Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694630 | XP_003608058.1 | 92.715 | 302 | 15 | 3 | 17 | 313 | 20 | 319 | 0.0 | 556 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694630 | sp|Q922M5|CDA7L_MOUSE | 44.118 | 102 | 55 | 1 | 166 | 265 | 330 | 431 | 1.07e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694630 | G7JNK7 | 92.715 | 302 | 15 | 3 | 17 | 313 | 20 | 319 | 0.0 | 556 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025580 | Msa0694630 | 0.801837 | 7.455879e-49 | -8.615850e-47 |
| Msa0035140 | Msa0694630 | 0.806337 | 8.639327e-50 | -8.615850e-47 |
| Msa0053070 | Msa0694630 | 0.803217 | 3.873741e-49 | -8.615850e-47 |
| Msa0606100 | Msa0694630 | 0.824739 | 6.856920e-54 | -8.615850e-47 |
| Msa0611920 | Msa0694630 | 0.840414 | 8.821792e-58 | -8.615850e-47 |
| Msa0621710 | Msa0694630 | 0.801037 | 1.087566e-48 | -8.615850e-47 |
| Msa0652070 | Msa0694630 | 0.965248 | 2.329697e-124 | -8.615850e-47 |
| Msa0694630 | Msa0703600 | 0.802300 | 5.989663e-49 | -8.615850e-47 |
| Msa0694630 | Msa0709200 | 0.804689 | 1.914628e-49 | -8.615850e-47 |
| Msa0694630 | Msa0709440 | 0.806351 | 8.581786e-50 | -8.615850e-47 |
| Msa0694630 | Msa0756590 | 0.800015 | 1.757211e-48 | -8.615850e-47 |
| Msa0694630 | Msa0773630 | 0.818464 | 1.933991e-52 | -8.615850e-47 |
| Msa0694630 | Msa0800660 | 0.822604 | 2.167334e-53 | -8.615850e-47 |
| Msa0694630 | Msa0818880 | 0.812749 | 3.624801e-51 | -8.615850e-47 |
| Msa0694630 | Msa0863620 | 0.811448 | 6.966997e-51 | -8.615850e-47 |
| Msa0694630 | Msa0966480 | 0.809955 | 1.464804e-50 | -8.615850e-47 |
| Msa0694630 | Msa1037540 | 0.806874 | 6.653355e-50 | -8.615850e-47 |
| Msa0694630 | Msa1042880 | 0.811457 | 6.935243e-51 | -8.615850e-47 |
| Msa0694630 | Msa1084530 | 0.814508 | 1.486515e-51 | -8.615850e-47 |
| Msa0694630 | Msa1114630 | 0.801229 | 9.934095e-49 | -8.615850e-47 |
| Msa0694630 | Msa1116660 | 0.810877 | 9.265870e-51 | -8.615850e-47 |
| Msa0694630 | Msa1125820 | 0.813264 | 2.795750e-51 | -8.615850e-47 |
| Msa0694630 | Msa1125990 | 0.812186 | 4.812178e-51 | -8.615850e-47 |
| Msa0694630 | Msa1132530 | 0.808157 | 3.555473e-50 | -8.615850e-47 |
| Msa0694630 | Msa1171290 | 0.801858 | 7.382915e-49 | -8.615850e-47 |
| Msa0694630 | Msa1244240 | 0.808556 | 2.923278e-50 | -8.615850e-47 |
| Msa0694630 | Msa1446100 | 0.803563 | 3.284323e-49 | -8.615850e-47 |
| Msa0694630 | Msa1447170 | 0.830781 | 2.421094e-55 | -8.615850e-47 |
| Msa0140280 | Msa0694630 | 0.813999 | 1.925842e-51 | -8.615850e-47 |
| Msa0367520 | Msa0694630 | 0.810304 | 1.231894e-50 | -8.615850e-47 |
| Msa0380670 | Msa0694630 | 0.803565 | 3.281605e-49 | -8.615850e-47 |
| Msa0389950 | Msa0694630 | 0.813696 | 2.246497e-51 | -8.615850e-47 |
| Msa0430300 | Msa0694630 | 0.811397 | 7.144456e-51 | -8.615850e-47 |
| Msa0481890 | Msa0694630 | 0.806926 | 6.487882e-50 | -8.615850e-47 |
| Msa0556540 | Msa0694630 | 0.947148 | 1.179802e-105 | -8.615850e-47 |
| Msa0567170 | Msa0694630 | 0.814197 | 1.741826e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694630 | MtrunA17_Chr4g0045521 | 92.715 | 302 | 15 | 3 | 17 | 313 | 20 | 319 | 0.0 | 556 |
| Msa0694630 | MtrunA17_Chr5g0402951 | 51.029 | 243 | 107 | 3 | 39 | 276 | 29 | 264 | 1.31e-78 | 244 |
| Msa0694630 | MtrunA17_Chr5g0402961 | 50.417 | 240 | 106 | 2 | 39 | 272 | 30 | 262 | 1.03e-69 | 222 |
| Msa0694630 | MtrunA17_Chr6g0457221 | 36.066 | 122 | 67 | 3 | 165 | 280 | 34 | 150 | 1.16e-16 | 80.5 |
| Msa0694630 | MtrunA17_Chr6g0479091 | 28.070 | 285 | 150 | 10 | 37 | 266 | 7 | 291 | 1.27e-16 | 79.0 |
| Msa0694630 | MtrunA17_Chr6g0457161 | 33.088 | 136 | 74 | 4 | 165 | 288 | 43 | 173 | 5.12e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0694630 | AT2G23530.1 | 50.204 | 245 | 96 | 5 | 39 | 271 | 29 | 259 | 6.20e-72 | 232 |
| Msa0694630 | AT4G37110.1 | 45.769 | 260 | 114 | 5 | 39 | 276 | 29 | 283 | 5.62e-69 | 221 |
| Msa0694630 | AT4G37110.2 | 48.178 | 247 | 114 | 5 | 39 | 276 | 29 | 270 | 3.07e-68 | 218 |
| Msa0694630 | AT4G37110.3 | 51.648 | 182 | 82 | 3 | 96 | 276 | 12 | 188 | 2.11e-61 | 198 |
