Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652070 | XP_003608058.1 | 93.046 | 302 | 14 | 3 | 17 | 313 | 20 | 319 | 0.0 | 557 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652070 | sp|Q922M5|CDA7L_MOUSE | 44.118 | 102 | 55 | 1 | 166 | 265 | 330 | 431 | 9.87e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016040 | Msa0652070 | 0.801992 | 6.930356e-49 | -8.615850e-47 |
| Msa0025580 | Msa0652070 | 0.814731 | 1.326940e-51 | -8.615850e-47 |
| Msa0035140 | Msa0652070 | 0.819221 | 1.301137e-52 | -8.615850e-47 |
| Msa0053070 | Msa0652070 | 0.815276 | 1.004523e-51 | -8.615850e-47 |
| Msa0606100 | Msa0652070 | 0.835356 | 1.760447e-56 | -8.615850e-47 |
| Msa0611920 | Msa0652070 | 0.872752 | 2.497323e-67 | -8.615850e-47 |
| Msa0621710 | Msa0652070 | 0.806970 | 6.351396e-50 | -8.615850e-47 |
| Msa0652070 | Msa0694630 | 0.965248 | 2.329697e-124 | -8.615850e-47 |
| Msa0652070 | Msa0703600 | 0.800080 | 1.704347e-48 | -8.615850e-47 |
| Msa0652070 | Msa0709200 | 0.803174 | 3.954259e-49 | -8.615850e-47 |
| Msa0652070 | Msa0747740 | 0.814099 | 1.830629e-51 | -8.615850e-47 |
| Msa0652070 | Msa0756590 | 0.802478 | 5.503887e-49 | -8.615850e-47 |
| Msa0652070 | Msa0773630 | 0.828962 | 6.715640e-55 | -8.615850e-47 |
| Msa0652070 | Msa0800660 | 0.823029 | 1.725589e-53 | -8.615850e-47 |
| Msa0652070 | Msa0818880 | 0.807910 | 4.012715e-50 | -8.615850e-47 |
| Msa0652070 | Msa0863620 | 0.820178 | 7.869942e-53 | -8.615850e-47 |
| Msa0652070 | Msa0900760 | 0.800487 | 1.408391e-48 | -8.615850e-47 |
| Msa0652070 | Msa0909760 | 0.813165 | 2.938796e-51 | -8.615850e-47 |
| Msa0652070 | Msa0966320 | 0.813969 | 1.955133e-51 | -8.615850e-47 |
| Msa0652070 | Msa0966480 | 0.815466 | 9.113397e-52 | -8.615850e-47 |
| Msa0652070 | Msa1037540 | 0.800859 | 1.182766e-48 | -8.615850e-47 |
| Msa0652070 | Msa1042880 | 0.808193 | 3.492748e-50 | -8.615850e-47 |
| Msa0652070 | Msa1078880 | 0.807776 | 4.285525e-50 | -8.615850e-47 |
| Msa0652070 | Msa1078970 | 0.812666 | 3.779891e-51 | -8.615850e-47 |
| Msa0652070 | Msa1084530 | 0.806787 | 6.941570e-50 | -8.615850e-47 |
| Msa0652070 | Msa1114630 | 0.800789 | 1.222059e-48 | -8.615850e-47 |
| Msa0652070 | Msa1116660 | 0.815684 | 8.147963e-52 | -8.615850e-47 |
| Msa0652070 | Msa1125820 | 0.807920 | 3.993309e-50 | -8.615850e-47 |
| Msa0652070 | Msa1125990 | 0.806699 | 7.247496e-50 | -8.615850e-47 |
| Msa0652070 | Msa1132530 | 0.808203 | 3.476574e-50 | -8.615850e-47 |
| Msa0652070 | Msa1162880 | 0.803104 | 4.087261e-49 | -8.615850e-47 |
| Msa0652070 | Msa1169190 | 0.802085 | 6.630737e-49 | -8.615850e-47 |
| Msa0652070 | Msa1214350 | 0.811315 | 7.446576e-51 | -8.615850e-47 |
| Msa0652070 | Msa1244240 | 0.819358 | 1.211285e-52 | -8.615850e-47 |
| Msa0652070 | Msa1446100 | 0.806080 | 9.786684e-50 | -8.615850e-47 |
| Msa0652070 | Msa1447170 | 0.847583 | 1.055178e-59 | -8.615850e-47 |
| Msa0121330 | Msa0652070 | 0.801860 | 7.375201e-49 | -8.615850e-47 |
| Msa0140280 | Msa0652070 | 0.807910 | 4.012719e-50 | -8.615850e-47 |
| Msa0367520 | Msa0652070 | 0.814518 | 1.478930e-51 | -8.615850e-47 |
| Msa0389950 | Msa0652070 | 0.829925 | 3.917499e-55 | -8.615850e-47 |
| Msa0430300 | Msa0652070 | 0.803695 | 3.083440e-49 | -8.615850e-47 |
| Msa0476280 | Msa0652070 | 0.803017 | 4.260064e-49 | -8.615850e-47 |
| Msa0556540 | Msa0652070 | 0.972361 | 1.219347e-134 | -8.615850e-47 |
| Msa0563740 | Msa0652070 | 0.805538 | 1.271955e-49 | -8.615850e-47 |
| Msa0567170 | Msa0652070 | 0.813051 | 3.112626e-51 | -8.615850e-47 |
| Msa0577330 | Msa0652070 | 0.801602 | 8.333358e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652070 | MtrunA17_Chr4g0045521 | 93.046 | 302 | 14 | 3 | 17 | 313 | 20 | 319 | 0.0 | 557 |
| Msa0652070 | MtrunA17_Chr5g0402951 | 50.617 | 243 | 108 | 3 | 39 | 276 | 29 | 264 | 2.07e-78 | 244 |
| Msa0652070 | MtrunA17_Chr5g0402961 | 50.000 | 240 | 107 | 2 | 39 | 272 | 30 | 262 | 1.70e-69 | 221 |
| Msa0652070 | MtrunA17_Chr6g0479091 | 28.421 | 285 | 149 | 10 | 37 | 266 | 7 | 291 | 8.72e-17 | 79.3 |
| Msa0652070 | MtrunA17_Chr6g0457221 | 36.066 | 122 | 67 | 3 | 165 | 280 | 34 | 150 | 1.18e-16 | 80.5 |
