AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0227400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227400 MtrunA17_Chr2g0310581 96.985 199 6 0 1 199 315 513 1.75e-135 389
Msa0227400 MtrunA17_Chr6g0483491 51.799 139 63 2 1 137 269 405 1.65e-33 124
Msa0227400 MtrunA17_Chr7g0236841 51.799 139 63 2 1 137 269 405 2.25e-33 123
Msa0227400 MtrunA17_Chr1g0155201 44.348 115 61 1 24 138 164 275 3.66e-25 100
Msa0227400 MtrunA17_Chr3g0121351 47.872 94 49 0 9 102 431 524 3.90e-24 99.0
Msa0227400 MtrunA17_Chr3g0107851 51.685 89 43 0 9 97 396 484 5.00e-24 98.6
Msa0227400 MtrunA17_Chr3g0098121 55.056 89 40 0 9 97 423 511 5.19e-24 99.0
Msa0227400 MtrunA17_Chr2g0300291 53.933 89 41 0 9 97 413 501 4.12e-23 96.3
Msa0227400 MtrunA17_Chr5g0429221 39.130 138 81 1 1 138 265 399 1.56e-22 94.0
Msa0227400 MtrunA17_Chr4g0063551 40.367 109 60 1 9 112 428 536 7.36e-22 92.4
Msa0227400 MtrunA17_Chr1g0176041 43.617 94 53 0 9 102 439 532 8.00e-22 92.4
Msa0227400 MtrunA17_Chr2g0293631 47.872 94 45 1 9 98 766 859 1.38e-21 92.0
Msa0227400 MtrunA17_Chr5g0409981 42.574 101 58 0 1 101 371 471 2.31e-21 90.9
Msa0227400 MtrunA17_Chr2g0330401 45.745 94 51 0 9 102 367 460 2.44e-21 90.9
Msa0227400 MtrunA17_Chr7g0263771 43.333 90 51 0 12 101 401 490 2.55e-21 90.9
Msa0227400 MtrunA17_Chr7g0271121 44.898 98 54 0 11 108 380 477 3.51e-21 90.5
Msa0227400 MtrunA17_Chr4g0076491 45.000 100 52 1 5 101 569 668 4.00e-21 90.5
Msa0227400 MtrunA17_Chr6g0449741 45.652 92 50 0 10 101 537 628 8.49e-21 89.4
Msa0227400 MtrunA17_Chr2g0277821 43.478 92 48 1 11 98 779 870 8.83e-21 89.7
Msa0227400 MtrunA17_Chr6g0449911 45.455 99 50 1 9 103 435 533 1.13e-20 89.4
Msa0227400 MtrunA17_Chr1g0155691 37.705 122 74 1 9 130 30 149 2.94e-20 84.3
Msa0227400 MtrunA17_Chr3g0137901 42.105 95 54 1 9 102 68 162 3.88e-20 83.6
Msa0227400 MtrunA17_Chr1g0200181 46.341 82 44 0 8 89 421 502 5.46e-20 87.0
Msa0227400 MtrunA17_Chr5g0442191 50.000 88 44 0 11 98 353 440 7.50e-20 86.7
Msa0227400 MtrunA17_Chr1g0157691 45.122 82 45 0 8 89 423 504 1.75e-19 85.5
Msa0227400 MtrunA17_Chr4g0040761 39.130 115 69 1 10 124 289 402 2.23e-19 85.5
Msa0227400 MtrunA17_Chr1g0149251 42.105 95 54 1 9 102 232 326 3.34e-19 84.0
Msa0227400 MtrunA17_Chr2g0297261 39.796 98 59 0 9 106 299 396 3.87e-19 84.3
Msa0227400 MtrunA17_Chr4g0070981 39.785 93 56 0 6 98 303 395 1.96e-18 82.4
Msa0227400 MtrunA17_Chr1g0193491 44.565 92 51 0 17 108 395 486 1.96e-18 82.8
Msa0227400 MtrunA17_Chr2g0299681 36.036 111 71 0 6 116 303 413 3.20e-18 81.6
Msa0227400 MtrunA17_Chr3g0095031 47.727 88 46 0 11 98 362 449 3.71e-18 81.6
Msa0227400 MtrunA17_Chr2g0329931 39.785 93 56 0 6 98 303 395 5.01e-18 81.3
Msa0227400 MtrunA17_Chr8g0342861 36.634 101 64 0 6 106 303 403 8.83e-18 80.5
Msa0227400 MtrunA17_Chr4g0003441 41.053 95 55 1 9 102 376 470 1.53e-17 80.1
Msa0227400 MtrunA17_Chr4g0062301 38.889 108 62 2 8 114 370 474 1.58e-17 80.1
Msa0227400 MtrunA17_Chr7g0270131 43.820 89 49 1 10 97 504 592 2.02e-17 79.7
Msa0227400 MtrunA17_Chr4g0029191 33.871 124 79 1 12 135 391 511 1.66e-16 77.0
Msa0227400 MtrunA17_Chr6g0466611 48.936 94 43 3 19 108 436 528 2.64e-16 76.6
Msa0227400 MtrunA17_Chr7g0247191 46.575 73 39 0 18 90 422 494 3.28e-16 76.3
Msa0227400 MtrunA17_Chr4g0004301 44.872 78 43 0 14 91 368 445 3.60e-16 75.9
Msa0227400 MtrunA17_Chr3g0114081 49.315 73 37 0 11 83 309 381 4.59e-16 75.9
Msa0227400 MtrunA17_Chr7g0247181 45.205 73 40 0 18 90 412 484 5.10e-16 75.5
Msa0227400 MtrunA17_Chr7g0247221 45.205 73 40 0 18 90 415 487 5.16e-16 75.5
Msa0227400 MtrunA17_Chr2g0307471 38.889 90 53 1 1 88 356 445 7.14e-16 75.1
Msa0227400 MtrunA17_Chr7g0236831 40.230 87 52 0 1 87 494 580 1.11e-15 74.7
Msa0227400 MtrunA17_Chr5g0434301 43.590 78 44 0 14 91 368 445 1.97e-15 73.9
Msa0227400 MtrunA17_Chr2g0309551 33.333 114 76 0 2 115 426 539 1.98e-15 73.9
Msa0227400 MtrunA17_Chr2g0301281 36.190 105 64 1 12 116 388 489 5.13e-15 72.8
Msa0227400 MtrunA17_Chr8g0342851 41.892 74 43 0 27 100 230 303 8.89e-15 71.2
Msa0227400 MtrunA17_Chr8g0354761 33.333 99 66 0 1 99 274 372 1.69e-14 71.2