| Msa0694630 | AT4G37110.4 | 51.648 | 182 | 82 | 3 | 96 | 276 | 12 | 188 | 2.11e-61 | 198 |
| Msa0694630 | AT1G67780.2 | 34.307 | 137 | 71 | 3 | 165 | 295 | 23 | 146 | 1.09e-16 | 80.9 |
| Msa0694630 | AT1G67780.1 | 34.307 | 137 | 71 | 3 | 165 | 295 | 23 | 146 | 1.09e-16 | 80.9 |
| Msa0694630 | AT5G38690.2 | 37.624 | 101 | 60 | 1 | 168 | 265 | 23 | 123 | 3.87e-14 | 73.2 |
| Msa0694630 | AT5G38690.1 | 37.624 | 101 | 60 | 1 | 168 | 265 | 23 | 123 | 3.87e-14 | 73.2 |
| Msa0694630 | AT1G67270.1 | 36.538 | 104 | 63 | 1 | 165 | 265 | 15 | 118 | 1.25e-13 | 71.6 |
Find 92 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTTGTTAAAGCTTTC+TGG | 0.081932 | 4_4:+63960353 | Msa0694630:CDS |
| TGCTCTTCAGTGTAAATTTC+AGG | 0.143459 | 4_4:-63961428 | None:intergenic |
| GACGAAGGTGTTGTCGTTTC+AGG | 0.147931 | 4_4:+63960263 | Msa0694630:CDS |
| CTGAAAGACGTTCTTCTTCT+AGG | 0.197268 | 4_4:+63960444 | Msa0694630:CDS |
| CTTTCTTGACGCTCTGCTTT+AGG | 0.267050 | 4_4:-63961350 | None:intergenic |
| ATTTCAGGGTTTGTGCCTTC+TGG | 0.277770 | 4_4:-63961413 | None:intergenic |
| AGAACAGAAACATGCCTTAA+TGG | 0.296929 | 4_4:+63963068 | Msa0694630:three_prime_UTR |
| AGAGATCTCTGGTATTTCTT+TGG | 0.321827 | 4_4:-63962957 | None:intergenic |
| TGTTTGTAAGGTGACGAAAT+TGG | 0.331250 | 4_4:+63962850 | Msa0694630:intron |
| TGACATTTCTCTCCCTTGAT+TGG | 0.343032 | 4_4:-63961533 | None:intergenic |
| TGTAGATGTACAAGCCATTA+AGG | 0.354364 | 4_4:-63963082 | None:intergenic |
| ATCTCCACAAAGCCGTCCTT+GGG | 0.359404 | 4_4:-63962287 | None:intergenic |
| TACTGGTAATATATACAATA+AGG | 0.364939 | 4_4:+63962626 | Msa0694630:CDS |
| CCTTGATTGGATCATATATA+TGG | 0.370088 | 4_4:-63961520 | None:intergenic |
| AAGATGGTGATACTATGTTT+TGG | 0.372791 | 4_4:+63963107 | Msa0694630:three_prime_UTR |
| AGGGCTCTGAGAAGTTAAAT+AGG | 0.387414 | 4_4:+63963028 | Msa0694630:exon |
| GCTGAGAGAGTGTGAGAGAA+TGG | 0.391361 | 4_4:+63960160 | None:intergenic |
| GATTGGGAATTGTATGTAGA+TGG | 0.394321 | 4_4:+63961479 | Msa0694630:CDS |
| GAATGGGAACTCGTCGTAGA+AGG | 0.402667 | 4_4:+63960177 | Msa0694630:exon |
| TAGGAGATTGTGAGACTGAT+TGG | 0.407394 | 4_4:+63961462 | Msa0694630:CDS |
| GTCCTAGTCAGTGTTGAATC+TGG | 0.411891 | 4_4:-63962980 | None:intergenic |
| CGCTTGTCACAATAGTTAAC+TGG | 0.416480 | 4_4:-63961326 | None:intergenic |
| TGGATATGAAGACAAGTTGT+TGG | 0.417896 | 4_4:+63963127 | Msa0694630:three_prime_UTR |
| TTGACGGAGGGGCGCGGTGT+TGG | 0.424322 | 4_4:-63960392 | None:intergenic |
| AATCTCCACAAAGCCGTCCT+TGG | 0.429942 | 4_4:-63962288 | None:intergenic |
| CATCGCATTACGAACAGATT+CGG | 0.430803 | 4_4:+63960291 | Msa0694630:CDS |
| AGAGCCCTTCTCGTCCGAAT+TGG | 0.433546 | 4_4:-63963013 | None:intergenic |
| TAATTCACATTTGTTGCAAT+CGG | 0.441018 | 4_4:-63962263 | None:intergenic |
| ATCGCATTACGAACAGATTC+GGG | 0.446329 | 4_4:+63960292 | Msa0694630:CDS |
| TTTGGATTCAATGCCAGCTT+AGG | 0.447077 | 4_4:+63963164 | Msa0694630:three_prime_UTR |
| GCTCTTCAGTGTAAATTTCA+GGG | 0.447331 | 4_4:-63961427 | None:intergenic |
| AGTCCACTTGGGATTGATGC+TGG | 0.452136 | 4_4:-63962541 | None:intergenic |
| TTTAGTTAAATGGCCTAAGC+TGG | 0.462486 | 4_4:-63963177 | None:intergenic |
| GTTATCAAAACTCGGGGCAT+AGG | 0.463673 | 4_4:-63963220 | None:intergenic |
| AGAACGTCTTTCAGATTCGT+TGG | 0.472148 | 4_4:-63960435 | None:intergenic |
| AAAGTTCATCAAGTAAGAAA+AGG | 0.473277 | 4_4:+63961369 | Msa0694630:CDS |
| GGACACTGAGTAGGCCAATT+CGG | 0.474533 | 4_4:+63962999 | Msa0694630:CDS |
| CATGCTTTCCTCAGAGCGAC+GGG | 0.474902 | 4_4:-63962906 | None:intergenic |
| GAAGAATCAGCTTCTGAAGA+TGG | 0.476470 | 4_4:+63960212 | Msa0694630:CDS |
| TTACCCCAAGGACGGCTTTG+TGG | 0.478556 | 4_4:+63962283 | Msa0694630:CDS |
| GAGGAAAGCATGGAAGGATC+AGG | 0.480538 | 4_4:+63962917 | Msa0694630:CDS |
| CGTCTTTCAGATTCGTTGGA+TGG | 0.488192 | 4_4:-63960431 | None:intergenic |
| CCATGCTTTCCTCAGAGCGA+CGG | 0.490576 | 4_4:-63962907 | None:intergenic |
| ACAAGAAGGGCAAGTCCACT+TGG | 0.490962 | 4_4:-63962553 | None:intergenic |
| GTTTGTAAGGTGACGAAATT+GGG | 0.490978 | 4_4:+63962851 | Msa0694630:intron |
