Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038210 | KEH24566.1 | 87.739 | 522 | 38 | 3 | 1 | 508 | 1 | 510 | 0.0 | 882 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038210 | sp|Q9SR13|FLK_ARATH | 66.890 | 447 | 119 | 12 | 78 | 507 | 143 | 577 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038210 | A0A072U5B1 | 87.739 | 522 | 38 | 3 | 1 | 508 | 1 | 510 | 0.0 | 882 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005000 | Msa1038210 | 0.866304 | 3.145381e-65 | -8.615850e-47 |
| Msa0053050 | Msa1038210 | 0.858169 | 9.908249e-63 | -8.615850e-47 |
| Msa0090030 | Msa1038210 | -0.811751 | 5.984183e-51 | -8.615850e-47 |
| Msa0098390 | Msa1038210 | 0.867306 | 1.508125e-65 | -8.615850e-47 |
| Msa0112300 | Msa1038210 | 0.816238 | 6.131095e-52 | -8.615850e-47 |
| Msa0609970 | Msa1038210 | -0.818076 | 2.366559e-52 | -8.615850e-47 |
| Msa0620330 | Msa1038210 | -0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0626680 | Msa1038210 | -0.818259 | 2.151448e-52 | -8.615850e-47 |
| Msa0652760 | Msa1038210 | -0.809845 | 1.547098e-50 | -8.615850e-47 |
| Msa0653320 | Msa1038210 | 0.809563 | 1.779169e-50 | -8.615850e-47 |
| Msa0664760 | Msa1038210 | -0.804647 | 1.954068e-49 | -8.615850e-47 |
| Msa0735620 | Msa1038210 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa0747720 | Msa1038210 | 0.861804 | 7.932694e-64 | -8.615850e-47 |
| Msa0750330 | Msa1038210 | 0.812386 | 4.351309e-51 | -8.615850e-47 |
| Msa0758230 | Msa1038210 | -0.804169 | 2.458138e-49 | -8.615850e-47 |
| Msa0790170 | Msa1038210 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0814630 | Msa1038210 | 0.817943 | 2.536822e-52 | -8.615850e-47 |
| Msa0140400 | Msa1038210 | -0.811008 | 8.676066e-51 | -8.615850e-47 |
| Msa0140510 | Msa1038210 | 0.839238 | 1.785846e-57 | -8.615850e-47 |
| Msa0140520 | Msa1038210 | 0.862019 | 6.815029e-64 | -8.615850e-47 |
| Msa0175290 | Msa1038210 | 0.816317 | 5.885651e-52 | -8.615850e-47 |
| Msa0193540 | Msa1038210 | -0.824914 | 6.234221e-54 | -8.615850e-47 |
| Msa0208810 | Msa1038210 | -0.803827 | 2.894817e-49 | -8.615850e-47 |
| Msa0212750 | Msa1038210 | 0.868154 | 8.062909e-66 | -8.615850e-47 |
| Msa0227310 | Msa1038210 | 0.816558 | 5.198648e-52 | -8.615850e-47 |
| Msa0229940 | Msa1038210 | -0.809277 | 2.049137e-50 | -8.615850e-47 |
| Msa0388030 | Msa1038210 | 0.804017 | 2.643009e-49 | -8.615850e-47 |
| Msa0423270 | Msa1038210 | -0.803812 | 2.915817e-49 | -8.615850e-47 |
| Msa0437510 | Msa1038210 | -0.808466 | 3.054583e-50 | -8.615850e-47 |
| Msa0439890 | Msa1038210 | -0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa1038210 | Msa1069660 | 0.803011 | 4.273041e-49 | -8.615850e-47 |
| Msa1038210 | Msa1071660 | -0.822450 | 2.353200e-53 | -8.615850e-47 |
| Msa1038210 | Msa1073830 | -0.805661 | 1.198701e-49 | -8.615850e-47 |
| Msa1038210 | Msa1113590 | -0.801342 | 9.420526e-49 | -8.615850e-47 |
| Msa1038210 | Msa1114040 | -0.816156 | 6.394345e-52 | -8.615850e-47 |
| Msa1038210 | Msa1158770 | -0.817757 | 2.794804e-52 | -8.615850e-47 |
| Msa1038210 | Msa1198880 | -0.805600 | 1.234464e-49 | -8.615850e-47 |
| Msa1038210 | Msa1236070 | 0.849733 | 2.675433e-60 | -8.615850e-47 |
| Msa1038210 | Msa1246530 | 0.812490 | 4.130999e-51 | -8.615850e-47 |
| Msa1038210 | Msa1340040 | 0.846552 | 2.022411e-59 | -8.615850e-47 |
| Msa1038210 | Msa1363700 | -0.817471 | 3.242161e-52 | -8.615850e-47 |
| Msa1038210 | Msa1417810 | 0.844496 | 7.292741e-59 | -8.615850e-47 |
| Msa1038210 | Msa1417830 | 0.804448 | 2.149924e-49 | -8.615850e-47 |
| Msa1038210 | Msa1422840 | -0.824865 | 6.403590e-54 | -8.615850e-47 |
| Msa1038210 | Msa1433220 | -0.801899 | 7.242866e-49 | -8.615850e-47 |
| Msa1038210 | Msa1442220 | 0.822690 | 2.069990e-53 | -8.615850e-47 |
| Msa1038210 | Msa1445400 | 0.844811 | 5.999130e-59 | -8.615850e-47 |
| Msa1038210 | Msa1445420 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
| Msa1038210 | Msa1449350 | 0.847151 | 1.386318e-59 | -8.615850e-47 |
| Msa1038210 | Msa1449910 | -0.813353 | 2.671708e-51 | -8.615850e-47 |
| Msa0274630 | Msa1038210 | -0.816879 | 4.404893e-52 | -8.615850e-47 |
| Msa0275400 | Msa1038210 | 0.811935 | 5.457217e-51 | -8.615850e-47 |
| Msa0295000 | Msa1038210 | 0.823857 | 1.104852e-53 | -8.615850e-47 |
| Msa0557950 | Msa1038210 | 0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0576890 | Msa1038210 | -0.825346 | 4.927583e-54 | -8.615850e-47 |
| Msa0577200 | Msa1038210 | 0.815325 | 9.797463e-52 | -8.615850e-47 |
| Msa0578090 | Msa1038210 | -0.811009 | 8.674701e-51 | -8.615850e-47 |
| Msa0586850 | Msa1038210 | -0.834422 | 3.025359e-56 | -8.615850e-47 |
| Msa0855160 | Msa1038210 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa0876860 | Msa1038210 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
| Msa0930820 | Msa1038210 | -0.806959 | 6.383992e-50 | -8.615850e-47 |
| Msa0945100 | Msa1038210 | -0.820346 | 7.199454e-53 | -8.615850e-47 |
| Msa0947530 | Msa1038210 | 0.826089 | 3.284337e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038210 | MtrunA17_Chr7g0274301 | 87.739 | 522 | 38 | 3 | 1 | 508 | 1 | 510 | 0.0 | 882 |
| Msa1038210 | MtrunA17_Chr1g0184511 | 57.019 | 463 | 168 | 13 | 65 | 507 | 116 | 567 | 1.01e-144 | 427 |
| Msa1038210 | MtrunA17_Chr4g0071791 | 41.918 | 365 | 180 | 8 | 101 | 454 | 32 | 375 | 3.20e-85 | 270 |
| Msa1038210 | MtrunA17_Chr2g0298721 | 38.835 | 412 | 211 | 10 | 78 | 466 | 22 | 415 | 6.55e-82 | 262 |
| Msa1038210 | MtrunA17_Chr2g0285771 | 25.641 | 351 | 220 | 8 | 112 | 454 | 312 | 629 | 6.03e-25 | 108 |
| Msa1038210 | MtrunA17_Chr2g0285771 | 23.677 | 359 | 207 | 8 | 115 | 441 | 44 | 367 | 8.59e-16 | 80.5 |
| Msa1038210 | MtrunA17_Chr6g0453421 | 36.842 | 171 | 98 | 4 | 112 | 272 | 46 | 216 | 8.39e-25 | 107 |
| Msa1038210 | MtrunA17_Chr4g0002241 | 26.804 | 388 | 224 | 14 | 112 | 454 | 226 | 598 | 4.14e-23 | 102 |
| Msa1038210 | MtrunA17_Chr7g0217681 | 34.270 | 178 | 100 | 4 | 112 | 272 | 48 | 225 | 2.53e-22 | 100 |
| Msa1038210 | MtrunA17_Chr7g0249721 | 32.544 | 169 | 106 | 2 | 114 | 274 | 101 | 269 | 7.80e-22 | 96.3 |
| Msa1038210 | MtrunA17_Chr3g0140741 | 25.000 | 356 | 239 | 9 | 114 | 454 | 313 | 655 | 3.11e-19 | 91.3 |
| Msa1038210 | MtrunA17_Chr8g0376551 | 24.646 | 353 | 217 | 8 | 114 | 441 | 41 | 369 | 7.76e-19 | 89.7 |
| Msa1038210 | MtrunA17_Chr4g0049801 | 36.686 | 169 | 99 | 5 | 111 | 273 | 18 | 184 | 1.58e-18 | 89.0 |
| Msa1038210 | MtrunA17_Chr4g0049801 | 23.529 | 374 | 238 | 12 | 112 | 459 | 265 | 616 | 6.37e-17 | 84.0 |
| Msa1038210 | MtrunA17_Chr5g0412061 | 28.191 | 188 | 119 | 5 | 98 | 273 | 21 | 204 | 4.00e-15 | 78.2 |
| Msa1038210 | MtrunA17_Chr5g0412061 | 25.138 | 362 | 213 | 11 | 114 | 459 | 276 | 595 | 1.59e-13 | 73.2 |
| Msa1038210 | MtrunA17_Chr2g0279641 | 26.852 | 216 | 132 | 5 | 102 | 299 | 37 | 244 | 8.53e-15 | 77.4 |
| Msa1038210 | MtrunA17_Chr2g0279641 | 24.118 | 170 | 124 | 1 | 112 | 276 | 330 | 499 | 3.84e-12 | 68.9 |
| Msa1038210 | MtrunA17_Chr4g0065411 | 56.944 | 72 | 13 | 3 | 161 | 232 | 1 | 54 | 2.75e-12 | 62.0 |
| Msa1038210 | MtrunA17_Chr3g0127051 | 27.841 | 176 | 111 | 4 | 115 | 274 | 65 | 240 | 7.54e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1038210 | AT3G04610.3 | 66.890 | 447 | 119 | 11 | 78 | 507 | 119 | 553 | 0.0 | 538 |
| Msa1038210 | AT3G04610.4 | 66.890 | 447 | 119 | 11 | 78 | 507 | 119 | 553 | 0.0 | 538 |
| Msa1038210 | AT3G04610.2 | 66.890 | 447 | 119 | 12 | 78 | 507 | 143 | 577 | 0.0 | 537 |
| Msa1038210 | AT3G04610.1 | 66.890 | 447 | 119 | 12 | 78 | 507 | 143 | 577 | 0.0 | 537 |
| Msa1038210 | AT4G26000.1 | 41.885 | 382 | 194 | 8 | 103 | 474 | 64 | 427 | 2.89e-89 | 282 |
| Msa1038210 | AT1G51580.1 | 26.648 | 364 | 224 | 10 | 112 | 454 | 275 | 616 | 4.86e-25 | 109 |
| Msa1038210 | AT5G15270.3 | 25.740 | 338 | 187 | 8 | 112 | 437 | 49 | 334 | 1.33e-24 | 107 |
| Msa1038210 | AT5G15270.3 | 26.230 | 183 | 131 | 3 | 98 | 279 | 270 | 449 | 6.78e-18 | 87.0 |
| Msa1038210 | AT5G15270.2 | 25.740 | 338 | 187 | 8 | 112 | 437 | 49 | 334 | 1.52e-24 | 107 |
| Msa1038210 | AT5G15270.2 | 26.230 | 183 | 131 | 3 | 98 | 279 | 270 | 449 | 6.47e-18 | 87.0 |
| Msa1038210 | AT5G15270.1 | 25.740 | 338 | 187 | 8 | 112 | 437 | 49 | 334 | 1.52e-24 | 107 |
| Msa1038210 | AT5G15270.1 | 26.230 | 183 | 131 | 3 | 98 | 279 | 270 | 449 | 6.47e-18 | 87.0 |
| Msa1038210 | AT1G14170.1 | 31.461 | 178 | 104 | 4 | 112 | 272 | 18 | 194 | 1.04e-18 | 89.0 |
| Msa1038210 | AT1G14170.1 | 30.818 | 159 | 104 | 3 | 117 | 273 | 248 | 402 | 2.32e-11 | 66.2 |
| Msa1038210 | AT1G14170.2 | 31.461 | 178 | 104 | 4 | 112 | 272 | 10 | 186 | 1.08e-18 | 89.0 |