Msa0227400 MtrunA17_Chr1g0204391 50.649 77 38 0 9 85 336 412 2.35e-14 70.9
Msa0227400 MtrunA17_Chr6g0475251 50.649 77 38 0 9 85 379 455 2.59e-14 70.9
Msa0227400 MtrunA17_Chr8g0364251 45.333 75 40 1 20 94 473 546 8.53e-13 66.2
Msa0227400 MtrunA17_Chr6g0461751 32.110 109 67 1 9 110 413 521 2.01e-12 65.1
Msa0227400 MtrunA17_Chr4g0025141 43.056 72 31 2 27 88 128 199 7.36e-12 62.4
Msa0227400 MtrunA17_Chr4g0025101 35.294 102 51 3 13 99 86 187 1.16e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0227400 AT1G16280.1 59.302 172 66 2 1 170 321 490 4.65e-62 200
Msa0227400 AT5G60990.1 52.066 121 58 0 17 137 295 415 4.45e-37 134
Msa0227400 AT3G58510.1 45.745 94 51 0 9 102 435 528 6.17e-23 95.9
Msa0227400 AT3G58510.3 45.745 94 51 0 9 102 435 528 6.17e-23 95.9
Msa0227400 AT3G58510.2 45.745 94 51 0 9 102 435 528 6.17e-23 95.9
Msa0227400 AT5G14610.1 48.936 94 44 1 9 98 500 593 7.57e-23 95.9
Msa0227400 AT5G14610.7 48.936 94 44 1 9 98 301 394 9.25e-23 95.5
Msa0227400 AT5G14610.3 48.936 94 44 1 9 98 301 394 9.25e-23 95.5
Msa0227400 AT3G58570.1 45.745 94 51 0 9 102 432 525 1.23e-22 95.1
Msa0227400 AT2G42520.2 46.809 94 50 0 9 102 445 538 2.75e-22 94.4
Msa0227400 AT2G42520.1 46.809 94 50 0 9 102 445 538 2.75e-22 94.4
Msa0227400 AT2G42520.3 46.809 94 50 0 9 102 445 538 2.75e-22 94.4
Msa0227400 AT4G16630.1 53.933 89 41 0 9 97 439 527 3.53e-22 94.0
Msa0227400 AT5G14610.5 48.936 94 44 1 9 98 440 533 3.75e-22 94.0
Msa0227400 AT5G14610.6 48.936 94 44 1 9 98 432 525 4.19e-22 93.6
Msa0227400 AT5G14610.2 48.936 94 44 1 9 98 432 525 4.19e-22 93.6
Msa0227400 AT5G63120.2 40.000 100 60 0 9 108 437 536 1.59e-21 92.0
Msa0227400 AT1G31970.1 49.367 79 40 0 9 87 393 471 2.87e-21 91.3
Msa0227400 AT5G26742.1 46.939 98 52 0 11 108 379 476 6.58e-21 90.1
Msa0227400 AT5G26742.2 46.939 98 52 0 11 108 379 476 6.59e-21 90.1
Msa0227400 AT5G26742.3 46.465 99 53 0 11 109 286 384 8.75e-21 89.7
Msa0227400 AT2G33730.1 43.478 92 52 0 10 101 604 695 1.50e-20 89.4
Msa0227400 AT1G55150.1 43.617 94 53 0 9 102 371 464 1.63e-20 89.0
Msa0227400 AT1G55150.2 43.617 94 53 0 9 102 396 489 1.88e-20 89.0
Msa0227400 AT3G09720.2 38.596 114 65 2 9 121 407 516 3.91e-20 87.8
Msa0227400 AT3G09720.1 38.596 114 65 2 9 121 407 516 3.91e-20 87.8
Msa0227400 AT3G06480.1 46.809 94 46 1 9 98 706 799 8.75e-20 87.0
Msa0227400 AT3G01540.1 45.455 99 50 1 9 103 429 527 9.11e-20 87.0
Msa0227400 AT3G01540.4 45.455 99 50 1 9 103 429 527 9.20e-20 87.0
Msa0227400 AT3G01540.2 45.455 99 50 1 9 103 429 527 9.20e-20 87.0
Msa0227400 AT3G01540.3 45.455 99 50 1 9 103 429 527 9.20e-20 87.0
Msa0227400 AT1G20920.4 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT1G20920.6 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT1G20920.3 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT1G20920.7 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT1G20920.5 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT1G20920.1 41.304 92 50 1 11 98 805 896 1.14e-19 86.7
Msa0227400 AT3G18600.1 33.974 156 99 3 1 153 353 507 1.73e-19 85.9
Msa0227400 AT5G51280.1 46.341 82 44 0 8 89 423 504 1.77e-19 85.9
Msa0227400 AT1G77030.1 36.885 122 76 1 8 129 297 417 2.34e-19 85.9
Msa0227400 AT3G22310.2 46.591 88 47 0 11 98 389 476 4.55e-19 84.7
Msa0227400 AT3G22310.1 46.591 88 47 0 11 98 389 476 4.58e-19 84.7
Msa0227400 AT1G20920.2 41.304 92 50 1 11 98 467 558 5.02e-19 84.7
Msa0227400 AT3G19760.1 38.776 98 60 0 9 106 301 398 6.38e-19 84.0
Msa0227400 AT3G09620.1 40.952 105 52 3 1 98 633 734 1.34e-18 83.6
Msa0227400 AT3G09620.2 40.952 105 52 3 1 98 634 735 1.41e-18 83.6
Msa0227400 AT4G33370.1 46.341 82 44 0 8 89 374 455 1.45e-18 83.2
Msa0227400 AT2G47330.1 49.438 89 44 1 10 97 501 589 1.47e-18 83.6
Msa0227400 AT3G22330.1 44.318 88 49 0 11 98 377 464 2.07e-18 82.8
Msa0227400 AT1G51380.1 41.111 90 53 0 9 98 288 377 2.76e-18 82.0
Msa0227400 AT3G13920.3 38.710 93 57 0 6 98 292 384 1.55e-17 80.1
Msa0227400 AT3G13920.4 38.710 93 57 0 6 98 297 389 1.61e-17 80.1
Msa0227400 AT3G13920.1 38.710 93 57 0 6 98 302 394 2.00e-17 79.7
Msa0227400 AT1G54270.2 38.710 93 57 0 6 98 297 389 3.77e-17 79.0