| GTTGAATCTGGAGAGATCTC+TGG | 0.493207 | 4_4:-63962968 | None:intergenic |
| TTATCAAAACTCGGGGCATA+GGG | 0.497961 | 4_4:-63963219 | None:intergenic |
| CTGAGAGAGTGTGAGAGAAT+GGG | 0.498766 | 4_4:+63960161 | None:intergenic |
| TTGCAAATTTCTCGACAAGA+AGG | 0.509937 | 4_4:-63962567 | None:intergenic |
| CGCTCTGAGGAAAGCATGGA+AGG | 0.514423 | 4_4:+63962911 | Msa0694630:CDS |
| AAGTAAGAAAAGGAAGGAAG+TGG | 0.520203 | 4_4:+63961379 | Msa0694630:CDS |
| CCATATATATGATCCAATCA+AGG | 0.520783 | 4_4:+63961520 | Msa0694630:CDS |
| TGCAAATTTCTCGACAAGAA+GGG | 0.527573 | 4_4:-63962566 | None:intergenic |
| GCTGAGAGAATGCATAAGCT+TGG | 0.545658 | 4_4:+63960335 | Msa0694630:CDS |
| CAAGAATGTTATCAAAACTC+GGG | 0.546403 | 4_4:-63963227 | None:intergenic |
| TAGATGGATATGATGAGGAT+GGG | 0.547781 | 4_4:+63961495 | Msa0694630:CDS |
| GTAGATGGATATGATGAGGA+TGG | 0.552923 | 4_4:+63961494 | Msa0694630:CDS |
| GTAGGCCAATTCGGACGAGA+AGG | 0.559902 | 4_4:+63963008 | Msa0694630:CDS |
| AGGAGATTGTGAGACTGATT+GGG | 0.560044 | 4_4:+63961463 | Msa0694630:CDS |
| GAGAGAAATGTCATCAATGC+GGG | 0.565621 | 4_4:+63961543 | Msa0694630:CDS |
| CACAATAGTTAACTGGTGGT+AGG | 0.567871 | 4_4:-63961319 | None:intergenic |
| CCGTCGCTCTGAGGAAAGCA+TGG | 0.568211 | 4_4:+63962907 | Msa0694630:CDS |
| CTCCAGATTCAACACTGACT+AGG | 0.570452 | 4_4:+63962978 | Msa0694630:CDS |
| ACAATAGTTAACTGGTGGTA+GGG | 0.571951 | 4_4:-63961318 | None:intergenic |
| GCCACCACGGCGAAAACTGA+CGG | 0.575386 | 4_4:+63960239 | Msa0694630:CDS |
| GAAGAGCATGAGAAGCTGCT+AGG | 0.582500 | 4_4:+63961443 | Msa0694630:CDS |
| TTCATCAAGTAAGAAAAGGA+AGG | 0.585443 | 4_4:+63961373 | Msa0694630:CDS |
| CTTGTACATCTACACGAAGA+TGG | 0.587597 | 4_4:+63963091 | Msa0694630:three_prime_UTR |
| AATAATGTTACCTTGTGTAG+AGG | 0.592456 | 4_4:-63962312 | None:intergenic |
| ACAAGAATGTTATCAAAACT+CGG | 0.594529 | 4_4:-63963228 | None:intergenic |
| TAGGCCAATTCGGACGAGAA+GGG | 0.596764 | 4_4:+63963009 | Msa0694630:CDS |
| ACGAACAGATTCGGGAACAA+AGG | 0.601062 | 4_4:+63960300 | Msa0694630:CDS |
| GTGGAGATTGCCTCTACACA+AGG | 0.601803 | 4_4:+63962302 | Msa0694630:CDS |
| GTGGAAATTCATATACCAGA+AGG | 0.609129 | 4_4:+63961398 | Msa0694630:CDS |
| TGAAGATGGCGGCGCCACCA+CGG | 0.609547 | 4_4:+63960226 | Msa0694630:CDS |
| CATATATATGATCCAATCAA+GGG | 0.618648 | 4_4:+63961521 | Msa0694630:CDS |
| CAAGAAGGGCAAGTCCACTT+GGG | 0.625978 | 4_4:-63962552 | None:intergenic |
| AGATTCGTTGGATGGTAACG+AGG | 0.637828 | 4_4:-63960423 | None:intergenic |
| GATTAAGACCCGTCGCTCTG+AGG | 0.643030 | 4_4:+63962898 | Msa0694630:CDS |
| GCGAAAACTGACGGTGACGA+AGG | 0.650745 | 4_4:+63960248 | Msa0694630:CDS |
| GCAACTGCAATAGCTGCCGT+AGG | 0.655636 | 4_4:+63962586 | Msa0694630:CDS |
| AGATGGATATGATGAGGATG+GGG | 0.664541 | 4_4:+63961496 | Msa0694630:CDS |
| AATGTGAATTACCCCAAGGA+CGG | 0.664710 | 4_4:+63962275 | Msa0694630:CDS |
| AAGCCAGCATCAATCCCAAG+TGG | 0.668388 | 4_4:+63962538 | Msa0694630:CDS |
| GAATCAGCTTCTGAAGATGG+CGG | 0.676548 | 4_4:+63960215 | Msa0694630:CDS |
| AACAAATGTGAATTACCCCA+AGG | 0.685873 | 4_4:+63962271 | Msa0694630:CDS |
| AAGAATGTTATCAAAACTCG+GGG | 0.686682 | 4_4:-63963226 | None:intergenic |
| TTGTCACAATAGTTAACTGG+TGG | 0.697560 | 4_4:-63961323 | None:intergenic |
| TCTCCACAAAGCCGTCCTTG+GGG | 0.703752 | 4_4:-63962286 | None:intergenic |
| GGAGAGAAATGTCATCAATG+CGG | 0.712891 | 4_4:+63961542 | Msa0694630:CDS |
| CACTGACTAGGACACTGAGT+AGG | 0.718098 | 4_4:+63962990 | Msa0694630:CDS |
| GTATGTAGATGGATATGATG+AGG | 0.739576 | 4_4:+63961490 | Msa0694630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAAATTTTATGTATTAATT+AGG | + | chr4_4:63960654-63960673 | Msa0694630:intron | 10.0% |
| !!! | TAATTTTTTTTATGTTTGAT+TGG | + | chr4_4:63961280-63961299 | Msa0694630:intron | 10.0% |
| !!! | GTTTATCTATTTATTGATTA+TGG | + | chr4_4:63960632-63960651 | Msa0694630:intron | 15.0% |
| !! | ATATTCTATTTAACTAAACA+TGG | + | chr4_4:63961771-63961790 | Msa0694630:intron | 15.0% |
| !! | TATTCTATTTAACTAAACAT+GGG | + | chr4_4:63961772-63961791 | Msa0694630:intron | 15.0% |
| !!! | ATGATGTTTTATATTGAATT+TGG | - | chr4_4:63961857-63961876 | None:intergenic | 15.0% |