| Msa1038210 | AT1G14170.2 | 30.818 | 159 | 104 | 3 | 117 | 273 | 240 | 394 | 2.46e-11 | 66.2 |
| Msa1038210 | AT1G14170.3 | 31.461 | 178 | 104 | 4 | 112 | 272 | 43 | 219 | 1.34e-18 | 89.0 |
| Msa1038210 | AT1G14170.3 | 30.818 | 159 | 104 | 3 | 117 | 273 | 273 | 427 | 2.52e-11 | 66.2 |
| Msa1038210 | AT4G18375.3 | 26.124 | 356 | 211 | 13 | 114 | 442 | 37 | 367 | 2.54e-17 | 85.1 |
| Msa1038210 | AT4G18375.2 | 26.124 | 356 | 211 | 13 | 114 | 442 | 37 | 367 | 2.96e-17 | 85.1 |
| Msa1038210 | AT5G64390.1 | 29.412 | 204 | 119 | 5 | 111 | 298 | 45 | 239 | 1.80e-16 | 83.2 |
| Msa1038210 | AT5G64390.1 | 25.434 | 173 | 122 | 2 | 114 | 281 | 453 | 623 | 4.66e-12 | 69.3 |
| Msa1038210 | AT5G64390.3 | 29.412 | 204 | 119 | 5 | 111 | 298 | 45 | 239 | 1.93e-16 | 83.2 |
| Msa1038210 | AT5G64390.3 | 25.434 | 173 | 122 | 2 | 114 | 281 | 453 | 623 | 5.02e-12 | 68.9 |
| Msa1038210 | AT5G64390.2 | 29.412 | 204 | 119 | 5 | 111 | 298 | 45 | 239 | 2.05e-16 | 82.8 |
| Msa1038210 | AT5G64390.2 | 25.434 | 173 | 122 | 2 | 114 | 281 | 453 | 623 | 5.17e-12 | 68.9 |
| Msa1038210 | AT5G53060.1 | 22.254 | 346 | 247 | 5 | 109 | 454 | 321 | 644 | 8.00e-15 | 77.8 |
| Msa1038210 | AT5G53060.1 | 26.531 | 196 | 120 | 5 | 102 | 274 | 57 | 251 | 2.29e-12 | 70.1 |
| Msa1038210 | AT5G46190.2 | 26.513 | 347 | 186 | 14 | 114 | 426 | 45 | 356 | 3.45e-13 | 72.8 |
| Msa1038210 | AT5G46190.1 | 26.513 | 347 | 186 | 14 | 114 | 426 | 45 | 356 | 7.63e-13 | 71.6 |
| Msa1038210 | AT5G46190.4 | 26.513 | 347 | 186 | 14 | 114 | 426 | 45 | 356 | 7.63e-13 | 71.6 |
| Msa1038210 | AT5G46190.3 | 26.513 | 347 | 186 | 14 | 114 | 426 | 45 | 356 | 7.63e-13 | 71.6 |
| Msa1038210 | AT5G53060.3 | 26.531 | 196 | 120 | 5 | 102 | 274 | 57 | 251 | 1.60e-12 | 70.5 |
Find 196 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATACAATTTGATGCTTCT+TGG | 0.178221 | 7_1:+75037834 | None:intergenic |
| TCACAAGCAGGAAGTTTAAT+TGG | 0.191863 | 7_1:-75037884 | Msa1038210:CDS |
| AGAGATGTAAATTAGAAGTT+TGG | 0.227622 | 7_1:+75040834 | None:intergenic |
| ACATCTCTACCCTGCAATTA+AGG | 0.237835 | 7_1:-75040819 | Msa1038210:intron |
| TCGTACGCTGATGCTGTTAT+TGG | 0.256618 | 7_1:-75035237 | Msa1038210:CDS |
| CAAAAGGTTGGCGGGATAAT+TGG | 0.265143 | 7_1:-75040420 | Msa1038210:CDS |
| GGAGCCTATGGTGCAGTTTA+TGG | 0.267209 | 7_1:-75034136 | Msa1038210:CDS |
| GCAGTTTATGGTGCAAATTA+TGG | 0.271012 | 7_1:-75034124 | Msa1038210:CDS |
| TGGTGGGGTGGTGGTGGCAC+TGG | 0.284770 | 7_1:+75035889 | None:intergenic |
| CACAGCCCGTTCTAAAGTTC+CGG | 0.316758 | 7_1:+75040326 | None:intergenic |
| GATATAGCTTATATTTGTTC+CGG | 0.327385 | 7_1:+75035209 | None:intergenic |
| GCTGGTGGAGGTCCTGGATT+TGG | 0.327478 | 7_1:-75035832 | Msa1038210:CDS |
| ACGAAGTGATGAAGGATAAT+AGG | 0.336901 | 7_1:+75040953 | None:intergenic |
| GAAGATGGAATCTAGGGTTT+TGG | 0.338192 | 7_1:+75040870 | None:intergenic |
| CAGTTTATGGTGCAAATTAT+GGG | 0.346952 | 7_1:-75034123 | Msa1038210:CDS |
| AACTCCTCTTGTTTCTTGTA+TGG | 0.349928 | 7_1:+75035161 | None:intergenic |
| TGTTTCTGTTGGCAGTCATT+TGG | 0.351005 | 7_1:-75033945 | Msa1038210:three_prime_UTR |
| CCCCATGATTGGTGGGGTGG+TGG | 0.363121 | 7_1:+75035880 | None:intergenic |
| GATGCTCCTTCAGGTGTGGC+TGG | 0.367185 | 7_1:-75037938 | Msa1038210:CDS |
| GGCACTGGCATGTGCTCCAC+AGG | 0.369095 | 7_1:+75035904 | None:intergenic |
| GAATGAAGAAGATGGAATCT+AGG | 0.369203 | 7_1:+75040863 | None:intergenic |
| CAGCCCGGCCATTTCTTCTC+AGG | 0.371179 | 7_1:+75040480 | None:intergenic |
| CCAAATGCTGGTGGAGGTCC+TGG | 0.372713 | 7_1:-75035838 | Msa1038210:CDS |
| CCAATCATGGGGTCCACCTC+AGG | 0.379209 | 7_1:-75035869 | Msa1038210:CDS |
| ATGTTTCCAACATTCAATAA+TGG | 0.379356 | 7_1:+75034069 | None:intergenic |
| GAGTAAATTACCTTAATTGC+AGG | 0.382099 | 7_1:+75040809 | None:intergenic |
| CATGATTGGTGGGGTGGTGG+TGG | 0.386854 | 7_1:+75035883 | None:intergenic |
| GAGATGTAAATTAGAAGTTT+GGG | 0.387707 | 7_1:+75040835 | None:intergenic |
| GCTCGTGTTAAGATTCTTGA+TGG | 0.388997 | 7_1:-75040354 | Msa1038210:CDS |
| GATGGGTTAGATGCTCCTTC+AGG | 0.390825 | 7_1:-75037947 | Msa1038210:CDS |
| GACAGGGTGGTTGAAGTAGT+AGG | 0.398062 | 7_1:-75036128 | Msa1038210:CDS |
| GCTCATAAACGGTTAATTGA+TGG | 0.400721 | 7_1:-75037965 | Msa1038210:CDS |
| CACTGCCTTGTGCACTCCAA+TGG | 0.404296 | 7_1:+75036100 | None:intergenic |
| AAACTTCCTGCTTGTGAGGC+TGG | 0.410456 | 7_1:+75037890 | None:intergenic |
| CACCACCACCCCACCAATCA+TGG | 0.417160 | 7_1:-75035882 | Msa1038210:CDS |
| CTGAGAAGAAATGGCCGGGC+TGG | 0.417620 | 7_1:-75040479 | Msa1038210:CDS |
| CCACCTGTTTGTTGCTGCGC+CGG | 0.419210 | 7_1:+75034241 | None:intergenic |
| GCACCGGCGCAGCAACAAAC+AGG | 0.420300 | 7_1:-75034244 | Msa1038210:CDS |
| GAATTGTATCCTTGGTCTGC+AGG | 0.425427 | 7_1:+75034214 | None:intergenic |
| CCAGGACCTCCACCAGCATT+TGG | 0.425866 | 7_1:+75035838 | None:intergenic |
| TCTCTTCCACCTGCTGTGGA+TGG | 0.429032 | 7_1:-75037998 | Msa1038210:CDS |
| AATGTTGGTTCCTGCTCAAA+AGG | 0.429285 | 7_1:-75040436 | Msa1038210:CDS |
| TGCTGTGGATGGCTTATTGA+AGG | 0.431392 | 7_1:-75037987 | Msa1038210:CDS |
| TGAGAGTGGAGGGAGTGACT+TGG | 0.432730 | 7_1:+75040919 | None:intergenic |
| ACAGCCCGTTCTAAAGTTCC+GGG | 0.435322 | 7_1:+75040327 | None:intergenic |
| TCCTTCAGGTGTGGCTGGGA+AGG | 0.436543 | 7_1:-75037933 | Msa1038210:CDS |
| TAATTATCAACTTGCCTTGG+AGG | 0.437730 | 7_1:+75035787 | None:intergenic |
| TAGTTCTACTGCCTCATCAT+TGG | 0.438346 | 7_1:+75034098 | None:intergenic |
| CACAAGCAGGAAGTTTAATT+GGG | 0.440852 | 7_1:-75037883 | Msa1038210:CDS |
| AGCTGAAATGCCTCCTCCAT+TGG | 0.441524 | 7_1:-75035755 | Msa1038210:CDS |
| AAGAAATGGCCGGGCTGGCC+TGG | 0.444619 | 7_1:-75040474 | Msa1038210:CDS |
| AAATTGTATAGTCAGAGTTC+TGG | 0.448147 | 7_1:-75037822 | Msa1038210:CDS |
| CAAGAAACAAGAGGAGTTCC+TGG | 0.449581 | 7_1:-75035156 | Msa1038210:CDS |
| CAACCACCCTGTCATCTTGA+AGG | 0.450885 | 7_1:+75036138 | None:intergenic |
| AAGCTTCCATTATTGAATGT+TGG | 0.451784 | 7_1:-75034075 | Msa1038210:three_prime_UTR |
| GAGGTGGACCCCATGATTGG+TGG | 0.454647 | 7_1:+75035872 | None:intergenic |
| CCAGGACATGCTGGAGCCTA+TGG | 0.454711 | 7_1:-75034148 | Msa1038210:CDS |
| CTATTCGACATTGCGCTACA+TGG | 0.462365 | 7_1:-75034020 | Msa1038210:three_prime_UTR |
| ACAGGGTGGTTGAAGTAGTA+GGG | 0.462789 | 7_1:-75036127 | Msa1038210:CDS |
| ACTGCCTTGTGCACTCCAAT+GGG | 0.463713 | 7_1:+75036101 | None:intergenic |
| AGGTGGACCCCATGATTGGT+GGG | 0.466069 | 7_1:+75035873 | None:intergenic |
| AAGATTCTTGATGGGCCTCC+CGG | 0.466560 | 7_1:-75040345 | Msa1038210:CDS |
| AATTGTATAGTCAGAGTTCT+GGG | 0.468142 | 7_1:-75037821 | Msa1038210:CDS |
| TCGTTGAGCCTGAGAAGAAA+TGG | 0.468519 | 7_1:-75040488 | Msa1038210:CDS |
| GATCTTTCTCCAGATGCAAA+TGG | 0.469181 | 7_1:-75035938 | Msa1038210:intron |
| CCATAGGCTCCAGCATGTCC+TGG | 0.470428 | 7_1:+75034148 | None:intergenic |
| ATGCTAGTTAACTAACTACT+AGG | 0.472817 | 7_1:-75033817 | Msa1038210:three_prime_UTR |
| AGGGGCTAAGTGAGAGTGGA+GGG | 0.474281 | 7_1:+75040909 | None:intergenic |
| GGACCCCATGATTGGTGGGG+TGG | 0.475178 | 7_1:+75035877 | None:intergenic |
| TATGGAAGAGATGCTTCAAT+AGG | 0.476740 | 7_1:-75035703 | Msa1038210:CDS |
| GCTTATTGAAGGCTCATAAA+CGG | 0.481382 | 7_1:-75037976 | Msa1038210:CDS |
| GCCTCCCGGAACTTTAGAAC+GGG | 0.485330 | 7_1:-75040331 | Msa1038210:CDS |
| CTCATAAACGGTTAATTGAT+GGG | 0.485762 | 7_1:-75037964 | Msa1038210:CDS |
| TTCAATAAGCCATCCACAGC+AGG | 0.487643 | 7_1:+75037989 | None:intergenic |
| ACAGCATCAGCGTACGATAG+AGG | 0.489668 | 7_1:+75035243 | None:intergenic |
| GGCTCCAGCATGTCCTGGAT+TGG | 0.489729 | 7_1:+75034153 | None:intergenic |
| TTCTTCTCTTCCACCTGCTG+TGG | 0.494945 | 7_1:-75038002 | Msa1038210:CDS |
| TTCTTCTCAGGCTCAACGAT+CGG | 0.495988 | 7_1:+75040492 | None:intergenic |
| CATTGGAGTGCACAAGGCAG+TGG | 0.499275 | 7_1:-75036099 | Msa1038210:CDS |
| CAGGGTAGGAATTGTATCCT+TGG | 0.499993 | 7_1:+75034206 | None:intergenic |
| GAAAAGGGGCTAAGTGAGAG+TGG | 0.501137 | 7_1:+75040905 | None:intergenic |
| AACAGCACAGCAATTGATAC+AGG | 0.502245 | 7_1:-75035091 | Msa1038210:intron |
| ACCACCACCCCACCAATCAT+GGG | 0.502652 | 7_1:-75035881 | Msa1038210:CDS |
| CTTGGAGGTGGCATGAATTG+AGG | 0.503745 | 7_1:+75035802 | None:intergenic |
| CCTGAGGTGGACCCCATGAT+TGG | 0.504891 | 7_1:+75035869 | None:intergenic |
| CATGCGATTTATGAAAAGCT+AGG | 0.505999 | 7_1:+75033837 | None:intergenic |
| GTATCAGCTAAAGATGAGTC+TGG | 0.506573 | 7_1:-75038025 | Msa1038210:CDS |
| TTGTGAGAACGAAGTGATGA+AGG | 0.506916 | 7_1:+75040945 | None:intergenic |
| GCGTCACCACCTTCCAATCC+AGG | 0.508103 | 7_1:-75034166 | Msa1038210:CDS |
| CATCATGGTATATCCGCCTA+TGG | 0.508306 | 7_1:-75035721 | Msa1038210:CDS |
| ATGCTCCTTCAGGTGTGGCT+GGG | 0.509317 | 7_1:-75037937 | Msa1038210:CDS |