Msa0227400 AT3G13920.2 41.176 85 50 0 6 90 302 386 4.71e-17 78.6
Msa0227400 AT1G54270.1 38.710 93 57 0 6 98 302 394 4.75e-17 78.6
Msa0227400 AT3G13920.5 41.176 85 50 0 6 90 306 390 4.77e-17 78.6
Msa0227400 AT5G11170.2 40.659 91 53 1 9 98 232 322 6.72e-17 77.8
Msa0227400 AT1G72730.1 37.634 93 58 0 6 98 304 396 1.19e-16 77.4
Msa0227400 AT2G40700.1 45.349 86 47 0 12 97 380 465 1.20e-16 77.8
Msa0227400 AT5G11200.2 40.659 91 53 1 9 98 374 464 1.28e-16 77.8
Msa0227400 AT5G11170.1 40.659 91 53 1 9 98 315 405 1.30e-16 77.4
Msa0227400 AT5G11200.1 40.659 91 53 1 9 98 315 405 1.30e-16 77.4
Msa0227400 AT1G28180.1 45.349 86 47 0 9 94 245 330 1.34e-16 77.0
Msa0227400 AT2G45810.1 47.945 73 38 0 18 90 427 499 1.60e-16 77.4
Msa0227400 AT5G11200.3 40.659 91 53 1 9 98 356 446 2.29e-16 77.0
Msa0227400 AT3G61240.2 46.575 73 39 0 18 90 397 469 8.49e-16 75.5
Msa0227400 AT3G61240.1 46.575 73 39 0 18 90 397 469 8.49e-16 75.5
Msa0227400 AT1G71370.1 48.052 77 40 0 18 94 305 381 1.36e-15 74.7
Msa0227400 AT4G00660.1 45.205 73 40 0 18 90 404 476 1.78e-15 74.3
Msa0227400 AT4G00660.2 45.205 73 40 0 18 90 404 476 1.78e-15 74.3
Msa0227400 AT5G65900.1 45.570 79 42 1 18 95 436 514 2.05e-15 74.3
Msa0227400 AT4G15850.1 41.379 87 48 1 17 103 373 456 5.42e-15 73.2
Msa0227400 AT3G16840.1 35.165 91 59 0 1 91 521 611 7.16e-15 72.8
Msa0227400 AT3G16840.2 35.165 91 59 0 1 91 522 612 7.23e-15 72.8
Msa0227400 AT5G62190.1 49.333 75 38 0 11 85 375 449 1.92e-14 71.6
Msa0227400 AT5G05450.1 51.515 66 32 0 18 83 314 379 4.14e-14 70.5
Msa0227400 AT4G09730.1 48.148 81 39 2 20 98 408 487 7.35e-14 69.7
Msa0227400 AT1G12770.2 28.696 115 82 0 2 116 427 541 9.35e-13 66.6
Msa0227400 AT1G12770.1 28.696 115 82 0 2 116 427 541 9.35e-13 66.6
Msa0227400 AT3G02065.1 34.831 89 58 0 9 97 248 336 1.90e-12 65.5
Msa0227400 AT1G59990.1 36.364 99 57 3 3 97 442 538 2.46e-12 65.5
Msa0227400 AT1G59990.2 36.364 99 57 3 3 97 442 538 2.68e-12 65.1
Msa0227400 AT3G02065.3 34.831 89 58 0 9 97 385 473 2.79e-12 65.1
Msa0227400 AT3G02065.2 34.831 89 58 0 9 97 385 473 2.79e-12 65.1
Msa0227400 AT3G06980.1 41.667 108 50 4 2 104 665 764 4.83e-12 64.7

Find 49 sgRNAs with CRISPR-Local

Find 215 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTATTGATGTGCGATTT+TGG 0.069864 2_1:-78313787 Msa0227400:three_prime_UTR
TTTCAAGTTGCCTTTCAATA+AGG 0.261004 2_1:+78314451 None:intergenic
GGTCCTTTCTCTCATGAAAA+AGG 0.339350 2_1:-78314406 Msa0227400:intron
ATATACTAACATTATATCTT+AGG 0.344068 2_1:-78313754 Msa0227400:three_prime_UTR
TTCAAGTTGCCTTTCAATAA+GGG 0.355499 2_1:+78314452 None:intergenic
AGCACTTCATGACTTTAAAT+CGG 0.371006 2_1:-78316775 Msa0227400:CDS
AGAATGATGTTGATCTCATT+CGG 0.393814 2_1:-78314485 Msa0227400:CDS
TGATGTTGCTGGCCGTGGTC+TGG 0.400189 2_1:-78316727 Msa0227400:CDS
GAGAATAAATTGTTATATCT+AGG 0.420139 2_1:-78313993 Msa0227400:exon
ATTTCCAAAGGGAAATAAAC+AGG 0.433196 2_1:-78314076 Msa0227400:CDS
TTTATATTCATTCAGATCAC+AGG 0.452733 2_1:-78316811 Msa0227400:CDS
CGCTTTGAGCCTTGTTACCC+AGG 0.459600 2_1:-78316517 Msa0227400:intron
GCACTTCATGACTTTAAATC+GGG 0.464876 2_1:-78316774 Msa0227400:CDS
ACATCAGTTGCTAGTAATAC+AGG 0.466128 2_1:+78316744 None:intergenic
GAATGATGTTGATCTCATTC+GGG 0.473257 2_1:-78314484 Msa0227400:CDS
AATACATTGTAATAGTCAAC+TGG 0.474121 2_1:-78313726 Msa0227400:three_prime_UTR
GCAACTGATGTTGCTGGCCG+TGG 0.474774 2_1:-78316732 Msa0227400:CDS
TTACTAGCAACTGATGTTGC+TGG 0.478835 2_1:-78316738 Msa0227400:CDS
TCATCGTTTAAATTTAATGC+TGG 0.487305 2_1:-78316859 Msa0227400:exon
ACACGATGGATATAATCTCT+TGG 0.493233 2_1:+78316573 None:intergenic
AAAATGAAGATGATGGATGA+TGG 0.500359 2_1:-78314198 Msa0227400:CDS
ATGTAACATCAATAAAGAAA+AGG 0.515167 2_1:-78314026 Msa0227400:CDS
TCATGACTTTAAATCGGGAA+AGG 0.537190 2_1:-78316769 Msa0227400:CDS
CTGAAAACGCTAGAAGAGAA+AGG 0.539201 2_1:-78314138 Msa0227400:CDS
TTATCAATTATGATGTTCCA+AGG 0.541234 2_1:-78316683 Msa0227400:intron
AAAGGTGAGATATATTAAAG+TGG 0.543356 2_1:-78313860 Msa0227400:three_prime_UTR
AGAAATAAAGAATTTCCAAA+GGG 0.544679 2_1:-78314087 Msa0227400:CDS
TTGCTCTTACCTGGGTAACA+AGG 0.566935 2_1:+78316508 None:intergenic