| !! | AAATTCAATATAAAACATCA+TGG | + | chr4_4:63961856-63961875 | Msa0694630:intron | 15.0% |
| !!! | AAAATCATTTGTTTTCTTTT+AGG | + | chr4_4:63962218-63962237 | Msa0694630:intron | 15.0% |
| !!! | AAACTTCATTATGTAGTTTT+CGG | - | chr4_4:63960744-63960763 | None:intergenic | 20.0% |
| !! | TCAACTAATAAACATATGTT+TGG | - | chr4_4:63960823-63960842 | None:intergenic | 20.0% |
| !! | CTATCAATTGAAAATCATAT+CGG | - | chr4_4:63960898-63960917 | None:intergenic | 20.0% |
| !! | CCAATAATAGTTAGAAAAAA+TGG | - | chr4_4:63961034-63961053 | None:intergenic | 20.0% |
| !!! | CCATTTTTTCTAACTATTAT+TGG | + | chr4_4:63961031-63961050 | Msa0694630:intron | 20.0% |
| !! | TTCTATCATATCATATACTA+AGG | - | chr4_4:63961148-63961167 | None:intergenic | 20.0% |
| !!! | TAAGTTGTAATAACTTGTAA+TGG | + | chr4_4:63961901-63961920 | Msa0694630:intron | 20.0% |
| !!! | AAGTTGTAATAACTTGTAAT+GGG | + | chr4_4:63961902-63961921 | Msa0694630:intron | 20.0% |
| !! | TACTGGTAATATATACAATA+AGG | + | chr4_4:63962626-63962645 | Msa0694630:CDS | 20.0% |
| !!! | TTGGTTTTCTTATTTTTGTT+TGG | + | chr4_4:63963146-63963165 | Msa0694630:three_prime_UTR | 20.0% |
| !!! | GTTTTAGACTTTTAGTTAAA+TGG | - | chr4_4:63963190-63963209 | None:intergenic | 20.0% |
| ! | TATCACTATTTATTGCTTGT+TGG | + | chr4_4:63960531-63960550 | Msa0694630:intron | 25.0% |
| ! | TTTGGAAAACCCTAAAATTT+CGG | + | chr4_4:63960714-63960733 | Msa0694630:intron | 25.0% |
| !! | CGATATGATTTTCAATTGAT+AGG | + | chr4_4:63960896-63960915 | Msa0694630:intron | 25.0% |
| ! | TTTGAGCTATGGTATATATA+TGG | + | chr4_4:63961234-63961253 | Msa0694630:intron | 25.0% |
| ! | AAAGTTCATCAAGTAAGAAA+AGG | + | chr4_4:63961369-63961388 | Msa0694630:CDS | 25.0% |
| ! | CATATATATGATCCAATCAA+GGG | + | chr4_4:63961521-63961540 | Msa0694630:CDS | 25.0% |
| !! | AGTTGTAATAACTTGTAATG+GGG | + | chr4_4:63961903-63961922 | Msa0694630:intron | 25.0% |
| !! | TAATTCACATTTGTTGCAAT+CGG | - | chr4_4:63962266-63962285 | None:intergenic | 25.0% |
| ! | TTTAGATTCAGATTGAGAAA+AGG | + | chr4_4:63962339-63962358 | Msa0694630:intron | 25.0% |
| !!! | TATACTTGTCATGTTTTAGA+TGG | - | chr4_4:63962434-63962453 | None:intergenic | 25.0% |
| !! | ATTTTCTACTTCTGTATTCT+AGG | + | chr4_4:63962496-63962515 | Msa0694630:intron | 25.0% |
| ! | CAAAGAAAAATGAAGGAAAA+AGG | - | chr4_4:63962764-63962783 | None:intergenic | 25.0% |
| !! | TTTTTCTTTGTCATGTGATT+TGG | + | chr4_4:63962774-63962793 | Msa0694630:intron | 25.0% |
| ! | ACAAGAATGTTATCAAAACT+CGG | - | chr4_4:63963231-63963250 | None:intergenic | 25.0% |
| TCACATACACTTCTGATTAA+AGG | - | chr4_4:63960590-63960609 | None:intergenic | 30.0% | |
| ! | TTCGGATAACCGAAATTTTA+GGG | - | chr4_4:63960726-63960745 | None:intergenic | 30.0% |
| ! | TTTCGGATAACCGAAATTTT+AGG | - | chr4_4:63960727-63960746 | None:intergenic | 30.0% |
| TGACATGTTTGTGTTATGTT+TGG | + | chr4_4:63961057-63961076 | Msa0694630:intron | 30.0% | |
| AAACATGTTACCATTAAGTG+TGG | - | chr4_4:63961202-63961221 | None:intergenic | 30.0% | |
| AGCTATGGTATATATATGGT+TGG | + | chr4_4:63961238-63961257 | Msa0694630:intron | 30.0% | |
| TTCATCAAGTAAGAAAAGGA+AGG | + | chr4_4:63961373-63961392 | Msa0694630:CDS | 30.0% | |
| CCTTGATTGGATCATATATA+TGG | - | chr4_4:63961523-63961542 | None:intergenic | 30.0% | |
| CCATATATATGATCCAATCA+AGG | + | chr4_4:63961520-63961539 | Msa0694630:CDS | 30.0% | |
| ! | TGTTTCAGAATAAAGTGTCA+TGG | - | chr4_4:63961665-63961684 | None:intergenic | 30.0% |
| !! | TGACACTTTATTCTGAAACA+AGG | + | chr4_4:63961665-63961684 | Msa0694630:intron | 30.0% |
| ! | TTACTAGTTTGCCAAAAGAA+AGG | + | chr4_4:63961737-63961756 | Msa0694630:intron | 30.0% |
| ! | GTTGTAATAACTTGTAATGG+GGG | + | chr4_4:63961904-63961923 | Msa0694630:intron | 30.0% |
| !!! | TGCCATAGCCAATTTTTTAA+TGG | + | chr4_4:63961962-63961981 | Msa0694630:intron | 30.0% |
| !!! | GCCATAGCCAATTTTTTAAT+GGG | + | chr4_4:63961963-63961982 | Msa0694630:intron | 30.0% |
| TCCCATTAAAAAATTGGCTA+TGG | - | chr4_4:63961967-63961986 | None:intergenic | 30.0% | |
| !!! | TTGGTTCTATGCTTTTTAAG+TGG | + | chr4_4:63962065-63962084 | Msa0694630:intron | 30.0% |