| Msa0652070 | MtrunA17_Chr6g0457161 | 33.088 | 136 | 74 | 4 | 165 | 288 | 43 | 173 | 5.17e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652070 | AT2G23530.1 | 49.796 | 245 | 97 | 5 | 39 | 271 | 29 | 259 | 1.08e-71 | 231 |
| Msa0652070 | AT4G37110.1 | 45.385 | 260 | 115 | 5 | 39 | 276 | 29 | 283 | 9.83e-69 | 220 |
| Msa0652070 | AT4G37110.2 | 47.773 | 247 | 115 | 5 | 39 | 276 | 29 | 270 | 5.03e-68 | 218 |
| Msa0652070 | AT4G37110.3 | 51.099 | 182 | 83 | 3 | 96 | 276 | 12 | 188 | 3.50e-61 | 197 |
| Msa0652070 | AT4G37110.4 | 51.099 | 182 | 83 | 3 | 96 | 276 | 12 | 188 | 3.50e-61 | 197 |
| Msa0652070 | AT1G67780.2 | 34.307 | 137 | 71 | 3 | 165 | 295 | 23 | 146 | 1.08e-16 | 80.9 |
| Msa0652070 | AT1G67780.1 | 34.307 | 137 | 71 | 3 | 165 | 295 | 23 | 146 | 1.08e-16 | 80.9 |
| Msa0652070 | AT5G38690.2 | 37.624 | 101 | 60 | 1 | 168 | 265 | 23 | 123 | 4.21e-14 | 73.2 |
| Msa0652070 | AT5G38690.1 | 37.624 | 101 | 60 | 1 | 168 | 265 | 23 | 123 | 4.21e-14 | 73.2 |
| Msa0652070 | AT1G67270.1 | 36.538 | 104 | 63 | 1 | 165 | 265 | 15 | 118 | 1.24e-13 | 71.6 |
Find 92 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTTTGTTAAAGCTTTC+TGG | 0.081932 | 4_3:+59771234 | Msa0652070:CDS |
| GACGAAGGTGTTGTCGTTTC+AGG | 0.147931 | 4_3:+59771144 | Msa0652070:CDS |
| CTGAAAGACGTTCTTCTTCT+AGG | 0.197268 | 4_3:+59771325 | Msa0652070:CDS |
| CTTTCTTGACGCTCTGCTTT+AGG | 0.267050 | 4_3:-59772242 | None:intergenic |
| ACTTCAGGGTTTGTGCCTTC+TGG | 0.274892 | 4_3:-59772305 | None:intergenic |
| TGCTCTTCAGTGTAAACTTC+AGG | 0.282121 | 4_3:-59772320 | None:intergenic |
| AGAACAGAAACATGCCTTAA+TGG | 0.296929 | 4_3:+59773960 | Msa0652070:three_prime_UTR |
| AGAGATCTCTGGTATTTCTT+TGG | 0.321827 | 4_3:-59773849 | None:intergenic |
| TGTTTGTAAGGTGACGAAAT+TGG | 0.331250 | 4_3:+59773742 | Msa0652070:intron |
| TGACATTTCTCTCCCTTGAT+TGG | 0.343032 | 4_3:-59772425 | None:intergenic |
| TGTAGATGTACAAGCCATTA+AGG | 0.354364 | 4_3:-59773974 | None:intergenic |
| ATCTCCACAAAGCCGTCCTT+GGG | 0.359404 | 4_3:-59773179 | None:intergenic |
| TACTGGTAATATATACAATA+AGG | 0.364939 | 4_3:+59773518 | Msa0652070:CDS |
| CCTTGATTGGATCATATATA+TGG | 0.370088 | 4_3:-59772412 | None:intergenic |
| AAGATGGTGATACTATGTTT+TGG | 0.372791 | 4_3:+59773999 | Msa0652070:three_prime_UTR |
| AGGGCTCTGAGAAGTTAAAT+AGG | 0.387414 | 4_3:+59773920 | Msa0652070:exon |
| GCTGAGAGAGTGTGAGAGAA+TGG | 0.391361 | 4_3:+59771041 | None:intergenic |
| GATTGGGAATTGTATGTAGA+TGG | 0.394321 | 4_3:+59772371 | Msa0652070:CDS |
| GAATGGGAACTCGTCGTAGA+AGG | 0.402667 | 4_3:+59771058 | Msa0652070:exon |
| TAGGAGATTGTGAGACTGAT+TGG | 0.407394 | 4_3:+59772354 | Msa0652070:CDS |
| GTCCTAGTCAGTGTTGAATC+TGG | 0.411891 | 4_3:-59773872 | None:intergenic |
| CGCTTGTCACAATAGTTAAC+TGG | 0.416480 | 4_3:-59772218 | None:intergenic |
| TGGATATGAAGACAAGTTGT+TGG | 0.417896 | 4_3:+59774019 | Msa0652070:three_prime_UTR |
| TTGACGGAGGGGCGCGGTGT+TGG | 0.424322 | 4_3:-59771273 | None:intergenic |
| AATCTCCACAAAGCCGTCCT+TGG | 0.429942 | 4_3:-59773180 | None:intergenic |
| CATCGCATTACGAACAGATT+CGG | 0.430803 | 4_3:+59771172 | Msa0652070:CDS |
| AGAGCCCTTCTCGTCCGAAT+TGG | 0.433546 | 4_3:-59773905 | None:intergenic |
| GCTCTTCAGTGTAAACTTCA+GGG | 0.440452 | 4_3:-59772319 | None:intergenic |
| TAATTCACATTTGTTGCAAT+CGG | 0.441018 | 4_3:-59773155 | None:intergenic |
| ATCGCATTACGAACAGATTC+GGG | 0.446329 | 4_3:+59771173 | Msa0652070:CDS |
| TTTGGATTCAATGCCAGCTT+AGG | 0.447077 | 4_3:+59774056 | Msa0652070:three_prime_UTR |
| AGTCCACTTGGGATTGATGC+TGG | 0.452136 | 4_3:-59773433 | None:intergenic |
| TTTAGTTAAATGGCCTAAGC+TGG | 0.462486 | 4_3:-59774069 | None:intergenic |
| GTTATCAAAACTCGGGGCAT+AGG | 0.463673 | 4_3:-59774112 | None:intergenic |
| AGAACGTCTTTCAGATTCGT+TGG | 0.472148 | 4_3:-59771316 | None:intergenic |
| AAAGTTCATCAAGTAAGAAA+AGG | 0.473277 | 4_3:+59772261 | Msa0652070:CDS |
| GGACACTGAGTAGGCCAATT+CGG | 0.474533 | 4_3:+59773891 | Msa0652070:CDS |
| CATGCTTTCCTCAGAGCGAC+GGG | 0.474902 | 4_3:-59773798 | None:intergenic |
| GAAGAATCAGCTTCTGAAGA+TGG | 0.476470 | 4_3:+59771093 | Msa0652070:CDS |
| TTACCCCAAGGACGGCTTTG+TGG | 0.478556 | 4_3:+59773175 | Msa0652070:CDS |