| CAGGGTCTCCCACCAAATGC+TGG | 0.510314 | 7_1:-75035850 | Msa1038210:CDS |
| GTTCCTGCTCAAAAGGTTGG+CGG | 0.511177 | 7_1:-75040429 | Msa1038210:CDS |
| CTCCCACCAAATGCTGGTGG+AGG | 0.511292 | 7_1:-75035844 | Msa1038210:CDS |
| CAAGTTAATAATACATTACA+AGG | 0.515691 | 7_1:+75033898 | None:intergenic |
| CACCAGTGTTCTGTTTCTGT+TGG | 0.515972 | 7_1:-75033956 | Msa1038210:three_prime_UTR |
| TGCTAGTTAACTAACTACTA+GGG | 0.516781 | 7_1:-75033816 | Msa1038210:three_prime_UTR |
| TATGGCGGAAGCTGCAGCAC+CGG | 0.517885 | 7_1:-75034260 | Msa1038210:CDS |
| TACTCAGTCTGCACCTTCCA+TGG | 0.518367 | 7_1:-75035662 | Msa1038210:CDS |
| CTGTTGGCAGTCATTTGGAA+AGG | 0.520167 | 7_1:-75033940 | Msa1038210:three_prime_UTR |
| ACACTCTCACCAGGCCAGCC+CGG | 0.521278 | 7_1:+75040465 | None:intergenic |
| TTATCAACTTGCCTTGGAGG+TGG | 0.522949 | 7_1:+75035790 | None:intergenic |
| AATTAAACTTCCTGCTTGTG+AGG | 0.525068 | 7_1:+75037886 | None:intergenic |
| CCAGCATGTCCTGGATTGGA+AGG | 0.525197 | 7_1:+75034157 | None:intergenic |
| AATGAAGAAGATGGAATCTA+GGG | 0.525306 | 7_1:+75040864 | None:intergenic |
| TAGTAATTATCAACTTGCCT+TGG | 0.526071 | 7_1:+75035784 | None:intergenic |
| GGGTGCGAGAATGAAGAAGA+TGG | 0.528572 | 7_1:+75040855 | None:intergenic |
| GGAACAAAATGAGTCTGAAA+AGG | 0.528718 | 7_1:-75040526 | Msa1038210:CDS |
| ATTTCAACTGTCATCTCCCC+AGG | 0.529708 | 7_1:+75035138 | None:intergenic |
| AAATTGAGCTACAAGCTCAT+TGG | 0.529728 | 7_1:+75033787 | None:intergenic |
| TTGGTTCCTGCTCAAAAGGT+TGG | 0.532678 | 7_1:-75040432 | Msa1038210:CDS |
| AGATGACAGTTGAAATCAGC+GGG | 0.541840 | 7_1:-75035131 | Msa1038210:CDS |
| CATAGGCGGATATACCATGA+TGG | 0.542292 | 7_1:+75035722 | None:intergenic |
| TTCTGGCAGTGGAAATTCCA+TGG | 0.543536 | 7_1:-75040604 | Msa1038210:intron |
| CCTTCCAATCCAGGACATGC+TGG | 0.543630 | 7_1:-75034157 | Msa1038210:CDS |
| TTCCTGCTCAAAAGGTTGGC+GGG | 0.551840 | 7_1:-75040428 | Msa1038210:CDS |
| CCGGCGCAGCAACAAACAGG+TGG | 0.553534 | 7_1:-75034241 | Msa1038210:CDS |
| AATGGAGGAGGCATTTCAGC+TGG | 0.554857 | 7_1:+75035757 | None:intergenic |
| GGCTGTTTGTCCAATGGAGG+AGG | 0.557347 | 7_1:+75035745 | None:intergenic |
| ATAGTCAGAGTTCTGGGAGC+AGG | 0.562698 | 7_1:-75037815 | Msa1038210:intron |
| GCATAGACAGAACTATGAGC+AGG | 0.562952 | 7_1:+75034187 | None:intergenic |
| ACCTTCCCAGCCACACCTGA+AGG | 0.563518 | 7_1:+75037932 | None:intergenic |
| CTCAATTCATGCCACCTCCA+AGG | 0.565069 | 7_1:-75035801 | Msa1038210:CDS |
| TGTTTCTTGTATGGTAACAG+TGG | 0.565082 | 7_1:+75035170 | None:intergenic |
| GAGCCTGAGAAGAAATGGCC+GGG | 0.566112 | 7_1:-75040483 | Msa1038210:CDS |
| TGAGCCTGAGAAGAAATGGC+CGG | 0.566245 | 7_1:-75040484 | Msa1038210:CDS |
| GAAAAGTACCTGTGTGACCA+TGG | 0.567170 | 7_1:+75035645 | None:intergenic |
| GGACCTCCACCAGCATTTGG+TGG | 0.567350 | 7_1:+75035841 | None:intergenic |
| TGAGGAGCAAGTCCAAATCC+AGG | 0.567540 | 7_1:+75035820 | None:intergenic |
| TGATGAAGGATAATAGGTGG+TGG | 0.568994 | 7_1:+75040959 | None:intergenic |
| AAGGGGCTAAGTGAGAGTGG+AGG | 0.571507 | 7_1:+75040908 | None:intergenic |
| ATAGGCGGATATACCATGAT+GGG | 0.572279 | 7_1:+75035723 | None:intergenic |
| GGAAGGTGCAGACTGAGTAT+TGG | 0.573422 | 7_1:+75035666 | None:intergenic |
| GCACTGGCATGTGCTCCACA+GGG | 0.573640 | 7_1:+75035905 | None:intergenic |
| TATTGAAGCATCTCTTCCAT+AGG | 0.574272 | 7_1:+75035705 | None:intergenic |
| CTCGTGTTAAGATTCTTGAT+GGG | 0.574443 | 7_1:-75040353 | Msa1038210:CDS |
| GGCCTCCCGGAACTTTAGAA+CGG | 0.574569 | 7_1:-75040332 | Msa1038210:CDS |
| AAGAAACAAGAGGAGTTCCT+GGG | 0.578584 | 7_1:-75035155 | Msa1038210:CDS |
| GGAGGAGGCATTTCAGCTGG+TGG | 0.580842 | 7_1:+75035760 | None:intergenic |
| CTAGTGCCAGCCTCACAAGC+AGG | 0.582418 | 7_1:-75037896 | Msa1038210:CDS |
| AATAGGTGGTGGCATAACAT+TGG | 0.584612 | 7_1:+75040970 | None:intergenic |
| GGATCCCATTGGAGTGCACA+AGG | 0.586468 | 7_1:-75036105 | Msa1038210:CDS |
| TTGGACAAACAGCCCCATCA+TGG | 0.587088 | 7_1:-75035736 | Msa1038210:CDS |
| GATGCTGTTATTGGAACAGC+CGG | 0.587215 | 7_1:-75035228 | Msa1038210:CDS |
| AACCACCCTGTCATCTTGAA+GGG | 0.588607 | 7_1:+75036139 | None:intergenic |
| AGTAAATTACCTTAATTGCA+GGG | 0.591110 | 7_1:+75040810 | None:intergenic |
| TGCACCATAAACTGCACCAT+AGG | 0.591283 | 7_1:+75034132 | None:intergenic |
| GTTCTGATCAACCTCAGCCA+TGG | 0.592521 | 7_1:+75040587 | None:intergenic |
| GGCGGGATAATTGGTCGGAA+AGG | 0.596615 | 7_1:-75040411 | Msa1038210:CDS |
| TTGTATCCTTGGTCTGCAGG+AGG | 0.600150 | 7_1:+75034217 | None:intergenic |
| GGTGGACCCCATGATTGGTG+GGG | 0.600476 | 7_1:+75035874 | None:intergenic |
| AGCTATATCAGAAGAGCAAG+TGG | 0.600575 | 7_1:-75035195 | Msa1038210:CDS |
| TGATGGGGCTGTTTGTCCAA+TGG | 0.602005 | 7_1:+75035739 | None:intergenic |
| GACCTCCACCAGCATTTGGT+GGG | 0.602365 | 7_1:+75035842 | None:intergenic |
| GACAGAACTATGAGCAGGGT+AGG | 0.604594 | 7_1:+75034192 | None:intergenic |
| CAGTGGAAATTCCATGGCTG+AGG | 0.606695 | 7_1:-75040598 | Msa1038210:CDS |
| CAATCATGGGGTCCACCTCA+GGG | 0.610026 | 7_1:-75035868 | Msa1038210:CDS |
| GCTATATCAGAAGAGCAAGT+GGG | 0.610415 | 7_1:-75035194 | Msa1038210:CDS |
| ACAACAGCAAATTGTTGAGA+CGG | 0.611449 | 7_1:-75040547 | Msa1038210:CDS |
| AATAAGCCATCCACAGCAGG+TGG | 0.611934 | 7_1:+75037992 | None:intergenic |
| ACAAAATGAGTCTGAAAAGG+TGG | 0.617900 | 7_1:-75040523 | Msa1038210:CDS |
| GGTCTCCCACCAAATGCTGG+TGG | 0.624009 | 7_1:-75035847 | Msa1038210:CDS |
| TGCACCTTCCATGGTCACAC+AGG | 0.626823 | 7_1:-75035653 | Msa1038210:intron |
| CAGGGTGGTTGAAGTAGTAG+GGG | 0.627870 | 7_1:-75036126 | Msa1038210:CDS |
| TGAAGCATCTCTTCCATAGG+CGG | 0.628282 | 7_1:+75035708 | None:intergenic |
| ATTCTGAAAACACTCTCACC+AGG | 0.628905 | 7_1:+75040456 | None:intergenic |
| TGCCCTTCAAGATGACAGGG+TGG | 0.630655 | 7_1:-75036141 | Msa1038210:CDS |
| GAAGTAGTAGGGGATCCCAT+TGG | 0.631279 | 7_1:-75036116 | Msa1038210:CDS |
| AGTACCTGTGTGACCATGGA+AGG | 0.631574 | 7_1:+75035649 | None:intergenic |
| AGTTTAATTGGGAAACAAGG+AGG | 0.632206 | 7_1:-75037872 | Msa1038210:CDS |
| GTTACCATACAAGAAACAAG+AGG | 0.636417 | 7_1:-75035165 | Msa1038210:CDS |
| CTGGCATGTGCTCCACAGGG+TGG | 0.637657 | 7_1:+75035908 | None:intergenic |
| GGAAGTTTAATTGGGAAACA+AGG | 0.639460 | 7_1:-75037875 | Msa1038210:CDS |
| AAGTGATGAAGGATAATAGG+TGG | 0.639762 | 7_1:+75040956 | None:intergenic |
| CTATATCAGAAGAGCAAGTG+GGG | 0.641360 | 7_1:-75035193 | Msa1038210:CDS |
| GTTAGATGCTCCTTCAGGTG+TGG | 0.645046 | 7_1:-75037942 | Msa1038210:CDS |
| GAGGAGGCATTTCAGCTGGT+GGG | 0.647020 | 7_1:+75035761 | None:intergenic |
| CGGCGCAGCAACAAACAGGT+GGG | 0.647966 | 7_1:-75034240 | Msa1038210:CDS |
| CCACCACCCCACCAATCATG+GGG | 0.649451 | 7_1:-75035880 | Msa1038210:CDS |
| AGGTTGGCGGGATAATTGGT+CGG | 0.651542 | 7_1:-75040416 | Msa1038210:CDS |
| AATTATGGGTACCAATGATG+AGG | 0.652066 | 7_1:-75034109 | Msa1038210:exon |
| TTTGGTGGGAGACCCTGAGG+TGG | 0.656048 | 7_1:+75035856 | None:intergenic |
| GCTAGTTAACTAACTACTAG+GGG | 0.657408 | 7_1:-75033815 | Msa1038210:three_prime_UTR |
| GGTGGGCCTCCTGCAGACCA+AGG | 0.658048 | 7_1:-75034223 | Msa1038210:CDS |
| GCATTTGGTGGGAGACCCTG+AGG | 0.663331 | 7_1:+75035853 | None:intergenic |
| TGGGGCTGTTTGTCCAATGG+AGG | 0.664238 | 7_1:+75035742 | None:intergenic |
| CATAGACAGAACTATGAGCA+GGG | 0.665116 | 7_1:+75034188 | None:intergenic |
| TGCCAACAGAAACAGAACAC+TGG | 0.675506 | 7_1:+75033954 | None:intergenic |
| GCATGTCCTGGATTGGAAGG+TGG | 0.687180 | 7_1:+75034160 | None:intergenic |
| TAGGCGGATATACCATGATG+GGG | 0.688165 | 7_1:+75035724 | None:intergenic |
| GCTGAGGTTGATCAGAACGT+AGG | 0.692033 | 7_1:-75040582 | Msa1038210:CDS |
| TGAGTCTGAAAAGGTGGTTG+AGG | 0.692336 | 7_1:-75040517 | Msa1038210:CDS |
| GCCCGTTCTAAAGTTCCGGG+AGG | 0.705854 | 7_1:+75040330 | None:intergenic |
| AGAAACAAGAGGAGTTCCTG+GGG | 0.720239 | 7_1:-75035154 | Msa1038210:CDS |
| AATGGCTAATAACCACCCTG+TGG | 0.739150 | 7_1:-75035920 | Msa1038210:CDS |
| GAGATGACAGTTGAAATCAG+CGG | 0.760601 | 7_1:-75035132 | Msa1038210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTTAATTTTAACACA+TGG | - | chr7_1:75035649-75035668 | Msa1038210:intron | 10.0% |
| !!! | TCTATTTTTTTTTATTGATT+GGG | + | chr7_1:75035781-75035800 | None:intergenic | 10.0% |
| !!! | TTCTATTTTTTTTTATTGAT+TGG | + | chr7_1:75035782-75035801 | None:intergenic | 10.0% |
| !!! | AGAAATAATTTTTAATGAAA+AGG | + | chr7_1:75038440-75038459 | None:intergenic | 10.0% |
| !!! | ATTTTTTAAAAGGATTCATT+TGG | - | chr7_1:75034610-75034629 | Msa1038210:intron | 15.0% |
| !!! | GAATATAGTTTTAAAATTTG+TGG | - | chr7_1:75034637-75034656 | Msa1038210:intron | 15.0% |
| !! | AAATATTTACGTATGTAATT+AGG | - | chr7_1:75034869-75034888 | Msa1038210:intron | 15.0% |
| !!! | TAAAAAATATAGCTTGTTTA+TGG | - | chr7_1:75035142-75035161 | Msa1038210:CDS | 15.0% |