| ! | TACCTTAGTAGAACAGTTTT+AGG | + | chr4_4:63962091-63962110 | Msa0694630:intron | 30.0% |
| ATCTCGTTAATGCATAAAGT+TGG | + | chr4_4:63962141-63962160 | Msa0694630:intron | 30.0% | |
| TCAGAGAAACAAGTAACATA+TGG | - | chr4_4:63962180-63962199 | None:intergenic | 30.0% | |
| AATAATGTTACCTTGTGTAG+AGG | - | chr4_4:63962315-63962334 | None:intergenic | 30.0% | |
| ! | TATACAATAAGGTTAGTCAC+AGG | + | chr4_4:63962637-63962656 | Msa0694630:intron | 30.0% |
| GAAGATAGAACTGAATAGAA+GGG | - | chr4_4:63962684-63962703 | None:intergenic | 30.0% | |
| AGAAGATAGAACTGAATAGA+AGG | - | chr4_4:63962685-63962704 | None:intergenic | 30.0% | |
| TTTCGCTTCACATTCTTTAA+AGG | + | chr4_4:63962736-63962755 | Msa0694630:intron | 30.0% | |
| CACATGACAAAGAAAAATGA+AGG | - | chr4_4:63962771-63962790 | None:intergenic | 30.0% | |
| ! | AAGATGGTGATACTATGTTT+TGG | + | chr4_4:63963107-63963126 | Msa0694630:three_prime_UTR | 30.0% |
| AAGAATGTTATCAAAACTCG+GGG | - | chr4_4:63963229-63963248 | None:intergenic | 30.0% | |
| CAAGAATGTTATCAAAACTC+GGG | - | chr4_4:63963230-63963249 | None:intergenic | 30.0% | |
| !! | CTTGGTTTGTTAAAGCTTTC+TGG | + | chr4_4:63960353-63960372 | Msa0694630:CDS | 35.0% |
| ! | TAACGAGGAGTTTTTCTTGA+CGG | - | chr4_4:63960411-63960430 | None:intergenic | 35.0% |
| GTCTGATGAAATCATGTGTT+TGG | + | chr4_4:63960696-63960715 | Msa0694630:intron | 35.0% | |
| ACAAATCTGATGAAATCGTG+CGG | + | chr4_4:63960850-63960869 | Msa0694630:intron | 35.0% | |
| ! | GCTACATCGATTAAACAATG+CGG | - | chr4_4:63961176-63961195 | None:intergenic | 35.0% |
| ATGTTACCATTAAGTGTGGT+CGG | - | chr4_4:63961198-63961217 | None:intergenic | 35.0% | |
| !! | ATTCTGTGTTGTTTGAGCTA+TGG | + | chr4_4:63961223-63961242 | Msa0694630:intron | 35.0% |
| ACAATAGTTAACTGGTGGTA+GGG | - | chr4_4:63961321-63961340 | None:intergenic | 35.0% | |
| TTGTCACAATAGTTAACTGG+TGG | - | chr4_4:63961326-63961345 | None:intergenic | 35.0% | |
| AAGTAAGAAAAGGAAGGAAG+TGG | + | chr4_4:63961379-63961398 | Msa0694630:CDS | 35.0% | |
| GTGGAAATTCATATACCAGA+AGG | + | chr4_4:63961398-63961417 | Msa0694630:CDS | 35.0% | |
| GCTCTTCAGTGTAAATTTCA+GGG | - | chr4_4:63961430-63961449 | None:intergenic | 35.0% | |
| TGCTCTTCAGTGTAAATTTC+AGG | - | chr4_4:63961431-63961450 | None:intergenic | 35.0% | |
| GATTGGGAATTGTATGTAGA+TGG | + | chr4_4:63961479-63961498 | Msa0694630:CDS | 35.0% | |
| GTATGTAGATGGATATGATG+AGG | + | chr4_4:63961490-63961509 | Msa0694630:CDS | 35.0% | |
| TAGATGGATATGATGAGGAT+GGG | + | chr4_4:63961495-63961514 | Msa0694630:CDS | 35.0% | |
| CTAAAAACCCTTCGATTCAT+AGG | - | chr4_4:63961630-63961649 | None:intergenic | 35.0% | |
| GTTTGCCAAAAGAAAGGAAA+AGG | + | chr4_4:63961743-63961762 | Msa0694630:intron | 35.0% | |
| ! | GCTTTCCTTTTCCTTTCTTT+TGG | - | chr4_4:63961751-63961770 | None:intergenic | 35.0% |
| ATGGGTGATATAAGATGCAA+TGG | + | chr4_4:63961790-63961809 | Msa0694630:intron | 35.0% | |
| TGGGTGATATAAGATGCAAT+GGG | + | chr4_4:63961791-63961810 | Msa0694630:intron | 35.0% | |
| CATAGAACCAATGTTGTCTA+TGG | - | chr4_4:63962056-63962075 | None:intergenic | 35.0% | |
| TGCCTAAAACTGTTCTACTA+AGG | - | chr4_4:63962096-63962115 | None:intergenic | 35.0% | |
| AACAAATGTGAATTACCCCA+AGG | + | chr4_4:63962271-63962290 | Msa0694630:CDS | 35.0% | |
| CTACTTCTGTATTCTAGGTA+TGG | + | chr4_4:63962501-63962520 | Msa0694630:intron | 35.0% | |
| TGCAAATTTCTCGACAAGAA+GGG | - | chr4_4:63962569-63962588 | None:intergenic | 35.0% | |
| TTGCAAATTTCTCGACAAGA+AGG | - | chr4_4:63962570-63962589 | None:intergenic | 35.0% | |
| AAAAATGGTTGGATGCATAC+TGG | + | chr4_4:63962609-63962628 | Msa0694630:CDS | 35.0% | |
| ! | CTTTGTCATGTGATTTGGAA+TGG | + | chr4_4:63962779-63962798 | Msa0694630:intron | 35.0% |
| CCTTACAAACACAGATGAAA+AGG | - | chr4_4:63962841-63962860 | None:intergenic | 35.0% | |
| ! | CCTTTTCATCTGTGTTTGTA+AGG | + | chr4_4:63962838-63962857 | Msa0694630:intron | 35.0% |
| TGTTTGTAAGGTGACGAAAT+TGG | + | chr4_4:63962850-63962869 | Msa0694630:intron | 35.0% | |
| GTTTGTAAGGTGACGAAATT+GGG | + | chr4_4:63962851-63962870 | Msa0694630:intron | 35.0% | |