| GAGGAAAGCATGGAAGGATC+AGG | 0.480538 | 4_3:+59773809 | Msa0652070:CDS |
| CGTCTTTCAGATTCGTTGGA+TGG | 0.488192 | 4_3:-59771312 | None:intergenic |
| CCATGCTTTCCTCAGAGCGA+CGG | 0.490576 | 4_3:-59773799 | None:intergenic |
| ACAAGAAGGGCAAGTCCACT+TGG | 0.490962 | 4_3:-59773445 | None:intergenic |
| GTTTGTAAGGTGACGAAATT+GGG | 0.490978 | 4_3:+59773743 | Msa0652070:intron |
| GTTGAATCTGGAGAGATCTC+TGG | 0.493207 | 4_3:-59773860 | None:intergenic |
| TTATCAAAACTCGGGGCATA+GGG | 0.497961 | 4_3:-59774111 | None:intergenic |
| CTGAGAGAGTGTGAGAGAAT+GGG | 0.498766 | 4_3:+59771042 | None:intergenic |
| TTGCAAATTTCTCGACAAGA+AGG | 0.509937 | 4_3:-59773459 | None:intergenic |
| CGCTCTGAGGAAAGCATGGA+AGG | 0.514423 | 4_3:+59773803 | Msa0652070:CDS |
| AAGTAAGAAAAGGAAGGAAG+TGG | 0.520203 | 4_3:+59772271 | Msa0652070:CDS |
| CCATATATATGATCCAATCA+AGG | 0.520783 | 4_3:+59772412 | Msa0652070:CDS |
| TGCAAATTTCTCGACAAGAA+GGG | 0.527573 | 4_3:-59773458 | None:intergenic |
| GCTGAGAGAATGCATAAGCT+TGG | 0.545658 | 4_3:+59771216 | Msa0652070:CDS |
| CAAGAATGTTATCAAAACTC+GGG | 0.546403 | 4_3:-59774119 | None:intergenic |
| TAGATGGATATGATGAGGAT+GGG | 0.547781 | 4_3:+59772387 | Msa0652070:CDS |
| GTAGATGGATATGATGAGGA+TGG | 0.552923 | 4_3:+59772386 | Msa0652070:CDS |
| GTAGGCCAATTCGGACGAGA+AGG | 0.559902 | 4_3:+59773900 | Msa0652070:CDS |
| AGGAGATTGTGAGACTGATT+GGG | 0.560044 | 4_3:+59772355 | Msa0652070:CDS |
| GAGAGAAATGTCATCAATGC+GGG | 0.565621 | 4_3:+59772435 | Msa0652070:CDS |
| CACAATAGTTAACTGGTGGT+AGG | 0.567871 | 4_3:-59772211 | None:intergenic |
| CCGTCGCTCTGAGGAAAGCA+TGG | 0.568211 | 4_3:+59773799 | Msa0652070:CDS |
| CTCCAGATTCAACACTGACT+AGG | 0.570452 | 4_3:+59773870 | Msa0652070:CDS |
| ACAATAGTTAACTGGTGGTA+GGG | 0.571951 | 4_3:-59772210 | None:intergenic |
| GCCACCACGGCGAAAACTGA+CGG | 0.575386 | 4_3:+59771120 | Msa0652070:CDS |
| GAAGAGCATGAGAAGCTGCT+AGG | 0.582500 | 4_3:+59772335 | Msa0652070:CDS |
| TTCATCAAGTAAGAAAAGGA+AGG | 0.585443 | 4_3:+59772265 | Msa0652070:CDS |
| CTTGTACATCTACACGAAGA+TGG | 0.587597 | 4_3:+59773983 | Msa0652070:three_prime_UTR |
| AATAATGTTACCTTGTGTAG+AGG | 0.592456 | 4_3:-59773204 | None:intergenic |
| ACAAGAATGTTATCAAAACT+CGG | 0.594529 | 4_3:-59774120 | None:intergenic |
| TAGGCCAATTCGGACGAGAA+GGG | 0.596764 | 4_3:+59773901 | Msa0652070:CDS |
| ACGAACAGATTCGGGAACAA+AGG | 0.601062 | 4_3:+59771181 | Msa0652070:CDS |
| GTGGAGATTGCCTCTACACA+AGG | 0.601803 | 4_3:+59773194 | Msa0652070:CDS |
| GTGGAAATTCATATACCAGA+AGG | 0.609129 | 4_3:+59772290 | Msa0652070:CDS |
| TGAAGATGGCGGCGCCACCA+CGG | 0.609547 | 4_3:+59771107 | Msa0652070:CDS |
| CATATATATGATCCAATCAA+GGG | 0.618648 | 4_3:+59772413 | Msa0652070:CDS |
| CAAGAAGGGCAAGTCCACTT+GGG | 0.625978 | 4_3:-59773444 | None:intergenic |
| AGATTCGTTGGATGGTAACG+AGG | 0.637828 | 4_3:-59771304 | None:intergenic |
| GATTAAGACCCGTCGCTCTG+AGG | 0.643030 | 4_3:+59773790 | Msa0652070:CDS |
| GCGAAAACTGACGGTGACGA+AGG | 0.650745 | 4_3:+59771129 | Msa0652070:CDS |
| GCAACTGCAATAGCTGCCGT+AGG | 0.655636 | 4_3:+59773478 | Msa0652070:CDS |
| AGATGGATATGATGAGGATG+GGG | 0.664541 | 4_3:+59772388 | Msa0652070:CDS |
| AATGTGAATTACCCCAAGGA+CGG | 0.664710 | 4_3:+59773167 | Msa0652070:CDS |
| AAGCCAGCATCAATCCCAAG+TGG | 0.668388 | 4_3:+59773430 | Msa0652070:CDS |
| GAATCAGCTTCTGAAGATGG+CGG | 0.676548 | 4_3:+59771096 | Msa0652070:CDS |
| AACAAATGTGAATTACCCCA+AGG | 0.685873 | 4_3:+59773163 | Msa0652070:CDS |
| AAGAATGTTATCAAAACTCG+GGG | 0.686682 | 4_3:-59774118 | None:intergenic |
| TTGTCACAATAGTTAACTGG+TGG | 0.697560 | 4_3:-59772215 | None:intergenic |
| TCTCCACAAAGCCGTCCTTG+GGG | 0.703752 | 4_3:-59773178 | None:intergenic |
| GGAGAGAAATGTCATCAATG+CGG | 0.712891 | 4_3:+59772434 | Msa0652070:CDS |
| CACTGACTAGGACACTGAGT+AGG | 0.718098 | 4_3:+59773882 | Msa0652070:CDS |
| GTATGTAGATGGATATGATG+AGG | 0.739576 | 4_3:+59772382 | Msa0652070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAAATTTTATGTATTAATT+AGG | + | chr4_3:59771536-59771555 | Msa0652070:intron | 10.0% |
| !!! | TAATTTTTTTTATGTTTGAT+TGG | + | chr4_3:59772172-59772191 | Msa0652070:intron | 10.0% |