| !! | AGAAAAAGAAAAAAAAAACA+TGG | + | chr7_1:75036199-75036218 | None:intergenic | 15.0% |
| !! | TTATTAAAAATGCAACAAAT+AGG | + | chr7_1:75036543-75036562 | None:intergenic | 15.0% |
| !! | TTATCTCTGATATAAAATTA+GGG | + | chr7_1:75037118-75037137 | None:intergenic | 15.0% |
| !! | AGTATCAATAATAGTAAAAA+TGG | + | chr7_1:75037301-75037320 | None:intergenic | 15.0% |
| !!! | AAAAGCTGATTTATTATTTT+TGG | - | chr7_1:75037770-75037789 | Msa1038210:intron | 15.0% |
| !!! | ATTTTATAATGCTTCTTTTA+CGG | - | chr7_1:75037829-75037848 | Msa1038210:CDS | 15.0% |
| !!! | TACTTCCTTCATTTTTTAAA+AGG | - | chr7_1:75034600-75034619 | Msa1038210:intron | 20.0% |
| !!! | TGAATCCTTTTAAAAAATGA+AGG | + | chr7_1:75034608-75034627 | None:intergenic | 20.0% |
| !!! | TTCATGATATCTGTTTTTTA+TGG | - | chr7_1:75034678-75034697 | Msa1038210:intron | 20.0% |
| !! | TTGTTATAATGTACTTATCT+AGG | + | chr7_1:75034776-75034795 | None:intergenic | 20.0% |
| !! | AGGTATTTACCTATATAATT+TGG | - | chr7_1:75034889-75034908 | Msa1038210:intron | 20.0% |
| !! | GGTATTTACCTATATAATTT+GGG | - | chr7_1:75034890-75034909 | Msa1038210:intron | 20.0% |
| !! | TTATGATGAAGAATAAATTG+TGG | - | chr7_1:75035056-75035075 | Msa1038210:intron | 20.0% |
| !! | ACAAATTCGAAAAAGAATTA+TGG | - | chr7_1:75035231-75035250 | Msa1038210:CDS | 20.0% |
| !! | AGAATTAAATTCATATTTCG+TGG | + | chr7_1:75035264-75035283 | None:intergenic | 20.0% |
| !!! | GTTCAATATTCCATTTTTAA+AGG | - | chr7_1:75035306-75035325 | Msa1038210:intron | 20.0% |
| !!! | ATAAACTTTTTTTCATTGCT+AGG | + | chr7_1:75035520-75035539 | None:intergenic | 20.0% |
| !! | TATGACAAACAAAATACTTA+TGG | + | chr7_1:75035583-75035602 | None:intergenic | 20.0% |
| !! | ATACATGTTATCAAGAAAAA+AGG | - | chr7_1:75035600-75035619 | Msa1038210:intron | 20.0% |
| !!! | TTAAAATTAATTGATAGCCT+TGG | + | chr7_1:75035639-75035658 | None:intergenic | 20.0% |
| !! | ATATTAAATATACTGGCAAA+GGG | - | chr7_1:75035980-75035999 | Msa1038210:intron | 20.0% |
| !!! | TAATTTTCAAAGATTGCAAT+TGG | - | chr7_1:75036328-75036347 | Msa1038210:intron | 20.0% |
| !!! | AAATAGTAATGTAGAGTATT+TGG | - | chr7_1:75036364-75036383 | Msa1038210:intron | 20.0% |
| !!! | AATAGTAATGTAGAGTATTT+GGG | - | chr7_1:75036365-75036384 | Msa1038210:intron | 20.0% |
| !! | TATTAATTGTGGAAGAATAT+TGG | - | chr7_1:75036501-75036520 | Msa1038210:intron | 20.0% |
| !! | CTTATCTCTGATATAAAATT+AGG | + | chr7_1:75037119-75037138 | None:intergenic | 20.0% |
| !!! | TTTTATATCAGAGATAAGTT+TGG | - | chr7_1:75037121-75037140 | Msa1038210:intron | 20.0% |
| !! | TTTATATCAGAGATAAGTTT+GGG | - | chr7_1:75037122-75037141 | Msa1038210:intron | 20.0% |
| !!! | TTTTATAATGCTTCTTTTAC+GGG | - | chr7_1:75037830-75037849 | Msa1038210:CDS | 20.0% |
| !! | AGCATTAAAAAAAGTAAACT+TGG | + | chr7_1:75037882-75037901 | None:intergenic | 20.0% |
| !!! | CTTTTAACTTGTTGTTTTAA+GGG | + | chr7_1:75038244-75038263 | None:intergenic | 20.0% |
| !!! | TCTTTTAACTTGTTGTTTTA+AGG | + | chr7_1:75038245-75038264 | None:intergenic | 20.0% |
| !! | AAACAACAAGTTAAAAGAAA+CGG | - | chr7_1:75038247-75038266 | Msa1038210:intron | 20.0% |
| !! | ACAACTGAATTAATAAATAG+CGG | + | chr7_1:75038352-75038371 | None:intergenic | 20.0% |
| !!! | ACAAAAAAAGGTTTTAGAAA+GGG | + | chr7_1:75038413-75038432 | None:intergenic | 20.0% |
| !!! | GCTTTTAGATAAAATATTAG+TGG | - | chr7_1:75038504-75038523 | Msa1038210:intron | 20.0% |
| !! | AACTAAAAATTTCTTAAGGT+GGG | + | chr7_1:75038726-75038745 | None:intergenic | 20.0% |
| !! | GATCAACTAAAAATTTCTTA+AGG | + | chr7_1:75038730-75038749 | None:intergenic | 20.0% |
| !! | CTTACATTCATTTCAAAAAT+TGG | + | chr7_1:75038764-75038783 | None:intergenic | 20.0% |
| !! | TTATTAACCATTGTTATACT+TGG | - | chr7_1:75039910-75039929 | Msa1038210:intron | 20.0% |
| !!! | ACTGTTTTGTTTTTTAATAG+TGG | + | chr7_1:75039964-75039983 | None:intergenic | 20.0% |
| !! | AAAAATATTGAATCGTTTAC+TGG | - | chr7_1:75040102-75040121 | Msa1038210:intron | 20.0% |
| !! | AAAATATTGAATCGTTTACT+GGG | - | chr7_1:75040103-75040122 | Msa1038210:intron | 20.0% |
| !!! | TATTTTTTCAATAAGTTGAC+TGG | - | chr7_1:75040243-75040262 | Msa1038210:intron | 20.0% |
| !!! | GTAAATTCATAGCTTTTATA+TGG | + | chr7_1:75040391-75040410 | None:intergenic | 20.0% |
| !! | CAAGTTAATAATACATTACA+AGG | + | chr7_1:75040892-75040911 | None:intergenic | 20.0% |
| ! | GAGATGTAAATTAGAAGTTT+GGG | + | chr7_1:75033955-75033974 | None:intergenic | 25.0% |
| ! | AGAGATGTAAATTAGAAGTT+TGG | + | chr7_1:75033956-75033975 | None:intergenic | 25.0% |
| ! | AGTAAATTACCTTAATTGCA+GGG | + | chr7_1:75033980-75033999 | None:intergenic | 25.0% |
| ! | TAGAGTTAAAAAGAGAATAG+GGG | + | chr7_1:75034107-75034126 | None:intergenic | 25.0% |
| ! | GTAGAGTTAAAAAGAGAATA+GGG | + | chr7_1:75034108-75034127 | None:intergenic | 25.0% |
| ! | AGTAGAGTTAAAAAGAGAAT+AGG | + | chr7_1:75034109-75034128 | None:intergenic | 25.0% |
| !!! | TTTTTGTTTGTTTGTGTTTC+TGG | - | chr7_1:75034166-75034185 | Msa1038210:CDS | 25.0% |
| !!! | TTATTTTTACCAAGCTCTTT+TGG | - | chr7_1:75034570-75034589 | Msa1038210:intron | 25.0% |
| ! | TACGTAAATATTTCTCACAT+TGG | + | chr7_1:75034862-75034881 | None:intergenic | 25.0% |
| !! | ATTTTGGACCCAAATTATAT+AGG | + | chr7_1:75034901-75034920 | None:intergenic | 25.0% |
| !! | CTGAATATTTACAAGCATTT+TGG | + | chr7_1:75034917-75034936 | None:intergenic | 25.0% |
| ! | ATATTCAGAGTAGGAATTAT+TGG | - | chr7_1:75034929-75034948 | Msa1038210:intron | 25.0% |
| ! | TATTCAGAGTAGGAATTATT+GGG | - | chr7_1:75034930-75034949 | Msa1038210:intron | 25.0% |
| !! | AGTACCTTTAATTCTTTTCA+AGG | - | chr7_1:75034963-75034982 | Msa1038210:intron | 25.0% |
| ! | TTGCAAATTAAGATTGCTTA+AGG | + | chr7_1:75035090-75035109 | None:intergenic | 25.0% |
| ! | TTCATTGTATCACATGAATA+AGG | + | chr7_1:75035184-75035203 | None:intergenic | 25.0% |
| !!! | AACTTTGGTTCTTCAATATT+GGG | + | chr7_1:75035357-75035376 | None:intergenic | 25.0% |
| !!! | GGTTTGGTATTTATTGTTTT+CGG | + | chr7_1:75035562-75035581 | None:intergenic | 25.0% |
| ! | CAAACAAAATACTTATGGTT+TGG | + | chr7_1:75035578-75035597 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTGATTGGGTCT+TGG | + | chr7_1:75035775-75035794 | None:intergenic | 25.0% |
| !!! | AGATAAACCTTTTAGAAACA+TGG | + | chr7_1:75035882-75035901 | None:intergenic | 25.0% |
| !! | TGTTTCTAAAAGGTTTATCT+AGG | - | chr7_1:75035882-75035901 | Msa1038210:CDS | 25.0% |
| !! | CTTGGTGATATTAAATATAC+TGG | - | chr7_1:75035973-75035992 | Msa1038210:intron | 25.0% |
| ! | GATATTAAATATACTGGCAA+AGG | - | chr7_1:75035979-75035998 | Msa1038210:intron | 25.0% |
| ! | AGCTATTCCTCTTAATAATT+CGG | - | chr7_1:75036394-75036413 | Msa1038210:intron | 25.0% |
| !! | CAATTTTGTAACAGTCTTAA+AGG | + | chr7_1:75036420-75036439 | None:intergenic | 25.0% |
| !!! | CTTTAAGACTGTTACAAAAT+TGG | - | chr7_1:75036418-75036437 | Msa1038210:intron | 25.0% |
| ! | GATAATGTAGGTATTAATTG+TGG | - | chr7_1:75036490-75036509 | Msa1038210:intron | 25.0% |
| ! | GTTATTTGTTCTTTGTGATT+AGG | - | chr7_1:75036734-75036753 | Msa1038210:intron | 25.0% |
| ! | TCTGATATAAAATTAGGGTA+AGG | + | chr7_1:75037113-75037132 | None:intergenic | 25.0% |
| !!! | ATGCTTTTAAGTCTATTAAC+TGG | - | chr7_1:75037191-75037210 | Msa1038210:intron | 25.0% |
| !!! | TGCTTTTAAGTCTATTAACT+GGG | - | chr7_1:75037192-75037211 | Msa1038210:intron | 25.0% |
| ! | TAATGAGTTTGATCCATATA+TGG | - | chr7_1:75037368-75037387 | Msa1038210:intron | 25.0% |
| ! | TAAGAATAACAAGCAATTAG+CGG | + | chr7_1:75037804-75037823 | None:intergenic | 25.0% |
| ! | CAACTGAATTAATAAATAGC+GGG | + | chr7_1:75038351-75038370 | None:intergenic | 25.0% |
| !!! | GACAAAAAAAGGTTTTAGAA+AGG | + | chr7_1:75038414-75038433 | None:intergenic | 25.0% |
| ! | TGAAAAGGATAGACAAAAAA+AGG | + | chr7_1:75038425-75038444 | None:intergenic | 25.0% |
| ! | CAACTAAAAATTTCTTAAGG+TGG | + | chr7_1:75038727-75038746 | None:intergenic | 25.0% |
| !!! | TTATGTAGTTTGCATTTTTC+TGG | - | chr7_1:75039243-75039262 | Msa1038210:intron | 25.0% |
| !! | TTTAGATTTAAGATAGCAGA+GGG | - | chr7_1:75039427-75039446 | Msa1038210:intron | 25.0% |
| ! | GATATAGCTTATATTTGTTC+CGG | + | chr7_1:75039581-75039600 | None:intergenic | 25.0% |
| ! | TTAATAACCAACTGTTAATG+AGG | + | chr7_1:75039897-75039916 | None:intergenic | 25.0% |
| ! | ACTTATTGAAAAAATACTCG+TGG | + | chr7_1:75040239-75040258 | None:intergenic | 25.0% |
| ! | ATGTTTCCAACATTCAATAA+TGG | + | chr7_1:75040721-75040740 | None:intergenic | 25.0% |
| AATGAAGAAGATGGAATCTA+GGG | + | chr7_1:75033926-75033945 | None:intergenic | 30.0% | |
| GAGTAAATTACCTTAATTGC+AGG | + | chr7_1:75033981-75034000 | None:intergenic | 30.0% | |