| AGAGATCTCTGGTATTTCTT+TGG | - | chr4_4:63962960-63962979 | None:intergenic | 35.0% | |
| AGAACAGAAACATGCCTTAA+TGG | + | chr4_4:63963068-63963087 | Msa0694630:three_prime_UTR | 35.0% | |
| TGTAGATGTACAAGCCATTA+AGG | - | chr4_4:63963085-63963104 | None:intergenic | 35.0% | |
| TGGATATGAAGACAAGTTGT+TGG | + | chr4_4:63963127-63963146 | Msa0694630:three_prime_UTR | 35.0% | |
| TTTAGTTAAATGGCCTAAGC+TGG | - | chr4_4:63963180-63963199 | None:intergenic | 35.0% | |
| !! | AGCAGTTTTACAGAGCATTA+AGG | + | chr4_4:63963271-63963290 | Msa0694630:three_prime_UTR | 35.0% |
| !! | GCAGTTTTACAGAGCATTAA+GGG | + | chr4_4:63963272-63963291 | Msa0694630:three_prime_UTR | 35.0% |
| ! | GAAGAATCAGCTTCTGAAGA+TGG | + | chr4_4:63960212-63960231 | Msa0694630:CDS | 40.0% |
| CATCGCATTACGAACAGATT+CGG | + | chr4_4:63960291-63960310 | Msa0694630:CDS | 40.0% | |
| ATCGCATTACGAACAGATTC+GGG | + | chr4_4:63960292-63960311 | Msa0694630:CDS | 40.0% | |
| AGAACGTCTTTCAGATTCGT+TGG | - | chr4_4:63960438-63960457 | None:intergenic | 40.0% | |
| CTGAAAGACGTTCTTCTTCT+AGG | + | chr4_4:63960444-63960463 | Msa0694630:CDS | 40.0% | |
| CAAATCTGATGAAATCGTGC+GGG | + | chr4_4:63960851-63960870 | Msa0694630:intron | 40.0% | |
| ! | TGTGAAGTGTCAGTACTATC+AGG | - | chr4_4:63960952-63960971 | None:intergenic | 40.0% |
| ATGATTGAATGTAGCCACGT+GGG | - | chr4_4:63961010-63961029 | None:intergenic | 40.0% | |
| AATGATTGAATGTAGCCACG+TGG | - | chr4_4:63961011-63961030 | None:intergenic | 40.0% | |
| CACAATAGTTAACTGGTGGT+AGG | - | chr4_4:63961322-63961341 | None:intergenic | 40.0% | |
| CGCTTGTCACAATAGTTAAC+TGG | - | chr4_4:63961329-63961348 | None:intergenic | 40.0% | |
| TAGGAGATTGTGAGACTGAT+TGG | + | chr4_4:63961462-63961481 | Msa0694630:CDS | 40.0% | |
| AGGAGATTGTGAGACTGATT+GGG | + | chr4_4:63961463-63961482 | Msa0694630:CDS | 40.0% | |
| GTAGATGGATATGATGAGGA+TGG | + | chr4_4:63961494-63961513 | Msa0694630:CDS | 40.0% | |
| AGATGGATATGATGAGGATG+GGG | + | chr4_4:63961496-63961515 | Msa0694630:CDS | 40.0% | |
| TGACATTTCTCTCCCTTGAT+TGG | - | chr4_4:63961536-63961555 | None:intergenic | 40.0% | |
| GGAGAGAAATGTCATCAATG+CGG | + | chr4_4:63961542-63961561 | Msa0694630:CDS | 40.0% | |
| GAGAGAAATGTCATCAATGC+GGG | + | chr4_4:63961543-63961562 | Msa0694630:CDS | 40.0% | |
| TGTCATCAATGCGGGTATTA+TGG | + | chr4_4:63961551-63961570 | Msa0694630:intron | 40.0% | |
| GGGTGATATAAGATGCAATG+GGG | + | chr4_4:63961792-63961811 | Msa0694630:intron | 40.0% | |
| GGTGATATAAGATGCAATGG+GGG | + | chr4_4:63961793-63961812 | Msa0694630:intron | 40.0% | |
| !!! | ATGGCTTGGTGGATTTTAAG+AGG | + | chr4_4:63961825-63961844 | Msa0694630:intron | 40.0% |
| !!! | TGGTGGATTTTAAGAGGAGA+TGG | + | chr4_4:63961831-63961850 | Msa0694630:intron | 40.0% |
| CGGGCATCCCATTAAAAAAT+TGG | - | chr4_4:63961973-63961992 | None:intergenic | 40.0% | |
| AAACCATATAAGCACACCAG+TGG | - | chr4_4:63962013-63962032 | None:intergenic | 40.0% | |
| AGAACCAATGTTGTCTATGG+TGG | - | chr4_4:63962053-63962072 | None:intergenic | 40.0% | |
| ! | TCTTTTAGGCGCTTAACTGT+TGG | + | chr4_4:63962232-63962251 | Msa0694630:intron | 40.0% |
| AATGTGAATTACCCCAAGGA+CGG | + | chr4_4:63962275-63962294 | Msa0694630:CDS | 40.0% | |
| TAGATGGAGTTAACTCATCG+AGG | - | chr4_4:63962418-63962437 | None:intergenic | 40.0% | |
| AATAGCTGCCGTAGGAAAAA+TGG | + | chr4_4:63962594-63962613 | Msa0694630:CDS | 40.0% | |
| !! | GCATCCAACCATTTTTCCTA+CGG | - | chr4_4:63962605-63962624 | None:intergenic | 40.0% |
| CAGTTCTATCTTCTTCAGTG+TGG | + | chr4_4:63962691-63962710 | Msa0694630:intron | 40.0% | |
| ! | GTCATGTGATTTGGAATGGA+AGG | + | chr4_4:63962783-63962802 | Msa0694630:intron | 40.0% |
| TGGAATGGAAGGCTAAGATA+TGG | + | chr4_4:63962794-63962813 | Msa0694630:intron | 40.0% | |
| !! | AGGGCTCTGAGAAGTTAAAT+AGG | + | chr4_4:63963028-63963047 | Msa0694630:exon | 40.0% |
| CTTGTACATCTACACGAAGA+TGG | + | chr4_4:63963091-63963110 | Msa0694630:three_prime_UTR | 40.0% | |
| TTTGGATTCAATGCCAGCTT+AGG | + | chr4_4:63963164-63963183 | Msa0694630:three_prime_UTR | 40.0% | |