AAATGAAGATGATGGATGAT+GGG 0.569525 2_1:-78314197 Msa0227400:CDS
GTTGGTCGTACTGCAAGAGC+AGG 0.570495 2_1:-78316552 Msa0227400:CDS
CGTACTGCAAGAGCAGGTAG+AGG 0.571058 2_1:-78316546 Msa0227400:CDS
GATTGAATACAAAGAAAATG+AGG 0.578047 2_1:-78314427 Msa0227400:CDS
AAGAAATAAAGAATTTCCAA+AGG 0.580214 2_1:-78314088 Msa0227400:CDS
TTGATAACAAGGTCAACTGT+AGG 0.593803 2_1:+78316699 None:intergenic
AAATAGAGACCCTTATTGAA+AGG 0.594933 2_1:-78314461 Msa0227400:CDS
GACTGAGAGGAGCAAAGTCA+TGG 0.596253 2_1:-78313838 Msa0227400:three_prime_UTR
GGCTAGTAATAATAATACAA+TGG 0.604004 2_1:+78313624 None:intergenic
GTATTATTATTACTAGCCGA+AGG 0.605706 2_1:-78313619 None:intergenic
GTACTGCAAGAGCAGGTAGA+GGG 0.607328 2_1:-78316545 Msa0227400:CDS
AGAGATTATATCCATCGTGT+TGG 0.616654 2_1:-78316570 Msa0227400:CDS
GAACATCATAATTGATAACA+AGG 0.620825 2_1:+78316688 None:intergenic
CATTCAGATCACAGGCTCAG+AGG 0.620865 2_1:-78316803 Msa0227400:CDS
ATATATTAAAGTGGACTGAG+AGG 0.625430 2_1:-78313851 Msa0227400:three_prime_UTR
TTGAAGAGAAAGCGAAAGAG+CGG 0.641782 2_1:-78314173 Msa0227400:CDS
TACTGCAAGAGCAGGTAGAG+GGG 0.643242 2_1:-78316544 Msa0227400:CDS
ACTGCAAGAGCAGGTAGAGG+GGG 0.650965 2_1:-78316543 Msa0227400:CDS
AAAATCAAGGATATCAGACA+AGG 0.682828 2_1:-78313909 Msa0227400:three_prime_UTR
TTGCAGTACGACCAACACGA+TGG 0.688798 2_1:+78316559 None:intergenic
CTGTAGGTATATCCAGACCA+CGG 0.748122 2_1:+78316715 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATACTGATATT+TGG - chr2_1:78314924-78314943 Msa0227400:intron 10.0%
!! AACGAATAATAAAACAAATT+TGG + chr2_1:78313840-78313859 None:intergenic 15.0%
!! TTCCATTATCTATTTATATA+AGG + chr2_1:78314249-78314268 None:intergenic 15.0%
!!! TGATGAAAATTTCAAATTTT+TGG - chr2_1:78314316-78314335 Msa0227400:intron 15.0%
!! TTGAATTTAAATTAGTAAAG+AGG + chr2_1:78315480-78315499 None:intergenic 15.0%
!!! TATTAACTATAATTTTCTCT+TGG + chr2_1:78315524-78315543 None:intergenic 15.0%
!! AAGAGAAAATTATAGTTAAT+AGG - chr2_1:78315523-78315542 Msa0227400:intron 15.0%
!! TTTAATTACAAAGTTAGATA+TGG + chr2_1:78315794-78315813 None:intergenic 15.0%
!! ATATACTAACATTATATCTT+AGG - chr2_1:78316730-78316749 Msa0227400:CDS 15.0%
!! CATTATCTATTTATATAAGG+TGG + chr2_1:78314246-78314265 None:intergenic 20.0%
!! CACCTTATATAAATAGATAA+TGG - chr2_1:78314244-78314263 Msa0227400:intron 20.0%
!!! AAAATTTCAAATTTTTGGCT+TGG - chr2_1:78314321-78314340 Msa0227400:intron 20.0%
!! ATATAAAGAATGCATAAAGA+TGG + chr2_1:78314363-78314382 None:intergenic 20.0%
!! ATATATAAATGAGACAAAGA+AGG + chr2_1:78314693-78314712 None:intergenic 20.0%
!!! GATATTTTGTCAAAAAAGAA+AGG - chr2_1:78315025-78315044 Msa0227400:intron 20.0%
!! AATACATTACAGATGAATTT+CGG - chr2_1:78315498-78315517 Msa0227400:intron 20.0%
!! ATTATAGTTAATAGGCATAT+AGG - chr2_1:78315531-78315550 Msa0227400:intron 20.0%
!!! AAGATATTAGTGTTTTATTG+AGG - chr2_1:78315596-78315615 Msa0227400:intron 20.0%
!!! AGATATTAGTGTTTTATTGA+GGG - chr2_1:78315597-78315616 Msa0227400:intron 20.0%
!! AAAGTTATGAAGTTGTTTAT+TGG - chr2_1:78315657-78315676 Msa0227400:intron 20.0%
!! AAGTTATGAAGTTGTTTATT+GGG - chr2_1:78315658-78315677 Msa0227400:intron 20.0%
!!! AAGTTCTCTAATTTTTTGAA+GGG - chr2_1:78315692-78315711 Msa0227400:intron 20.0%
!!! TATCTATCCTTGATTTTTTT+TGG - chr2_1:78315761-78315780 Msa0227400:intron 20.0%
!!! ATCTATCCTTGATTTTTTTT+GGG - chr2_1:78315762-78315781 Msa0227400:intron 20.0%
!! CTAACTTTGTAATTAAATTC+TGG - chr2_1:78315797-78315816 Msa0227400:intron 20.0%
!! TTTCTAACATAATCATAACT+AGG + chr2_1:78315870-78315889 None:intergenic 20.0%
!!! ATTCTATTTCTGTTGTAAAT+TGG + chr2_1:78315899-78315918 None:intergenic 20.0%
!! AAGAAATAAAGAATTTCCAA+AGG - chr2_1:78316396-78316415 Msa0227400:intron 20.0%
!! AGAAATAAAGAATTTCCAAA+GGG - chr2_1:78316397-78316416 Msa0227400:intron 20.0%
!! ATGTAACATCAATAAAGAAA+AGG - chr2_1:78316458-78316477 Msa0227400:intron 20.0%
!! GAGAATAAATTGTTATATCT+AGG - chr2_1:78316491-78316510 Msa0227400:intron 20.0%
!! AAAAACCTAAACATTATAAG+AGG + chr2_1:78316831-78316850 None:intergenic 20.0%
!!! ATAATGTTTAGGTTTTTATG+TGG - chr2_1:78316834-78316853 Msa0227400:CDS 20.0%