| !!! | GTTTATCTATTTATTGATTA+TGG | + | chr4_3:59771514-59771533 | Msa0652070:intron | 15.0% |
| !! | ATATTCTATTTAACTAAACA+TGG | + | chr4_3:59772663-59772682 | Msa0652070:intron | 15.0% |
| !! | TATTCTATTTAACTAAACAT+GGG | + | chr4_3:59772664-59772683 | Msa0652070:intron | 15.0% |
| !!! | ATGATGTTTTATATTGAATT+TGG | - | chr4_3:59772749-59772768 | None:intergenic | 15.0% |
| !! | AAATTCAATATAAAACATCA+TGG | + | chr4_3:59772748-59772767 | Msa0652070:intron | 15.0% |
| !!! | AAAATCATTTGTTTTCTTTT+AGG | + | chr4_3:59773110-59773129 | Msa0652070:intron | 15.0% |
| !!! | AAACTTCATTATGTAGTTTT+CGG | - | chr4_3:59771626-59771645 | None:intergenic | 20.0% |
| !! | TCAACTAATAAACATATGTT+TGG | - | chr4_3:59771705-59771724 | None:intergenic | 20.0% |
| !! | CTATCAATTGAAAATCATAT+CGG | - | chr4_3:59771780-59771799 | None:intergenic | 20.0% |
| !! | CCAATAATAGTTAGAAAAAA+TGG | - | chr4_3:59771924-59771943 | None:intergenic | 20.0% |
| !!! | CCATTTTTTCTAACTATTAT+TGG | + | chr4_3:59771921-59771940 | Msa0652070:intron | 20.0% |
| !! | TTCTATCATATCATATACTA+AGG | - | chr4_3:59772038-59772057 | None:intergenic | 20.0% |
| !! | TATGATATGATAGAACATTA+CGG | + | chr4_3:59772043-59772062 | Msa0652070:intron | 20.0% |
| !! | TGAGCTATGATATATATATA+TGG | + | chr4_3:59772126-59772145 | Msa0652070:intron | 20.0% |
| !! | CTATGATATATATATATGGT+TGG | + | chr4_3:59772130-59772149 | Msa0652070:intron | 20.0% |
| !!! | TAAGTTGTAATAACTTGTAA+TGG | + | chr4_3:59772793-59772812 | Msa0652070:intron | 20.0% |
| !!! | AAGTTGTAATAACTTGTAAT+GGG | + | chr4_3:59772794-59772813 | Msa0652070:intron | 20.0% |
| !! | TATACTTGTCATGTATTAAA+TGG | - | chr4_3:59773326-59773345 | None:intergenic | 20.0% |
| !! | TACTGGTAATATATACAATA+AGG | + | chr4_3:59773518-59773537 | Msa0652070:CDS | 20.0% |
| !!! | TTGGTTTTCTTATTTTTGTT+TGG | + | chr4_3:59774038-59774057 | Msa0652070:three_prime_UTR | 20.0% |
| !!! | GTTTTAGACTTTTAGTTAAA+TGG | - | chr4_3:59774082-59774101 | None:intergenic | 20.0% |
| !! | TTTGGAAAACCCAAAAATTT+TGG | + | chr4_3:59771596-59771615 | Msa0652070:intron | 25.0% |
| !! | TTCGGATAACCAAAATTTTT+GGG | - | chr4_3:59771608-59771627 | None:intergenic | 25.0% |
| !! | TTTCGGATAACCAAAATTTT+TGG | - | chr4_3:59771609-59771628 | None:intergenic | 25.0% |
| !! | CGATATGATTTTCAATTGAT+AGG | + | chr4_3:59771778-59771797 | Msa0652070:intron | 25.0% |
| ! | AAAGTTCATCAAGTAAGAAA+AGG | + | chr4_3:59772261-59772280 | Msa0652070:CDS | 25.0% |
| ! | CATATATATGATCCAATCAA+GGG | + | chr4_3:59772413-59772432 | Msa0652070:CDS | 25.0% |
| !! | TGTTTCAAAATAAAGTGTCA+TGG | - | chr4_3:59772557-59772576 | None:intergenic | 25.0% |
| !!! | TGACACTTTATTTTGAAACA+AGG | + | chr4_3:59772557-59772576 | Msa0652070:intron | 25.0% |
| !! | AGTTGTAATAACTTGTAATG+GGG | + | chr4_3:59772795-59772814 | Msa0652070:intron | 25.0% |
| !! | TAATTCACATTTGTTGCAAT+CGG | - | chr4_3:59773158-59773177 | None:intergenic | 25.0% |
| ! | TTTAGATTCAGATTGAGAAA+AGG | + | chr4_3:59773231-59773250 | Msa0652070:intron | 25.0% |
| !! | ATTTTCTACTTCTGTATTCT+AGG | + | chr4_3:59773388-59773407 | Msa0652070:intron | 25.0% |
| ! | CAAAGAAAAATGAAGGAAAA+AGG | - | chr4_3:59773656-59773675 | None:intergenic | 25.0% |
| !! | TTTTTCTTTGTCATGTGATT+TGG | + | chr4_3:59773666-59773685 | Msa0652070:intron | 25.0% |
| ! | ACAAGAATGTTATCAAAACT+CGG | - | chr4_3:59774123-59774142 | None:intergenic | 25.0% |
| TAGCACTATTTATTGCTTGT+TGG | + | chr4_3:59771402-59771421 | Msa0652070:intron | 30.0% | |
| TCACATACACTTCAGATTAA+AGG | - | chr4_3:59771472-59771491 | None:intergenic | 30.0% | |
| ACAAATCTGATGAAATTGTG+CGG | + | chr4_3:59771732-59771751 | Msa0652070:intron | 30.0% | |
| TGACATGTTTGTGTTATGTT+TGG | + | chr4_3:59771947-59771966 | Msa0652070:intron | 30.0% | |
| AAACATGTTACCATTAAGTG+TGG | - | chr4_3:59772092-59772111 | None:intergenic | 30.0% | |
| TTCATCAAGTAAGAAAAGGA+AGG | + | chr4_3:59772265-59772284 | Msa0652070:CDS | 30.0% | |
| CCTTGATTGGATCATATATA+TGG | - | chr4_3:59772415-59772434 | None:intergenic | 30.0% | |
| CCATATATATGATCCAATCA+AGG | + | chr4_3:59772412-59772431 | Msa0652070:CDS | 30.0% | |
| CTAAAAACCCTTCAATTCAT+AGG | - | chr4_3:59772522-59772541 | None:intergenic | 30.0% | |
