AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1446100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1446100 MtrunA17_Chr7g0275611 91.739 690 15 2 1 648 275 964 0.0 1305
Msa1446100 MtrunA17_Chr8g0347071 66.667 714 171 4 2 648 236 949 0.0 970
Msa1446100 MtrunA17_Chr3g0126701 57.715 674 222 8 34 648 394 1063 0.0 781
Msa1446100 MtrunA17_Chr1g0147121 53.942 723 256 8 1 648 314 1034 0.0 763
Msa1446100 MtrunA17_Chr7g0221611 43.949 157 80 4 495 648 894 1045 3.33e-31 130
Msa1446100 MtrunA17_Chr1g0149611 45.455 143 69 4 512 648 369 508 5.08e-31 127
Msa1446100 MtrunA17_Chr1g0149581 47.183 142 68 4 512 648 1527 1666 9.88e-31 129
Msa1446100 MtrunA17_Chr2g0297191 41.216 148 82 3 502 648 1028 1171 9.70e-30 125
Msa1446100 MtrunA17_Chr1g0201621 38.816 152 87 4 498 647 76 223 1.55e-20 95.1
Msa1446100 MtrunA17_Chr1g0194631 38.028 142 72 4 507 635 611 749 3.02e-20 95.5
Msa1446100 MtrunA17_Chr1g0201311 38.158 152 88 4 498 647 76 223 5.72e-20 93.6
Msa1446100 MtrunA17_Chr5g0401921 34.559 136 82 3 507 642 715 843 4.91e-19 91.7
Msa1446100 MtrunA17_Chr6g0477001 38.776 147 75 4 500 645 116 248 1.65e-18 87.4
Msa1446100 MtrunA17_Chr2g0305371 35.507 138 84 3 512 648 339 472 3.68e-18 88.2
Msa1446100 MtrunA17_Chr3g0125251 35.256 156 88 5 498 647 1316 1464 6.19e-16 82.4
Msa1446100 MtrunA17_Chr7g0270001 32.520 123 81 2 507 629 149 269 1.93e-15 77.4
Msa1446100 MtrunA17_Chr7g0235081 32.117 137 89 3 495 629 183 317 2.01e-15 78.2
Msa1446100 MtrunA17_Chr5g0403241 31.056 161 92 4 500 644 1346 1503 7.65e-13 72.4
Msa1446100 MtrunA17_Chr5g0399801 31.667 180 80 7 505 647 915 1088 2.05e-12 70.9
Msa1446100 MtrunA17_Chr4g0003501 30.065 153 71 3 505 627 783 929 1.71e-11 67.8
Msa1446100 MtrunA17_Chr7g0232981 31.902 163 80 6 512 643 349 511 2.89e-11 66.2
Msa1446100 MtrunA17_Chr4g0003511 30.323 155 70 4 505 627 878 1026 4.18e-11 66.6
Msa1446100 MtrunA17_Chr4g0019381 38.571 70 40 1 65 131 268 337 5.88e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1446100 AT3G61740.2 56.534 704 245 10 1 648 284 982 0.0 788
Msa1446100 AT3G61740.1 53.586 739 248 9 1 648 284 1018 0.0 775
Msa1446100 AT5G53430.1 55.075 670 240 6 38 648 376 1043 0.0 743
Msa1446100 AT4G27910.1 54.303 674 246 8 34 648 357 1027 0.0 719
Msa1446100 AT1G05830.2 38.542 192 105 5 465 648 873 1059 2.59e-32 134
Msa1446100 AT1G05830.2 28.859 149 95 4 220 358 586 733 6.02e-15 79.3
Msa1446100 AT1G05830.4 38.542 192 105 5 465 648 873 1059 2.59e-32 134
Msa1446100 AT1G05830.4 28.859 149 95 4 220 358 586 733 6.02e-15 79.3
Msa1446100 AT1G05830.1 38.542 192 105 5 465 648 873 1059 2.59e-32 134
Msa1446100 AT1G05830.1 28.859 149 95 4 220 358 586 733 6.02e-15 79.3
Msa1446100 AT1G05830.3 38.542 192 105 5 465 648 873 1059 2.59e-32 134
Msa1446100 AT1G05830.3 28.859 149 95 4 220 358 586 733 6.02e-15 79.3
Msa1446100 AT2G31650.1 40.909 176 93 5 476 648 871 1038 7.27e-32 132
Msa1446100 AT2G31650.1 30.201 149 93 4 220 358 569 716 2.02e-15 80.9
Msa1446100 AT5G42400.7 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.2 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.8 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.5 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.4 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.1 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.3 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT5G42400.6 38.323 167 90 4 483 648 1234 1388 6.45e-29 124
Msa1446100 AT1G76710.4 39.474 152 86 4 498 647 81 228 1.46e-19 92.8
Msa1446100 AT1G76710.2 39.474 152 86 4 498 647 81 228 1.55e-19 92.8
Msa1446100 AT1G76710.1 39.474 152 86 4 498 647 81 228 1.55e-19 92.8
Msa1446100 AT1G76710.3 39.474 152 86 4 498 647 81 228 1.74e-19 92.8
Msa1446100 AT2G23380.2 38.686 137 73 5 507 641 526 653 3.74e-18 89.0
Msa1446100 AT4G30860.1 35.256 156 86 4 494 648 324 465 3.78e-18 88.6
Msa1446100 AT2G23380.1 38.686 137 73 5 507 641 753 880 4.47e-18 89.4
Msa1446100 AT2G44150.1 39.231 130 74 3 517 645 127 252 4.84e-18 86.7
Msa1446100 AT1G02580.1 37.984 129 72 4 505 630 543 666 1.19e-17 87.4
Msa1446100 AT4G02020.1 36.585 123 74 3 507 628 708 827 1.41e-17 87.4
Msa1446100 AT3G59960.3 38.931 131 73 4 517 645 122 247 1.87e-17 84.0
Msa1446100 AT3G59960.2 38.931 131 73 4 517 645 122 247 1.87e-17 84.0
Msa1446100 AT3G59960.4 38.931 131 73 4 517 645 122 247 1.87e-17 84.0
Msa1446100 AT3G59960.1 38.931 131 73 4 517 645 122 247 2.99e-17 84.0
Msa1446100 AT5G28340.1 59.677 62 24 1 41 102 16 76 4.41e-17 84.7
Msa1446100 AT2G23740.1 34.940 166 90 4 500 648 1211 1375 3.03e-16 83.6
Msa1446100 AT2G23740.3 34.940 166 90 4 500 648 1218 1382 3.16e-16 83.6
Msa1446100 AT2G23740.6 34.940 166 90 4 500 648 1218 1382 3.16e-16 83.6
Msa1446100 AT2G23740.2 34.940 166 90 4 500 648 1218 1382 3.16e-16 83.6
Msa1446100 AT2G35160.5 37.398 123 65 3 512 628 617 733 9.15e-15 78.6
Msa1446100 AT2G35160.2 37.398 123 65 3 512 628 653 769 1.00e-14 78.6
Msa1446100 AT2G35160.3 37.398 123 65 3 512 628 653 769 1.00e-14 78.6
Msa1446100 AT2G35160.1 37.398 123 65 3 512 628 653 769 1.00e-14 78.6
Msa1446100 AT2G35160.4 37.398 123 65 3 512 628 653 769 1.00e-14 78.6
Msa1446100 AT1G77300.1 29.814 161 90 5 498 647 1018 1166 2.65e-14 77.4
Msa1446100 AT1G77300.2 29.814 161 90 5 498 647 1018 1166 2.84e-14 77.4
Msa1446100 AT3G61723.1 70.270 37 11 0 93 129 3 39 5.67e-12 62.0
Msa1446100 AT4G02020.4 34.831 89 57 1 507 595 708 795 1.05e-11 68.6
Msa1446100 AT5G13960.2 43.678 87 41 2 567 645 401 487 1.48e-11 67.8
Msa1446100 AT5G13960.1 42.697 89 43 2 567 647 535 623 2.08e-11 67.4

Find 235 sgRNAs with CRISPR-Local

Find 626 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGCAACCACTAATAAAA+TGG 0.142705 tig0031267:-17690 Msa1446100:CDS
GGATCTGAAATCAATGAATT+AGG 0.165117 tig0031267:-20732 Msa1446100:five_prime_UTR
TGGAATTAGATTTGTAAATA+AGG 0.165304 tig0031267:-20356 Msa1446100:five_prime_UTR
AATGAAAATAAGTACCTTAT+TGG 0.189840 tig0031267:+15200 None:intergenic
TTCATTTGGGTGATATAGTT+TGG 0.229686 tig0031267:-20135 Msa1446100:five_prime_UTR
ACCATTACTGAATCTGGATT+TGG 0.254575 tig0031267:+15402 None:intergenic
CTTATGAAAGTCACTTTCTT+TGG 0.255575 tig0031267:+19688 None:intergenic
CTGGAAGCATTCATTATTAC+TGG 0.269429 tig0031267:-11864 Msa1446100:three_prime_UTR
GTTCATAAATTTCCTACAAT+TGG 0.271969 tig0031267:+12108 None:intergenic
CCTATGGTTTACCTTCAAAA+AGG 0.279530 tig0031267:+16210 None:intergenic
AAGACTTACAAATGAAGTTT+TGG 0.279690 tig0031267:+18202 None:intergenic
TTATGAACTAGGTTAGTTAA+TGG 0.284198 tig0031267:-12093 Msa1446100:exon
AAAATTCAATATATGGAGTT+TGG 0.284282 tig0031267:+11826 None:intergenic
ATGAACCAGTTTATGCAAAA+TGG 0.284906 tig0031267:-17214 Msa1446100:CDS
GTTAAAGCGGAGAGTGAAAA+TGG 0.287170 tig0031267:-20208 Msa1446100:five_prime_UTR
TCCGACTTTCCCTTGCAATC+TGG 0.289613 tig0031267:+18451 None:intergenic
ATTCCCCTTCTTGGAATTCA+TGG 0.292080 tig0031267:-19834 Msa1446100:five_prime_UTR
GACTCGGGAGCTTGCAAAAT+AGG 0.294700 tig0031267:+20064 None:intergenic
GTAAAACGCGTTATTGAGTT+TGG 0.296638 tig0031267:+20597 None:intergenic
TTCATAAATTTCCTACAATT+GGG 0.299969 tig0031267:+12109 None:intergenic
GGGGATGGTATTCCCCTTCT+TGG 0.300688 tig0031267:-19843 Msa1446100:five_prime_UTR
AATCTCAAGGGACGCTTTAG+AGG 0.311492 tig0031267:-15333 Msa1446100:CDS
CTGTTTCTGACTTAACTTCA+TGG 0.319053 tig0031267:+17415 None:intergenic
GGAATTAGATTTGTAAATAA+GGG 0.323627 tig0031267:-20355 Msa1446100:five_prime_UTR
CAAAACCATGAAGAAGATTA+AGG 0.323746 tig0031267:-18995 Msa1446100:CDS
TGAATCCTTAATCTTCTTCA+TGG 0.325520 tig0031267:+18990 None:intergenic
TGCACAACCATTACTGAATC+TGG 0.325878 tig0031267:+15396 None:intergenic
CACCGATAATTCACTTGCTT+GGG 0.328806 tig0031267:-15005 Msa1446100:CDS
AATATTCTTGTTCAGATTCC+AGG 0.333356 tig0031267:-19732 Msa1446100:intron
GGACTATGCGTGGGCGAAGC+AGG 0.334035 tig0031267:-19864 Msa1446100:five_prime_UTR
TTTCAGGCAACACAGGTCTT+TGG 0.334623 tig0031267:+18266 None:intergenic
TAAAGGGAGTCGTATGTTAT+TGG 0.335990 tig0031267:-20230 Msa1446100:five_prime_UTR
GGAACGCCTTCACCATTTAC+AGG 0.344018 tig0031267:-14803 Msa1446100:intron
GTTCCATTGCCTCATGGTTT+CGG 0.344780 tig0031267:+16266 None:intergenic
TTCTTCACCAGCAGAAATAT+TGG 0.348515 tig0031267:+12348 None:intergenic
CAATACCTTGAAACGTTTGC+TGG 0.351475 tig0031267:+18608 None:intergenic
GATCTGAAATCAATGAATTA+GGG 0.351547 tig0031267:-20731 Msa1446100:five_prime_UTR
CCGACTTTCCCTTGCAATCT+GGG 0.351562 tig0031267:+18452 None:intergenic
ACCATTCTGATGCTGGTGAT+TGG 0.353884 tig0031267:-18784 Msa1446100:CDS
TACATGCTTACCTTGCAAAA+AGG 0.353988 tig0031267:+17385 None:intergenic
CTTCATGGAAATTCCAGCTT+GGG 0.354837 tig0031267:+17430 None:intergenic
AATGGTTGTGCATACCCCTC+TGG 0.357601 tig0031267:-15385 Msa1446100:CDS
CAAATCGGTGGAAGCTGAAT+TGG 0.357759 tig0031267:+20549 None:intergenic
TGCAACTTCCTGTGCTGAAC+AGG 0.359608 tig0031267:-19592 Msa1446100:CDS
TTTCTTTGGTCTTGTACAAT+CGG 0.367622 tig0031267:+19702 None:intergenic
CATGAAGTTAAGTCAGAAAC+AGG 0.370698 tig0031267:-17414 Msa1446100:CDS
GAAATTAACTGACCTGTAAA+TGG 0.372528 tig0031267:+14791 None:intergenic
CTGTGATGGTTGTAATGTTT+GGG 0.373170 tig0031267:-18655 Msa1446100:CDS
GCTGTGATGGTTGTAATGTT+TGG 0.373984 tig0031267:-18656 Msa1446100:CDS
GCACTTAAAGAATGAAGGTT+TGG 0.378085 tig0031267:+14979 None:intergenic
CCTCAATGGAGAGATATTTC+CGG 0.379399 tig0031267:+12023 None:intergenic
TCATTTGGGTGATATAGTTT+GGG 0.379404 tig0031267:-20134 Msa1446100:five_prime_UTR
CTGCACTAAGCAAACCTTAC+CGG 0.379550 tig0031267:-12042 Msa1446100:three_prime_UTR
GTTGGCAGATAATGGCATTC+TGG 0.384003 tig0031267:-19649 Msa1446100:CDS
ATGAAAATAAGTACCTTATT+GGG 0.385620 tig0031267:+15201 None:intergenic