| TTATCAAAACTCGGGGCATA+GGG | - | chr4_4:63963222-63963241 | None:intergenic | 40.0% | |
| ! | GAATCAGCTTCTGAAGATGG+CGG | + | chr4_4:63960215-63960234 | Msa0694630:CDS | 45.0% |
| ACGAACAGATTCGGGAACAA+AGG | + | chr4_4:63960300-63960319 | Msa0694630:CDS | 45.0% | |
| GCTGAGAGAATGCATAAGCT+TGG | + | chr4_4:63960335-63960354 | Msa0694630:CDS | 45.0% | |
| ! | AGGAGTTTTTCTTGACGGAG+GGG | - | chr4_4:63960406-63960425 | None:intergenic | 45.0% |
| ! | GAGGAGTTTTTCTTGACGGA+GGG | - | chr4_4:63960407-63960426 | None:intergenic | 45.0% |
| ! | AGATTCGTTGGATGGTAACG+AGG | - | chr4_4:63960426-63960445 | None:intergenic | 45.0% |
| CGTCTTTCAGATTCGTTGGA+TGG | - | chr4_4:63960434-63960453 | None:intergenic | 45.0% | |
| TCGGTCTCAGTGAATGTATG+AGG | - | chr4_4:63960879-63960898 | None:intergenic | 45.0% | |
| ATGTAGCCGACCACACTTAA+TGG | + | chr4_4:63961189-63961208 | Msa0694630:intron | 45.0% | |
| CTTTCTTGACGCTCTGCTTT+AGG | - | chr4_4:63961353-63961372 | None:intergenic | 45.0% | |
| ATTTCAGGGTTTGTGCCTTC+TGG | - | chr4_4:63961416-63961435 | None:intergenic | 45.0% | |
| ACCCTTCGATTCATAGGTGA+GGG | - | chr4_4:63961624-63961643 | None:intergenic | 45.0% | |
| AACCCTTCGATTCATAGGTG+AGG | - | chr4_4:63961625-63961644 | None:intergenic | 45.0% | |
| ! | CCAATGTTGTCTATGGTGGA+AGG | - | chr4_4:63962049-63962068 | None:intergenic | 45.0% |
| CCTTCCACCATAGACAACAT+TGG | + | chr4_4:63962046-63962065 | Msa0694630:intron | 45.0% | |
| GTTGAATCTGGAGAGATCTC+TGG | - | chr4_4:63962971-63962990 | None:intergenic | 45.0% | |
| ! | CTCCAGATTCAACACTGACT+AGG | + | chr4_4:63962978-63962997 | Msa0694630:CDS | 45.0% |
| ! | GTCCTAGTCAGTGTTGAATC+TGG | - | chr4_4:63962983-63963002 | None:intergenic | 45.0% |
| GTTATCAAAACTCGGGGCAT+AGG | - | chr4_4:63963223-63963242 | None:intergenic | 45.0% | |
| GAATGGGAACTCGTCGTAGA+AGG | + | chr4_4:63960177-63960196 | Msa0694630:exon | 50.0% | |
| !! | GACGAAGGTGTTGTCGTTTC+AGG | + | chr4_4:63960263-63960282 | Msa0694630:CDS | 50.0% |
| !!! | GCGGTGTTGGTGTTTTCTTG+AGG | - | chr4_4:63960382-63960401 | None:intergenic | 50.0% |
| ! | CGAGGAGTTTTTCTTGACGG+AGG | - | chr4_4:63960408-63960427 | None:intergenic | 50.0% |
| TTGAATGTAGCCACGTGGGT+TGG | - | chr4_4:63961006-63961025 | None:intergenic | 50.0% | |
| ! | GAAGAGCATGAGAAGCTGCT+AGG | + | chr4_4:63961443-63961462 | Msa0694630:CDS | 50.0% |
| TGCCCTCACCTATGAATCGA+AGG | + | chr4_4:63961619-63961638 | Msa0694630:intron | 50.0% | |
| GCCCTCACCTATGAATCGAA+GGG | + | chr4_4:63961620-63961639 | Msa0694630:intron | 50.0% | |
| ! | GTAATGGGGGCATGACAGAA+TGG | + | chr4_4:63961917-63961936 | Msa0694630:intron | 50.0% |
| CCATATAAGCACACCAGTGG+TGG | - | chr4_4:63962010-63962029 | None:intergenic | 50.0% | |
| CCACCACTGGTGTGCTTATA+TGG | + | chr4_4:63962007-63962026 | Msa0694630:intron | 50.0% | |
| ATCTCCACAAAGCCGTCCTT+GGG | - | chr4_4:63962290-63962309 | None:intergenic | 50.0% | |
| AATCTCCACAAAGCCGTCCT+TGG | - | chr4_4:63962291-63962310 | None:intergenic | 50.0% | |
| GTGGAGATTGCCTCTACACA+AGG | + | chr4_4:63962302-63962321 | Msa0694630:CDS | 50.0% | |
| AAGCCAGCATCAATCCCAAG+TGG | + | chr4_4:63962538-63962557 | Msa0694630:CDS | 50.0% | |
| AGTCCACTTGGGATTGATGC+TGG | - | chr4_4:63962544-63962563 | None:intergenic | 50.0% | |
| CAAGAAGGGCAAGTCCACTT+GGG | - | chr4_4:63962555-63962574 | None:intergenic | 50.0% | |
| ACAAGAAGGGCAAGTCCACT+TGG | - | chr4_4:63962556-63962575 | None:intergenic | 50.0% | |
| GCTGCCGTAGGAAAAATGGT+TGG | + | chr4_4:63962598-63962617 | Msa0694630:CDS | 50.0% | |
| ! | GAGGAAAGCATGGAAGGATC+AGG | + | chr4_4:63962917-63962936 | Msa0694630:CDS | 50.0% |
| ! | CACTGACTAGGACACTGAGT+AGG | + | chr4_4:63962990-63963009 | Msa0694630:CDS | 50.0% |
| GGACACTGAGTAGGCCAATT+CGG | + | chr4_4:63962999-63963018 | Msa0694630:CDS | 50.0% | |
| TAGGCCAATTCGGACGAGAA+GGG | + | chr4_4:63963009-63963028 | Msa0694630:CDS | 50.0% | |
| GCGAAAACTGACGGTGACGA+AGG | + | chr4_4:63960248-63960267 | Msa0694630:CDS | 55.0% | |
| ! | TTTTTCTTGACGGAGGGGCG+CGG | - | chr4_4:63960401-63960420 | None:intergenic | 55.0% |