| ATGCATAGAAAAAACGAACA+TGG | + | chr7_1:75034005-75034024 | None:intergenic | 30.0% | |
| ! | TTCTACTTGTTGATATCATG+TGG | - | chr7_1:75034128-75034147 | Msa1038210:CDS | 30.0% |
| AGTTAGCTGCATTTGTATAT+TGG | - | chr7_1:75034527-75034546 | Msa1038210:intron | 30.0% | |
| TGCTTGTAAATATTCAGAGT+AGG | - | chr7_1:75034920-75034939 | Msa1038210:intron | 30.0% | |
| AGGTCCTTGAAAAGAATTAA+AGG | + | chr7_1:75034970-75034989 | None:intergenic | 30.0% | |
| !! | TTTAATTCTTTTCAAGGACC+TGG | - | chr7_1:75034969-75034988 | Msa1038210:intron | 30.0% |
| !! | ACTTTGGTTCTTCAATATTG+GGG | + | chr7_1:75035356-75035375 | None:intergenic | 30.0% |
| !! | GAACTTTGGTTCTTCAATAT+TGG | + | chr7_1:75035358-75035377 | None:intergenic | 30.0% |
| TATCACAATAGTTCTTCAGT+AGG | - | chr7_1:75035700-75035719 | Msa1038210:CDS | 30.0% | |
| AGTTCTTCAGTAGGAAATAT+TGG | - | chr7_1:75035709-75035728 | Msa1038210:CDS | 30.0% | |
| AAAAATAGAAGACACTTCCA+CGG | - | chr7_1:75035792-75035811 | Msa1038210:CDS | 30.0% | |
| ! | ATTTAAAATGTATGTCACCG+TGG | + | chr7_1:75035812-75035831 | None:intergenic | 30.0% |
| TCTTTACTACTCATATCCAA+TGG | + | chr7_1:75035931-75035950 | None:intergenic | 30.0% | |
| GTAGTAAAGAATGTTTCTTG+TGG | - | chr7_1:75035941-75035960 | Msa1038210:intron | 30.0% | |
| AACCAACATGCTGTTATATT+TGG | - | chr7_1:75036278-75036297 | Msa1038210:intron | 30.0% | |
| TACCAAATATAACAGCATGT+TGG | + | chr7_1:75036283-75036302 | None:intergenic | 30.0% | |
| TTAAAATGTCAAACTGCTTG+TGG | + | chr7_1:75036311-75036330 | None:intergenic | 30.0% | |
| TTAAAGGCCGAATTATTAAG+AGG | + | chr7_1:75036404-75036423 | None:intergenic | 30.0% | |
| AGACTGTTACAAAATTGGTT+TGG | - | chr7_1:75036423-75036442 | Msa1038210:intron | 30.0% | |
| GTGTTGCATATTATCATTAG+AGG | - | chr7_1:75036681-75036700 | Msa1038210:intron | 30.0% | |
| TGTTCTTTGTGATTAGGTAA+TGG | - | chr7_1:75036740-75036759 | Msa1038210:intron | 30.0% | |
| CTCATAAACGGTTAATTGAT+GGG | - | chr7_1:75036823-75036842 | Msa1038210:intron | 30.0% | |
| ! | TGCTTCTTGGATAGATTTTA+CGG | + | chr7_1:75036943-75036962 | None:intergenic | 30.0% |
| CTATACAATTTGATGCTTCT+TGG | + | chr7_1:75036956-75036975 | None:intergenic | 30.0% | |
| AAATTGTATAGTCAGAGTTC+TGG | - | chr7_1:75036965-75036984 | Msa1038210:intron | 30.0% | |
| AATTGTATAGTCAGAGTTCT+GGG | - | chr7_1:75036966-75036985 | Msa1038210:intron | 30.0% | |
| AAAACTTTCAATCTGATTGC+TGG | - | chr7_1:75037016-75037035 | Msa1038210:intron | 30.0% | |
| TTTAAGTCTATTAACTGGGA+TGG | - | chr7_1:75037196-75037215 | Msa1038210:intron | 30.0% | |
| ! | TTTGGTTTATTACCACTGTT+TGG | - | chr7_1:75037268-75037287 | Msa1038210:intron | 30.0% |
| AATGGTAATAAACCAAACAG+TGG | + | chr7_1:75037283-75037302 | None:intergenic | 30.0% | |
| ! | TAGAAGAATTTTGTTCCTAG+AGG | - | chr7_1:75037344-75037363 | Msa1038210:intron | 30.0% |
| GTTTGATCCATATATGGTTT+CGG | - | chr7_1:75037374-75037393 | Msa1038210:intron | 30.0% | |
| ! | TGGGTTAAAAGGTACAAATT+CGG | + | chr7_1:75037633-75037652 | None:intergenic | 30.0% |
| AACAAGTTAAAAGAAACGGA+GGG | - | chr7_1:75038251-75038270 | Msa1038210:intron | 30.0% | |
| ! | TTATCGTAAGTTTAGGGTTT+AGG | + | chr7_1:75038326-75038345 | None:intergenic | 30.0% |
| !!! | GTTTTTTTCTCTTTCCGTTT+TGG | - | chr7_1:75038536-75038555 | Msa1038210:intron | 30.0% |
| AATCTATCTTATGCTTACCA+AGG | - | chr7_1:75038812-75038831 | Msa1038210:intron | 30.0% | |
| ATCAAATTAGTTGCATTCCT+TGG | + | chr7_1:75038832-75038851 | None:intergenic | 30.0% | |
| TAGTAATTATCAACTTGCCT+TGG | + | chr7_1:75039006-75039025 | None:intergenic | 30.0% | |
| ! | GTTTTCTAATAATCCCCAAA+AGG | - | chr7_1:75039179-75039198 | Msa1038210:intron | 30.0% |
| CTTAAATCTAAACAGCAAAG+TGG | + | chr7_1:75039419-75039438 | None:intergenic | 30.0% | |
| ! | GTTTAGATTTAAGATAGCAG+AGG | - | chr7_1:75039426-75039445 | Msa1038210:intron | 30.0% |
| GGACAACACTAATATTAGAA+CGG | + | chr7_1:75039754-75039773 | None:intergenic | 30.0% | |
| TCTAATATTAGTGTTGTCCT+AGG | - | chr7_1:75039755-75039774 | Msa1038210:intron | 30.0% | |
| ! | AACTTTTCCTCATTAACAGT+TGG | - | chr7_1:75039887-75039906 | Msa1038210:intron | 30.0% |
| TTAACCATTGTTATACTTGG+AGG | - | chr7_1:75039913-75039932 | Msa1038210:intron | 30.0% | |
| ! | TAGCGCAAAATGAATCTTTT+AGG | + | chr7_1:75040131-75040150 | None:intergenic | 30.0% |
| ATTGAAAAAATACTCGTGGA+AGG | + | chr7_1:75040235-75040254 | None:intergenic | 30.0% | |
| TCCTTGCATCAAATAAATGA+CGG | + | chr7_1:75040305-75040324 | None:intergenic | 30.0% | |
| !! | CAAGGCAAATTGATAATGTT+AGG | + | chr7_1:75040467-75040486 | None:intergenic | 30.0% |
| GATTATATTGCTTGAGTACA+AGG | + | chr7_1:75040485-75040504 | None:intergenic | 30.0% | |
| CAGTTTATGGTGCAAATTAT+GGG | - | chr7_1:75040664-75040683 | Msa1038210:intron | 30.0% | |
| AAGCTTCCATTATTGAATGT+TGG | - | chr7_1:75040712-75040731 | Msa1038210:intron | 30.0% | |
| ATGCTAGTTAACTAACTACT+AGG | - | chr7_1:75040970-75040989 | Msa1038210:CDS | 30.0% | |
| TGCTAGTTAACTAACTACTA+GGG | - | chr7_1:75040971-75040990 | Msa1038210:CDS | 30.0% | |
| AAGTGATGAAGGATAATAGG+TGG | + | chr7_1:75033834-75033853 | None:intergenic | 35.0% | |
| ACGAAGTGATGAAGGATAAT+AGG | + | chr7_1:75033837-75033856 | None:intergenic | 35.0% | |
| !!! | TGGTATTGGTTTTGGGAAAA+GGG | + | chr7_1:75033900-75033919 | None:intergenic | 35.0% |
| !!! | TTGGTATTGGTTTTGGGAAA+AGG | + | chr7_1:75033901-75033920 | None:intergenic | 35.0% |
| !!! | AGGGTTTTGGTATTGGTTTT+GGG | + | chr7_1:75033907-75033926 | None:intergenic | 35.0% |
| !!! | TAGGGTTTTGGTATTGGTTT+TGG | + | chr7_1:75033908-75033927 | None:intergenic | 35.0% |
| GAATGAAGAAGATGGAATCT+AGG | + | chr7_1:75033927-75033946 | None:intergenic | 35.0% | |
| ! | CACTTATTCACTATTTCTCG+CGG | - | chr7_1:75034042-75034061 | Msa1038210:three_prime_UTR | 35.0% |
| AATAGGGGATAGATCTGTAA+AGG | + | chr7_1:75034092-75034111 | None:intergenic | 35.0% | |
| ACAACAGCAAATTGTTGAGA+CGG | - | chr7_1:75034240-75034259 | Msa1038210:CDS | 35.0% | |
| GGAACAAAATGAGTCTGAAA+AGG | - | chr7_1:75034261-75034280 | Msa1038210:CDS | 35.0% | |
| ACAAAATGAGTCTGAAAAGG+TGG | - | chr7_1:75034264-75034283 | Msa1038210:CDS | 35.0% | |
| !!! | TGAGAGTGTTTTCAGAATGT+TGG | - | chr7_1:75034336-75034355 | Msa1038210:intron | 35.0% |
| CTCGTGTTAAGATTCTTGAT+GGG | - | chr7_1:75034434-75034453 | Msa1038210:intron | 35.0% | |
| !! | TCAGCTTACATCTGTTTTTC+TGG | - | chr7_1:75034498-75034517 | Msa1038210:intron | 35.0% |
| !! | GTATATTGGTAGCATTGATC+TGG | - | chr7_1:75034541-75034560 | Msa1038210:intron | 35.0% |
| TAAGAAAAGCCAAAAGAGCT+TGG | + | chr7_1:75034582-75034601 | None:intergenic | 35.0% | |
| TTGTTTCAGACACAAATTCC+AGG | + | chr7_1:75034990-75035009 | None:intergenic | 35.0% | |
| CAGAGAGAGACATAGTTAAA+TGG | + | chr7_1:75035027-75035046 | None:intergenic | 35.0% | |
| CAATTTCTTGTCGTGAGAAT+AGG | + | chr7_1:75035116-75035135 | None:intergenic | 35.0% | |
| AACAGAAAATGAATCTGTGC+AGG | - | chr7_1:75035284-75035303 | Msa1038210:intron | 35.0% | |
| ! | TGAGTCGTTGCCTTTAAAAA+TGG | + | chr7_1:75035319-75035338 | None:intergenic | 35.0% |
| ! | TTTTCATTGCTAGGAATCTG+CGG | + | chr7_1:75035511-75035530 | None:intergenic | 35.0% |
| TTTCGGTATTGTATTAGAGC+TGG | + | chr7_1:75035545-75035564 | None:intergenic | 35.0% | |
| ! | TGATAGCCTTGGTTAATCTT+CGG | + | chr7_1:75035628-75035647 | None:intergenic | 35.0% |
| ! | CACACTTCCATGTTTCTAAA+AGG | - | chr7_1:75035872-75035891 | Msa1038210:CDS | 35.0% |
| AATGGCGATTAAAACGTGAA+AGG | + | chr7_1:75035913-75035932 | None:intergenic | 35.0% | |
| !! | TTTCACGTTTTAATCGCCAT+TGG | - | chr7_1:75035912-75035931 | Msa1038210:CDS | 35.0% |
| AGAATGTTTCTTGTGGTAGT+TGG | - | chr7_1:75035948-75035967 | Msa1038210:intron | 35.0% | |
| TAAATATACTGGCAAAGGGT+TGG | - | chr7_1:75035984-75036003 | Msa1038210:intron | 35.0% | |
| AAATATACTGGCAAAGGGTT+GGG | - | chr7_1:75035985-75036004 | Msa1038210:intron | 35.0% | |
| TTTCTTCCCTAACAAGAAAC+AGG | - | chr7_1:75036024-75036043 | Msa1038210:intron | 35.0% | |
| !! | TGCAGAAGTATTGCATAGAT+TGG | - | chr7_1:75036074-75036093 | Msa1038210:CDS | 35.0% |
| ACATAGAAAGGAAAACTGGT+AGG | - | chr7_1:75036103-75036122 | Msa1038210:CDS | 35.0% | |
| CATAGAAAGGAAAACTGGTA+GGG | - | chr7_1:75036104-75036123 | Msa1038210:CDS | 35.0% | |
| !! | CTGTTACAAAATTGGTTTGG+TGG | - | chr7_1:75036426-75036445 | Msa1038210:intron | 35.0% |
| ! | CATGTAAAGGGCTTTGTAAT+TGG | - | chr7_1:75036615-75036634 | Msa1038210:intron | 35.0% |
| TGCAACACGAAGACATAATA+TGG | + | chr7_1:75036669-75036688 | None:intergenic | 35.0% | |
| GAAATGTTGAGATCAAAGAC+AGG | - | chr7_1:75036703-75036722 | Msa1038210:intron | 35.0% | |
| GCTTATTGAAGGCTCATAAA+CGG | - | chr7_1:75036811-75036830 | Msa1038210:intron | 35.0% | |