CTTTGCAAGGATTATGTGCT+TGG 0.395078 tig0031267:-12407 Msa1446100:CDS
AATTTCCAGCAAACGTTTCA+AGG 0.395311 tig0031267:-18613 Msa1446100:intron
ACAAGATTATTATATGTAAC+AGG 0.395489 tig0031267:-17142 Msa1446100:intron
TTTGCAGATGGGTAGAAGAT+TGG 0.403813 tig0031267:-17172 Msa1446100:CDS
CCATTACTGAATCTGGATTT+GGG 0.409163 tig0031267:+15403 None:intergenic
CCATTCTGATGCTGGTGATT+GGG 0.411055 tig0031267:-18783 Msa1446100:intron
ATGTAACATGTGCTTGGTTC+CGG 0.413099 tig0031267:-16303 Msa1446100:CDS
TGGTTTCGGAAAACAACTTC+AGG 0.413514 tig0031267:+16280 None:intergenic
AATGCTTCCATCCAAGTTCA+AGG 0.415327 tig0031267:-20470 Msa1446100:five_prime_UTR
GAGGCAATGGAACCTGCCTC+TGG 0.415893 tig0031267:-16256 Msa1446100:CDS
TAAAACGCGTTATTGAGTTT+GGG 0.416320 tig0031267:+20598 None:intergenic
TTCAGCTACAATATTCAAAT+CGG 0.416513 tig0031267:+20534 None:intergenic
AACAATCTTTGCCTTCTAAC+CGG 0.416708 tig0031267:+14344 None:intergenic
TTCAACCTCTGAACATTATG+AGG 0.416920 tig0031267:-15268 Msa1446100:CDS
GAGGCAATGTTGGCAGATAA+TGG 0.417160 tig0031267:-19657 Msa1446100:exon
TTGTAGGAAATTTATGAACT+AGG 0.418090 tig0031267:-12104 Msa1446100:exon
ACCAGCAGAAATATTGGTCT+TGG 0.419654 tig0031267:+12354 None:intergenic
TTACAAAAGGCCTCCCAATA+AGG 0.422726 tig0031267:-15214 Msa1446100:intron
AAAGCAGGCATTGGCTGAAT+GGG 0.423928 tig0031267:-17770 Msa1446100:CDS
ATAATCCTTGCAAAGCAGTT+TGG 0.424513 tig0031267:+12415 None:intergenic
AGGAACTAGGAGCAATCTTA+AGG 0.428043 tig0031267:+16230 None:intergenic
GCACCGATAATTCACTTGCT+TGG 0.430380 tig0031267:-15006 Msa1446100:CDS
GGTAATTGATGCAACTGATA+AGG 0.433248 tig0031267:-12628 Msa1446100:CDS
TTGCAGATGGGTAGAAGATT+GGG 0.436806 tig0031267:-17171 Msa1446100:CDS
ATGGTTGTGCATACCCCTCT+GGG 0.436853 tig0031267:-15384 Msa1446100:CDS
GGCTTCTTCTGAATCTGTGA+TGG 0.439726 tig0031267:+20619 None:intergenic
AAAAGCAGGCATTGGCTGAA+TGG 0.444691 tig0031267:-17771 Msa1446100:CDS
TCTTTGCACCATAGCACTCT+TGG 0.448316 tig0031267:+16954 None:intergenic
CTTGGAAAATCAGCTATTCA+AGG 0.449530 tig0031267:-14577 Msa1446100:CDS
AAACCCAGGAAGTAAAATCT+TGG 0.450551 tig0031267:+16927 None:intergenic
GATTATGTGCTTGGGAGATC+AGG 0.453525 tig0031267:-12398 Msa1446100:CDS
AATGCAACCACTAATAAAAT+GGG 0.456087 tig0031267:-17689 Msa1446100:intron
GAAGCAAAGTACCGGTTAGA+AGG 0.458443 tig0031267:-14355 Msa1446100:CDS
GTTCAGAGGTTGAAGGTTCA+AGG 0.458605 tig0031267:+15277 None:intergenic
GTAATTGATGCAACTGATAA+GGG 0.460608 tig0031267:-12627 Msa1446100:CDS
CAGGATACAATATCTTGTTA+TGG 0.461186 tig0031267:-19039 Msa1446100:CDS
TTCTTTGGTCTTGTACAATC+GGG 0.464370 tig0031267:+19703 None:intergenic
TTCAAGGACTCTGTACTTCT+CGG 0.464616 tig0031267:-20454 Msa1446100:five_prime_UTR
CGACACTTGGCGGCAGATAG+TGG 0.465133 tig0031267:+15240 None:intergenic
CAACACTCTCTTTCTACATC+AGG 0.465853 tig0031267:+16887 None:intergenic
CCTTCTTGGAATTCATGGAT+AGG 0.467367 tig0031267:-19829 Msa1446100:intron
AGTATCGTGGTGAACAGTTA+AGG 0.469535 tig0031267:-14399 Msa1446100:CDS
GAATGCTTCCAGCTCATGGC+TGG 0.471980 tig0031267:+11875 None:intergenic
AAACATAGTGTGAAAGTAGA+AGG 0.474293 tig0031267:-17715 Msa1446100:CDS
AAGCTCCCGAGTCTGTTCTT+AGG 0.475308 tig0031267:-20054 Msa1446100:five_prime_UTR
TTGCTTTGTGATAGGATGCC+GGG 0.477967 tig0031267:-14843 Msa1446100:intron
GCCAAGACCAATATTTCTGC+TGG 0.481706 tig0031267:-12355 Msa1446100:CDS
AAATTAAAATCACCTGGCCT+TGG 0.481839 tig0031267:+19559 None:intergenic
CAAAGAAAGTGACTTTCATA+AGG 0.485645 tig0031267:-19687 Msa1446100:five_prime_UTR
TAATATATTGTGCAGTTCAC+AGG 0.486204 tig0031267:-15515 Msa1446100:intron
TTATTGCACTTAAAGAATGA+AGG 0.488618 tig0031267:+14974 None:intergenic
AACATAACACAAATTGCATC+GGG 0.489497 tig0031267:+20022 None:intergenic
AGAGATGTGCGGTTTGCAGA+TGG 0.489992 tig0031267:-17184 Msa1446100:CDS
CCAAGTGTCGTGTTTACAAA+AGG 0.490232 tig0031267:-15227 Msa1446100:CDS
CTCGTAGAGATTTGCAAGAA+GGG 0.490722 tig0031267:-14540 Msa1446100:CDS
TTTGCAAGGATTATGTGCTT+GGG 0.492081 tig0031267:-12406 Msa1446100:CDS
TGTACAATCGGGTATGCCCC+TGG 0.493229 tig0031267:+19714 None:intergenic
TTTGCTTTGTGATAGGATGC+CGG 0.495752 tig0031267:-14844 Msa1446100:intron
GACTATGCGTGGGCGAAGCA+GGG 0.495864 tig0031267:-19863 Msa1446100:five_prime_UTR
ATGGAGAGATATTTCCGGTA+AGG 0.499626 tig0031267:+12028 None:intergenic
CAATATATGGAGTTTGGAAG+TGG 0.501627 tig0031267:+11832 None:intergenic
GCTCGTAGAGATTTGCAAGA+AGG 0.505407 tig0031267:-14541 Msa1446100:CDS
AGGCAGGTTCCATTGCCTCA+TGG 0.506155 tig0031267:+16260 None:intergenic
TTACCCCACTTAGTGAGATA+AGG 0.508596 tig0031267:-11961 Msa1446100:three_prime_UTR
CCTATCCATGAATTCCAAGA+AGG 0.508824 tig0031267:+19829 None:intergenic
ACTTCATGGAAATTCCAGCT+TGG 0.515022 tig0031267:+17429 None:intergenic
AGCTACAATATTCAAATCGG+TGG 0.516229 tig0031267:+20537 None:intergenic
CCACTTAGTGAGATAAGGCT+TGG 0.517355 tig0031267:-11956 Msa1446100:three_prime_UTR
GAAGGTGAGAATAGTGACAT+TGG 0.517945 tig0031267:-20376 Msa1446100:five_prime_UTR
GCTGAATGGGAACGGCATAC+AGG 0.518383 tig0031267:-17757 Msa1446100:CDS
TCATAAATTTCCTACAATTG+GGG 0.519144 tig0031267:+12110 None:intergenic
GTTCAAGATTAGTGAGGAAG+TGG 0.523406 tig0031267:-12649 Msa1446100:CDS
GAAAATTGTAGAGTCTGCCT+TGG 0.524458 tig0031267:-14595 Msa1446100:CDS
AAACATAACACAAATTGCAT+CGG 0.525202 tig0031267:+20021 None:intergenic
AACTCAATTGAACAACAATA+CGG 0.527937 tig0031267:-14953 Msa1446100:intron
TAATGAATGCTTCCAGCTCA+TGG 0.528335 tig0031267:+11871 None:intergenic
TAGATTTGTAAATAAGGGAA+AGG 0.528339 tig0031267:-20350 Msa1446100:five_prime_UTR
ATCTTAAGGATTCCAGAGGC+AGG 0.529969 tig0031267:+16244 None:intergenic
AAGTACAGAGTCCTTGAACT+TGG 0.530305 tig0031267:+20459 None:intergenic
GGAATATCACTGCCAAGGCC+AGG 0.530950 tig0031267:-19571 Msa1446100:intron
GTTGCGTTCTACAGTGAAGA+AGG 0.532356 tig0031267:-15559 Msa1446100:CDS
ACAGAGTCCTTGAACTTGGA+TGG 0.532483 tig0031267:+20463 None:intergenic
ATTTGGCACCATTCTGATGC+TGG 0.532842 tig0031267:-18791 Msa1446100:CDS
AGGCAATGAGGAGGCAATGT+TGG 0.533877 tig0031267:-19667 Msa1446100:exon
AACTGATGTTGAGTTGCTGT+GGG 0.534511 tig0031267:-16329 Msa1446100:CDS
ATATTCTTGTTCAGATTCCA+GGG 0.535307 tig0031267:-19731 Msa1446100:intron
ACTCTTGGTGAACAGCAACT+TGG 0.536090 tig0031267:+16969 None:intergenic
GTGATATTCCTGTTCAGCAC+AGG 0.536188 tig0031267:+19584 None:intergenic
ACAATATCTTGTTATGGCTG+CGG 0.538001 tig0031267:-19033 Msa1446100:CDS
ACGGAACACAATCCCCAAGC+TGG 0.538151 tig0031267:-17443 Msa1446100:CDS
TGATTTGTATGTTTGTGATG+TGG 0.538202 tig0031267:+18417 None:intergenic
TTTGTAAACACGACACTTGG+CGG 0.538471 tig0031267:+15230 None:intergenic
TTACTATTGCCCAGATTGCA+AGG 0.539807 tig0031267:-18461 Msa1446100:CDS
CCCAATCACCAGCATCAGAA+TGG 0.540703 tig0031267:+18783 None:intergenic
CCTCTGGATGATCGCGACAA+TGG 0.541959 tig0031267:+20502 None:intergenic
ATAGGATCAATGACGACAGC+AGG 0.545693 tig0031267:+20082 None:intergenic
GGCGTAGTGTTGCTGATCTG+AGG 0.547095 tig0031267:-14378 Msa1446100:CDS
AACTTCACTTCAAAATCTCA+AGG 0.550311 tig0031267:-15346 Msa1446100:CDS
CCAAGCCTTATCTCACTAAG+TGG 0.552672 tig0031267:+11956 None:intergenic
CTATCCATGAATTCCAAGAA+GGG 0.555475 tig0031267:+19830 None:intergenic
CCGGAAATATCTCTCCATTG+AGG 0.556313 tig0031267:-12023 Msa1446100:three_prime_UTR
AAATCAGCTATTCAAGGGTG+GGG 0.556616 tig0031267:-14571 Msa1446100:CDS
CATAAATTTCCTACAATTGG+GGG 0.557442 tig0031267:+12111 None:intergenic
TGAAAGTAAAGTAAAACAGA+AGG 0.560473 tig0031267:+20829 None:intergenic
TTGTGCAAGTGTAGCACGTG+TGG 0.560753 tig0031267:-17799 Msa1446100:CDS
GCTTGGGAGATCAGGAGAGC+AGG 0.561803 tig0031267:-12390 Msa1446100:CDS
ATGACGACAGCAGGCCATGC+CGG 0.561841 tig0031267:+20091 None:intergenic
CACAGCAACTCAACATCAGT+TGG 0.562296 tig0031267:+16331 None:intergenic
GAGATGTGCGGTTTGCAGAT+GGG 0.562589 tig0031267:-17183 Msa1446100:CDS
TTTCCGAAACCATGAGGCAA+TGG 0.563563 tig0031267:-16269 Msa1446100:CDS
AAAATCAGCTATTCAAGGGT+GGG 0.563568 tig0031267:-14572 Msa1446100:CDS
TTCATGGAAATTCCAGCTTG+GGG 0.563704 tig0031267:+17431 None:intergenic
GGGTTCATGTAACATGTGCT+TGG 0.565060 tig0031267:-16309 Msa1446100:CDS
GCGTAGTGTTGCTGATCTGA+GGG 0.565380 tig0031267:-14377 Msa1446100:CDS
ACCGATAATTCACTTGCTTG+GGG 0.568704 tig0031267:-15004 Msa1446100:CDS
CAAGCCTTATCTCACTAAGT+GGG 0.569016 tig0031267:+11957 None:intergenic
ATCTGAGGGAAGCAAAGTAC+CGG 0.572325 tig0031267:-14363 Msa1446100:CDS
GCATGCCAAACTGCTTTGCA+AGG 0.572847 tig0031267:-12420 Msa1446100:CDS
CTGACTTAGGTATGCTGTGA+TGG 0.573283 tig0031267:-18669 Msa1446100:intron
AACTGACCTGTAAATGGTGA+AGG 0.574216 tig0031267:+14797 None:intergenic
AGGCATTGGCTGAATGGGAA+CGG 0.575274 tig0031267:-17765 Msa1446100:CDS
CCCAAATCCAGATTCAGTAA+TGG 0.577133 tig0031267:-15403 Msa1446100:CDS
CCCAGATTGCAAGGGAAAGT+CGG 0.583861 tig0031267:-18452 Msa1446100:CDS
TTCGGAAAACAACTTCAGGC+CGG 0.585949 tig0031267:+16284 None:intergenic
TCATAATGTTCAGAGGTTGA+AGG 0.587056 tig0031267:+15270 None:intergenic
CAACTGATGTTGAGTTGCTG+TGG 0.587107 tig0031267:-16330 Msa1446100:CDS
TTATAGAGCTGAGCAAATTG+TGG 0.590020 tig0031267:-19619 Msa1446100:CDS
TTGCGTTCTACAGTGAAGAA+GGG 0.590318 tig0031267:-15558 Msa1446100:CDS
TCGTATGTTATTGGTTAAAG+CGG 0.592806 tig0031267:-20221 Msa1446100:five_prime_UTR
GTGGTGTGCAATGGCTTGAA+AGG 0.593816 tig0031267:-18235 Msa1446100:CDS
ATTTGCTCAGCTCTATAATG+TGG 0.594776 tig0031267:+19624 None:intergenic
CGGTGGAAGCTGAATTGGAG+TGG 0.597678 tig0031267:+20554 None:intergenic
TGGAGTGGATCTCGCCATCA+CGG 0.597706 tig0031267:+20569 None:intergenic
TACTATTGCCCAGATTGCAA+GGG 0.599167 tig0031267:-18460 Msa1446100:CDS
GATATAGTTTGGGCAAAATG+TGG 0.600657 tig0031267:-20124 Msa1446100:five_prime_UTR
TGCGTGGGCGAAGCAGGGGA+TGG 0.600857 tig0031267:-19858 Msa1446100:five_prime_UTR
CCGATAATTCACTTGCTTGG+GGG 0.606891 tig0031267:-15003 Msa1446100:CDS