| ! | TTACTAGTTTGCCAAAAGAA+AGG | + | chr4_3:59772629-59772648 | Msa0652070:intron | 30.0% |
| ! | GTTGTAATAACTTGTAATGG+GGG | + | chr4_3:59772796-59772815 | Msa0652070:intron | 30.0% |
| !!! | TGCCATAGCCAATTTTTTAA+TGG | + | chr4_3:59772854-59772873 | Msa0652070:intron | 30.0% |
| !!! | GCCATAGCCAATTTTTTAAT+GGG | + | chr4_3:59772855-59772874 | Msa0652070:intron | 30.0% |
| TCCCATTAAAAAATTGGCTA+TGG | - | chr4_3:59772859-59772878 | None:intergenic | 30.0% | |
| !!! | TTGGTTCTATGCTTTTTAAG+TGG | + | chr4_3:59772957-59772976 | Msa0652070:intron | 30.0% |
| ! | TACCTTAGTAGAACAGTTTT+AGG | + | chr4_3:59772983-59773002 | Msa0652070:intron | 30.0% |
| ATCTCGTTAATGCATAAAGT+TGG | + | chr4_3:59773033-59773052 | Msa0652070:intron | 30.0% | |
| TCAGAGAAACAAGTAACATA+TGG | - | chr4_3:59773072-59773091 | None:intergenic | 30.0% | |
| AATAATGTTACCTTGTGTAG+AGG | - | chr4_3:59773207-59773226 | None:intergenic | 30.0% | |
| ! | TATACAATAAGGTTAGTCAC+AGG | + | chr4_3:59773529-59773548 | Msa0652070:intron | 30.0% |
| GAAGATAGAACTGAATAGAA+GGG | - | chr4_3:59773576-59773595 | None:intergenic | 30.0% | |
| AGAAGATAGAACTGAATAGA+AGG | - | chr4_3:59773577-59773596 | None:intergenic | 30.0% | |
| TTTCGCTTCACATTCTTTAA+AGG | + | chr4_3:59773628-59773647 | Msa0652070:intron | 30.0% | |
| CACATGACAAAGAAAAATGA+AGG | - | chr4_3:59773663-59773682 | None:intergenic | 30.0% | |
| ! | AAGATGGTGATACTATGTTT+TGG | + | chr4_3:59773999-59774018 | Msa0652070:three_prime_UTR | 30.0% |
| AAGAATGTTATCAAAACTCG+GGG | - | chr4_3:59774121-59774140 | None:intergenic | 30.0% | |
| CAAGAATGTTATCAAAACTC+GGG | - | chr4_3:59774122-59774141 | None:intergenic | 30.0% | |
| !! | CTTGGTTTGTTAAAGCTTTC+TGG | + | chr4_3:59771234-59771253 | Msa0652070:CDS | 35.0% |
| ! | TAACGAGGAGTTTTTCTTGA+CGG | - | chr4_3:59771292-59771311 | None:intergenic | 35.0% |
| GTCTGATGAAATCATGTGTT+TGG | + | chr4_3:59771578-59771597 | Msa0652070:intron | 35.0% | |
| CAAATCTGATGAAATTGTGC+GGG | + | chr4_3:59771733-59771752 | Msa0652070:intron | 35.0% | |
| ATGTTACCATTAAGTGTGGT+CGG | - | chr4_3:59772088-59772107 | None:intergenic | 35.0% | |
| ACAATAGTTAACTGGTGGTA+GGG | - | chr4_3:59772213-59772232 | None:intergenic | 35.0% | |
| TTGTCACAATAGTTAACTGG+TGG | - | chr4_3:59772218-59772237 | None:intergenic | 35.0% | |
| AAGTAAGAAAAGGAAGGAAG+TGG | + | chr4_3:59772271-59772290 | Msa0652070:CDS | 35.0% | |
| GTGGAAATTCATATACCAGA+AGG | + | chr4_3:59772290-59772309 | Msa0652070:CDS | 35.0% | |
| GATTGGGAATTGTATGTAGA+TGG | + | chr4_3:59772371-59772390 | Msa0652070:CDS | 35.0% | |
| GTATGTAGATGGATATGATG+AGG | + | chr4_3:59772382-59772401 | Msa0652070:CDS | 35.0% | |
| TAGATGGATATGATGAGGAT+GGG | + | chr4_3:59772387-59772406 | Msa0652070:CDS | 35.0% | |
| GTTTGCCAAAAGAAAGGAAA+AGG | + | chr4_3:59772635-59772654 | Msa0652070:intron | 35.0% | |
| ! | GCTTTCCTTTTCCTTTCTTT+TGG | - | chr4_3:59772643-59772662 | None:intergenic | 35.0% |
| ATGGGTGATATAAGATGCAA+TGG | + | chr4_3:59772682-59772701 | Msa0652070:intron | 35.0% | |
| TGGGTGATATAAGATGCAAT+GGG | + | chr4_3:59772683-59772702 | Msa0652070:intron | 35.0% | |
| CATAGAACCAATGTTGTCTA+TGG | - | chr4_3:59772948-59772967 | None:intergenic | 35.0% | |
| TGCCTAAAACTGTTCTACTA+AGG | - | chr4_3:59772988-59773007 | None:intergenic | 35.0% | |
| AACAAATGTGAATTACCCCA+AGG | + | chr4_3:59773163-59773182 | Msa0652070:CDS | 35.0% | |
| TAAATGGAGTTAACTCATCG+AGG | - | chr4_3:59773310-59773329 | None:intergenic | 35.0% | |
| CTACTTCTGTATTCTAGGTA+TGG | + | chr4_3:59773393-59773412 | Msa0652070:intron | 35.0% | |
| TGCAAATTTCTCGACAAGAA+GGG | - | chr4_3:59773461-59773480 | None:intergenic | 35.0% | |
| TTGCAAATTTCTCGACAAGA+AGG | - | chr4_3:59773462-59773481 | None:intergenic | 35.0% | |
| AAAAATGGTTGGATGCATAC+TGG | + | chr4_3:59773501-59773520 | Msa0652070:CDS | 35.0% | |
| ! | CTTTGTCATGTGATTTGGAA+TGG | + | chr4_3:59773671-59773690 | Msa0652070:intron | 35.0% |
| CCTTACAAACACAGATGAAA+AGG | - | chr4_3:59773733-59773752 | None:intergenic | 35.0% | |
| ! | CCTTTTCATCTGTGTTTGTA+AGG | + | chr4_3:59773730-59773749 | Msa0652070:intron | 35.0% |
| TGTTTGTAAGGTGACGAAAT+TGG | + | chr4_3:59773742-59773761 | Msa0652070:intron | 35.0% | |