| GACATTGACACCAACCCACG+TGG | + | chr4_4:63960993-63961012 | Msa0694630:intron | 55.0% | |
| ! | GCAATGGGGGCATGACAGAA+TGG | + | chr4_4:63961806-63961825 | Msa0694630:intron | 55.0% |
| ! | GGCATGACAGAATGGCTTGG+TGG | + | chr4_4:63961814-63961833 | Msa0694630:intron | 55.0% |
| ! | GGCATGACAGAATGGCTTGG+TGG | + | chr4_4:63961814-63961833 | Msa0694630:intron | 55.0% |
| TTACCCCAAGGACGGCTTTG+TGG | + | chr4_4:63962283-63962302 | Msa0694630:CDS | 55.0% | |
| TCTCCACAAAGCCGTCCTTG+GGG | - | chr4_4:63962289-63962308 | None:intergenic | 55.0% | |
| GCAACTGCAATAGCTGCCGT+AGG | + | chr4_4:63962586-63962605 | Msa0694630:CDS | 55.0% | |
| GATTAAGACCCGTCGCTCTG+AGG | + | chr4_4:63962898-63962917 | Msa0694630:CDS | 55.0% | |
| CATGCTTTCCTCAGAGCGAC+GGG | - | chr4_4:63962909-63962928 | None:intergenic | 55.0% | |
| CCATGCTTTCCTCAGAGCGA+CGG | - | chr4_4:63962910-63962929 | None:intergenic | 55.0% | |
| !! | CGCTCTGAGGAAAGCATGGA+AGG | + | chr4_4:63962911-63962930 | Msa0694630:CDS | 55.0% |
| GTAGGCCAATTCGGACGAGA+AGG | + | chr4_4:63963008-63963027 | Msa0694630:CDS | 55.0% | |
| AGAGCCCTTCTCGTCCGAAT+TGG | - | chr4_4:63963016-63963035 | None:intergenic | 55.0% | |
| GCCACCACGGCGAAAACTGA+CGG | + | chr4_4:63960239-63960258 | Msa0694630:CDS | 60.0% | |
| ! | ACCGTCAGTTTTCGCCGTGG+TGG | - | chr4_4:63960243-63960262 | None:intergenic | 60.0% |
| ! | GTCACCGTCAGTTTTCGCCG+TGG | - | chr4_4:63960246-63960265 | None:intergenic | 60.0% |
| ! | GGGGGCATGACAGAATGGCT+TGG | + | chr4_4:63961811-63961830 | Msa0694630:intron | 60.0% |
| ! | GGGGGCATGACAGAATGGCT+TGG | + | chr4_4:63961811-63961830 | Msa0694630:intron | 60.0% |
| TAATGGGATGCCCGCCGTCA+TGG | + | chr4_4:63961979-63961998 | Msa0694630:intron | 60.0% | |
| !! | CCGTCGCTCTGAGGAAAGCA+TGG | + | chr4_4:63962907-63962926 | Msa0694630:CDS | 60.0% |
| ! | TGAAGATGGCGGCGCCACCA+CGG | + | chr4_4:63960226-63960245 | Msa0694630:CDS | 65.0% |
| !! | CAGTGGTGGTGCCGCCATGA+CGG | - | chr4_4:63961996-63962015 | None:intergenic | 65.0% |
| ! | TTGACGGAGGGGCGCGGTGT+TGG | - | chr4_4:63960395-63960414 | None:intergenic | 70.0% |
| TGGGATGCCCGCCGTCATGG+CGG | + | chr4_4:63961982-63962001 | Msa0694630:intron | 70.0% | |
| !! | TGGTGGTGCCGCCATGACGG+CGG | - | chr4_4:63961993-63962012 | None:intergenic | 70.0% |
| CGTCATGGCGGCACCACCAC+TGG | + | chr4_4:63961994-63962013 | Msa0694630:intron | 70.0% | |
| !! | GGTGGTGCCGCCATGACGGC+GGG | - | chr4_4:63961992-63962011 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 63960175 | 63963330 | 63960175 | ID=Msa0694630;Name=Msa0694630 |
| chr4_4 | mRNA | 63960175 | 63963330 | 63960175 | ID=Msa0694630-mRNA-1;Parent=Msa0694630;Name=Msa0694630-mRNA-1;_AED=0.01;_eAED=0.01;_QI=4|1|1|1|1|1|5|285|313 |
| chr4_4 | exon | 63960175 | 63960465 | 63960175 | ID=Msa0694630-mRNA-1:exon:18145;Parent=Msa0694630-mRNA-1 |
| chr4_4 | exon | 63961310 | 63961564 | 63961310 | ID=Msa0694630-mRNA-1:exon:18146;Parent=Msa0694630-mRNA-1 |
| chr4_4 | exon | 63962240 | 63962323 | 63962240 | ID=Msa0694630-mRNA-1:exon:18147;Parent=Msa0694630-mRNA-1 |
| chr4_4 | exon | 63962518 | 63962647 | 63962518 | ID=Msa0694630-mRNA-1:exon:18148;Parent=Msa0694630-mRNA-1 |
| chr4_4 | exon | 63962860 | 63963330 | 63962860 | ID=Msa0694630-mRNA-1:exon:18149;Parent=Msa0694630-mRNA-1 |
| chr4_4 | five_prime_UTR | 63960175 | 63960178 | 63960175 | ID=Msa0694630-mRNA-1:five_prime_utr;Parent=Msa0694630-mRNA-1 |
| chr4_4 | CDS | 63960179 | 63960465 | 63960179 | ID=Msa0694630-mRNA-1:cds;Parent=Msa0694630-mRNA-1 |
| chr4_4 | CDS | 63961310 | 63961564 | 63961310 | ID=Msa0694630-mRNA-1:cds;Parent=Msa0694630-mRNA-1 |
| chr4_4 | CDS | 63962240 | 63962323 | 63962240 | ID=Msa0694630-mRNA-1:cds;Parent=Msa0694630-mRNA-1 |
| chr4_4 | CDS | 63962518 | 63962647 | 63962518 | ID=Msa0694630-mRNA-1:cds;Parent=Msa0694630-mRNA-1 |
| chr4_4 | CDS | 63962860 | 63963045 | 63962860 | ID=Msa0694630-mRNA-1:cds;Parent=Msa0694630-mRNA-1 |
| chr4_4 | three_prime_UTR | 63963046 | 63963330 | 63963046 | ID=Msa0694630-mRNA-1:three_prime_utr;Parent=Msa0694630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