CAAATCAAAAGATCTAAGCT+CGG 0.607829 tig0031267:-20403 Msa1446100:five_prime_UTR
TTATTGTAAATCTTGTGCAA+AGG 0.607958 tig0031267:-18950 Msa1446100:intron
TTCACACACTCTACAAACCC+AGG 0.608046 tig0031267:+16913 None:intergenic
TGTGCAAGTGTAGCACGTGT+GGG 0.611342 tig0031267:-17798 Msa1446100:CDS
GAAAATCAGCTATTCAAGGG+TGG 0.611381 tig0031267:-14573 Msa1446100:CDS
CTGGATGATCGCGACAATGG+AGG 0.613844 tig0031267:+20505 None:intergenic
ACAGCGCCTAAGAACAGACT+CGG 0.613960 tig0031267:+20048 None:intergenic
TATCCATGAATTCCAAGAAG+GGG 0.615664 tig0031267:+19831 None:intergenic
AGATTTGCAAGAAGGGGACA+TGG 0.615755 tig0031267:-14533 Msa1446100:intron
TTGGAAAATCAGCTATTCAA+GGG 0.617569 tig0031267:-14576 Msa1446100:CDS
ACTTCACTTCAAAATCTCAA+GGG 0.617691 tig0031267:-15345 Msa1446100:CDS
TCGTAGAGATTTGCAAGAAG+GGG 0.617837 tig0031267:-14539 Msa1446100:CDS
GAACAGGAATATCACTGCCA+AGG 0.624061 tig0031267:-19576 Msa1446100:CDS
AAAATAAGTACCTTATTGGG+AGG 0.624661 tig0031267:+15204 None:intergenic
TGCGTTCTACAGTGAAGAAG+GGG 0.630161 tig0031267:-15557 Msa1446100:CDS
CTCAACCTCATAATGTTCAG+AGG 0.631848 tig0031267:+15263 None:intergenic
TAGAGCTGAGCAAATTGTGG+AGG 0.632383 tig0031267:-19616 Msa1446100:CDS
GGTTGTGCATACCCCTCTGG+GGG 0.635590 tig0031267:-15382 Msa1446100:CDS
GCACCTGGCAGGACTATGCG+TGG 0.636994 tig0031267:-19874 Msa1446100:intron
AATCTAGCGGTGGTGTGCAA+TGG 0.638103 tig0031267:-18244 Msa1446100:CDS
TGGTTGTGCATACCCCTCTG+GGG 0.639129 tig0031267:-15383 Msa1446100:CDS
AAGTAAAGTAAAACAGAAGG+AGG 0.641089 tig0031267:+20832 None:intergenic
GCTGTTCACCAAGAGTGCTA+TGG 0.641660 tig0031267:-16962 Msa1446100:CDS
CAGCGCCTAAGAACAGACTC+GGG 0.643241 tig0031267:+20049 None:intergenic
AGATGAGCGAGATGAACTCA+AGG 0.647248 tig0031267:-12152 Msa1446100:CDS
TGCTTTGTGATAGGATGCCG+GGG 0.652047 tig0031267:-14842 Msa1446100:intron
GTGACTTTCATAAGGCAATG+AGG 0.654998 tig0031267:-19679 Msa1446100:five_prime_UTR
GCAGCTGTTCAAGATTAGTG+AGG 0.658448 tig0031267:-12655 Msa1446100:intron
AGAGCTGAGCAAATTGTGGA+GGG 0.658542 tig0031267:-19615 Msa1446100:CDS
CTGCAGGTTGTTGAGTATCG+TGG 0.658893 tig0031267:-14412 Msa1446100:intron
TATTCTTGTTCAGATTCCAG+GGG 0.660445 tig0031267:-19730 Msa1446100:intron
CACCTGGCAGGACTATGCGT+GGG 0.661987 tig0031267:-19873 Msa1446100:intron
GAGTTTGGAAGTGGAGTCTG+TGG 0.671441 tig0031267:+11841 None:intergenic
AAGCCTTATCTCACTAAGTG+GGG 0.674702 tig0031267:+11958 None:intergenic
CAAGATTTACAATAATGCTG+AGG 0.678605 tig0031267:+18958 None:intergenic
GTTGCCTGAAAATCTAGCGG+TGG 0.688256 tig0031267:-18254 Msa1446100:CDS
AGCAATCTTAAGGATTCCAG+AGG 0.695160 tig0031267:+16240 None:intergenic
CTTAAATCGAAACAATACTG+TGG 0.695578 tig0031267:-18827 Msa1446100:CDS
CCATTGTCGCGATCATCCAG+AGG 0.697602 tig0031267:-20502 Msa1446100:five_prime_UTR
TGTGTTGCCTGAAAATCTAG+CGG 0.699729 tig0031267:-18257 Msa1446100:CDS
ACTTTCATAAGGCAATGAGG+AGG 0.712675 tig0031267:-19676 Msa1446100:five_prime_UTR
CTTAAATGAAGAAAACACCC+CGG 0.721817 tig0031267:+14825 None:intergenic
ATGGACAACAGAGAGATGTG+CGG 0.745685 tig0031267:-17195 Msa1446100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACACTTATTTTATATTATA+GGG - tig0031267:14519-14538 Msa1446100:intron 10.0%
!! TGTAAAAATATAAGATAAAT+GGG + tig0031267:14667-14686 None:intergenic 10.0%
!! ATGTAAAAATATAAGATAAA+TGG + tig0031267:14668-14687 None:intergenic 10.0%
!!! TTTTAAATACATTTTTGAAA+TGG - tig0031267:15420-15439 Msa1446100:intron 10.0%
!!! CTAATTTGTTTTTATAATAT+GGG - tig0031267:16314-16333 Msa1446100:CDS 10.0%
!!! TAATTTGTTTTTATAATATG+GGG - tig0031267:16315-16334 Msa1446100:CDS 10.0%
!! ATGAAATTAAAATGTAAAAA+CGG + tig0031267:17266-17285 None:intergenic 10.0%
!!! TTACATTTTAATTTCATTTT+AGG - tig0031267:17269-17288 Msa1446100:intron 10.0%
!! TTGAAACTTATTATAAAATT+AGG + tig0031267:19802-19821 None:intergenic 10.0%
!! AAATTCAAAATCTAATGAAT+TGG - tig0031267:12794-12813 Msa1446100:intron 15.0%
!! AAATGTTGCAAATTAAATTT+CGG + tig0031267:13829-13848 None:intergenic 15.0%
!!! AATTTAATTTGCAACATTTA+TGG - tig0031267:13830-13849 Msa1446100:intron 15.0%
!!! CAACACTTATTTTATATTAT+AGG - tig0031267:14518-14537 Msa1446100:intron 15.0%
!!! GAAATCAAAGTATTTTAATT+AGG + tig0031267:14553-14572 None:intergenic 15.0%
!! TATCTTATATACTTCAAATT+TGG + tig0031267:15136-15155 None:intergenic 15.0%
!! TTATAAAAACAAATTAGCAA+TGG + tig0031267:16311-16330 None:intergenic 15.0%
!!! GCTAATTTGTTTTTATAATA+TGG - tig0031267:16313-16332 Msa1446100:CDS 15.0%
!!! AATTTGTTTTTATAATATGG+GGG - tig0031267:16316-16335 Msa1446100:CDS 15.0%
!! GTTATCTAATTTCTTTAATT+TGG - tig0031267:17626-17645 Msa1446100:intron 15.0%
!! GAAACAAAATATAAATAAAG+AGG + tig0031267:18047-18066 None:intergenic 15.0%
!!! GTTTAACATTTATTGTTTTT+GGG - tig0031267:18067-18086 Msa1446100:intron 15.0%
!!! AGTGATTTTCAAAAATTTAA+TGG - tig0031267:18533-18552 Msa1446100:intron 15.0%
!!! TATTTAGAACACATTAAAAA+TGG + tig0031267:18681-18700 None:intergenic 15.0%
!!! TACAAAGAGTTTTATAAATT+TGG + tig0031267:19701-19720 None:intergenic 15.0%
!! ATTTCAATTAACAGAAAAAA+CGG + tig0031267:19730-19749 None:intergenic 15.0%
!! CTTATTATAAAATTAGGATT+TGG + tig0031267:19796-19815 None:intergenic 15.0%
!! TGGAATTAGATTTGTAAATA+AGG - tig0031267:12341-12360 Msa1446100:intron 20.0%
!! GGAATTAGATTTGTAAATAA+GGG - tig0031267:12342-12361 Msa1446100:intron 20.0%
!! TTGAAAAAAGAGATTGATAA+TGG - tig0031267:12384-12403 Msa1446100:CDS 20.0%
!!! TTTTTCGGTTATTCAAAAAA+TGG - tig0031267:12696-12715 Msa1446100:intron 20.0%
!! TTAAAAAAATCCTCATGATA+TGG + tig0031267:13439-13458 None:intergenic 20.0%
!! AAATAAGCATAAATTAAACC+AGG + tig0031267:13968-13987 None:intergenic 20.0%
!!! ATCAAAATTTTGAGATCTTA+TGG - tig0031267:13996-14015 Msa1446100:intron 20.0%
!!! TCAAAATTTTGAGATCTTAT+GGG - tig0031267:13997-14016 Msa1446100:intron 20.0%
!!! AGTCATCTTACATAAAATTT+TGG + tig0031267:14180-14199 None:intergenic 20.0%
!! AAAATATAAGATAAATGGGT+GGG + tig0031267:14663-14682 None:intergenic 20.0%
!! AAAAATATAAGATAAATGGG+TGG + tig0031267:14664-14683 None:intergenic 20.0%
!! TATATGAAATTCTTCTTGAA+TGG + tig0031267:14848-14867 None:intergenic 20.0%
!! ACAAGATTATTATATGTAAC+AGG - tig0031267:15555-15574 Msa1446100:CDS 20.0%
!! TATAATAACTTTACAACTTG+GGG + tig0031267:15609-15628 None:intergenic 20.0%
!! CTATAATAACTTTACAACTT+GGG + tig0031267:15610-15629 None:intergenic 20.0%
!! TCTATAATAACTTTACAACT+TGG + tig0031267:15611-15630 None:intergenic 20.0%
!! TTTCTGATTTACAAAACTTT+AGG - tig0031267:15646-15665 Msa1446100:intron 20.0%
!! TTCTGATTTACAAAACTTTA+GGG - tig0031267:15647-15666 Msa1446100:intron 20.0%
!! TCTACATTTAATACTTTCTT+TGG - tig0031267:15858-15877 Msa1446100:intron 20.0%
!! AATTGATTATATGCATAGAT+TGG + tig0031267:16022-16041 None:intergenic 20.0%
!! TAAAAATTAAAAGGGGAAAA+AGG + tig0031267:16266-16285 None:intergenic 20.0%
!! ATAACTAAATGAATTCTGTT+GGG - tig0031267:16610-16629 Msa1446100:intron 20.0%
!!! TGTTTTGTATAAGTCATATT+GGG + tig0031267:16715-16734 None:intergenic 20.0%
!! ATGAAAATAAGTACCTTATT+GGG + tig0031267:17499-17518 None:intergenic 20.0%
!! AATGAAAATAAGTACCTTAT+TGG + tig0031267:17500-17519 None:intergenic 20.0%
!!! CGTTTAACATTTATTGTTTT+TGG - tig0031267:18066-18085 Msa1446100:intron 20.0%
!!! TCTGTTTCTTTTTTAAAAGA+AGG + tig0031267:19458-19477 None:intergenic 20.0%
!! TTCATAAATTTCCTACAATT+GGG + tig0031267:20591-20610 None:intergenic 20.0%
!!! ATTGCTTGATTTTATTATAG+AGG - tig0031267:20790-20809 Msa1446100:five_prime_UTR 20.0%
! TGAAAGTAAAGTAAAACAGA+AGG + tig0031267:11871-11890 None:intergenic 25.0%
!! GATCTGAAATCAATGAATTA+GGG - tig0031267:11966-11985 Msa1446100:three_prime_UTR 25.0%
! ATCACAAAAAAGATGAAATC+TGG - tig0031267:12012-12031 Msa1446100:three_prime_UTR 25.0%
! TTCAGCTACAATATTCAAAT+CGG + tig0031267:12166-12185 None:intergenic 25.0%
! TAGATTTGTAAATAAGGGAA+AGG - tig0031267:12347-12366 Msa1446100:CDS 25.0%
!!! GTTTAAGAGCATTAAAAAGA+CGG - tig0031267:12443-12462 Msa1446100:intron 25.0%
!!! TGAAAATGGTTTTGATGAAA+AGG - tig0031267:12503-12522 Msa1446100:intron 25.0%
!!! GAAAATGGTTTTGATGAAAA+GGG - tig0031267:12504-12523 Msa1446100:intron 25.0%
!! TTTTGATGAAAAGGGTAAAA+AGG - tig0031267:12512-12531 Msa1446100:intron 25.0%
! TTTGATGAAAAGGGTAAAAA+GGG - tig0031267:12513-12532 Msa1446100:intron 25.0%
!!! AAACTAGTGGATTTTCATTT+GGG - tig0031267:12549-12568 Msa1446100:intron 25.0%
! AAACATAACACAAATTGCAT+CGG + tig0031267:12679-12698 None:intergenic 25.0%
!! GCAATTTGTGTTATGTTTTT+CGG - tig0031267:12681-12700 Msa1446100:intron 25.0%
! ATTCAAAAAATGGAAAGCAA+AGG - tig0031267:12706-12725 Msa1446100:intron 25.0%
! TTCAAAAAATGGAAAGCAAA+GGG - tig0031267:12707-12726 Msa1446100:intron 25.0%
! TAACTCAAACCTTTAGATAA+AGG + tig0031267:12752-12771 None:intergenic 25.0%
!! GTATGATTTTTGTGTGTTTT+TGG - tig0031267:13490-13509 Msa1446100:intron 25.0%
! ACCAAAAATGATCAAAAAGT+TGG + tig0031267:13516-13535 None:intergenic 25.0%
! TTATTGTAAATCTTGTGCAA+AGG - tig0031267:13747-13766 Msa1446100:intron 25.0%
!!! CAAAATTTTGAGATCTTATG+GGG - tig0031267:13998-14017 Msa1446100:intron 25.0%
!! TTACATAAAATTTTGGACCA+GGG + tig0031267:14173-14192 None:intergenic 25.0%
!! AAGACTTACAAATGAAGTTT+TGG + tig0031267:14498-14517 None:intergenic 25.0%
! GACAAATTTCTTAACAAATG+TGG - tig0031267:14587-14606 Msa1446100:CDS 25.0%
! TGTAAGAAAGAGATAGAAAA+GGG + tig0031267:14757-14776 None:intergenic 25.0%
! TGGAAAAAGATTTAGTTGAT+GGG + tig0031267:14790-14809 None:intergenic 25.0%
! TTGGAAAAAGATTTAGTTGA+TGG + tig0031267:14791-14810 None:intergenic 25.0%
!!! TGTGGTTTCTTTTATTGATT+TGG + tig0031267:14810-14829 None:intergenic 25.0%
! AATGCAACCACTAATAAAAT+GGG - tig0031267:15008-15027 Msa1446100:CDS 25.0%
! TATCTTGCTAGATTAATATG+TGG - tig0031267:15040-15059 Msa1446100:intron 25.0%