| GTTTGTAAGGTGACGAAATT+GGG | + | chr4_3:59773743-59773762 | Msa0652070:intron | 35.0% | |
| AGAGATCTCTGGTATTTCTT+TGG | - | chr4_3:59773852-59773871 | None:intergenic | 35.0% | |
| AGAACAGAAACATGCCTTAA+TGG | + | chr4_3:59773960-59773979 | Msa0652070:three_prime_UTR | 35.0% | |
| TGTAGATGTACAAGCCATTA+AGG | - | chr4_3:59773977-59773996 | None:intergenic | 35.0% | |
| TGGATATGAAGACAAGTTGT+TGG | + | chr4_3:59774019-59774038 | Msa0652070:three_prime_UTR | 35.0% | |
| TTTAGTTAAATGGCCTAAGC+TGG | - | chr4_3:59774072-59774091 | None:intergenic | 35.0% | |
| !! | AGCAGTTTTACAGAGCATTA+AGG | + | chr4_3:59774163-59774182 | Msa0652070:three_prime_UTR | 35.0% |
| !! | GCAGTTTTACAGAGCATTAA+GGG | + | chr4_3:59774164-59774183 | Msa0652070:three_prime_UTR | 35.0% |
| ! | GAAGAATCAGCTTCTGAAGA+TGG | + | chr4_3:59771093-59771112 | Msa0652070:CDS | 40.0% |
| CATCGCATTACGAACAGATT+CGG | + | chr4_3:59771172-59771191 | Msa0652070:CDS | 40.0% | |
| ATCGCATTACGAACAGATTC+GGG | + | chr4_3:59771173-59771192 | Msa0652070:CDS | 40.0% | |
| AGAACGTCTTTCAGATTCGT+TGG | - | chr4_3:59771319-59771338 | None:intergenic | 40.0% | |
| CTGAAAGACGTTCTTCTTCT+AGG | + | chr4_3:59771325-59771344 | Msa0652070:CDS | 40.0% | |
| !! | ATTGCTTGTTGGTGTTGTGT+TGG | + | chr4_3:59771413-59771432 | Msa0652070:intron | 40.0% |
| ! | GTGAAGTGTCAGTACTATCA+GGG | - | chr4_3:59771841-59771860 | None:intergenic | 40.0% |
| ! | TGTGAAGTGTCAGTACTATC+AGG | - | chr4_3:59771842-59771861 | None:intergenic | 40.0% |
| ATGATTGAATGTAGCCACGT+GGG | - | chr4_3:59771900-59771919 | None:intergenic | 40.0% | |
| AATGATTGAATGTAGCCACG+TGG | - | chr4_3:59771901-59771920 | None:intergenic | 40.0% | |
| CACAATAGTTAACTGGTGGT+AGG | - | chr4_3:59772214-59772233 | None:intergenic | 40.0% | |
| CGCTTGTCACAATAGTTAAC+TGG | - | chr4_3:59772221-59772240 | None:intergenic | 40.0% | |
| GCTCTTCAGTGTAAACTTCA+GGG | - | chr4_3:59772322-59772341 | None:intergenic | 40.0% | |
| TGCTCTTCAGTGTAAACTTC+AGG | - | chr4_3:59772323-59772342 | None:intergenic | 40.0% | |
| TAGGAGATTGTGAGACTGAT+TGG | + | chr4_3:59772354-59772373 | Msa0652070:CDS | 40.0% | |
| AGGAGATTGTGAGACTGATT+GGG | + | chr4_3:59772355-59772374 | Msa0652070:CDS | 40.0% | |
| GTAGATGGATATGATGAGGA+TGG | + | chr4_3:59772386-59772405 | Msa0652070:CDS | 40.0% | |
| AGATGGATATGATGAGGATG+GGG | + | chr4_3:59772388-59772407 | Msa0652070:CDS | 40.0% | |
| TGACATTTCTCTCCCTTGAT+TGG | - | chr4_3:59772428-59772447 | None:intergenic | 40.0% | |
| GGAGAGAAATGTCATCAATG+CGG | + | chr4_3:59772434-59772453 | Msa0652070:CDS | 40.0% | |
| GAGAGAAATGTCATCAATGC+GGG | + | chr4_3:59772435-59772454 | Msa0652070:CDS | 40.0% | |
| TGTCATCAATGCGGGTATTA+TGG | + | chr4_3:59772443-59772462 | Msa0652070:intron | 40.0% | |
| ACCCTTCAATTCATAGGAGA+GGG | - | chr4_3:59772516-59772535 | None:intergenic | 40.0% | |
| AACCCTTCAATTCATAGGAG+AGG | - | chr4_3:59772517-59772536 | None:intergenic | 40.0% | |
| GGGTGATATAAGATGCAATG+GGG | + | chr4_3:59772684-59772703 | Msa0652070:intron | 40.0% | |
| GGTGATATAAGATGCAATGG+GGG | + | chr4_3:59772685-59772704 | Msa0652070:intron | 40.0% | |
| !!! | ATGGCTTGGTGGATTTTAAG+AGG | + | chr4_3:59772717-59772736 | Msa0652070:intron | 40.0% |
| !!! | TGGTGGATTTTAAGAGGAGA+TGG | + | chr4_3:59772723-59772742 | Msa0652070:intron | 40.0% |
| CGGGCATCCCATTAAAAAAT+TGG | - | chr4_3:59772865-59772884 | None:intergenic | 40.0% | |
| AAACCATATAAGCACACCAG+TGG | - | chr4_3:59772905-59772924 | None:intergenic | 40.0% | |
| AGAACCAATGTTGTCTATGG+TGG | - | chr4_3:59772945-59772964 | None:intergenic | 40.0% | |
| ! | TCTTTTAGGCGCTTAACTGT+TGG | + | chr4_3:59773124-59773143 | Msa0652070:intron | 40.0% |
| AATGTGAATTACCCCAAGGA+CGG | + | chr4_3:59773167-59773186 | Msa0652070:CDS | 40.0% | |
| AATAGCTGCCGTAGGAAAAA+TGG | + | chr4_3:59773486-59773505 | Msa0652070:CDS | 40.0% | |
| !! | GCATCCAACCATTTTTCCTA+CGG | - | chr4_3:59773497-59773516 | None:intergenic | 40.0% |
| CAGTTCTATCTTCTTCAGTG+TGG | + | chr4_3:59773583-59773602 | Msa0652070:intron | 40.0% | |
| ! | GTCATGTGATTTGGAATGGA+AGG | + | chr4_3:59773675-59773694 | Msa0652070:intron | 40.0% |