! TCATCGTTTAAATTTAATGC+TGG - chr2_1:78313625-78313644 Msa0227400:three_prime_UTR 25.0%
! TTTATATTCATTCAGATCAC+AGG - chr2_1:78313673-78313692 Msa0227400:three_prime_UTR 25.0%
!! GAACATCATAATTGATAACA+AGG + chr2_1:78313799-78313818 None:intergenic 25.0%
! TTATCAATTATGATGTTCCA+AGG - chr2_1:78313801-78313820 Msa0227400:three_prime_UTR 25.0%
!! ATTTGAAGCATTTGATGAAA+CGG - chr2_1:78313863-78313882 Msa0227400:three_prime_UTR 25.0%
! TTTGCTTTCAGAAAATGTAA+CGG + chr2_1:78314083-78314102 None:intergenic 25.0%
!!! TTACATTTTCTGAAAGCAAA+TGG - chr2_1:78314083-78314102 Msa0227400:CDS 25.0%
! CAAAAGAAGGAAATTTGTAA+GGG + chr2_1:78314114-78314133 None:intergenic 25.0%
! ACAAAAGAAGGAAATTTGTA+AGG + chr2_1:78314115-78314134 None:intergenic 25.0%
! TTTCACAGTAATGTTTATGA+GGG + chr2_1:78314404-78314423 None:intergenic 25.0%
! ATTTCACAGTAATGTTTATG+AGG + chr2_1:78314405-78314424 None:intergenic 25.0%
!! TTATTCTAGTTGGATTCAAA+TGG - chr2_1:78314476-78314495 Msa0227400:CDS 25.0%
! TTCATCAATTAACAACCTTA+AGG + chr2_1:78314522-78314541 None:intergenic 25.0%
! TAGATAGTTAAACAATTTGC+TGG + chr2_1:78314557-78314576 None:intergenic 25.0%
! CTAAATTGTATGACAAAGAA+AGG + chr2_1:78314599-78314618 None:intergenic 25.0%
! TGTACATAGGCAATAAAATA+AGG + chr2_1:78314636-78314655 None:intergenic 25.0%
! TTTATTGCCTATGTACAAAA+TGG - chr2_1:78314639-78314658 Msa0227400:intron 25.0%
! TTATTGCCTATGTACAAAAT+GGG - chr2_1:78314640-78314659 Msa0227400:intron 25.0%
! CATGTGTAAAAATAAGGATA+AGG + chr2_1:78314717-78314736 None:intergenic 25.0%
!!! TGTTCAGACATTTACTTTTT+TGG - chr2_1:78314749-78314768 Msa0227400:intron 25.0%
!!! GTTCAGACATTTACTTTTTT+GGG - chr2_1:78314750-78314769 Msa0227400:intron 25.0%
!!! TTTACTTTTTTGGGTTAAAG+TGG - chr2_1:78314759-78314778 Msa0227400:intron 25.0%
!! TTTGAAGTGTAGTTATGTAA+TGG - chr2_1:78314978-78314997 Msa0227400:intron 25.0%
! AAGTAGAAAATGTTCGAAAA+GGG + chr2_1:78315076-78315095 None:intergenic 25.0%
! AATTTAGTGGTAATTAACTC+TGG + chr2_1:78315136-78315155 None:intergenic 25.0%
!! AAGCAAAGTTTAGAATTTAG+TGG + chr2_1:78315149-78315168 None:intergenic 25.0%
!! TTTTATTGAGGGAAAGTTTT+AGG - chr2_1:78315608-78315627 Msa0227400:intron 25.0%
! CTTCAAAAAATTAGAGAACT+TGG + chr2_1:78315693-78315712 None:intergenic 25.0%
!!! CAAGTTCTCTAATTTTTTGA+AGG - chr2_1:78315691-78315710 Msa0227400:intron 25.0%
!! TGGCTTTTATTGAATAATTC+TGG + chr2_1:78315831-78315850 None:intergenic 25.0%
! GTTATGATTATGTTAGAAAC+TGG - chr2_1:78315871-78315890 Msa0227400:intron 25.0%
! TTATAGAATGCACACAATTT+AGG - chr2_1:78315929-78315948 Msa0227400:intron 25.0%
! GATTGAATACAAAGAAAATG+AGG - chr2_1:78316057-78316076 Msa0227400:intron 25.0%
!!! TGAAAAAGGTATGTTTTTAC+AGG - chr2_1:78316092-78316111 Msa0227400:intron 25.0%
! TAAACAGGAAAAAGTGAAAT+TGG - chr2_1:78316423-78316442 Msa0227400:intron 25.0%
!!! GGTGAGATGTATTATTTTTT+TGG - chr2_1:78316596-78316615 Msa0227400:intron 25.0%
!!! GAGATGTATTATTTTTTTGG+TGG - chr2_1:78316599-78316618 Msa0227400:intron 25.0%
!!! ATTATTTTTTTGGTGGTGAA+AGG - chr2_1:78316606-78316625 Msa0227400:intron 25.0%
! AAAGGTGAGATATATTAAAG+TGG - chr2_1:78316624-78316643 Msa0227400:intron 25.0%
! AATACATTGTAATAGTCAAC+TGG - chr2_1:78316758-78316777 Msa0227400:CDS 25.0%
!! GTTTTCCTCTTATAATGTTT+AGG - chr2_1:78316823-78316842 Msa0227400:CDS 25.0%
! GGCTAGTAATAATAATACAA+TGG + chr2_1:78316863-78316882 None:intergenic 25.0%
AGCACTTCATGACTTTAAAT+CGG - chr2_1:78313709-78313728 Msa0227400:three_prime_UTR 30.0%
TTGGAAAAGAAAAGTAACCT+TGG + chr2_1:78313821-78313840 None:intergenic 30.0%
CTGATCATAAAACTTTCACA+TGG - chr2_1:78314030-78314049 Msa0227400:CDS 30.0%
TTGCTTTCAGAAAATGTAAC+GGG + chr2_1:78314082-78314101 None:intergenic 30.0%
TCTTCATTCATTGAATGCAT+TGG - chr2_1:78314146-78314165 Msa0227400:CDS 30.0%
AGCAATGTTCAACATACAAA+TGG + chr2_1:78314216-78314235 None:intergenic 30.0%
! ACCATGACATCTAATTTTCA+TGG + chr2_1:78314279-78314298 None:intergenic 30.0%
AGGATCTCAATTATTCTAGT+TGG - chr2_1:78314466-78314485 Msa0227400:CDS 30.0%
AGGTTGTTAATTGATGAAAG+CGG - chr2_1:78314524-78314543 Msa0227400:intron 30.0%
TTGTTTAACTATCTACCCTT+TGG - chr2_1:78314562-78314581 Msa0227400:intron 30.0%