! AAACAAATTTCTTCAGATCA+CGG - tig0031267:15235-15254 Msa1446100:CDS 25.0%
! TTCATTTCTTGAATGTGATA+AGG - tig0031267:15364-15383 Msa1446100:CDS 25.0%
! TCTGATTTACAAAACTTTAG+GGG - tig0031267:15648-15667 Msa1446100:intron 25.0%
! TTCTCACTATAGAATTATTG+CGG + tig0031267:15947-15966 None:intergenic 25.0%
!! TTTTCCATTCATATCATGAT+TGG - tig0031267:15975-15994 Msa1446100:intron 25.0%
! GATAACTAAATGAATTCTGT+TGG - tig0031267:16609-16628 Msa1446100:intron 25.0%
! TAACTAAATGAATTCTGTTG+GGG - tig0031267:16611-16630 Msa1446100:intron 25.0%
!! GTGTTTTGTATAAGTCATAT+TGG + tig0031267:16716-16735 None:intergenic 25.0%
! CTGGTTTAAACATAAGTAAA+AGG + tig0031267:16948-16967 None:intergenic 25.0%
!! TTATTTTCCATGTGTTCTTT+TGG - tig0031267:17236-17255 Msa1446100:intron 25.0%
! TTATTGCACTTAAAGAATGA+AGG + tig0031267:17726-17745 None:intergenic 25.0%
! AACTCAATTGAACAACAATA+CGG - tig0031267:17744-17763 Msa1446100:CDS 25.0%
!! TTCTAATTTTGCTTTGTGAT+AGG - tig0031267:17846-17865 Msa1446100:intron 25.0%
! ATATAAATAAAGAGGAGATG+TGG + tig0031267:18039-18058 None:intergenic 25.0%
!!! TGTTTTTGGGTTTTAGAAAA+CGG - tig0031267:18080-18099 Msa1446100:intron 25.0%
! ATGTACATTTAGTATATCAG+GGG + tig0031267:18250-18269 None:intergenic 25.0%
! CATGTACATTTAGTATATCA+GGG + tig0031267:18251-18270 None:intergenic 25.0%
! TTTGTTTGGATAGTAGTAAA+TGG - tig0031267:18459-18478 Msa1446100:CDS 25.0%
!! TAGTGAAAACTAGATTTTCT+AGG - tig0031267:18738-18757 Msa1446100:intron 25.0%
!! AAAACTAGATTTTCTAGGTA+GGG - tig0031267:18743-18762 Msa1446100:intron 25.0%
!! TGACAAATGATTTTTGTCAT+AGG + tig0031267:18840-18859 None:intergenic 25.0%
! TGACAAAAATCATTTGTCAT+TGG - tig0031267:18841-18860 Msa1446100:intron 25.0%
! GACAAAAATCATTTGTCATT+GGG - tig0031267:18842-18861 Msa1446100:intron 25.0%
!! ATATTTTCCAAAGTCATTTG+CGG + tig0031267:19127-19146 None:intergenic 25.0%
!!! TTGATGGTTCATTATTTTGA+AGG - tig0031267:19351-19370 Msa1446100:intron 25.0%
! AGGTTGTTAATTGCATAAAT+GGG - tig0031267:19514-19533 Msa1446100:intron 25.0%
!!! GAGTTTTATAAATTTGGTCA+CGG + tig0031267:19695-19714 None:intergenic 25.0%
!!! CTTTAAGATTACAAACACAA+TGG - tig0031267:19866-19885 Msa1446100:five_prime_UTR 25.0%
! AACAATAACACTTCAAAAAC+AGG + tig0031267:19965-19984 None:intergenic 25.0%
!! TTATTGTTTGCTGCTAATAT+AGG - tig0031267:19977-19996 Msa1446100:intron 25.0%
! ATTTCCAATTAATCTTGTCT+TGG - tig0031267:20128-20147 Msa1446100:five_prime_UTR 25.0%
! TAAACCAAGACAAGATTAAT+TGG + tig0031267:20135-20154 None:intergenic 25.0%
! TCATAAATTTCCTACAATTG+GGG + tig0031267:20590-20609 None:intergenic 25.0%
! GTTCATAAATTTCCTACAAT+TGG + tig0031267:20592-20611 None:intergenic 25.0%
! TTGTAGGAAATTTATGAACT+AGG - tig0031267:20593-20612 Msa1446100:five_prime_UTR 25.0%
!! TTATGAACTAGGTTAGTTAA+TGG - tig0031267:20604-20623 Msa1446100:five_prime_UTR 25.0%
!!! TTAATGGTTTTGCATTGTTT+CGG - tig0031267:20620-20639 Msa1446100:five_prime_UTR 25.0%
!! AAAAAAAAGTACAACCTCAA+TGG + tig0031267:20691-20710 None:intergenic 25.0%
AAGTAAAGTAAAACAGAAGG+AGG + tig0031267:11868-11887 None:intergenic 30.0%
! CTCTTTCATTCTTCGATTTT+TGG - tig0031267:11941-11960 Msa1446100:three_prime_UTR 30.0%
!! TTTCATTCTTCGATTTTTGG+TGG - tig0031267:11944-11963 Msa1446100:three_prime_UTR 30.0%
! GGATCTGAAATCAATGAATT+AGG - tig0031267:11965-11984 Msa1446100:three_prime_UTR 30.0%
TAAAACGCGTTATTGAGTTT+GGG + tig0031267:12102-12121 None:intergenic 30.0%
CAAATCAAAAGATCTAAGCT+CGG - tig0031267:12294-12313 Msa1446100:intron 30.0%
AGCATTAAAAAGACGGTTAA+AGG - tig0031267:12450-12469 Msa1446100:intron 30.0%
GCATTAAAAAGACGGTTAAA+GGG - tig0031267:12451-12470 Msa1446100:intron 30.0%
! TCGTATGTTATTGGTTAAAG+CGG - tig0031267:12476-12495 Msa1446100:intron 30.0%
TTGATGAAAAGGGTAAAAAG+GGG - tig0031267:12514-12533 Msa1446100:intron 30.0%
! GAAAGAGATTTTCAAACTAG+TGG - tig0031267:12536-12555 Msa1446100:intron 30.0%
!!! CAAACTAGTGGATTTTCATT+TGG - tig0031267:12548-12567 Msa1446100:intron 30.0%
TTCATTTGGGTGATATAGTT+TGG - tig0031267:12562-12581 Msa1446100:intron 30.0%
TCATTTGGGTGATATAGTTT+GGG - tig0031267:12563-12582 Msa1446100:intron 30.0%
AACATAACACAAATTGCATC+GGG + tig0031267:12678-12697 None:intergenic 30.0%
CTCTATACACCTTTATCTAA+AGG - tig0031267:12740-12759 Msa1446100:intron 30.0%
AATATTCTTGTTCAGATTCC+AGG - tig0031267:12965-12984 Msa1446100:intron 30.0%
ATATTCTTGTTCAGATTCCA+GGG - tig0031267:12966-12985 Msa1446100:intron 30.0%
!! TTTCTTTGGTCTTGTACAAT+CGG + tig0031267:12998-13017 None:intergenic 30.0%
! CTTATGAAAGTCACTTTCTT+TGG + tig0031267:13012-13031 None:intergenic 30.0%
CAAAGAAAGTGACTTTCATA+AGG - tig0031267:13010-13029 Msa1446100:intron 30.0%
GTGGAAAAATTAAAATCACC+TGG + tig0031267:13147-13166 None:intergenic 30.0%
ACTTGTAATTTAGATGACCT+AGG - tig0031267:13260-13279 Msa1446100:intron 30.0%
TTCTTAGTAGGAAGGTTTAA+GGG - tig0031267:13305-13324 Msa1446100:intron 30.0%
! GCCAACTTTTTGATCATTTT+TGG - tig0031267:13512-13531 Msa1446100:intron 30.0%
ATCGTGTGAATAAATTATGC+AGG - tig0031267:13639-13658 Msa1446100:intron 30.0%
CAGGATACAATATCTTGTTA+TGG - tig0031267:13658-13677 Msa1446100:intron 30.0%
CAAAACCATGAAGAAGATTA+AGG - tig0031267:13702-13721 Msa1446100:intron 30.0%
TGAATCCTTAATCTTCTTCA+TGG + tig0031267:13710-13729 None:intergenic 30.0%
CAAGATTTACAATAATGCTG+AGG + tig0031267:13742-13761 None:intergenic 30.0%
GCAATAGATAAATCAAGTCA+AGG + tig0031267:13807-13826 None:intergenic 30.0%
CTTAAATCGAAACAATACTG+TGG - tig0031267:13870-13889 Msa1446100:intron 30.0%
! CTTACATAAAATTTTGGACC+AGG + tig0031267:14174-14193 None:intergenic 30.0%
! TTTTATGTAAGATGACTGAC+TGG - tig0031267:14183-14202 Msa1446100:intron 30.0%
! TGATTTGTATGTTTGTGATG+TGG + tig0031267:14283-14302 None:intergenic 30.0%
!!! TGATCTCATGTCTTTTTTTC+CGG - tig0031267:14389-14408 Msa1446100:CDS 30.0%
ATTTCTTAACAAATGTGGCT+TGG - tig0031267:14592-14611 Msa1446100:CDS 30.0%
!!! ATCTCCCCTCTTATTTTTTT+AGG - tig0031267:14710-14729 Msa1446100:intron 30.0%
GTGACCTAAAAAAATAAGAG+GGG + tig0031267:14717-14736 None:intergenic 30.0%
GGTGACCTAAAAAAATAAGA+GGG + tig0031267:14718-14737 None:intergenic 30.0%
AGGTGACCTAAAAAAATAAG+AGG + tig0031267:14719-14738 None:intergenic 30.0%
GTGTAAGAAAGAGATAGAAA+AGG + tig0031267:14758-14777 None:intergenic 30.0%
TGGCATAATAGTTAATTGTG+TGG + tig0031267:14828-14847 None:intergenic 30.0%
!!! CACACTATGTTTCCATTTTT+TGG + tig0031267:14974-14993 None:intergenic 30.0%
AAACATAGTGTGAAAGTAGA+AGG - tig0031267:14982-15001 Msa1446100:CDS 30.0%
CAATGCAACCACTAATAAAA+TGG - tig0031267:15007-15026 Msa1446100:CDS 30.0%
! ACACATACCCATTTTATTAG+TGG + tig0031267:15018-15037 None:intergenic 30.0%
CTTCAAATTTGGAGAAGTTT+GGG + tig0031267:15125-15144 None:intergenic 30.0%
ACTTCAAATTTGGAGAAGTT+TGG + tig0031267:15126-15145 None:intergenic 30.0%
!! AAAGAAGTGCAGAAGTATTA+TGG + tig0031267:15197-15216 None:intergenic 30.0%
ATTTCTTGAATGTGATAAGG+AGG - tig0031267:15367-15386 Msa1446100:CDS 30.0%
!! AACTGGTTCATATTTTTCTG+AGG + tig0031267:15474-15493 None:intergenic 30.0%
ATGAACCAGTTTATGCAAAA+TGG - tig0031267:15483-15502 Msa1446100:intron 30.0%
GGATCAAATGTGAATTACTT+CGG - tig0031267:15669-15688 Msa1446100:intron 30.0%
AACTCTTCAGTAGTAACTTA+TGG - tig0031267:15916-15935 Msa1446100:intron 30.0%
TCTCACTATAGAATTATTGC+GGG + tig0031267:15946-15965 None:intergenic 30.0%
! CCTCATGCAAATATGTTTTT+GGG - tig0031267:16080-16099 Msa1446100:intron 30.0%
ATGTGTTCATAAGTTGTCTT+TGG - tig0031267:16196-16215 Msa1446100:intron 30.0%
AAAAGGCCATTTAAATGGTA+AGG + tig0031267:16249-16268 None:intergenic 30.0%
TTTACCTTCAAAAAGGAACT+AGG + tig0031267:16483-16502 None:intergenic 30.0%
!! CTTTTTGAAGGTAAACCATA+GGG - tig0031267:16488-16507 Msa1446100:intron 30.0%
AACTAAATGAATTCTGTTGG+GGG - tig0031267:16612-16631 Msa1446100:intron 30.0%
ACACTTTCTACTCAAGTTAT+TGG - tig0031267:16732-16751 Msa1446100:intron 30.0%
CACTTTCTACTCAAGTTATT+GGG - tig0031267:16733-16752 Msa1446100:intron 30.0%
ACTTTCTACTCAAGTTATTG+GGG - tig0031267:16734-16753 Msa1446100:intron 30.0%
!! TTCTGAATTTGCTCTTTTTC+TGG - tig0031267:16995-17014 Msa1446100:intron 30.0%
GAAGTAAGCATTTAGTTACA+TGG - tig0031267:17066-17085 Msa1446100:intron 30.0%
TAATATATTGTGCAGTTCAC+AGG - tig0031267:17182-17201 Msa1446100:CDS 30.0%
!!! AGATTTTGAAGTGAAGTTCT+TGG + tig0031267:17349-17368 None:intergenic 30.0%
AACTTCACTTCAAAATCTCA+AGG - tig0031267:17351-17370 Msa1446100:intron 30.0%
ACTTCACTTCAAAATCTCAA+GGG - tig0031267:17352-17371 Msa1446100:intron 30.0%
AAAATAAGTACCTTATTGGG+AGG + tig0031267:17496-17515 None:intergenic 30.0%
CTTAAGTTATCAACTTCTCT+AGG - tig0031267:17535-17554 Msa1446100:intron 30.0%
! TTTTCTTCTATATTGCCAGA+AGG - tig0031267:17663-17682 Msa1446100:intron 30.0%
!! CGGTAATCTTCTTTTTGTTT+TGG - tig0031267:17764-17783 Msa1446100:CDS 30.0%
GAAATTAACTGACCTGTAAA+TGG + tig0031267:17909-17928 None:intergenic 30.0%
TTGGAAAATCAGCTATTCAA+GGG - tig0031267:18121-18140 Msa1446100:intron 30.0%
!! CATTTCGTATTGACTTAAGA+TGG - tig0031267:18190-18209 Msa1446100:intron 30.0%
GCATGTACATTTAGTATATC+AGG + tig0031267:18252-18271 None:intergenic 30.0%
CAAATATCATGAGACTTGAT+AGG - tig0031267:18576-18595 Msa1446100:intron 30.0%
!!! TTTTTTGTTTCAACTCCAGA+CGG - tig0031267:18614-18633 Msa1446100:CDS 30.0%
! ACGGGTCTTCAATTTTATAA+GGG - tig0031267:18633-18652 Msa1446100:CDS 30.0%
!!! TCTAGTTTTCACTATCTTGA+GGG + tig0031267:18732-18751 None:intergenic 30.0%
!!! ATCTAGTTTTCACTATCTTG+AGG + tig0031267:18733-18752 None:intergenic 30.0%
! GAAAACTAGATTTTCTAGGT+AGG - tig0031267:18742-18761 Msa1446100:intron 30.0%
! ATTTTCTAGGTAGGGAAATT+GGG - tig0031267:18751-18770 Msa1446100:intron 30.0%
TGATTAGAACCTTCTTAGTA+GGG - tig0031267:18779-18798 Msa1446100:intron 30.0%