| GCTCATAAACGGTTAATTGA+TGG | - | chr7_1:75036822-75036841 | Msa1038210:intron | 35.0% | |
| AATTAAACTTCCTGCTTGTG+AGG | + | chr7_1:75036904-75036923 | None:intergenic | 35.0% | |
| TCACAAGCAGGAAGTTTAAT+TGG | - | chr7_1:75036903-75036922 | Msa1038210:intron | 35.0% | |
| CACAAGCAGGAAGTTTAATT+GGG | - | chr7_1:75036904-75036923 | Msa1038210:intron | 35.0% | |
| GGAAGTTTAATTGGGAAACA+AGG | - | chr7_1:75036912-75036931 | Msa1038210:intron | 35.0% | |
| AGTTTAATTGGGAAACAAGG+AGG | - | chr7_1:75036915-75036934 | Msa1038210:intron | 35.0% | |
| ACAAAACACGTTTGACGAAT+AGG | + | chr7_1:75037237-75037256 | None:intergenic | 35.0% | |
| !! | GTTTTGTTCTTGTCACTGTT+TGG | - | chr7_1:75037250-75037269 | Msa1038210:intron | 35.0% |
| CAAAAGCGACAATTAAAGAG+AGG | + | chr7_1:75037324-75037343 | None:intergenic | 35.0% | |
| GATCAAACTCATTAACCTCT+AGG | + | chr7_1:75037362-75037381 | None:intergenic | 35.0% | |
| GTTCTATCCGAAACCATATA+TGG | + | chr7_1:75037384-75037403 | None:intergenic | 35.0% | |
| TGGTTTCGGATAGAACATTA+TGG | - | chr7_1:75037388-75037407 | Msa1038210:intron | 35.0% | |
| ! | TTTAATATCGACTGCGTGAA+AGG | + | chr7_1:75037753-75037772 | None:intergenic | 35.0% |
| CAACAAGTTAAAAGAAACGG+AGG | - | chr7_1:75038250-75038269 | Msa1038210:intron | 35.0% | |
| CGGGAATTATCGTAAGTTTA+GGG | + | chr7_1:75038332-75038351 | None:intergenic | 35.0% | |
| AAGCATAAACTACAGAAGAC+TGG | + | chr7_1:75038488-75038507 | None:intergenic | 35.0% | |
| TGCAGACAAAAAAACAACAG+AGG | + | chr7_1:75038609-75038628 | None:intergenic | 35.0% | |
| TAATTATCAACTTGCCTTGG+AGG | + | chr7_1:75039003-75039022 | None:intergenic | 35.0% | |
| ! | TATTGAAGCATCTCTTCCAT+AGG | + | chr7_1:75039085-75039104 | None:intergenic | 35.0% |
| TATGGAAGAGATGCTTCAAT+AGG | - | chr7_1:75039084-75039103 | Msa1038210:intron | 35.0% | |
| ! | TCACCATACTACTTCCTTTT+GGG | + | chr7_1:75039196-75039215 | None:intergenic | 35.0% |
| ! | ATCACCATACTACTTCCTTT+TGG | + | chr7_1:75039197-75039216 | None:intergenic | 35.0% |
| AAAGGAAGTAGTATGGTGAT+TGG | - | chr7_1:75039197-75039216 | Msa1038210:intron | 35.0% | |
| AAGGAAGTAGTATGGTGATT+GGG | - | chr7_1:75039198-75039217 | Msa1038210:intron | 35.0% | |
| TGGTGATTGGGATGATATAT+TGG | - | chr7_1:75039210-75039229 | Msa1038210:intron | 35.0% | |
| ! | TTGCATTTTTCTGGATGTCT+TGG | - | chr7_1:75039252-75039271 | Msa1038210:intron | 35.0% |
| TTGTCTTGCTAATGCTATTG+TGG | - | chr7_1:75039495-75039514 | Msa1038210:intron | 35.0% | |
| TGTTTCTTGTATGGTAACAG+TGG | + | chr7_1:75039620-75039639 | None:intergenic | 35.0% | |
| GTTACCATACAAGAAACAAG+AGG | - | chr7_1:75039622-75039641 | Msa1038210:intron | 35.0% | |
| ! | AACTCCTCTTGTTTCTTGTA+TGG | + | chr7_1:75039629-75039648 | None:intergenic | 35.0% |
| AACACTAATATTAGAACGGC+TGG | + | chr7_1:75039750-75039769 | None:intergenic | 35.0% | |
| AAAAGTTTGCCAATTAGGGT+GGG | + | chr7_1:75039874-75039893 | None:intergenic | 35.0% | |
| GAGGAAAAGTTTGCCAATTA+GGG | + | chr7_1:75039878-75039897 | None:intergenic | 35.0% | |
| TGAGGAAAAGTTTGCCAATT+AGG | + | chr7_1:75039879-75039898 | None:intergenic | 35.0% | |
| TCTACCTCCAAGTATAACAA+TGG | + | chr7_1:75039920-75039939 | None:intergenic | 35.0% | |
| GTTATACTTGGAGGTAGAAT+TGG | - | chr7_1:75039922-75039941 | Msa1038210:intron | 35.0% | |
| ACATTACAGTTCATAGCATG+CGG | - | chr7_1:75040032-75040051 | Msa1038210:intron | 35.0% | |
| CTTGCATCAAATAAATGACG+GGG | + | chr7_1:75040303-75040322 | None:intergenic | 35.0% | |
| CCTTGCATCAAATAAATGAC+GGG | + | chr7_1:75040304-75040323 | None:intergenic | 35.0% | |
| TAACATCCAAGACATGCATT+CGG | + | chr7_1:75040433-75040452 | None:intergenic | 35.0% | |
| GCAATATAATCCTGAATCTG+TGG | - | chr7_1:75040494-75040513 | Msa1038210:CDS | 35.0% | |
| ! | ATCTGTGGTGCAGAATTTTA+TGG | - | chr7_1:75040509-75040528 | Msa1038210:CDS | 35.0% |
| GCAGTTTATGGTGCAAATTA+TGG | - | chr7_1:75040663-75040682 | Msa1038210:intron | 35.0% | |
| AATTATGGGTACCAATGATG+AGG | - | chr7_1:75040678-75040697 | Msa1038210:intron | 35.0% | |
| ! | AAGGTCGAACAAACTTTTGA+TGG | - | chr7_1:75040866-75040885 | Msa1038210:CDS | 35.0% |
| CATGCGATTTATGAAAAGCT+AGG | + | chr7_1:75040953-75040972 | None:intergenic | 35.0% | |
| GCTAGTTAACTAACTACTAG+GGG | - | chr7_1:75040972-75040991 | Msa1038210:CDS | 35.0% | |
| ! | AATAGGTGGTGGCATAACAT+TGG | + | chr7_1:75033820-75033839 | None:intergenic | 40.0% |
| TGATGAAGGATAATAGGTGG+TGG | + | chr7_1:75033831-75033850 | None:intergenic | 40.0% | |
| TTGTGAGAACGAAGTGATGA+AGG | + | chr7_1:75033845-75033864 | None:intergenic | 40.0% | |
| !!! | GGTATTGGTTTTGGGAAAAG+GGG | + | chr7_1:75033899-75033918 | None:intergenic | 40.0% |
| !! | GGAATCTAGGGTTTTGGTAT+TGG | + | chr7_1:75033914-75033933 | None:intergenic | 40.0% |
| !! | GAAGATGGAATCTAGGGTTT+TGG | + | chr7_1:75033920-75033939 | None:intergenic | 40.0% |
| ACATCTCTACCCTGCAATTA+AGG | - | chr7_1:75033968-75033987 | Msa1038210:three_prime_UTR | 40.0% | |
| !! | TTTGTTTGTGTTTCTGGCAG+TGG | - | chr7_1:75034172-75034191 | Msa1038210:CDS | 40.0% |
| ! | ATTCTGAAAACACTCTCACC+AGG | + | chr7_1:75034334-75034353 | None:intergenic | 40.0% |
| !! | AATGTTGGTTCCTGCTCAAA+AGG | - | chr7_1:75034351-75034370 | Msa1038210:intron | 40.0% |
| GCTCGTGTTAAGATTCTTGA+TGG | - | chr7_1:75034433-75034452 | Msa1038210:intron | 40.0% | |
| AGTAGGAATTATTGGGAGTG+AGG | - | chr7_1:75034937-75034956 | Msa1038210:intron | 40.0% | |
| GTAGGAATTATTGGGAGTGA+GGG | - | chr7_1:75034938-75034957 | Msa1038210:intron | 40.0% | |
| AAGGATCCGAAGATTAACCA+AGG | - | chr7_1:75035619-75035638 | Msa1038210:intron | 40.0% | |
| TTCTTGTGGTAGTTGGAACT+TGG | - | chr7_1:75035955-75035974 | Msa1038210:intron | 40.0% | |
| ! | CCTCTACCTGTTTCTTGTTA+GGG | + | chr7_1:75036033-75036052 | None:intergenic | 40.0% |
| CCTAACAAGAAACAGGTAGA+GGG | - | chr7_1:75036031-75036050 | Msa1038210:CDS | 40.0% | |
| AGTATTGCATAGATTGGCAG+TGG | - | chr7_1:75036080-75036099 | Msa1038210:CDS | 40.0% | |
| GTGGACATAGAAAGGAAAAC+TGG | - | chr7_1:75036099-75036118 | Msa1038210:CDS | 40.0% | |
| TCTAGTTAGACAACGAGTTC+AGG | - | chr7_1:75036140-75036159 | Msa1038210:CDS | 40.0% | |
| TCAAAGATTGCAATTGGACG+AGG | - | chr7_1:75036334-75036353 | Msa1038210:intron | 40.0% | |
| CCTGTCAGAAAAATTCCAGA+AGG | + | chr7_1:75036466-75036485 | None:intergenic | 40.0% | |
| !!! | CCTTCTGGAATTTTTCTGAC+AGG | - | chr7_1:75036463-75036482 | Msa1038210:intron | 40.0% |
| ! | CTGACAGGTCATGATAATGT+AGG | - | chr7_1:75036478-75036497 | Msa1038210:intron | 40.0% |
| TTACATGCCACCTACAATCT+CGG | + | chr7_1:75036602-75036621 | None:intergenic | 40.0% | |
| AGATTGTAGGTGGCATGTAA+AGG | - | chr7_1:75036602-75036621 | Msa1038210:intron | 40.0% | |
| GATTGTAGGTGGCATGTAAA+GGG | - | chr7_1:75036603-75036622 | Msa1038210:intron | 40.0% | |
| GTATCAGCTAAAGATGAGTC+TGG | - | chr7_1:75036762-75036781 | Msa1038210:intron | 40.0% | |
| ! | TAAGTTTGGGATTCATCCAC+TGG | - | chr7_1:75037135-75037154 | Msa1038210:intron | 40.0% |
| ! | AAGTTTGGGATTCATCCACT+GGG | - | chr7_1:75037136-75037155 | Msa1038210:intron | 40.0% |
| ! | CTTGGTTGTTGTTGTTACCA+AGG | - | chr7_1:75037454-75037473 | Msa1038210:intron | 40.0% |
| GGTTGCAAAATCGTTGAAGA+GGG | - | chr7_1:75037549-75037568 | Msa1038210:intron | 40.0% | |
| ! | TCGTAAGTTTAGGGTTTAGG+TGG | + | chr7_1:75038323-75038342 | None:intergenic | 40.0% |
| GCGGGAATTATCGTAAGTTT+AGG | + | chr7_1:75038333-75038352 | None:intergenic | 40.0% | |
| !!! | TCTCTTTCCGTTTTGGTTCT+TGG | - | chr7_1:75038543-75038562 | Msa1038210:intron | 40.0% |
| !!! | TTTCCGTTTTGGTTCTTGGA+TGG | - | chr7_1:75038547-75038566 | Msa1038210:intron | 40.0% |
| !!! | TTCCGTTTTGGTTCTTGGAT+GGG | - | chr7_1:75038548-75038567 | Msa1038210:intron | 40.0% |
| TCATCTTGAAGGGCAAAAAC+AGG | + | chr7_1:75038641-75038660 | None:intergenic | 40.0% | |
| ! | TTTTTGCCCTTCAAGATGAC+AGG | - | chr7_1:75038642-75038661 | Msa1038210:intron | 40.0% |
| ! | TTTTGCCCTTCAAGATGACA+GGG | - | chr7_1:75038643-75038662 | Msa1038210:intron | 40.0% |
| GATCTTTCTCCAGATGCAAA+TGG | - | chr7_1:75038849-75038868 | Msa1038210:intron | 40.0% | |
| GGTTATTAGCCATTTGCATC+TGG | + | chr7_1:75038861-75038880 | None:intergenic | 40.0% | |
| ATAGGCGGATATACCATGAT+GGG | + | chr7_1:75039067-75039086 | None:intergenic | 40.0% | |
| ATCCCCAAAAGGAAGTAGTA+TGG | - | chr7_1:75039190-75039209 | Msa1038210:intron | 40.0% | |
| ! | CACCATACTACTTCCTTTTG+GGG | + | chr7_1:75039195-75039214 | None:intergenic | 40.0% |
| ATAAACAACGACAGACAGAC+TGG | + | chr7_1:75039284-75039303 | None:intergenic | 40.0% | |
| ! | TGAATTTTGTGCAATAGCCG+TGG | - | chr7_1:75039340-75039359 | Msa1038210:intron | 40.0% |
| !! | TTCACAACTAGCCTTTACCA+CGG | + | chr7_1:75039360-75039379 | None:intergenic | 40.0% |