| TGGAATGGAAGGCTAAGATA+TGG | + | chr4_3:59773686-59773705 | Msa0652070:intron | 40.0% | |
| !! | AGGGCTCTGAGAAGTTAAAT+AGG | + | chr4_3:59773920-59773939 | Msa0652070:exon | 40.0% |
| CTTGTACATCTACACGAAGA+TGG | + | chr4_3:59773983-59774002 | Msa0652070:three_prime_UTR | 40.0% | |
| TTTGGATTCAATGCCAGCTT+AGG | + | chr4_3:59774056-59774075 | Msa0652070:three_prime_UTR | 40.0% | |
| TTATCAAAACTCGGGGCATA+GGG | - | chr4_3:59774114-59774133 | None:intergenic | 40.0% | |
| ! | GAATCAGCTTCTGAAGATGG+CGG | + | chr4_3:59771096-59771115 | Msa0652070:CDS | 45.0% |
| ACGAACAGATTCGGGAACAA+AGG | + | chr4_3:59771181-59771200 | Msa0652070:CDS | 45.0% | |
| GCTGAGAGAATGCATAAGCT+TGG | + | chr4_3:59771216-59771235 | Msa0652070:CDS | 45.0% | |
| ! | AGGAGTTTTTCTTGACGGAG+GGG | - | chr4_3:59771287-59771306 | None:intergenic | 45.0% |
| ! | GAGGAGTTTTTCTTGACGGA+GGG | - | chr4_3:59771288-59771307 | None:intergenic | 45.0% |
| ! | AGATTCGTTGGATGGTAACG+AGG | - | chr4_3:59771307-59771326 | None:intergenic | 45.0% |
| CGTCTTTCAGATTCGTTGGA+TGG | - | chr4_3:59771315-59771334 | None:intergenic | 45.0% | |
| TCGGTCTCACTAAATGTACG+AGG | - | chr4_3:59771761-59771780 | None:intergenic | 45.0% | |
| ATGTAGCCGACCACACTTAA+TGG | + | chr4_3:59772079-59772098 | Msa0652070:intron | 45.0% | |
| CTTTCTTGACGCTCTGCTTT+AGG | - | chr4_3:59772245-59772264 | None:intergenic | 45.0% | |
| TGCCCTCTCCTATGAATTGA+AGG | + | chr4_3:59772511-59772530 | Msa0652070:intron | 45.0% | |
| GCCCTCTCCTATGAATTGAA+GGG | + | chr4_3:59772512-59772531 | Msa0652070:intron | 45.0% | |
| ! | CCAATGTTGTCTATGGTGGA+AGG | - | chr4_3:59772941-59772960 | None:intergenic | 45.0% |
| CCTTCCACCATAGACAACAT+TGG | + | chr4_3:59772938-59772957 | Msa0652070:intron | 45.0% | |
| GTTGAATCTGGAGAGATCTC+TGG | - | chr4_3:59773863-59773882 | None:intergenic | 45.0% | |
| ! | CTCCAGATTCAACACTGACT+AGG | + | chr4_3:59773870-59773889 | Msa0652070:CDS | 45.0% |
| ! | GTCCTAGTCAGTGTTGAATC+TGG | - | chr4_3:59773875-59773894 | None:intergenic | 45.0% |
| GTTATCAAAACTCGGGGCAT+AGG | - | chr4_3:59774115-59774134 | None:intergenic | 45.0% | |
| GAATGGGAACTCGTCGTAGA+AGG | + | chr4_3:59771058-59771077 | Msa0652070:exon | 50.0% | |
| !! | GACGAAGGTGTTGTCGTTTC+AGG | + | chr4_3:59771144-59771163 | Msa0652070:CDS | 50.0% |
| !!! | GCGGTGTTGGTGTTTTCTTG+AGG | - | chr4_3:59771263-59771282 | None:intergenic | 50.0% |
| ! | CGAGGAGTTTTTCTTGACGG+AGG | - | chr4_3:59771289-59771308 | None:intergenic | 50.0% |
| TTGAATGTAGCCACGTGGGT+TGG | - | chr4_3:59771896-59771915 | None:intergenic | 50.0% | |
| ACTTCAGGGTTTGTGCCTTC+TGG | - | chr4_3:59772308-59772327 | None:intergenic | 50.0% | |
| ! | GAAGAGCATGAGAAGCTGCT+AGG | + | chr4_3:59772335-59772354 | Msa0652070:CDS | 50.0% |
| ! | GTAATGGGGGCATGACAGAA+TGG | + | chr4_3:59772809-59772828 | Msa0652070:intron | 50.0% |
| CCATATAAGCACACCAGTGG+TGG | - | chr4_3:59772902-59772921 | None:intergenic | 50.0% | |
| CCACCACTGGTGTGCTTATA+TGG | + | chr4_3:59772899-59772918 | Msa0652070:intron | 50.0% | |
| ATCTCCACAAAGCCGTCCTT+GGG | - | chr4_3:59773182-59773201 | None:intergenic | 50.0% | |
| AATCTCCACAAAGCCGTCCT+TGG | - | chr4_3:59773183-59773202 | None:intergenic | 50.0% | |
| GTGGAGATTGCCTCTACACA+AGG | + | chr4_3:59773194-59773213 | Msa0652070:CDS | 50.0% | |
| AAGCCAGCATCAATCCCAAG+TGG | + | chr4_3:59773430-59773449 | Msa0652070:CDS | 50.0% | |
| AGTCCACTTGGGATTGATGC+TGG | - | chr4_3:59773436-59773455 | None:intergenic | 50.0% | |
| CAAGAAGGGCAAGTCCACTT+GGG | - | chr4_3:59773447-59773466 | None:intergenic | 50.0% | |
| ACAAGAAGGGCAAGTCCACT+TGG | - | chr4_3:59773448-59773467 | None:intergenic | 50.0% | |
| GCTGCCGTAGGAAAAATGGT+TGG | + | chr4_3:59773490-59773509 | Msa0652070:CDS | 50.0% | |
| ! | GAGGAAAGCATGGAAGGATC+AGG | + | chr4_3:59773809-59773828 | Msa0652070:CDS | 50.0% |
| ! | CACTGACTAGGACACTGAGT+AGG | + | chr4_3:59773882-59773901 | Msa0652070:CDS | 50.0% |
| GGACACTGAGTAGGCCAATT+CGG | + | chr4_3:59773891-59773910 | Msa0652070:CDS | 50.0% | |
| TAGGCCAATTCGGACGAGAA+GGG | + | chr4_3:59773901-59773920 | Msa0652070:CDS | 50.0% | |
| GCGAAAACTGACGGTGACGA+AGG | + | chr4_3:59771129-59771148 | Msa0652070:CDS | 55.0% | |