AATCATTTGTCATTGGGAAA+AGG - tig0031267:18848-18867 Msa1446100:intron 30.0%
ATTGCATAAAAAGGTAGTCT+TGG + tig0031267:18981-19000 None:intergenic 30.0%
TCACATGACATTGCATAAAA+AGG + tig0031267:18990-19009 None:intergenic 30.0%
AGGTTAATATGATAGGAACA+TGG + tig0031267:19047-19066 None:intergenic 30.0%
AGAGTTGAGGTTAATATGAT+AGG + tig0031267:19054-19073 None:intergenic 30.0%
ATCATATTAACCTCAACTCT+TGG - tig0031267:19054-19073 Msa1446100:intron 30.0%
! GCAAATGACTTTGGAAAATA+TGG - tig0031267:19126-19145 Msa1446100:intron 30.0%
CATTTATCTTTGTTGATCCA+TGG + tig0031267:19290-19309 None:intergenic 30.0%
ACAAAGATAAATGTTGACAC+AGG - tig0031267:19297-19316 Msa1446100:intron 30.0%
CTCTATTCTTTCAAACTTTG+TGG + tig0031267:19394-19413 None:intergenic 30.0%
GAGGTTGTTAATTGCATAAA+TGG - tig0031267:19513-19532 Msa1446100:intron 30.0%
! ATCAATAGCTGCAAATTTTG+AGG + tig0031267:19541-19560 None:intergenic 30.0%
!! AGACTCTAGGATTTAGAAAA+TGG - tig0031267:19658-19677 Msa1446100:exon 30.0%
!! GACTCTAGGATTTAGAAAAT+GGG - tig0031267:19659-19678 Msa1446100:exon 30.0%
TAAGATTACAAACACAATGG+TGG - tig0031267:19869-19888 Msa1446100:intron 30.0%
! AATGCTTATCAGGTTTCTTT+TGG - tig0031267:19913-19932 Msa1446100:intron 30.0%
CTTGGTTATGTGGTTTATAA+TGG - tig0031267:19939-19958 Msa1446100:intron 30.0%
GTAATTGATGCAACTGATAA+GGG - tig0031267:20070-20089 Msa1446100:five_prime_UTR 30.0%
GAGACAAAAAACTTCATTAC+TGG + tig0031267:20471-20490 None:intergenic 30.0%
AAGTAATCATACCTGTAGAT+GGG + tig0031267:20516-20535 None:intergenic 30.0%
CATAAATTTCCTACAATTGG+GGG + tig0031267:20589-20608 None:intergenic 30.0%
GTAAAACGCGTTATTGAGTT+TGG + tig0031267:12103-12122 None:intergenic 35.0%
AGCTACAATATTCAAATCGG+TGG + tig0031267:12163-12182 None:intergenic 35.0%
TAAAGGGAGTCGTATGTTAT+TGG - tig0031267:12467-12486 Msa1446100:intron 35.0%
GATATAGTTTGGGCAAAATG+TGG - tig0031267:12573-12592 Msa1446100:intron 35.0%
! AAAATGTGGCAAGACTTTTC+CGG - tig0031267:12587-12606 Msa1446100:intron 35.0%
TATCCATGAATTCCAAGAAG+GGG + tig0031267:12869-12888 None:intergenic 35.0%
CTATCCATGAATTCCAAGAA+GGG + tig0031267:12870-12889 None:intergenic 35.0%
AACAACCAAAATCACACACA+CGG + tig0031267:12901-12920 None:intergenic 35.0%
TTTCTGCCTGCAAGAATATT+TGG - tig0031267:12921-12940 Msa1446100:intron 35.0%
TATTCTTGTTCAGATTCCAG+GGG - tig0031267:12967-12986 Msa1446100:intron 35.0%
!! TTCTTTGGTCTTGTACAATC+GGG + tig0031267:12997-13016 None:intergenic 35.0%
ATTTGCTCAGCTCTATAATG+TGG + tig0031267:13076-13095 None:intergenic 35.0%
TTATAGAGCTGAGCAAATTG+TGG - tig0031267:13078-13097 Msa1446100:intron 35.0%
AAATTAAAATCACCTGGCCT+TGG + tig0031267:13141-13160 None:intergenic 35.0%
TAGTTGCCATTCTTCTTAGT+AGG - tig0031267:13293-13312 Msa1446100:intron 35.0%
AACCTTCCTACTAAGAAGAA+TGG + tig0031267:13302-13321 None:intergenic 35.0%
CTTCTTAGTAGGAAGGTTTA+AGG - tig0031267:13304-13323 Msa1446100:intron 35.0%
ATATACTGCAGCATCTGATT+TGG - tig0031267:13332-13351 Msa1446100:intron 35.0%
TTTGGTTATAGCATGCTTCT+TGG - tig0031267:13350-13369 Msa1446100:intron 35.0%
TAATCACTTATGACCACTGA+AGG - tig0031267:13386-13405 Msa1446100:intron 35.0%
! ACAATATCTTGTTATGGCTG+CGG - tig0031267:13664-13683 Msa1446100:intron 35.0%
!! ATCTTCTTCATGGTTTTGCA+TGG + tig0031267:13700-13719 None:intergenic 35.0%
GTGGCATTTGCAAAAAGATT+TGG - tig0031267:13889-13908 Msa1446100:intron 35.0%
CTGTGATGGTTGTAATGTTT+GGG - tig0031267:14042-14061 Msa1446100:intron 35.0%
AATTTCCAGCAAACGTTTCA+AGG - tig0031267:14084-14103 Msa1446100:intron 35.0%
TTCTGTTTCCCATACTTGTA+GGG - tig0031267:14332-14351 Msa1446100:intron 35.0%
! TTGTTTTCTACTGATCTGTC+CGG + tig0031267:14411-14430 None:intergenic 35.0%
TAAGAAATTTGTCTGCAGCA+TGG + tig0031267:14580-14599 None:intergenic 35.0%
ATGGGTGGGCAATATTATAT+AGG + tig0031267:14649-14668 None:intergenic 35.0%
!! TTTAGTTGATGGGTTGTGAA+TGG + tig0031267:14780-14799 None:intergenic 35.0%
!! CTGTTTCTGACTTAACTTCA+TGG + tig0031267:15285-15304 None:intergenic 35.0%
CATGAAGTTAAGTCAGAAAC+AGG - tig0031267:15283-15302 Msa1446100:CDS 35.0%
TACATGCTTACCTTGCAAAA+AGG + tig0031267:15315-15334 None:intergenic 35.0%
AATGTGATAAGGAGGTCTTA+TGG - tig0031267:15375-15394 Msa1446100:CDS 35.0%
! GTTGTCCATTTTGCATAAAC+TGG + tig0031267:15491-15510 None:intergenic 35.0%
! ATCTCCAAGATTTTACTTCC+TGG - tig0031267:15766-15785 Msa1446100:intron 35.0%
! TCTCCAAGATTTTACTTCCT+GGG - tig0031267:15767-15786 Msa1446100:intron 35.0%
AAACCCAGGAAGTAAAATCT+TGG + tig0031267:15773-15792 None:intergenic 35.0%
TCACTATAGAATTATTGCGG+GGG + tig0031267:15944-15963 None:intergenic 35.0%
CTCACTATAGAATTATTGCG+GGG + tig0031267:15945-15964 None:intergenic 35.0%
CAAGCCAATCATGATATGAA+TGG + tig0031267:15982-16001 None:intergenic 35.0%
TTAGCTCACTTTCGTAGTTA+TGG - tig0031267:16041-16060 Msa1446100:intron 35.0%
! GCCTCATGCAAATATGTTTT+TGG - tig0031267:16079-16098 Msa1446100:intron 35.0%
CCCAAAAACATATTTGCATG+AGG + tig0031267:16083-16102 None:intergenic 35.0%
TTGTCGCCTTACCATTTAAA+TGG - tig0031267:16240-16259 Msa1446100:CDS 35.0%
CGCGGCATAAAAATTAAAAG+GGG + tig0031267:16273-16292 None:intergenic 35.0%
CCGCGGCATAAAAATTAAAA+GGG + tig0031267:16274-16293 None:intergenic 35.0%
!!! CCCTTTTAATTTTTATGCCG+CGG - tig0031267:16271-16290 Msa1446100:CDS 35.0%
ACCGCGGCATAAAAATTAAA+AGG + tig0031267:16275-16294 None:intergenic 35.0%
TGGATAAACAAATACAACCG+CGG + tig0031267:16291-16310 None:intergenic 35.0%
CCTATGGTTTACCTTCAAAA+AGG + tig0031267:16490-16509 None:intergenic 35.0%
!! CCTTTTTGAAGGTAAACCAT+AGG - tig0031267:16487-16506 Msa1446100:intron 35.0%
AAGGTAAACCATAGGGTTTA+AGG - tig0031267:16495-16514 Msa1446100:intron 35.0%
CAAGAAAACCTTAAACCCTA+TGG + tig0031267:16506-16525 None:intergenic 35.0%
TACTGCTACAAGAATATTGC+AGG + tig0031267:16560-16579 None:intergenic 35.0%
ATATTCTTGTAGCAGTAGCT+AGG - tig0031267:16563-16582 Msa1446100:intron 35.0%
TATTCTTGTAGCAGTAGCTA+GGG - tig0031267:16564-16583 Msa1446100:intron 35.0%
! TCTGTTGGGGGTATAAAAAA+TGG - tig0031267:16624-16643 Msa1446100:intron 35.0%
TTGGGTAATGAGATAACGTT+GGG + tig0031267:16697-16716 None:intergenic 35.0%
ATTGGGTAATGAGATAACGT+TGG + tig0031267:16698-16717 None:intergenic 35.0%
GAGTCTAACACAACTAGAAA+AGG + tig0031267:16761-16780 None:intergenic 35.0%
AAAATAGCAGCTTCAGATCA+AGG + tig0031267:16972-16991 None:intergenic 35.0%
!! TGAATTTGCTCTTTTTCTGG+AGG - tig0031267:16998-17017 Msa1446100:intron 35.0%
!! GAATTTGCTCTTTTTCTGGA+GGG - tig0031267:16999-17018 Msa1446100:intron 35.0%
CCATTACTGAATCTGGATTT+GGG + tig0031267:17297-17316 None:intergenic 35.0%
ACCATTACTGAATCTGGATT+TGG + tig0031267:17298-17317 None:intergenic 35.0%
TCATAATGTTCAGAGGTTGA+AGG + tig0031267:17430-17449 None:intergenic 35.0%
TTCAACCTCTGAACATTATG+AGG - tig0031267:17429-17448 Msa1446100:CDS 35.0%
AAATCATACACAGTCACTTG+CGG - tig0031267:17569-17588 Msa1446100:intron 35.0%
GCACTTAAAGAATGAAGGTT+TGG + tig0031267:17721-17740 None:intergenic 35.0%
CCAAAAGACAAAAGTTGAAG+TGG + tig0031267:17810-17829 None:intergenic 35.0%
! CCACTTCAACTTTTGTCTTT+TGG - tig0031267:17807-17826 Msa1446100:intron 35.0%
CTTAAATGAAGAAAACACCC+CGG + tig0031267:17875-17894 None:intergenic 35.0%
!! CTTGAATAGCTGATTTTCCA+AGG + tig0031267:18122-18141 None:intergenic 35.0%
CTTGGAAAATCAGCTATTCA+AGG - tig0031267:18120-18139 Msa1446100:intron 35.0%
AAAATCAGCTATTCAAGGGT+GGG - tig0031267:18125-18144 Msa1446100:intron 35.0%
AACAATCTTTGCCTTCTAAC+CGG + tig0031267:18356-18375 None:intergenic 35.0%
CAAAATATGAAGTAGCGCAT+GGG + tig0031267:18443-18462 None:intergenic 35.0%
ACAAAATATGAAGTAGCGCA+TGG + tig0031267:18444-18463 None:intergenic 35.0%
! GCGCTACTTCATATTTTGTT+TGG - tig0031267:18445-18464 Msa1446100:CDS 35.0%
CAAGTCTCATGATATTTGAC+AGG + tig0031267:18574-18593 None:intergenic 35.0%
!! TTTTTGTTTCAACTCCAGAC+GGG - tig0031267:18615-18634 Msa1446100:CDS 35.0%
TATAAAATTGAAGACCCGTC+TGG + tig0031267:18632-18651 None:intergenic 35.0%
! GACGGGTCTTCAATTTTATA+AGG - tig0031267:18632-18651 Msa1446100:CDS 35.0%
!! CTAGTTTTCACTATCTTGAG+GGG + tig0031267:18731-18750 None:intergenic 35.0%
! GATTTTCTAGGTAGGGAAAT+TGG - tig0031267:18750-18769 Msa1446100:intron 35.0%
GTGATTAGAACCTTCTTAGT+AGG - tig0031267:18778-18797 Msa1446100:intron 35.0%
TATTACACACAAGAAGCTTC+AGG + tig0031267:18941-18960 None:intergenic 35.0%
GCAATGTCATGTGATTAAGA+TGG - tig0031267:18996-19015 Msa1446100:CDS 35.0%
! GTGTGGTTTTCTTCTCAATT+GGG - tig0031267:19018-19037 Msa1446100:CDS 35.0%
AAATGTTCCGCAAATGACTT+TGG - tig0031267:19117-19136 Msa1446100:intron 35.0%
TTTGGAAAATATGGAAAGCC+AGG - tig0031267:19135-19154 Msa1446100:intron 35.0%
!!! TATTTTGAAGCCACTTGTTC+TGG - tig0031267:19321-19340 Msa1446100:intron 35.0%
! TTGTTCTGGTTGAGAATTGA+TGG - tig0031267:19335-19354 Msa1446100:intron 35.0%
! TATCGAATCTGATGATGAAG+AGG - tig0031267:19494-19513 Msa1446100:intron 35.0%
GTTGGAAAGTGGTTGTTAAA+AGG - tig0031267:19596-19615 Msa1446100:CDS 35.0%
! TCTAGGATTTAGAAAATGGG+TGG - tig0031267:19662-19681 Msa1446100:exon 35.0%
CTAGGATTTAGAAAATGGGT+GGG - tig0031267:19663-19682 Msa1446100:exon 35.0%
CATTTACATGACTCTACAGT+CGG + tig0031267:19897-19916 None:intergenic 35.0%
GAGTCATGTAAATGCTTATC+AGG - tig0031267:19903-19922 Msa1446100:intron 35.0%
GGTAATTGATGCAACTGATA+AGG - tig0031267:20069-20088 Msa1446100:five_prime_UTR 35.0%
ATAATCCTTGCAAAGCAGTT+TGG + tig0031267:20285-20304 None:intergenic 35.0%
TTTGCAAGGATTATGTGCTT+GGG - tig0031267:20291-20310 Msa1446100:five_prime_UTR 35.0%
TTCTTCACCAGCAGAAATAT+TGG + tig0031267:20352-20371 None:intergenic 35.0%
AGTAATCATACCTGTAGATG+GGG + tig0031267:20515-20534 None:intergenic 35.0%
CAAGTAATCATACCTGTAGA+TGG + tig0031267:20517-20536 None:intergenic 35.0%
!! CTGGAAGCATTCATTATTAC+TGG - tig0031267:20833-20852 Msa1446100:five_prime_UTR 35.0%