| CAGCAAATGTCAATCAACAC+TGG | + | chr7_1:75039389-75039408 | None:intergenic | 40.0% | |
| TTCAGCTTAACATCCAAGTG+TGG | + | chr7_1:75039465-75039484 | None:intergenic | 40.0% | |
| AGCTATATCAGAAGAGCAAG+TGG | - | chr7_1:75039592-75039611 | Msa1038210:intron | 40.0% | |
| GCTATATCAGAAGAGCAAGT+GGG | - | chr7_1:75039593-75039612 | Msa1038210:intron | 40.0% | |
| CTATATCAGAAGAGCAAGTG+GGG | - | chr7_1:75039594-75039613 | Msa1038210:intron | 40.0% | |
| AAGAAACAAGAGGAGTTCCT+GGG | - | chr7_1:75039632-75039651 | Msa1038210:intron | 40.0% | |
| GAGATGACAGTTGAAATCAG+CGG | - | chr7_1:75039655-75039674 | Msa1038210:intron | 40.0% | |
| AGATGACAGTTGAAATCAGC+GGG | - | chr7_1:75039656-75039675 | Msa1038210:intron | 40.0% | |
| AACAGCACAGCAATTGATAC+AGG | - | chr7_1:75039696-75039715 | Msa1038210:intron | 40.0% | |
| GATACAGGTAATCCTGATCT+TGG | - | chr7_1:75039711-75039730 | Msa1038210:intron | 40.0% | |
| GCAAATCAAAGACCAAGATC+AGG | + | chr7_1:75039726-75039745 | None:intergenic | 40.0% | |
| ! | TCCTAGGTTTTCTTCAGACT+AGG | - | chr7_1:75039771-75039790 | Msa1038210:intron | 40.0% |
| TCCTAGTCTGAAGAAAACCT+AGG | + | chr7_1:75039775-75039794 | None:intergenic | 40.0% | |
| CTAAATTAGCCCACCCTAAT+TGG | - | chr7_1:75039862-75039881 | Msa1038210:intron | 40.0% | |
| GAAAAGTTTGCCAATTAGGG+TGG | + | chr7_1:75039875-75039894 | None:intergenic | 40.0% | |
| ! | ATCAAATAAATGACGGGGTG+AGG | + | chr7_1:75040298-75040317 | None:intergenic | 40.0% |
| CCCGTCATTTATTTGATGCA+AGG | - | chr7_1:75040301-75040320 | Msa1038210:intron | 40.0% | |
| AAATTCTGCACCACAGATTC+AGG | + | chr7_1:75040507-75040526 | None:intergenic | 40.0% | |
| ! | TGTGGTGCAGAATTTTATGG+CGG | - | chr7_1:75040512-75040531 | Msa1038210:CDS | 40.0% |
| CATAGACAGAACTATGAGCA+GGG | + | chr7_1:75040602-75040621 | None:intergenic | 40.0% | |
| ! | TAGTTCTACTGCCTCATCAT+TGG | + | chr7_1:75040692-75040711 | None:intergenic | 40.0% |
| ! | TGTTTCTGTTGGCAGTCATT+TGG | - | chr7_1:75040842-75040861 | Msa1038210:CDS | 40.0% |
| TTCTGGCAGTGGAAATTCCA+TGG | - | chr7_1:75034183-75034202 | Msa1038210:CDS | 45.0% | |
| TGAGTCTGAAAAGGTGGTTG+AGG | - | chr7_1:75034270-75034289 | Msa1038210:intron | 45.0% | |
| TTCTTCTCAGGCTCAACGAT+CGG | + | chr7_1:75034298-75034317 | None:intergenic | 45.0% | |
| TCGTTGAGCCTGAGAAGAAA+TGG | - | chr7_1:75034299-75034318 | Msa1038210:intron | 45.0% | |
| TTGGTTCCTGCTCAAAAGGT+TGG | - | chr7_1:75034355-75034374 | Msa1038210:intron | 45.0% | |
| CAAAAGGTTGGCGGGATAAT+TGG | - | chr7_1:75034367-75034386 | Msa1038210:intron | 45.0% | |
| !!! | GCGTCGCATTTTCTAAGACA+AGG | - | chr7_1:75034835-75034854 | Msa1038210:intron | 45.0% |
| AGAACCAAAGTTCCAGATGC+AGG | - | chr7_1:75035365-75035384 | Msa1038210:intron | 45.0% | |
| ! | TGATCCTGCATCTGGAACTT+TGG | + | chr7_1:75035372-75035391 | None:intergenic | 45.0% |
| !!! | CAGGTTTTGAATTTACCCGC+TGG | + | chr7_1:75035472-75035491 | None:intergenic | 45.0% |
| CAGCGGGTAAATTCAAAACC+TGG | - | chr7_1:75035470-75035489 | Msa1038210:intron | 45.0% | |
| CCCTAACAAGAAACAGGTAG+AGG | - | chr7_1:75036030-75036049 | Msa1038210:intron | 45.0% | |
| ! | CCCTCTACCTGTTTCTTGTT+AGG | + | chr7_1:75036034-75036053 | None:intergenic | 45.0% |
| GATTGGCAGTGGACATAGAA+AGG | - | chr7_1:75036091-75036110 | Msa1038210:CDS | 45.0% | |
| AAAGGAAAACTGGTAGGGAG+CGG | - | chr7_1:75036109-75036128 | Msa1038210:CDS | 45.0% | |
| GATTGCAATTGGACGAGGAT+AGG | - | chr7_1:75036339-75036358 | Msa1038210:intron | 45.0% | |
| !! | TTGGTTTGGTGGTGAAGTGA+AGG | - | chr7_1:75036437-75036456 | Msa1038210:intron | 45.0% |
| GTGAAGTGAAGGATTCCTTC+TGG | - | chr7_1:75036448-75036467 | Msa1038210:intron | 45.0% | |
| TACATGCCACCTACAATCTC+GGG | + | chr7_1:75036601-75036620 | None:intergenic | 45.0% | |
| TTCAATAAGCCATCCACAGC+AGG | + | chr7_1:75036801-75036820 | None:intergenic | 45.0% | |
| TGCTGTGGATGGCTTATTGA+AGG | - | chr7_1:75036800-75036819 | Msa1038210:intron | 45.0% | |
| ! | ATTACAGCTCTAGTACCCAG+TGG | + | chr7_1:75037154-75037173 | None:intergenic | 45.0% |
| GACGAATAGGAAGAGGAACT+TGG | + | chr7_1:75037224-75037243 | None:intergenic | 45.0% | |
| CACGTTTGACGAATAGGAAG+AGG | + | chr7_1:75037231-75037250 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr7_1:75037437-75037456 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr7_1:75037438-75037457 | None:intergenic | 45.0% |
| CGGTTGCAAAATCGTTGAAG+AGG | - | chr7_1:75037548-75037567 | Msa1038210:intron | 45.0% | |
| TGCAAAATCGTTGAAGAGGG+AGG | - | chr7_1:75037552-75037571 | Msa1038210:intron | 45.0% | |
| ! | CCTTTTAACCCATATGACCC+CGG | - | chr7_1:75037641-75037660 | Msa1038210:intron | 45.0% |
| CAAAACGACATGCTTTGCAG+CGG | - | chr7_1:75037687-75037706 | Msa1038210:intron | 45.0% | |
| AGCCCATCCAAGAACCAAAA+CGG | + | chr7_1:75038553-75038572 | None:intergenic | 45.0% | |
| AACCACCCTGTCATCTTGAA+GGG | + | chr7_1:75038651-75038670 | None:intergenic | 45.0% | |
| ACAGGGTGGTTGAAGTAGTA+GGG | - | chr7_1:75038660-75038679 | Msa1038210:intron | 45.0% | |
| AATGGCTAATAACCACCCTG+TGG | - | chr7_1:75038867-75038886 | Msa1038210:intron | 45.0% | |
| TTATCAACTTGCCTTGGAGG+TGG | + | chr7_1:75039000-75039019 | None:intergenic | 45.0% | |
| TAGGCGGATATACCATGATG+GGG | + | chr7_1:75039066-75039085 | None:intergenic | 45.0% | |
| CATAGGCGGATATACCATGA+TGG | + | chr7_1:75039068-75039087 | None:intergenic | 45.0% | |
| CATCATGGTATATCCGCCTA+TGG | - | chr7_1:75039066-75039085 | Msa1038210:intron | 45.0% | |
| ! | TGAAGCATCTCTTCCATAGG+CGG | + | chr7_1:75039082-75039101 | None:intergenic | 45.0% |
| !! | GAAAAGTACCTGTGTGACCA+TGG | + | chr7_1:75039145-75039164 | None:intergenic | 45.0% |
| TTGTGCAATAGCCGTGGTAA+AGG | - | chr7_1:75039346-75039365 | Msa1038210:intron | 45.0% | |
| AGATAGCAGAGGGTGATGTT+AGG | - | chr7_1:75039437-75039456 | Msa1038210:intron | 45.0% | |
| GTGATGTTAGGTTCCACACT+TGG | - | chr7_1:75039449-75039468 | Msa1038210:intron | 45.0% | |
| TCGTACGCTGATGCTGTTAT+TGG | - | chr7_1:75039550-75039569 | Msa1038210:intron | 45.0% | |
| GATGCTGTTATTGGAACAGC+CGG | - | chr7_1:75039559-75039578 | Msa1038210:intron | 45.0% | |
| CAAGAAACAAGAGGAGTTCC+TGG | - | chr7_1:75039631-75039650 | Msa1038210:intron | 45.0% | |
| AGAAACAAGAGGAGTTCCTG+GGG | - | chr7_1:75039633-75039652 | Msa1038210:intron | 45.0% | |
| ATTTCAACTGTCATCTCCCC+AGG | + | chr7_1:75039652-75039671 | None:intergenic | 45.0% | |
| ! | AATAAATGACGGGGTGAGGA+TGG | + | chr7_1:75040294-75040313 | None:intergenic | 45.0% |
| ! | AGACATGCATTCGGTGAGAT+AGG | + | chr7_1:75040424-75040443 | None:intergenic | 45.0% |
| ATCTCACCGAATGCATGTCT+TGG | - | chr7_1:75040424-75040443 | Msa1038210:CDS | 45.0% | |
| GAATTGTATCCTTGGTCTGC+AGG | + | chr7_1:75040576-75040595 | None:intergenic | 45.0% | |
| CAGGGTAGGAATTGTATCCT+TGG | + | chr7_1:75040584-75040603 | None:intergenic | 45.0% | |
| GCATAGACAGAACTATGAGC+AGG | + | chr7_1:75040603-75040622 | None:intergenic | 45.0% | |
| TGCACCATAAACTGCACCAT+AGG | + | chr7_1:75040658-75040677 | None:intergenic | 45.0% | |
| CTATTCGACATTGCGCTACA+TGG | - | chr7_1:75040767-75040786 | Msa1038210:intron | 45.0% | |
| !! | CACCAGTGTTCTGTTTCTGT+TGG | - | chr7_1:75040831-75040850 | Msa1038210:CDS | 45.0% |
| TGCCAACAGAAACAGAACAC+TGG | + | chr7_1:75040836-75040855 | None:intergenic | 45.0% | |
| CTGTTGGCAGTCATTTGGAA+AGG | - | chr7_1:75040847-75040866 | Msa1038210:CDS | 45.0% | |
| !! | ATTAAATATAAGATTTATTA+AGG | + | chr7_1:75037955-75037974 | None:intergenic | 5.0% |
| GAAAAGGGGCTAAGTGAGAG+TGG | + | chr7_1:75033885-75033904 | None:intergenic | 50.0% | |
| GGGTGCGAGAATGAAGAAGA+TGG | + | chr7_1:75033935-75033954 | None:intergenic | 50.0% | |
| CAGTGGAAATTCCATGGCTG+AGG | - | chr7_1:75034189-75034208 | Msa1038210:CDS | 50.0% | |
| GTTCTGATCAACCTCAGCCA+TGG | + | chr7_1:75034203-75034222 | None:intergenic | 50.0% | |
| ! | GCTGAGGTTGATCAGAACGT+AGG | - | chr7_1:75034205-75034224 | Msa1038210:CDS | 50.0% |
| TGAGCCTGAGAAGAAATGGC+CGG | - | chr7_1:75034303-75034322 | Msa1038210:intron | 50.0% | |
| GTTCCTGCTCAAAAGGTTGG+CGG | - | chr7_1:75034358-75034377 | Msa1038210:intron | 50.0% | |
| TTCCTGCTCAAAAGGTTGGC+GGG | - | chr7_1:75034359-75034378 | Msa1038210:intron | 50.0% | |
| AGGTTGGCGGGATAATTGGT+CGG | - | chr7_1:75034371-75034390 | Msa1038210:intron | 50.0% | |
| ! | AAGATTCTTGATGGGCCTCC+CGG | - | chr7_1:75034442-75034461 | Msa1038210:intron | 50.0% |
| !! | ACAGCCCGTTCTAAAGTTCC+GGG | + | chr7_1:75034463-75034482 | None:intergenic | 50.0% |
| !! | CACAGCCCGTTCTAAAGTTC+CGG | + | chr7_1:75034464-75034483 | None:intergenic | 50.0% |
| CTCAATGCTGATCCTGCATC+TGG | + | chr7_1:75035380-75035399 | None:intergenic | 50.0% | |
