGACCGGCCGGT+CGG | + | chr4_4:59583838-59583857 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 59581135 | 59588277 | 59581135 | ID=Msa0691450;Name=Msa0691450 |
| chr4_4 | mRNA | 59581135 | 59588277 | 59581135 | ID=Msa0691450-mRNA-1;Parent=Msa0691450;Name=Msa0691450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=343|0.9|0.90|1|0.7|0.63|11|308|239 |
| chr4_4 | exon | 59581135 | 59581260 | 59581135 | ID=Msa0691450-mRNA-1:exon:16212;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59581289 | 59581519 | 59581289 | ID=Msa0691450-mRNA-1:exon:16211;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59582765 | 59582830 | 59582765 | ID=Msa0691450-mRNA-1:exon:16210;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59583370 | 59583432 | 59583370 | ID=Msa0691450-mRNA-1:exon:16209;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59583650 | 59583735 | 59583650 | ID=Msa0691450-mRNA-1:exon:16208;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59584045 | 59584114 | 59584045 | ID=Msa0691450-mRNA-1:exon:16207;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59584883 | 59584981 | 59584883 | ID=Msa0691450-mRNA-1:exon:16206;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59585347 | 59585403 | 59585347 | ID=Msa0691450-mRNA-1:exon:16205;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59587128 | 59587174 | 59587128 | ID=Msa0691450-mRNA-1:exon:16204;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59587270 | 59587472 | 59587270 | ID=Msa0691450-mRNA-1:exon:16203;Parent=Msa0691450-mRNA-1 |
| chr4_4 | exon | 59587955 | 59588277 | 59587955 | ID=Msa0691450-mRNA-1:exon:16202;Parent=Msa0691450-mRNA-1 |
| chr4_4 | five_prime_UTR | 59587955 | 59588277 | 59587955 | ID=Msa0691450-mRNA-1:five_prime_utr;Parent=Msa0691450-mRNA-1 |
| chr4_4 | five_prime_UTR | 59587453 | 59587472 | 59587453 | ID=Msa0691450-mRNA-1:five_prime_utr;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59587270 | 59587452 | 59587270 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59587128 | 59587174 | 59587128 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59585347 | 59585403 | 59585347 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59584883 | 59584981 | 59584883 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59584045 | 59584114 | 59584045 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59583650 | 59583735 | 59583650 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59583370 | 59583432 | 59583370 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59582765 | 59582830 | 59582765 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | CDS | 59581471 | 59581519 | 59581471 | ID=Msa0691450-mRNA-1:cds;Parent=Msa0691450-mRNA-1 |
| chr4_4 | three_prime_UTR | 59581289 | 59581470 | 59581289 | ID=Msa0691450-mRNA-1:three_prime_utr;Parent=Msa0691450-mRNA-1 |
| chr4_4 | three_prime_UTR | 59581135 | 59581260 | 59581135 | ID=Msa0691450-mRNA-1:three_prime_utr;Parent=Msa0691450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