!!! TGGATGGAAGCATTTTAACG+CGG + tig0031267:12221-12240 None:intergenic 40.0%
AATGCTTCCATCCAAGTTCA+AGG - tig0031267:12227-12246 Msa1446100:intron 40.0%
AAGTACAGAGTCCTTGAACT+TGG + tig0031267:12241-12260 None:intergenic 40.0%
TTCAAGGACTCTGTACTTCT+CGG - tig0031267:12243-12262 Msa1446100:intron 40.0%
!! AGATCTAAGCTCGGTTTTGA+AGG - tig0031267:12303-12322 Msa1446100:intron 40.0%
GAAGGTGAGAATAGTGACAT+TGG - tig0031267:12321-12340 Msa1446100:intron 40.0%
GTTAAAGCGGAGAGTGAAAA+TGG - tig0031267:12489-12508 Msa1446100:intron 40.0%
ATTCCCCTTCTTGGAATTCA+TGG - tig0031267:12863-12882 Msa1446100:intron 40.0%
CCTATCCATGAATTCCAAGA+AGG + tig0031267:12871-12890 None:intergenic 40.0%
CCTTCTTGGAATTCATGGAT+AGG - tig0031267:12868-12887 Msa1446100:intron 40.0%
AACGAGCCAAATATTCTTGC+AGG + tig0031267:12930-12949 None:intergenic 40.0%
GTGACTTTCATAAGGCAATG+AGG - tig0031267:13018-13037 Msa1446100:intron 40.0%
ACTTTCATAAGGCAATGAGG+AGG - tig0031267:13021-13040 Msa1446100:intron 40.0%
TGATCATACACAACACGAAG+TGG + tig0031267:13166-13185 None:intergenic 40.0%
TGCCATTCTTCTTAGTAGGA+AGG - tig0031267:13297-13316 Msa1446100:intron 40.0%
GCTGTGATGGTTGTAATGTT+TGG - tig0031267:14041-14060 Msa1446100:intron 40.0%
CAATACCTTGAAACGTTTGC+TGG + tig0031267:14092-14111 None:intergenic 40.0%
!! CGTTTCAAGGTATTGTACCA+TGG - tig0031267:14097-14116 Msa1446100:intron 40.0%
AGAGAGATGTAGAACCATGT+TGG + tig0031267:14123-14142 None:intergenic 40.0%
TTACTATTGCCCAGATTGCA+AGG - tig0031267:14236-14255 Msa1446100:intron 40.0%
TACTATTGCCCAGATTGCAA+GGG - tig0031267:14237-14256 Msa1446100:intron 40.0%
CTTCTGTTTCCCATACTTGT+AGG - tig0031267:14331-14350 Msa1446100:intron 40.0%
TCTGTTTCCCATACTTGTAG+GGG - tig0031267:14333-14352 Msa1446100:intron 40.0%
CTTAATGCCCCTACAAGTAT+GGG + tig0031267:14343-14362 None:intergenic 40.0%
TGTGTTGCCTGAAAATCTAG+CGG - tig0031267:14440-14459 Msa1446100:intron 40.0%
AAGGGTAAGAGAAGAGAAAG+AGG + tig0031267:14739-14758 None:intergenic 40.0%
CAGGTTGTACAGCCAAAAAA+TGG - tig0031267:14959-14978 Msa1446100:CDS 40.0%
TTCATGGAAATTCCAGCTTG+GGG + tig0031267:15269-15288 None:intergenic 40.0%
CTTCATGGAAATTCCAGCTT+GGG + tig0031267:15270-15289 None:intergenic 40.0%
ACTTCATGGAAATTCCAGCT+TGG + tig0031267:15271-15290 None:intergenic 40.0%
! CAGGTGTTTTCCTTTTTGCA+AGG - tig0031267:15302-15321 Msa1446100:CDS 40.0%
TTTGCAGATGGGTAGAAGAT+TGG - tig0031267:15525-15544 Msa1446100:CDS 40.0%
TTGCAGATGGGTAGAAGATT+GGG - tig0031267:15526-15545 Msa1446100:CDS 40.0%
CAACACTCTCTTTCTACATC+AGG + tig0031267:15813-15832 None:intergenic 40.0%
! GTAGATGACATGCCTTTTAC+TGG + tig0031267:15843-15862 None:intergenic 40.0%
GGGGAAAAAGGCCATTTAAA+TGG + tig0031267:16254-16273 None:intergenic 40.0%
! AACTGATGTTGAGTTGCTGT+GGG - tig0031267:16368-16387 Msa1446100:intron 40.0%
ATGTAACATGTGCTTGGTTC+CGG - tig0031267:16394-16413 Msa1446100:intron 40.0%
TGGTTTCGGAAAACAACTTC+AGG + tig0031267:16420-16439 None:intergenic 40.0%
!! AGTTGTTTTCCGAAACCATG+AGG - tig0031267:16422-16441 Msa1446100:intron 40.0%
AGCAATCTTAAGGATTCCAG+AGG + tig0031267:16460-16479 None:intergenic 40.0%
AGGAACTAGGAGCAATCTTA+AGG + tig0031267:16470-16489 None:intergenic 40.0%
! TGCTCCTAGTTCCTTTTTGA+AGG - tig0031267:16476-16495 Msa1446100:intron 40.0%
TGGGTAATGAGATAACGTTG+GGG + tig0031267:16696-16715 None:intergenic 40.0%
! TTTCTGTTTCTTGTCCGCAT+TGG - tig0031267:16797-16816 Msa1446100:intron 40.0%
GTTTACAGATCACACAAGTC+TGG + tig0031267:16825-16844 None:intergenic 40.0%
GTGATCTGTAAACAAAGCCA+TGG - tig0031267:16832-16851 Msa1446100:intron 40.0%
AACAACTTGTACAGGAACCA+TGG + tig0031267:16852-16871 None:intergenic 40.0%
ACACTTGCAACAACTTGTAC+AGG + tig0031267:16860-16879 None:intergenic 40.0%
TTCATGTGATGTGTGCATCA+AGG - tig0031267:16890-16909 Msa1446100:CDS 40.0%
ATCAAGGATGGGATATAGCA+TGG - tig0031267:16906-16925 Msa1446100:CDS 40.0%
! TCAACATATTTTCCCAGCAG+CGG + tig0031267:17101-17120 None:intergenic 40.0%
TTGCGTTCTACAGTGAAGAA+GGG - tig0031267:17139-17158 Msa1446100:intron 40.0%
! CGGTTTTCCAAAAGAACACA+TGG + tig0031267:17246-17265 None:intergenic 40.0%
CCCAAATCCAGATTCAGTAA+TGG - tig0031267:17294-17313 Msa1446100:intron 40.0%
TGCACAACCATTACTGAATC+TGG + tig0031267:17304-17323 None:intergenic 40.0%
CTCAACCTCATAATGTTCAG+AGG + tig0031267:17437-17456 None:intergenic 40.0%
TTTGTAAACACGACACTTGG+CGG + tig0031267:17470-17489 None:intergenic 40.0%
! CCTTTTGTAAACACGACACT+TGG + tig0031267:17473-17492 None:intergenic 40.0%
! CCAAGTGTCGTGTTTACAAA+AGG - tig0031267:17470-17489 Msa1446100:intron 40.0%
TTACAAAAGGCCTCCCAATA+AGG - tig0031267:17483-17502 Msa1446100:intron 40.0%
CACCGATAATTCACTTGCTT+GGG - tig0031267:17692-17711 Msa1446100:CDS 40.0%
ACCGATAATTCACTTGCTTG+GGG - tig0031267:17693-17712 Msa1446100:CDS 40.0%
TTTGCTTTGTGATAGGATGC+CGG - tig0031267:17853-17872 Msa1446100:intron 40.0%
!! CGGGGTGTTTTCTTCATTTA+AGG - tig0031267:17873-17892 Msa1446100:intron 40.0%
AACTGACCTGTAAATGGTGA+AGG + tig0031267:17903-17922 None:intergenic 40.0%
GAAAATTGTAGAGTCTGCCT+TGG - tig0031267:18102-18121 Msa1446100:intron 40.0%
GAAAATCAGCTATTCAAGGG+TGG - tig0031267:18124-18143 Msa1446100:intron 40.0%
AAATCAGCTATTCAAGGGTG+GGG - tig0031267:18126-18145 Msa1446100:intron 40.0%
CTCGTAGAGATTTGCAAGAA+GGG - tig0031267:18157-18176 Msa1446100:intron 40.0%
TCGTAGAGATTTGCAAGAAG+GGG - tig0031267:18158-18177 Msa1446100:intron 40.0%
AGTATCGTGGTGAACAGTTA+AGG - tig0031267:18298-18317 Msa1446100:intron 40.0%
! TTGTTATTCTTCTGCGCACA+TGG + tig0031267:18509-18528 None:intergenic 40.0%
TAGAACCTTCTTAGTAGGGT+TGG - tig0031267:18783-18802 Msa1446100:intron 40.0%
TTTGTCCAACCCTACTAAGA+AGG + tig0031267:18791-18810 None:intergenic 40.0%
TGCTTATCATTTGATCTGCG+AGG - tig0031267:18898-18917 Msa1446100:intron 40.0%
TCATTTGATCTGCGAGGAAA+AGG - tig0031267:18904-18923 Msa1446100:intron 40.0%
GTCATGTGATTAAGATGGTG+TGG - tig0031267:19001-19020 Msa1446100:CDS 40.0%
! GGTGTGGTTTTCTTCTCAAT+TGG - tig0031267:19017-19036 Msa1446100:CDS 40.0%
GTAAAAACCAGTATGGTTCC+TGG + tig0031267:19156-19175 None:intergenic 40.0%
! TTGTTGATCCATGGCTTGTA+GGG + tig0031267:19281-19300 None:intergenic 40.0%
! TTTGTTGATCCATGGCTTGT+AGG + tig0031267:19282-19301 None:intergenic 40.0%
CAATTCTCAACCAGAACAAG+TGG + tig0031267:19334-19353 None:intergenic 40.0%
TCTGATTGTCCTAGAATGTG+AGG - tig0031267:19560-19579 Msa1446100:intron 40.0%
AAAAGAGCTCCTCACATTCT+AGG + tig0031267:19572-19591 None:intergenic 40.0%
! CTCTTTTCTCAGTTGGAAAG+TGG - tig0031267:19585-19604 Msa1446100:CDS 40.0%
GTTGCTGCTCATAAACTTGT+TGG - tig0031267:19628-19647 Msa1446100:CDS 40.0%
! TCAGGTTTCTTTTGGACTCT+TGG - tig0031267:19921-19940 Msa1446100:intron 40.0%
! CTTTTGGACTCTTGGTTATG+TGG - tig0031267:19929-19948 Msa1446100:intron 40.0%
GTTCAAGATTAGTGAGGAAG+TGG - tig0031267:20048-20067 Msa1446100:five_prime_UTR 40.0%
!! CTTTCGTTTTTCAGCATCAG+AGG + tig0031267:20171-20190 None:intergenic 40.0%
CTTTGCAAGGATTATGTGCT+TGG - tig0031267:20290-20309 Msa1446100:five_prime_UTR 40.0%
! ACCAGCAGAAATATTGGTCT+TGG + tig0031267:20346-20365 None:intergenic 40.0%
ATGGAGAGATATTTCCGGTA+AGG + tig0031267:20672-20691 None:intergenic 40.0%
CCTCAATGGAGAGATATTTC+CGG + tig0031267:20677-20696 None:intergenic 40.0%
TTACCCCACTTAGTGAGATA+AGG - tig0031267:20736-20755 Msa1446100:five_prime_UTR 40.0%
! AAGCCTTATCTCACTAAGTG+GGG + tig0031267:20742-20761 None:intergenic 40.0%
! CAAGCCTTATCTCACTAAGT+GGG + tig0031267:20743-20762 None:intergenic 40.0%
!!! AATTTTTTCCAGCCATGAGC+TGG - tig0031267:20814-20833 Msa1446100:five_prime_UTR 40.0%
TAATGAATGCTTCCAGCTCA+TGG + tig0031267:20829-20848 None:intergenic 40.0%
GGCTTCTTCTGAATCTGTGA+TGG + tig0031267:12081-12100 None:intergenic 45.0%
CAAATCGGTGGAAGCTGAAT+TGG + tig0031267:12151-12170 None:intergenic 45.0%
ACAGAGTCCTTGAACTTGGA+TGG + tig0031267:12237-12256 None:intergenic 45.0%
ATAGGATCAATGACGACAGC+AGG + tig0031267:12618-12637 None:intergenic 45.0%
!! ATGAATTGGTGATGTGCACC+TGG - tig0031267:12808-12827 Msa1446100:intron 45.0%
! TGTGTCCGTGTGTGTGATTT+TGG - tig0031267:12893-12912 Msa1446100:intron 45.0%
GAGGCAATGTTGGCAGATAA+TGG - tig0031267:13040-13059 Msa1446100:intron 45.0%
! GTTGGCAGATAATGGCATTC+TGG - tig0031267:13048-13067 Msa1446100:intron 45.0%
TAGAGCTGAGCAAATTGTGG+AGG - tig0031267:13081-13100 Msa1446100:intron 45.0%
AGAGCTGAGCAAATTGTGGA+GGG - tig0031267:13082-13101 Msa1446100:intron 45.0%
GTGATATTCCTGTTCAGCAC+AGG + tig0031267:13116-13135 None:intergenic 45.0%
GAACAGGAATATCACTGCCA+AGG - tig0031267:13121-13140 Msa1446100:intron 45.0%
GCAACTAATGCATGTAGCCT+AGG + tig0031267:13280-13299 None:intergenic 45.0%
!! ACTCTTGCTGTTTCCTTCAG+TGG + tig0031267:13402-13421 None:intergenic 45.0%
ACGATGCATGCCATATCATG+AGG - tig0031267:13426-13445 Msa1446100:intron 45.0%
ATTTGGCACCATTCTGATGC+TGG - tig0031267:13906-13925 Msa1446100:intron 45.0%
ACCATTCTGATGCTGGTGAT+TGG - tig0031267:13913-13932 Msa1446100:intron 45.0%
CCATTCTGATGCTGGTGATT+GGG - tig0031267:13914-13933 Msa1446100:intron 45.0%
CTTCTCAATTAGTGTCTGCC+TGG - tig0031267:13947-13966 Msa1446100:intron 45.0%
CTGACTTAGGTATGCTGTGA+TGG - tig0031267:14028-14047 Msa1446100:intron 45.0%
GTATTGTACCATGGCCAACA+TGG - tig0031267:14106-14125 Msa1446100:intron 45.0%
ATGTAGAACCATGTTGGCCA+TGG + tig0031267:14117-14136 None:intergenic 45.0%
CTTTGCTTGTTTGATGTCCC+TGG - tig0031267:14153-14172 Msa1446100:intron 45.0%
! ACTGACTGGTTATTTGACGC+AGG - tig0031267:14197-14216 Msa1446100:intron 45.0%
TGGTTATTTGACGCAGGATC+TGG - tig0031267:14203-14222 Msa1446100:intron 45.0%
GCTTAATGCCCCTACAAGTA+TGG + tig0031267:14344-14363 None:intergenic 45.0%
TTTCAGGCAACACAGGTCTT+TGG + tig0031267:14434-14453 None:intergenic 45.0%