TATTGCCTATGTACAAAATG+GGG - chr2_1:78314641-78314660 Msa0227400:intron 30.0%
CAAGTGCATGTGTAAAAATA+AGG + chr2_1:78314723-78314742 None:intergenic 30.0%
!! TAGTTATGTAATGGTGTTGT+AGG - chr2_1:78314987-78315006 Msa0227400:intron 30.0%
!! AGTTATGTAATGGTGTTGTA+GGG - chr2_1:78314988-78315007 Msa0227400:intron 30.0%
AGTAGAAAATGTTCGAAAAG+GGG + chr2_1:78315075-78315094 None:intergenic 30.0%
CAAGTAGAAAATGTTCGAAA+AGG + chr2_1:78315077-78315096 None:intergenic 30.0%
TGAATTCAATATTGAGACCA+TGG - chr2_1:78315229-78315248 Msa0227400:intron 30.0%
!! TGTAAACCTCTTTAAAGCTA+AGG + chr2_1:78315279-78315298 None:intergenic 30.0%
TTGCAGAATTGAACACAATT+TGG + chr2_1:78315410-78315429 None:intergenic 30.0%
GTATGATTTATGACACATTG+TGG + chr2_1:78315450-78315469 None:intergenic 30.0%
!!! AGTTTTAGGAAGTGGTTTAT+TGG - chr2_1:78315622-78315641 Msa0227400:intron 30.0%
!!! GTTTTAGGAAGTGGTTTATT+GGG - chr2_1:78315623-78315642 Msa0227400:intron 30.0%
TGGTTTATTGGGAAGATATT+AGG - chr2_1:78315634-78315653 Msa0227400:intron 30.0%
TTATGAAGTTGTTTATTGGG+AGG - chr2_1:78315661-78315680 Msa0227400:intron 30.0%
TATGAAGTTGTTTATTGGGA+GGG - chr2_1:78315662-78315681 Msa0227400:intron 30.0%
!!! TATCCTTGATTTTTTTTGGG+AGG - chr2_1:78315765-78315784 Msa0227400:intron 30.0%
TTTCCTCCCAAAAAAAATCA+AGG + chr2_1:78315771-78315790 None:intergenic 30.0%
!! ATTGAATAATTCTGGTTCAG+TGG + chr2_1:78315823-78315842 None:intergenic 30.0%
TAGGAAACTGAATTGAATAC+TGG + chr2_1:78315851-78315870 None:intergenic 30.0%
AGAATGATGTTGATCTCATT+CGG - chr2_1:78315999-78316018 Msa0227400:intron 30.0%
AAATAGAGACCCTTATTGAA+AGG - chr2_1:78316023-78316042 Msa0227400:intron 30.0%
!! TTCAAGTTGCCTTTCAATAA+GGG + chr2_1:78316035-78316054 None:intergenic 30.0%
!! TTTCAAGTTGCCTTTCAATA+AGG + chr2_1:78316036-78316055 None:intergenic 30.0%
!! ATACCTTTTTCATGAGAGAA+AGG + chr2_1:78316084-78316103 None:intergenic 30.0%
TATGCAATTCAATGCTTAGA+CGG + chr2_1:78316128-78316147 None:intergenic 30.0%
AGAAAGTAAAGAAGTCGTTA+GGG + chr2_1:78316230-78316249 None:intergenic 30.0%
TGTTGCAAAAATGAAGATGA+TGG - chr2_1:78316279-78316298 Msa0227400:intron 30.0%
!! AAAATGAAGATGATGGATGA+TGG - chr2_1:78316286-78316305 Msa0227400:intron 30.0%
!! AAATGAAGATGATGGATGAT+GGG - chr2_1:78316287-78316306 Msa0227400:intron 30.0%
ATTTCCAAAGGGAAATAAAC+AGG - chr2_1:78316408-78316427 Msa0227400:intron 30.0%
! TTTTCCTGTTTATTTCCCTT+TGG + chr2_1:78316415-78316434 None:intergenic 30.0%
! TGTCTGATATCCTTGATTTT+TGG + chr2_1:78316575-78316594 None:intergenic 30.0%
AAAATCAAGGATATCAGACA+AGG - chr2_1:78316575-78316594 Msa0227400:CDS 30.0%
!! ATATATTAAAGTGGACTGAG+AGG - chr2_1:78316633-78316652 Msa0227400:intron 30.0%
! TTCTATTGATGTGCGATTTT+GGG - chr2_1:78316698-78316717 Msa0227400:CDS 30.0%
GCACTTCATGACTTTAAATC+GGG - chr2_1:78313710-78313729 Msa0227400:three_prime_UTR 35.0%
TCATGACTTTAAATCGGGAA+AGG - chr2_1:78313715-78313734 Msa0227400:three_prime_UTR 35.0%
ACATCAGTTGCTAGTAATAC+AGG + chr2_1:78313743-78313762 None:intergenic 35.0%
! TTGATAACAAGGTCAACTGT+AGG + chr2_1:78313788-78313807 None:intergenic 35.0%
! GCATTTGATGAAACGGATTT+CGG - chr2_1:78313870-78313889 Msa0227400:three_prime_UTR 35.0%
ACACGATGGATATAATCTCT+TGG + chr2_1:78313914-78313933 None:intergenic 35.0%
AGAGATTATATCCATCGTGT+TGG - chr2_1:78313914-78313933 Msa0227400:three_prime_UTR 35.0%
! AACAAAGTTTGCTCTTACCT+GGG + chr2_1:78313987-78314006 None:intergenic 35.0%
TGCTTTCAGAAAATGTAACG+GGG + chr2_1:78314081-78314100 None:intergenic 35.0%
ACTCGACTTCAAACAAAAGA+AGG + chr2_1:78314127-78314146 None:intergenic 35.0%
CTTGTAATTCTCATGTTGAC+TGG - chr2_1:78314176-78314195 Msa0227400:CDS 35.0%
GCCATGAAAATTAGATGTCA+TGG - chr2_1:78314275-78314294 Msa0227400:intron 35.0%
AAGAATGCATAAAGATGGCA+GGG + chr2_1:78314358-78314377 None:intergenic 35.0%
AAAGAATGCATAAAGATGGC+AGG + chr2_1:78314359-78314378 None:intergenic 35.0%
TTTATATCAAAGCCCAGCTT+TGG - chr2_1:78314376-78314395 Msa0227400:intron 35.0%
CCTAAACATGATGTATGTGT+TGG + chr2_1:78314449-78314468 None:intergenic 35.0%
CCAACACATACATCATGTTT+AGG - chr2_1:78314446-78314465 Msa0227400:CDS 35.0%