| ! | TTTTTCTTGACGGAGGGGCG+CGG | - | chr4_3:59771282-59771301 | None:intergenic | 55.0% |
| GACATTGACACCAACCCACG+TGG | + | chr4_3:59771883-59771902 | Msa0652070:intron | 55.0% | |
| ! | GCAATGGGGGCATGACAGAA+TGG | + | chr4_3:59772698-59772717 | Msa0652070:intron | 55.0% |
| ! | GGCATGACAGAATGGCTTGG+TGG | + | chr4_3:59772706-59772725 | Msa0652070:intron | 55.0% |
| ! | GGCATGACAGAATGGCTTGG+TGG | + | chr4_3:59772706-59772725 | Msa0652070:intron | 55.0% |
| TTACCCCAAGGACGGCTTTG+TGG | + | chr4_3:59773175-59773194 | Msa0652070:CDS | 55.0% | |
| TCTCCACAAAGCCGTCCTTG+GGG | - | chr4_3:59773181-59773200 | None:intergenic | 55.0% | |
| GCAACTGCAATAGCTGCCGT+AGG | + | chr4_3:59773478-59773497 | Msa0652070:CDS | 55.0% | |
| GATTAAGACCCGTCGCTCTG+AGG | + | chr4_3:59773790-59773809 | Msa0652070:CDS | 55.0% | |
| CATGCTTTCCTCAGAGCGAC+GGG | - | chr4_3:59773801-59773820 | None:intergenic | 55.0% | |
| CCATGCTTTCCTCAGAGCGA+CGG | - | chr4_3:59773802-59773821 | None:intergenic | 55.0% | |
| !! | CGCTCTGAGGAAAGCATGGA+AGG | + | chr4_3:59773803-59773822 | Msa0652070:CDS | 55.0% |
| GTAGGCCAATTCGGACGAGA+AGG | + | chr4_3:59773900-59773919 | Msa0652070:CDS | 55.0% | |
| AGAGCCCTTCTCGTCCGAAT+TGG | - | chr4_3:59773908-59773927 | None:intergenic | 55.0% | |
| GCCACCACGGCGAAAACTGA+CGG | + | chr4_3:59771120-59771139 | Msa0652070:CDS | 60.0% | |
| ! | ACCGTCAGTTTTCGCCGTGG+TGG | - | chr4_3:59771124-59771143 | None:intergenic | 60.0% |
| ! | GTCACCGTCAGTTTTCGCCG+TGG | - | chr4_3:59771127-59771146 | None:intergenic | 60.0% |
| ! | GGGGGCATGACAGAATGGCT+TGG | + | chr4_3:59772703-59772722 | Msa0652070:intron | 60.0% |
| ! | GGGGGCATGACAGAATGGCT+TGG | + | chr4_3:59772703-59772722 | Msa0652070:intron | 60.0% |
| TAATGGGATGCCCGCCGTCA+TGG | + | chr4_3:59772871-59772890 | Msa0652070:intron | 60.0% | |
| !! | CCGTCGCTCTGAGGAAAGCA+TGG | + | chr4_3:59773799-59773818 | Msa0652070:CDS | 60.0% |
| ! | TGAAGATGGCGGCGCCACCA+CGG | + | chr4_3:59771107-59771126 | Msa0652070:CDS | 65.0% |
| !! | CAGTGGTGGTGCCGCCATGA+CGG | - | chr4_3:59772888-59772907 | None:intergenic | 65.0% |
| ! | TTGACGGAGGGGCGCGGTGT+TGG | - | chr4_3:59771276-59771295 | None:intergenic | 70.0% |
| TGGGATGCCCGCCGTCATGG+CGG | + | chr4_3:59772874-59772893 | Msa0652070:intron | 70.0% | |
| !! | TGGTGGTGCCGCCATGACGG+CGG | - | chr4_3:59772885-59772904 | None:intergenic | 70.0% |
| CGTCATGGCGGCACCACCAC+TGG | + | chr4_3:59772886-59772905 | Msa0652070:intron | 70.0% | |
| !! | GGTGGTGCCGCCATGACGGC+GGG | - | chr4_3:59772884-59772903 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 59771056 | 59774222 | 59771056 | ID=Msa0652070;Name=Msa0652070 |
| chr4_3 | mRNA | 59771056 | 59774222 | 59771056 | ID=Msa0652070-mRNA-1;Parent=Msa0652070;Name=Msa0652070-mRNA-1;_AED=0.01;_eAED=0.01;_QI=4|1|1|1|1|1|5|285|313 |
| chr4_3 | exon | 59771056 | 59771346 | 59771056 | ID=Msa0652070-mRNA-1:exon:16022;Parent=Msa0652070-mRNA-1 |
| chr4_3 | exon | 59772202 | 59772456 | 59772202 | ID=Msa0652070-mRNA-1:exon:16023;Parent=Msa0652070-mRNA-1 |
| chr4_3 | exon | 59773132 | 59773215 | 59773132 | ID=Msa0652070-mRNA-1:exon:16024;Parent=Msa0652070-mRNA-1 |
| chr4_3 | exon | 59773410 | 59773539 | 59773410 | ID=Msa0652070-mRNA-1:exon:16025;Parent=Msa0652070-mRNA-1 |
| chr4_3 | exon | 59773752 | 59774222 | 59773752 | ID=Msa0652070-mRNA-1:exon:16026;Parent=Msa0652070-mRNA-1 |
| chr4_3 | five_prime_UTR | 59771056 | 59771059 | 59771056 | ID=Msa0652070-mRNA-1:five_prime_utr;Parent=Msa0652070-mRNA-1 |
| chr4_3 | CDS | 59771060 | 59771346 | 59771060 | ID=Msa0652070-mRNA-1:cds;Parent=Msa0652070-mRNA-1 |
| chr4_3 | CDS | 59772202 | 59772456 | 59772202 | ID=Msa0652070-mRNA-1:cds;Parent=Msa0652070-mRNA-1 |
| chr4_3 | CDS | 59773132 | 59773215 | 59773132 | ID=Msa0652070-mRNA-1:cds;Parent=Msa0652070-mRNA-1 |
| chr4_3 | CDS | 59773410 | 59773539 | 59773410 | ID=Msa0652070-mRNA-1:cds;Parent=Msa0652070-mRNA-1 |
| chr4_3 | CDS | 59773752 | 59773937 | 59773752 | ID=Msa0652070-mRNA-1:cds;Parent=Msa0652070-mRNA-1 |
| chr4_3 | three_prime_UTR | 59773938 | 59774222 | 59773938 | ID=Msa0652070-mRNA-1:three_prime_utr;Parent=Msa0652070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