!! GCTAGATTTTCAGGCAACAC+AGG + tig0031267:14441-14460 None:intergenic 45.0%
AATTTGTCTGCAGCATGGAG+AGG + tig0031267:14575-14594 None:intergenic 45.0%
TGGGTCAAAAAAGCAGGCAT+TGG - tig0031267:14918-14937 Msa1446100:intron 45.0%
!! AAAAGCAGGCATTGGCTGAA+TGG - tig0031267:14926-14945 Msa1446100:intron 45.0%
!! AAAGCAGGCATTGGCTGAAT+GGG - tig0031267:14927-14946 Msa1446100:intron 45.0%
CACAGTACACACAACACTAC+AGG + tig0031267:15163-15182 None:intergenic 45.0%
ATGGACAACAGAGAGATGTG+CGG - tig0031267:15502-15521 Msa1446100:intron 45.0%
ACTCTTGGTGAACAGCAACT+TGG + tig0031267:15731-15750 None:intergenic 45.0%
TCTTTGCACCATAGCACTCT+TGG + tig0031267:15746-15765 None:intergenic 45.0%
TTCACACACTCTACAAACCC+AGG + tig0031267:15787-15806 None:intergenic 45.0%
TGTTGCCTCTGTCCAGTAAA+AGG - tig0031267:15828-15847 Msa1446100:intron 45.0%
! ACATGCCTTTTACTGGACAG+AGG + tig0031267:15836-15855 None:intergenic 45.0%
AATGGTAAGGCGACAATGCT+AGG + tig0031267:16236-16255 None:intergenic 45.0%
ATATGGGGGAAACTCTTTGC+AGG - tig0031267:16330-16349 Msa1446100:CDS 45.0%
CACAGCAACTCAACATCAGT+TGG + tig0031267:16369-16388 None:intergenic 45.0%
! CAACTGATGTTGAGTTGCTG+TGG - tig0031267:16367-16386 Msa1446100:intron 45.0%
GGGTTCATGTAACATGTGCT+TGG - tig0031267:16388-16407 Msa1446100:intron 45.0%
TTCGGAAAACAACTTCAGGC+CGG + tig0031267:16416-16435 None:intergenic 45.0%
TTTCCGAAACCATGAGGCAA+TGG - tig0031267:16428-16447 Msa1446100:intron 45.0%
GTTCCATTGCCTCATGGTTT+CGG + tig0031267:16434-16453 None:intergenic 45.0%
ATCTTAAGGATTCCAGAGGC+AGG + tig0031267:16456-16475 None:intergenic 45.0%
TGTGATGTGTGCATCAAGGA+TGG - tig0031267:16894-16913 Msa1446100:CDS 45.0%
GTGATGTGTGCATCAAGGAT+GGG - tig0031267:16895-16914 Msa1446100:CDS 45.0%
GTTGCGTTCTACAGTGAAGA+AGG - tig0031267:17138-17157 Msa1446100:intron 45.0%
TGCGTTCTACAGTGAAGAAG+GGG - tig0031267:17140-17159 Msa1446100:intron 45.0%
AATCTCAAGGGACGCTTTAG+AGG - tig0031267:17364-17383 Msa1446100:intron 45.0%
GTTCAGAGGTTGAAGGTTCA+AGG + tig0031267:17423-17442 None:intergenic 45.0%
TTATCGGTGCATCATCCTTC+TGG + tig0031267:17681-17700 None:intergenic 45.0%
! GCACCGATAATTCACTTGCT+TGG - tig0031267:17691-17710 Msa1446100:CDS 45.0%
CCCCCAAGCAAGTGAATTAT+CGG + tig0031267:17697-17716 None:intergenic 45.0%
CCGATAATTCACTTGCTTGG+GGG - tig0031267:17694-17713 Msa1446100:CDS 45.0%
TTGCTTTGTGATAGGATGCC+GGG - tig0031267:17854-17873 Msa1446100:intron 45.0%
GCTCGTAGAGATTTGCAAGA+AGG - tig0031267:18156-18175 Msa1446100:intron 45.0%
AGATTTGCAAGAAGGGGACA+TGG - tig0031267:18164-18183 Msa1446100:intron 45.0%
ATACTCAACAACCTGCAGAC+AGG + tig0031267:18283-18302 None:intergenic 45.0%
ATCTGAGGGAAGCAAAGTAC+CGG - tig0031267:18334-18353 Msa1446100:intron 45.0%
!! GAAGCAAAGTACCGGTTAGA+AGG - tig0031267:18342-18361 Msa1446100:intron 45.0%
ATGTGCTAACTGATCTGAGC+AGG + tig0031267:19096-19115 None:intergenic 45.0%
!! CTCTGGGGTAAAAACCAGTA+TGG + tig0031267:19163-19182 None:intergenic 45.0%
!!! CATACTGGTTTTTACCCCAG+AGG - tig0031267:19161-19180 Msa1446100:intron 45.0%
! TGAGGAGCTCTTTTCTCAGT+TGG - tig0031267:19578-19597 Msa1446100:CDS 45.0%
! TGTTGGTCTAGCTAGACTCT+AGG - tig0031267:19645-19664 Msa1446100:CDS 45.0%
GCAGCTGTTCAAGATTAGTG+AGG - tig0031267:20042-20061 Msa1446100:five_prime_UTR 45.0%
GATTATGTGCTTGGGAGATC+AGG - tig0031267:20299-20318 Msa1446100:five_prime_UTR 45.0%
! GCCAAGACCAATATTTCTGC+TGG - tig0031267:20342-20361 Msa1446100:five_prime_UTR 45.0%
! GCTTCTTTTTCCCCATCTAC+AGG - tig0031267:20502-20521 Msa1446100:five_prime_UTR 45.0%
AGATGAGCGAGATGAACTCA+AGG - tig0031267:20545-20564 Msa1446100:five_prime_UTR 45.0%
! GTTTTGCATTGTTTCGGACG+AGG - tig0031267:20626-20645 Msa1446100:five_prime_UTR 45.0%
CTGCACTAAGCAAACCTTAC+CGG - tig0031267:20655-20674 Msa1446100:five_prime_UTR 45.0%
CCGGAAATATCTCTCCATTG+AGG - tig0031267:20674-20693 Msa1446100:five_prime_UTR 45.0%
! CCAAGCCTTATCTCACTAAG+TGG + tig0031267:20744-20763 None:intergenic 45.0%
CCACTTAGTGAGATAAGGCT+TGG - tig0031267:20741-20760 Msa1446100:five_prime_UTR 45.0%
!!! AAAAATTAATATATTGATTA+TGG + tig0031267:17043-17062 None:intergenic 5.0%
!!! AATCAATATATTAATTTTTA+TGG - tig0031267:17044-17063 Msa1446100:intron 5.0%
!! ATATATATATATATAAGATA+TGG + tig0031267:17959-17978 None:intergenic 5.0%
!!! ATAAATGATTTAATTTAATT+TGG + tig0031267:19841-19860 None:intergenic 5.0%
! GCGTTTTACTCTGTCCGTGA+TGG - tig0031267:12114-12133 Msa1446100:CDS 50.0%
!! AAGCATTTTAACGCGGCCTC+TGG + tig0031267:12214-12233 None:intergenic 50.0%
GACTCGGGAGCTTGCAAAAT+AGG + tig0031267:12636-12655 None:intergenic 50.0%
AAGCTCCCGAGTCTGTTCTT+AGG - tig0031267:12643-12662 Msa1446100:CDS 50.0%
ACAGCGCCTAAGAACAGACT+CGG + tig0031267:12652-12671 None:intergenic 50.0%
AGGCAATGAGGAGGCAATGT+TGG - tig0031267:13030-13049 Msa1446100:intron 50.0%
TGCAACTTCCTGTGCTGAAC+AGG - tig0031267:13105-13124 Msa1446100:intron 50.0%
CCCAATCACCAGCATCAGAA+TGG + tig0031267:13917-13936 None:intergenic 50.0%
!! ATGGGGCTGAACACTGACTT+AGG - tig0031267:14015-14034 Msa1446100:intron 50.0%
CCGACTTTCCCTTGCAATCT+GGG + tig0031267:14248-14267 None:intergenic 50.0%
CCCAGATTGCAAGGGAAAGT+CGG - tig0031267:14245-14264 Msa1446100:intron 50.0%
TCCGACTTTCCCTTGCAATC+TGG + tig0031267:14249-14268 None:intergenic 50.0%
GTTGCCTGAAAATCTAGCGG+TGG - tig0031267:14443-14462 Msa1446100:intron 50.0%
! CACACCACCGCTAGATTTTC+AGG + tig0031267:14450-14469 None:intergenic 50.0%
AATCTAGCGGTGGTGTGCAA+TGG - tig0031267:14453-14472 Msa1446100:intron 50.0%
GTGGTGTGCAATGGCTTGAA+AGG - tig0031267:14462-14481 Msa1446100:intron 50.0%
TTGTGCAAGTGTAGCACGTG+TGG - tig0031267:14898-14917 Msa1446100:intron 50.0%
TGTGCAAGTGTAGCACGTGT+GGG - tig0031267:14899-14918 Msa1446100:intron 50.0%
CACGTGTGGGTCAAAAAAGC+AGG - tig0031267:14912-14931 Msa1446100:intron 50.0%
!! AGGCATTGGCTGAATGGGAA+CGG - tig0031267:14932-14951 Msa1446100:intron 50.0%
AGAGATGTGCGGTTTGCAGA+TGG - tig0031267:15513-15532 Msa1446100:intron 50.0%
GAGATGTGCGGTTTGCAGAT+GGG - tig0031267:15514-15533 Msa1446100:intron 50.0%
!! GCTGTTCACCAAGAGTGCTA+TGG - tig0031267:15735-15754 Msa1446100:intron 50.0%
ACACAAGTCTGGCACCAATG+CGG + tig0031267:16814-16833 None:intergenic 50.0%
AGCAGCTTCAGATCAAGGAC+TGG + tig0031267:16967-16986 None:intergenic 50.0%
ATGGCAATTACTTCCGCTGC+TGG - tig0031267:17085-17104 Msa1446100:intron 50.0%
TGGCAATTACTTCCGCTGCT+GGG - tig0031267:17086-17105 Msa1446100:intron 50.0%
CAGTTCACAGGTTTGAGCTC+AGG - tig0031267:17194-17213 Msa1446100:CDS 50.0%
AATGGTTGTGCATACCCCTC+TGG - tig0031267:17312-17331 Msa1446100:intron 50.0%
ATGGTTGTGCATACCCCTCT+GGG - tig0031267:17313-17332 Msa1446100:intron 50.0%
TTGGAGAGAATACCCCCAGA+GGG + tig0031267:17330-17349 None:intergenic 50.0%
TGCTTTGTGATAGGATGCCG+GGG - tig0031267:17855-17874 Msa1446100:intron 50.0%
GGAACGCCTTCACCATTTAC+AGG - tig0031267:17894-17913 Msa1446100:intron 50.0%
! CTGCAGGTTGTTGAGTATCG+TGG - tig0031267:18285-18304 Msa1446100:intron 50.0%
! GCGTAGTGTTGCTGATCTGA+GGG - tig0031267:18320-18339 Msa1446100:intron 50.0%
! TTTTGCTCCAAGCCACTTGC+CGG - tig0031267:18416-18435 Msa1446100:CDS 50.0%
ACTGAAGCAGCCAAGAGTTG+AGG + tig0031267:19067-19086 None:intergenic 50.0%
TCAACTCTTGGCTGCTTCAG+TGG - tig0031267:19066-19085 Msa1446100:intron 50.0%
TGGAAAGCCAGGAACCATAC+TGG - tig0031267:19146-19165 Msa1446100:intron 50.0%
CTCGACTGCAGAATTCATCC+TGG - tig0031267:19191-19210 Msa1446100:intron 50.0%
GGCATTCTCTCTGTAGTACC+AGG + tig0031267:19212-19231 None:intergenic 50.0%
! TGCTGTTCTAGCTGAAGCGT+TGG - tig0031267:19419-19438 Msa1446100:intron 50.0%
! GCTGTTCTAGCTGAAGCGTT+GGG - tig0031267:19420-19439 Msa1446100:intron 50.0%
GCATGCCAAACTGCTTTGCA+AGG - tig0031267:20277-20296 Msa1446100:five_prime_UTR 50.0%
TACAATTGGGGGCTTTGCAG+TGG + tig0031267:20578-20597 None:intergenic 50.0%
ACTGCAAAGCCCCCAATTGT+AGG - tig0031267:20577-20596 Msa1446100:five_prime_UTR 50.0%
GAGTTTGGAAGTGGAGTCTG+TGG + tig0031267:20859-20878 None:intergenic 50.0%
TGGAGTGGATCTCGCCATCA+CGG + tig0031267:12131-12150 None:intergenic 55.0%
CGGTGGAAGCTGAATTGGAG+TGG + tig0031267:12146-12165 None:intergenic 55.0%
CTGGATGATCGCGACAATGG+AGG + tig0031267:12195-12214 None:intergenic 55.0%
CCTCTGGATGATCGCGACAA+TGG + tig0031267:12198-12217 None:intergenic 55.0%
CCATTGTCGCGATCATCCAG+AGG - tig0031267:12195-12214 Msa1446100:intron 55.0%
! GTGGCAAGACTTTTCCGGCA+TGG - tig0031267:12592-12611 Msa1446100:intron 55.0%
CAGCGCCTAAGAACAGACTC+GGG + tig0031267:12651-12670 None:intergenic 55.0%
!! ATTGGTGATGTGCACCTGGC+AGG - tig0031267:12812-12831 Msa1446100:intron 55.0%
GGGGATGGTATTCCCCTTCT+TGG - tig0031267:12854-12873 Msa1446100:intron 55.0%
TGTACAATCGGGTATGCCCC+TGG + tig0031267:12986-13005 None:intergenic 55.0%
GGAATATCACTGCCAAGGCC+AGG - tig0031267:13126-13145 Msa1446100:intron 55.0%
GCTGAATGGGAACGGCATAC+AGG - tig0031267:14940-14959 Msa1446100:intron 55.0%
ACGGAACACAATCCCCAAGC+TGG - tig0031267:15254-15273 Msa1446100:CDS 55.0%
TGGGGGAAACTCTTTGCAGG+TGG - tig0031267:16333-16352 Msa1446100:CDS 55.0%
AGGCAGGTTCCATTGCCTCA+TGG + tig0031267:16440-16459 None:intergenic 55.0%
TGGTTGTGCATACCCCTCTG+GGG - tig0031267:17314-17333 Msa1446100:intron 55.0%
TGGAGAGAATACCCCCAGAG+GGG + tig0031267:17329-17348 None:intergenic 55.0%
CTTGGAGAGAATACCCCCAG+AGG + tig0031267:17331-17350 None:intergenic 55.0%
TGCTTCATGTGCCTGTCTGC+AGG - tig0031267:18269-18288 Msa1446100:CDS 55.0%
! GGCGTAGTGTTGCTGATCTG+AGG - tig0031267:18319-18338 Msa1446100:intron 55.0%
TTTGCTCCAAGCCACTTGCC+GGG - tig0031267:18417-18436 Msa1446100:CDS 55.0%
TATGAAGTAGCGCATGGGCC+CGG + tig0031267:18438-18457 None:intergenic 55.0%
AGTCGAGACAGCAACCTCTG+GGG + tig0031267:19178-19197 None:intergenic 55.0%