TTTCCGAACTCATATCCTTA+AGG - chr2_1:78314504-78314523 Msa0227400:intron 35.0%
CAACCTTAAGGATATGAGTT+CGG + chr2_1:78314510-78314529 None:intergenic 35.0%
GGTTGTTAATTGATGAAAGC+GGG - chr2_1:78314525-78314544 Msa0227400:intron 35.0%
!!! ACTTTTTTGGGTTAAAGTGG+TGG - chr2_1:78314762-78314781 Msa0227400:intron 35.0%
TTAGAAGATAGCACGTAACT+AGG + chr2_1:78314830-78314849 None:intergenic 35.0%
! TGCTTGTTGAAAAAACCTAG+AGG - chr2_1:78315164-78315183 Msa0227400:intron 35.0%
! GCTTGTTGAAAAAACCTAGA+GGG - chr2_1:78315165-78315184 Msa0227400:intron 35.0%
! AAAAACCTAGAGGGTATGTT+TGG - chr2_1:78315174-78315193 Msa0227400:intron 35.0%
!! TCCTTTCCTTAGCTTTAAAG+AGG - chr2_1:78315270-78315289 Msa0227400:intron 35.0%
!! ACCTCTTTAAAGCTAAGGAA+AGG + chr2_1:78315274-78315293 None:intergenic 35.0%
CTTAAACTGTACATGTGTCT+TGG - chr2_1:78315307-78315326 Msa0227400:intron 35.0%
TTCAGATACATGTCTGGATT+TGG - chr2_1:78315557-78315576 Msa0227400:intron 35.0%
TCAGATACATGTCTGGATTT+GGG - chr2_1:78315558-78315577 Msa0227400:intron 35.0%
!!! ACCAAGACTCTCGAATTTTT+TGG - chr2_1:78315719-78315738 Msa0227400:intron 35.0%
TCCAAAAAATTCGAGAGTCT+TGG + chr2_1:78315723-78315742 None:intergenic 35.0%
!!! AAGACTCTCGAATTTTTTGG+AGG - chr2_1:78315722-78315741 Msa0227400:intron 35.0%
GGAAATCAATGCACAACAAA+AGG + chr2_1:78315961-78315980 None:intergenic 35.0%
GATCAACATCATTCTGCAAA+TGG + chr2_1:78315994-78316013 None:intergenic 35.0%
GAATGATGTTGATCTCATTC+GGG - chr2_1:78316000-78316019 Msa0227400:intron 35.0%
CAGAAAGTAAAGAAGTCGTT+AGG + chr2_1:78316231-78316250 None:intergenic 35.0%
TTTACTTTCTGATGCATTGC+AGG - chr2_1:78316240-78316259 Msa0227400:intron 35.0%
GATTGTTGCTCCAAAAATCA+AGG - chr2_1:78316562-78316581 Msa0227400:CDS 35.0%
! CTTCTATTGATGTGCGATTT+TGG - chr2_1:78316697-78316716 Msa0227400:CDS 35.0%
!!! AAGCAGTACAGATTTTGACT+TGG - chr2_1:78316785-78316804 Msa0227400:CDS 35.0%
TTACTAGCAACTGATGTTGC+TGG - chr2_1:78313746-78313765 Msa0227400:three_prime_UTR 40.0%
GATTTCGGCTATTCACATGT+AGG - chr2_1:78313885-78313904 Msa0227400:three_prime_UTR 40.0%
! CAACAAAGTTTGCTCTTACC+TGG + chr2_1:78313988-78314007 None:intergenic 40.0%
! CTTTCAGAAAATGTAACGGG+GGG + chr2_1:78314079-78314098 None:intergenic 40.0%
GCTTTCAGAAAATGTAACGG+GGG + chr2_1:78314080-78314099 None:intergenic 40.0%
TAACTATCTACCCTTTGGCT+TGG - chr2_1:78314567-78314586 Msa0227400:intron 40.0%
! ACATGCCCCATTTTGTACAT+AGG + chr2_1:78314649-78314668 None:intergenic 40.0%
! TGCTTTGGATAACTTCCAGA+AGG + chr2_1:78314790-78314809 None:intergenic 40.0%
AGATAGCACGTAACTAGGAA+GGG + chr2_1:78314825-78314844 None:intergenic 40.0%
AAGATAGCACGTAACTAGGA+AGG + chr2_1:78314826-78314845 None:intergenic 40.0%
CAATATTGAGACCATGGCTT+TGG - chr2_1:78315235-78315254 Msa0227400:intron 40.0%
ATTTGACATCACCAAAGCCA+TGG + chr2_1:78315249-78315268 None:intergenic 40.0%
AAACTGTACATGTGTCTTGG+TGG - chr2_1:78315310-78315329 Msa0227400:intron 40.0%
GCAAGTTACAGCATACTCAA+GGG + chr2_1:78315339-78315358 None:intergenic 40.0%
TGCAAGTTACAGCATACTCA+AGG + chr2_1:78315340-78315359 None:intergenic 40.0%
AGGTTGTTCAGATACATGTC+TGG - chr2_1:78315551-78315570 Msa0227400:intron 40.0%
!!! TGAGGGAAAGTTTTAGGAAG+TGG - chr2_1:78315614-78315633 Msa0227400:intron 40.0%
CAACATCATTCTGCAAATGG+TGG + chr2_1:78315991-78316010 None:intergenic 40.0%
GGTCCTTTCTCTCATGAAAA+AGG - chr2_1:78316078-78316097 Msa0227400:intron 40.0%
TTGAAGAGAAAGCGAAAGAG+CGG - chr2_1:78316311-78316330 Msa0227400:intron 40.0%
CTGAAAACGCTAGAAGAGAA+AGG - chr2_1:78316346-78316365 Msa0227400:intron 40.0%
CTGTAGGTATATCCAGACCA+CGG + chr2_1:78313772-78313791 None:intergenic 45.0%
TTGCTCTTACCTGGGTAACA+AGG + chr2_1:78313979-78313998 None:intergenic 45.0%
! ATGTTGACTGGTTGCTACGT+CGG - chr2_1:78314188-78314207 Msa0227400:CDS 45.0%
TTTATGAGGGAGCCAAAGCT+GGG + chr2_1:78314391-78314410 None:intergenic 45.0%
GAGACAAAGAAGGCAATCAC+TGG + chr2_1:78314683-78314702 None:intergenic 45.0%
!! GTTAAAGTGGTGGATCCTTC+TGG - chr2_1:78314772-78314791 Msa0227400:intron 45.0%
TCTGCAAATGGTGGCAAAAG+AGG + chr2_1:78315982-78316001 None:intergenic 45.0%
CATTCAGATCACAGGCTCAG+AGG - chr2_1:78313681-78313700 Msa0227400:three_prime_UTR 50.0%
TTGCAGTACGACCAACACGA+TGG + chr2_1:78313928-78313947 None:intergenic 50.0%
GTACTGCAAGAGCAGGTAGA+GGG - chr2_1:78313939-78313958 Msa0227400:three_prime_UTR 50.0%
TACTGCAAGAGCAGGTAGAG+GGG - chr2_1:78313940-78313959 Msa0227400:three_prime_UTR 50.0%
! TCAGAAAATGTAACGGGGGG+CGG + chr2_1:78314076-78314095 None:intergenic 50.0%
GTTTATGAGGGAGCCAAAGC+TGG + chr2_1:78314392-78314411 None:intergenic 50.0%
!! ATCTACCCTTTGGCTTGGCA+TGG - chr2_1:78314572-78314591 Msa0227400:intron 50.0%
AAGGACCATGCCAAGCCAAA+GGG + chr2_1:78314580-78314599 None:intergenic 50.0%
AAAGGACCATGCCAAGCCAA+AGG + chr2_1:78314581-78314600 None:intergenic 50.0%
GGGATGAGTGGTGAATGCTT+TGG + chr2_1:78314805-78314824 None:intergenic 50.0%
CGTAACTAGGAAGGGATGAG+TGG + chr2_1:78314817-78314836 None:intergenic 50.0%
GGGATCCAAACATACCCTCT+AGG + chr2_1:78315182-78315201 None:intergenic 50.0%
AGAATCCACCAGCAGCATAG+GGG + chr2_1:78315202-78315221 None:intergenic 50.0%
GAGAATCCACCAGCAGCATA+GGG + chr2_1:78315203-78315222 None:intergenic 50.0%
TGAGAATCCACCAGCAGCAT+AGG + chr2_1:78315204-78315223 None:intergenic 50.0%
GACTGAGAGGAGCAAAGTCA+TGG - chr2_1:78316646-78316665 Msa0227400:intron 50.0%
GTTGGTCGTACTGCAAGAGC+AGG - chr2_1:78313932-78313951 Msa0227400:three_prime_UTR 55.0%
CGTACTGCAAGAGCAGGTAG+AGG - chr2_1:78313938-78313957 Msa0227400:three_prime_UTR 55.0%
ACTGCAAGAGCAGGTAGAGG+GGG - chr2_1:78313941-78313960 Msa0227400:three_prime_UTR 55.0%
!! CGCTTTGAGCCTTGTTACCC+AGG - chr2_1:78313967-78313986 Msa0227400:three_prime_UTR 55.0%
! CAGAAAATGTAACGGGGGGC+GGG + chr2_1:78314075-78314094 None:intergenic 55.0%
GTTTGGATCCCCTATGCTGC+TGG - chr2_1:78315191-78315210 Msa0227400:intron 55.0%
GCAACTGATGTTGCTGGCCG+TGG - chr2_1:78313752-78313771 Msa0227400:three_prime_UTR 60.0%
TGATGTTGCTGGCCGTGGTC+TGG - chr2_1:78313757-78313776 Msa0227400:three_prime_UTR 60.0%
! AATGTAACGGGGGGCGGGAT+AGG + chr2_1:78314070-78314089 None:intergenic 60.0%
TGGATCCCCTATGCTGCTGG+TGG - chr2_1:78315194-78315213 Msa0227400:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 78313622 78316884 78313622 ID=Msa0227400;Name=Msa0227400
chr2_1 mRNA 78313622 78316884 78313622 ID=Msa0227400-mRNA-1;Parent=Msa0227400;Name=Msa0227400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=19|1|1|1|1|1|4|386|199
chr2_1 exon 78313622 78314244 78313622 ID=Msa0227400-mRNA-1:exon:23879;Parent=Msa0227400-mRNA-1
chr2_1 exon 78314407 78314505 78314407 ID=Msa0227400-mRNA-1:exon:23878;Parent=Msa0227400-mRNA-1
chr2_1 exon 78316518 78316599 78316518 ID=Msa0227400-mRNA-1:exon:23877;Parent=Msa0227400-mRNA-1
chr2_1 exon 78316684 78316884 78316684 ID=Msa0227400-mRNA-1:exon:23876;Parent=Msa0227400-mRNA-1
chr2_1 five_prime_UTR 78316866 78316884 78316866 ID=Msa0227400-mRNA-1:five_prime_utr;Parent=Msa0227400-mRNA-1
chr2_1 CDS 78316684 78316865 78316684 ID=Msa0227400-mRNA-1:cds;Parent=Msa0227400-mRNA-1
chr2_1 CDS 78316518 78316599 78316518 ID=Msa0227400-mRNA-1:cds;Parent=Msa0227400-mRNA-1
chr2_1 CDS 78314407 78314505 78314407 ID=Msa0227400-mRNA-1:cds;Parent=Msa0227400-mRNA-1
chr2_1 CDS 78314008 78314244 78314008 ID=Msa0227400-mRNA-1:cds;Parent=Msa0227400-mRNA-1
chr2_1 three_prime_UTR 78313622 78314007 78313622 ID=Msa0227400-mRNA-1:three_prime_utr;Parent=Msa0227400-mRNA-1
Gene Sequence

>Msa0227400

ATGCTGGAAGTGCTCGATCAAGAAGCTGCAGCTTTATATTCATTCAGATCACAGGCTCAGAGGCTTGAAGCACTTCATGACTTTAAATCGGGAAAGGTTCCTGTATTACTAGCAACTGATGTTGCTGGCCGTGGTCTGGATATACCTACAGTTGACCTTGTTATCAATTATGATGTTCCAAGGTTTCCAAGAGATTATATCCATCGTGTTGGTCGTACTGCAAGAGCAGGTAGAGGGGGACTCGCTTTGAGCCTTGTTACCCAGAATGATGTTGATCTCATTCGGGAAATAGAGACCCTTATTGAAAGGCAACTTGAAATGATTGAATACAAAGAAAATGAGGTCCTTTCTCTCATGAAAAAGGTTTTCAGTGCTAAGAATGTTGCAAAAATGAAGATGATGGATGATGGGTTTGAAGAGAAAGCGAAAGAGCGGAAAAAACAGAAACTGAAAACGCTAGAAGAGAAAGGATTATTGAAGCAAAGAAGTAAGAGAAAAAGAAATAAAGAATTTCCAAAGGGAAATAAACAGGAAAAAGTGAAATTGGATACATCAGCAGATGTAACATCAATAAAGAAAAGGAGTAAAAAGAGAGAATAA
Protein sequence

>Msa0227400

MLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQLEMIEYKENEVLSLMKKVFSAKNVAKMKMMDDGFEEKAKERKKQKLKTLEEKGLLKQRSKRKRNKEFPKGNKQEKVKLDTSADVTSIKKRSKKRE*