CAGTCGAGACAGCAACCTCT+GGG + tig0031267:19179-19198 None:intergenic 55.0%
ACTACCTCGAGGTTGGGTGA+TGG + tig0031267:19258-19277 None:intergenic 55.0%
GTAGGGACTACCTCGAGGTT+GGG + tig0031267:19264-19283 None:intergenic 55.0%
TGTAGGGACTACCTCGAGGT+TGG + tig0031267:19265-19284 None:intergenic 55.0%
GAGGTAGTCCCTACAAGCCA+TGG - tig0031267:19270-19289 Msa1446100:intron 55.0%
GAATGCTTCCAGCTCATGGC+TGG + tig0031267:20825-20844 None:intergenic 55.0%
ATGACGACAGCAGGCCATGC+CGG + tig0031267:12609-12628 None:intergenic 60.0%
CACCTGGCAGGACTATGCGT+GGG - tig0031267:12824-12843 Msa1446100:intron 60.0%
GACTATGCGTGGGCGAAGCA+GGG - tig0031267:12834-12853 Msa1446100:intron 60.0%
ACTATGCGTGGGCGAAGCAG+GGG - tig0031267:12835-12854 Msa1446100:intron 60.0%
GAGGCAATGGAACCTGCCTC+TGG - tig0031267:16441-16460 Msa1446100:intron 60.0%
GGTTGTGCATACCCCTCTGG+GGG - tig0031267:17315-17334 Msa1446100:intron 60.0%
CGACACTTGGCGGCAGATAG+TGG + tig0031267:17460-17479 None:intergenic 60.0%
GCAGTCGAGACAGCAACCTC+TGG + tig0031267:19180-19199 None:intergenic 60.0%
! AGGTTGGGTGATGGCCTGAG+GGG + tig0031267:19249-19268 None:intergenic 60.0%
! GAGGTTGGGTGATGGCCTGA+GGG + tig0031267:19250-19269 None:intergenic 60.0%
GGCTTGTAGGGACTACCTCG+AGG + tig0031267:19269-19288 None:intergenic 60.0%
!! CTGAAGCGTTGGGCACAGAG+TGG - tig0031267:19430-19449 Msa1446100:intron 60.0%
GCTTGGGAGATCAGGAGAGC+AGG - tig0031267:20307-20326 Msa1446100:five_prime_UTR 60.0%
TTGGGGGCTTTGCAGTGGCA+GGG + tig0031267:20573-20592 None:intergenic 60.0%
ATTGGGGGCTTTGCAGTGGC+AGG + tig0031267:20574-20593 None:intergenic 60.0%
GCACCTGGCAGGACTATGCG+TGG - tig0031267:12823-12842 Msa1446100:intron 65.0%
GGACTATGCGTGGGCGAAGC+AGG - tig0031267:12833-12852 Msa1446100:intron 65.0%
TGAGGGGGGGTTGGGAACAG+AGG + tig0031267:19233-19252 None:intergenic 65.0%
TCTGTTCCCAACCCCCCCTC+AGG - tig0031267:19232-19251 Msa1446100:intron 65.0%
TGATGGCCTGAGGGGGGGTT+GGG + tig0031267:19241-19260 None:intergenic 65.0%
! TTGGGTGATGGCCTGAGGGG+GGG + tig0031267:19246-19265 None:intergenic 65.0%
! GTTGGGTGATGGCCTGAGGG+GGG + tig0031267:19247-19266 None:intergenic 65.0%
! GGTTGGGTGATGGCCTGAGG+GGG + tig0031267:19248-19267 None:intergenic 65.0%
! CGAGGTTGGGTGATGGCCTG+AGG + tig0031267:19251-19270 None:intergenic 65.0%
CAGGCCATCACCCAACCTCG+AGG - tig0031267:19251-19270 Msa1446100:intron 65.0%
CGCCCACGCATAGTCCTGCC+AGG + tig0031267:12829-12848 None:intergenic 70.0%
TGCGTGGGCGAAGCAGGGGA+TGG - tig0031267:12839-12858 Msa1446100:intron 70.0%
CATGGGCCCGGCAAGTGGCT+TGG + tig0031267:18426-18445 None:intergenic 70.0%
TAGCGCATGGGCCCGGCAAG+TGG + tig0031267:18431-18450 None:intergenic 70.0%
GTGATGGCCTGAGGGGGGGT+TGG + tig0031267:19242-19261 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0031267 gene 11840 20879 11840 ID=Msa1446100;Name=Msa1446100
tig0031267 mRNA 11840 20879 11840 ID=Msa1446100-mRNA-1;Parent=Msa1446100;Name=Msa1446100-mRNA-1;_AED=0.20;_eAED=0.20;_QI=1011|0.90|0.90|1|0.85|0.86|22|265|648
tig0031267 exon 11840 12195 11840 ID=Msa1446100-mRNA-1:exon:15320;Parent=Msa1446100-mRNA-1
tig0031267 exon 12343 12443 12343 ID=Msa1446100-mRNA-1:exon:15319;Parent=Msa1446100-mRNA-1
tig0031267 exon 12599 12673 12599 ID=Msa1446100-mRNA-1:exon:15318;Parent=Msa1446100-mRNA-1
tig0031267 exon 14342 14428 14342 ID=Msa1446100-mRNA-1:exon:15317;Parent=Msa1446100-mRNA-1
tig0031267 exon 14534 14623 14534 ID=Msa1446100-mRNA-1:exon:15316;Parent=Msa1446100-mRNA-1
tig0031267 exon 14804 14851 14804 ID=Msa1446100-mRNA-1:exon:15315;Parent=Msa1446100-mRNA-1
tig0031267 exon 14954 15037 14954 ID=Msa1446100-mRNA-1:exon:15314;Parent=Msa1446100-mRNA-1
tig0031267 exon 15215 15428 15215 ID=Msa1446100-mRNA-1:exon:15313;Parent=Msa1446100-mRNA-1
tig0031267 exon 15516 15580 15516 ID=Msa1446100-mRNA-1:exon:15312;Parent=Msa1446100-mRNA-1
tig0031267 exon 16222 16353 16222 ID=Msa1446100-mRNA-1:exon:15311;Parent=Msa1446100-mRNA-1
tig0031267 exon 16877 16994 16877 ID=Msa1446100-mRNA-1:exon:15310;Parent=Msa1446100-mRNA-1
tig0031267 exon 17143 17242 17143 ID=Msa1446100-mRNA-1:exon:15309;Parent=Msa1446100-mRNA-1
tig0031267 exon 17396 17468 17396 ID=Msa1446100-mRNA-1:exon:15308;Parent=Msa1446100-mRNA-1
tig0031267 exon 17690 17825 17690 ID=Msa1446100-mRNA-1:exon:15307;Parent=Msa1446100-mRNA-1
tig0031267 exon 18211 18303 18211 ID=Msa1446100-mRNA-1:exon:15306;Parent=Msa1446100-mRNA-1
tig0031267 exon 18409 18500 18409 ID=Msa1446100-mRNA-1:exon:15305;Parent=Msa1446100-mRNA-1
tig0031267 exon 18614 18682 18614 ID=Msa1446100-mRNA-1:exon:15304;Parent=Msa1446100-mRNA-1
tig0031267 exon 18784 18852 18784 ID=Msa1446100-mRNA-1:exon:15303;Parent=Msa1446100-mRNA-1
tig0031267 exon 18951 19058 18951 ID=Msa1446100-mRNA-1:exon:15302;Parent=Msa1446100-mRNA-1
tig0031267 exon 19572 19739 19572 ID=Msa1446100-mRNA-1:exon:15301;Parent=Msa1446100-mRNA-1
tig0031267 exon 19830 19885 19830 ID=Msa1446100-mRNA-1:exon:15300;Parent=Msa1446100-mRNA-1
tig0031267 exon 19991 20879 19991 ID=Msa1446100-mRNA-1:exon:15299;Parent=Msa1446100-mRNA-1
tig0031267 five_prime_UTR 19991 20879 19991 ID=Msa1446100-mRNA-1:five_prime_utr;Parent=Msa1446100-mRNA-1
tig0031267 five_prime_UTR 19830 19885 19830 ID=Msa1446100-mRNA-1:five_prime_utr;Parent=Msa1446100-mRNA-1
tig0031267 five_prime_UTR 19674 19739 19674 ID=Msa1446100-mRNA-1:five_prime_utr;Parent=Msa1446100-mRNA-1
tig0031267 CDS 19572 19673 19572 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 18951 19058 18951 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 18784 18852 18784 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 18614 18682 18614 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 18409 18500 18409 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 18211 18303 18211 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 17690 17825 17690 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 17396 17468 17396 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 17143 17242 17143 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 16877 16994 16877 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 16222 16353 16222 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 15516 15580 15516 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 15215 15428 15215 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 14954 15037 14954 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 14804 14851 14804 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 14534 14623 14534 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 14342 14428 14342 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 12599 12673 12599 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 12343 12443 12343 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 CDS 12105 12195 12105 ID=Msa1446100-mRNA-1:cds;Parent=Msa1446100-mRNA-1
tig0031267 three_prime_UTR 11840 12104 11840 ID=Msa1446100-mRNA-1:three_prime_utr;Parent=Msa1446100-mRNA-1
Gene Sequence

>Msa1446100

ATGTTGGCAGATAATGGCATTCTGGATCCACATTATAGAGCTGAGCAAATTGTGGAGGGTGCAACTTCCTGTGCTGAACAGGAATATCACTGCCAAGGCCAGGATACAATATCTTGTTATGGCTGCGGTTTGACGTTGCCATGCAAAACCATGAAGAAGATTAAGGATTCAAGCTGTGCTCCTCAGCATTATTGTAAATCTTGTGCAAAGTTACTTAAATCGAAACAATACTGTGGCATTTGCAAAAAGATTTGGCACCATTCTGATGCTGGTGATTGGGTATGCTGTGATGGTTGTAATGTTTGGGTGCATGCTGAGTGTGACAAAATTTCCAGCAAACGTTTCAAGGATCTGGAAAATATAGATTACTATTGCCCAGATTGCAAGGGAAAGTCGGATCGTAAATTATCCACATCACAAACATACAAATCAAAAATCAAATCAGTAGAAAACAACCAAAGACCTGTGTTGCCTGAAAATCTAGCGGTGGTGTGCAATGGCTTGAAAGGAATATACTTTCCAAAACTTCATTTAGTTTTGTGCAAGTGTAGCACGTGTGGGTCAAAAAAGCAGGCATTGGCTGAATGGGAACGGCATACAGGTTGTACAGCCAAAAAATGGAAACATAGTGTGAAAGTAGAAGGCACAATGCAACCACTAATAAAATGGATCACGGAACACAATCCCCAAGCTGGAATTTCCATGAAGTTAAGTCAGAAACAGGTGTTTTCCTTTTTGCAAGAAAAATATGAACCAGTTTATGCAAAATGGACAACAGAGAGATGTGCGGTTTGCAGATGGGTAGAAGATTGGGAAGATAACAAGATTATTATATGTAACAGATGCCAAGTTGCTGTTCACCAAGAGTGCTATGGTGCAAAGAATCTCCAAGATTTTACTTCCTGGGTTTGTAGAGTGTGTGAAACTCCTGATGTAGAAAGAGAGTGTTGCCTCTGTCCACCAACTGATGTTGAGTTGCTGTGGGTTCATGTAACATGTGCTTGGTTCCGGCCTGAAGTTGTTTTCCGAAACCATGAGGCAATGGAACCTGCCTCTGGAATCCTTAAGATTGCTCCTAGTTCCTTTTTGAAGTTGCGTTCTACAGTGAAGAAGGGGACTCAAATAACGCAGACGCTAATATATTGTGCAGTTCACAGGATCCCAAATCCAGATTCAGTAATGGTTGTGCATACCCCTCTGGGGGTATTCTCTCCAAGAACTTCACTTCAAAATCTCAAGGGACGCTTTAGAGGATCAAAGCTTATTTCATCAAATAACTTAGAACTCCTTGAACCTTCAACCTCTGAACATTATGAGGTTGAGCCACTATCTGCCGCCAAGTGTCGTGTTTACAAAAGGCCTCCCAATAAGAAGGATGATGCACCGATAATTCACTTGCTTGGGGGACCAAACCTTCATTCTTTAAGTGCAATAACTCAATTGAACAACAATACGGATGCCGGGGTGTTTTCTTCATTTAAGGAACGCCTTCACCATTTACAGAAAACGGAAAATTGTAGAGTCTGCCTTGGAAAATCAGCTATTCAAGGGTGGGGTCTCTTTGCTCGTAGAGATTTGCAAGAAGGGGACATGGTTGTTGAGTATCGTGGTGAACAGTTAAGGCGTAGTGTTGCTGATCTGAGGGAAGCAAAGTACCGGTTAGAAGGCAAAGATTGTTATCTGTTCAAGATTAGTGAGGAAGTGGTAATTGATGCAACTGATAAGGGCAATATTGCACGTCTAATAAATCATTCTTGCATGCCAAACTGCTTTGCAAGGATTATGTGCTTGGGAGATCAGGAGAGCAGGATTGTTCTTATTGCCAAGACCAATATTTCTGCTGGTGAAGAACTAACGTATGATTACTTGTTCGATACAGATGAGCGAGATGAACTCAAGGTTCCCTGCCACTGCAAAGCCCCCAATTGTAGGAAATTTATGAACTAG
Protein sequence

>Msa1446100

MLADNGILDPHYRAEQIVEGATSCAEQEYHCQGQDTISCYGCGLTLPCKTMKKIKDSSCAPQHYCKSCAKLLKSKQYCGICKKIWHHSDAGDWVCCDGCNVWVHAECDKISSKRFKDLENIDYYCPDCKGKSDRKLSTSQTYKSKIKSVENNQRPVLPENLAVVCNGLKGIYFPKLHLVLCKCSTCGSKKQALAEWERHTGCTAKKWKHSVKVEGTMQPLIKWITEHNPQAGISMKLSQKQVFSFLQEKYEPVYAKWTTERCAVCRWVEDWEDNKIIICNRCQVAVHQECYGAKNLQDFTSWVCRVCETPDVERECCLCPPTDVELLWVHVTCAWFRPEVVFRNHEAMEPASGILKIAPSSFLKLRSTVKKGTQITQTLIYCAVHRIPNPDSVMVVHTPLGVFSPRTSLQNLKGRFRGSKLISSNNLELLEPSTSEHYEVEPLSAAKCRVYKRPPNKKDDAPIIHLLGGPNLHSLSAITQLNNNTDAGVFSSFKERLHHLQKTENCRVCLGKSAIQGWGLFARRDLQEGDMVVEYRGEQLRRSVADLREAKYRLEGKDCYLFKISEEVVIDATDKGNIARLINHSCMPNCFARIMCLGDQESRIVLIAKTNISAGEELTYDYLFDTDERDELKVPCHCKAPNCRKFMN*