| CGGCAAGACATCAATCATCC+AGG | + | chr7_1:75035491-75035510 | None:intergenic | 50.0% | |
| ACAAGAAACAGGTAGAGGGC+TGG | - | chr7_1:75036035-75036054 | Msa1038210:CDS | 50.0% | |
| CAAGAAACAGGTAGAGGGCT+GGG | - | chr7_1:75036036-75036055 | Msa1038210:CDS | 50.0% | |
| AAGAAACAGGTAGAGGGCTG+GGG | - | chr7_1:75036037-75036056 | Msa1038210:CDS | 50.0% | |
| AAAACTGGTAGGGAGCGGAT+GGG | - | chr7_1:75036114-75036133 | Msa1038210:CDS | 50.0% | |
| CTTGCTGATCCCGAGATTGT+AGG | - | chr7_1:75036589-75036608 | Msa1038210:intron | 50.0% | |
| ! | GGGCTTTGTAATTGGTGCTC+TGG | - | chr7_1:75036623-75036642 | Msa1038210:intron | 50.0% |
| TTCTTCTCTTCCACCTGCTG+TGG | - | chr7_1:75036785-75036804 | Msa1038210:intron | 50.0% | |
| AATAAGCCATCCACAGCAGG+TGG | + | chr7_1:75036798-75036817 | None:intergenic | 50.0% | |
| !! | GATGGGTTAGATGCTCCTTC+AGG | - | chr7_1:75036840-75036859 | Msa1038210:intron | 50.0% |
| GTTAGATGCTCCTTCAGGTG+TGG | - | chr7_1:75036845-75036864 | Msa1038210:intron | 50.0% | |
| AAACTTCCTGCTTGTGAGGC+TGG | + | chr7_1:75036900-75036919 | None:intergenic | 50.0% | |
| !! | ATAGTCAGAGTTCTGGGAGC+AGG | - | chr7_1:75036972-75036991 | Msa1038210:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr7_1:75037433-75037452 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr7_1:75037439-75037458 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr7_1:75037436-75037455 | Msa1038210:intron | 50.0% | |
| CAGCGCGAGTTTAACAACCT+TGG | + | chr7_1:75037474-75037493 | None:intergenic | 50.0% | |
| TTCTTCTCCCTAAACCGTGC+CGG | - | chr7_1:75037523-75037542 | Msa1038210:intron | 50.0% | |
| AGAGGTAGATCGCAAGATCG+TGG | - | chr7_1:75037587-75037606 | Msa1038210:intron | 50.0% | |
| AGATCGCAAGATCGTGGAAG+CGG | - | chr7_1:75037593-75037612 | Msa1038210:intron | 50.0% | |
| ! | CCGGGGTCATATGGGTTAAA+AGG | + | chr7_1:75037644-75037663 | None:intergenic | 50.0% |
| !! | CGCTGCAAAGCATGTCGTTT+TGG | + | chr7_1:75037689-75037708 | None:intergenic | 50.0% |
| GCTTTGCAGCGGAAGAGAAA+TGG | - | chr7_1:75037698-75037717 | Msa1038210:intron | 50.0% | |
| CAACCACCCTGTCATCTTGA+AGG | + | chr7_1:75038652-75038671 | None:intergenic | 50.0% | |
| GACAGGGTGGTTGAAGTAGT+AGG | - | chr7_1:75038659-75038678 | Msa1038210:intron | 50.0% | |
| CAGGGTGGTTGAAGTAGTAG+GGG | - | chr7_1:75038661-75038680 | Msa1038210:intron | 50.0% | |
| GAAGTAGTAGGGGATCCCAT+TGG | - | chr7_1:75038671-75038690 | Msa1038210:intron | 50.0% | |
| ACTGCCTTGTGCACTCCAAT+GGG | + | chr7_1:75038689-75038708 | None:intergenic | 50.0% | |
| TGAGGAGCAAGTCCAAATCC+AGG | + | chr7_1:75038970-75038989 | None:intergenic | 50.0% | |
| CTTGGAGGTGGCATGAATTG+AGG | + | chr7_1:75038988-75039007 | None:intergenic | 50.0% | |
| CTCAATTCATGCCACCTCCA+AGG | - | chr7_1:75038986-75039005 | Msa1038210:intron | 50.0% | |
| !! | AATGGAGGAGGCATTTCAGC+TGG | + | chr7_1:75039033-75039052 | None:intergenic | 50.0% |
| AGCTGAAATGCCTCCTCCAT+TGG | - | chr7_1:75039032-75039051 | Msa1038210:intron | 50.0% | |
| TGATGGGGCTGTTTGTCCAA+TGG | + | chr7_1:75039051-75039070 | None:intergenic | 50.0% | |
| TTGGACAAACAGCCCCATCA+TGG | - | chr7_1:75039051-75039070 | Msa1038210:intron | 50.0% | |
| ! | GGAAGGTGCAGACTGAGTAT+TGG | + | chr7_1:75039124-75039143 | None:intergenic | 50.0% |
| TACTCAGTCTGCACCTTCCA+TGG | - | chr7_1:75039125-75039144 | Msa1038210:intron | 50.0% | |
| AGTACCTGTGTGACCATGGA+AGG | + | chr7_1:75039141-75039160 | None:intergenic | 50.0% | |
| ACAGCATCAGCGTACGATAG+AGG | + | chr7_1:75039547-75039566 | None:intergenic | 50.0% | |
| TCATAGCATGCGGCATGTCT+TGG | - | chr7_1:75040042-75040061 | Msa1038210:intron | 50.0% | |
| TTGTATCCTTGGTCTGCAGG+AGG | + | chr7_1:75040573-75040592 | None:intergenic | 50.0% | |
| GACAGAACTATGAGCAGGGT+AGG | + | chr7_1:75040598-75040617 | None:intergenic | 50.0% | |
| GGAGCCTATGGTGCAGTTTA+TGG | - | chr7_1:75040651-75040670 | Msa1038210:intron | 50.0% | |
| TGAGAGTGGAGGGAGTGACT+TGG | + | chr7_1:75033871-75033890 | None:intergenic | 55.0% | |
| AGGGGCTAAGTGAGAGTGGA+GGG | + | chr7_1:75033881-75033900 | None:intergenic | 55.0% | |
| AAGGGGCTAAGTGAGAGTGG+AGG | + | chr7_1:75033882-75033901 | None:intergenic | 55.0% | |
| GAGCCTGAGAAGAAATGGCC+GGG | - | chr7_1:75034304-75034323 | Msa1038210:intron | 55.0% | |
| ! | ATCCCGCCAACCTTTTGAGC+AGG | + | chr7_1:75034364-75034383 | None:intergenic | 55.0% |
| GGCGGGATAATTGGTCGGAA+AGG | - | chr7_1:75034376-75034395 | Msa1038210:intron | 55.0% | |
| ! | GGCCTCCCGGAACTTTAGAA+CGG | - | chr7_1:75034455-75034474 | Msa1038210:intron | 55.0% |
| !! | GCCTCCCGGAACTTTAGAAC+GGG | - | chr7_1:75034456-75034475 | Msa1038210:intron | 55.0% |
| CACGAAGCTCTGCATTCCAG+CGG | - | chr7_1:75035453-75035472 | Msa1038210:intron | 55.0% | |
| ACGAAGCTCTGCATTCCAGC+GGG | - | chr7_1:75035454-75035473 | Msa1038210:intron | 55.0% | |
| GAAAACTGGTAGGGAGCGGA+TGG | - | chr7_1:75036113-75036132 | Msa1038210:CDS | 55.0% | |
| GCTGATCCCGAGATTGTAGG+TGG | - | chr7_1:75036592-75036611 | Msa1038210:intron | 55.0% | |
| TCTCTTCCACCTGCTGTGGA+TGG | - | chr7_1:75036789-75036808 | Msa1038210:intron | 55.0% | |
| ATGCTCCTTCAGGTGTGGCT+GGG | - | chr7_1:75036850-75036869 | Msa1038210:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+GGG | + | chr7_1:75037425-75037444 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr7_1:75037425-75037444 | Msa1038210:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr7_1:75037431-75037450 | Msa1038210:intron | 55.0% | |
| ! | CAACGATTTTGCAACCGCGC+CGG | + | chr7_1:75037545-75037564 | None:intergenic | 55.0% |
| AATCGTTGAAGAGGGAGGCG+CGG | - | chr7_1:75037557-75037576 | Msa1038210:intron | 55.0% | |
| ACGAACTCTTCTCCGCGAAC+CGG | + | chr7_1:75037663-75037682 | None:intergenic | 55.0% | |
| TGCCCTTCAAGATGACAGGG+TGG | - | chr7_1:75038646-75038665 | Msa1038210:intron | 55.0% | |
| GGATCCCATTGGAGTGCACA+AGG | - | chr7_1:75038682-75038701 | Msa1038210:intron | 55.0% | |
| CACTGCCTTGTGCACTCCAA+TGG | + | chr7_1:75038690-75038709 | None:intergenic | 55.0% | |
| CATTGGAGTGCACAAGGCAG+TGG | - | chr7_1:75038688-75038707 | Msa1038210:intron | 55.0% | |
| ACCACCACCCCACCAATCAT+GGG | - | chr7_1:75038906-75038925 | Msa1038210:intron | 55.0% | |
| AGGTGGACCCCATGATTGGT+GGG | + | chr7_1:75038917-75038936 | None:intergenic | 55.0% | |
| CAATCATGGGGTCCACCTCA+GGG | - | chr7_1:75038919-75038938 | Msa1038210:intron | 55.0% | |
| GACCTCCACCAGCATTTGGT+GGG | + | chr7_1:75038948-75038967 | None:intergenic | 55.0% | |
| !! | GAGGAGGCATTTCAGCTGGT+GGG | + | chr7_1:75039029-75039048 | None:intergenic | 55.0% |
| GGCTGTTTGTCCAATGGAGG+AGG | + | chr7_1:75039045-75039064 | None:intergenic | 55.0% | |
| TGGGGCTGTTTGTCCAATGG+AGG | + | chr7_1:75039048-75039067 | None:intergenic | 55.0% | |
| TGCACCTTCCATGGTCACAC+AGG | - | chr7_1:75039134-75039153 | Msa1038210:intron | 55.0% | |
| ! | GCATGTCCTGGATTGGAAGG+TGG | + | chr7_1:75040630-75040649 | None:intergenic | 55.0% |
| ! | CCAGCATGTCCTGGATTGGA+AGG | + | chr7_1:75040633-75040652 | None:intergenic | 55.0% |
| CCTTCCAATCCAGGACATGC+TGG | - | chr7_1:75040630-75040649 | Msa1038210:intron | 55.0% | |
| CAGCCCGGCCATTTCTTCTC+AGG | + | chr7_1:75034310-75034329 | None:intergenic | 60.0% | |
| CTGAGAAGAAATGGCCGGGC+TGG | - | chr7_1:75034308-75034327 | Msa1038210:intron | 60.0% | |
| !! | GCCCGTTCTAAAGTTCCGGG+AGG | + | chr7_1:75034460-75034479 | None:intergenic | 60.0% |
| CGCTGGAATGCAGAGCTTCG+TGG | + | chr7_1:75035455-75035474 | None:intergenic | 60.0% | |
| GATGCTCCTTCAGGTGTGGC+TGG | - | chr7_1:75036849-75036868 | Msa1038210:intron | 60.0% | |
| TCCTTCAGGTGTGGCTGGGA+AGG | - | chr7_1:75036854-75036873 | Msa1038210:intron | 60.0% | |
| ACCTTCCCAGCCACACCTGA+AGG | + | chr7_1:75036858-75036877 | None:intergenic | 60.0% | |
| CTAGTGCCAGCCTCACAAGC+AGG | - | chr7_1:75036891-75036910 | Msa1038210:intron | 60.0% | |
| CACTAAGTGGGGTCGGCTAC+AGG | + | chr7_1:75037426-75037445 | None:intergenic | 60.0% | |
| CTGTAGCCGACCCCACTTAG+TGG | - | chr7_1:75037424-75037443 | Msa1038210:intron | 60.0% | |
| !! | ATTTTGCAACCGCGCCGGCA+CGG | + | chr7_1:75037540-75037559 | None:intergenic | 60.0% |
| CTTGCGATCTACCTCTGCGC+CGG | + | chr7_1:75037583-75037602 | None:intergenic | 60.0% | |
| ! | ACCCATATGACCCCGGTTCG+CGG | - | chr7_1:75037648-75037667 | Msa1038210:intron | 60.0% |
| TCCGCGAACCGGGGTCATAT+GGG | + | chr7_1:75037652-75037671 | None:intergenic | 60.0% | |
| GAACTCTTCTCCGCGAACCG+GGG | + | chr7_1:75037661-75037680 | None:intergenic | 60.0% | |
| CGAACTCTTCTCCGCGAACC+GGG | + | chr7_1:75037662-75037681 | None:intergenic | 60.0% | |
| ! | GCACTGGCATGTGCTCCACA+GGG | + | chr7_1:75038885-75038904 | None:intergenic | 60.0% |
| ! | CATGATTGGTGGGGTGGTGG+TGG | + | chr7_1:75038907-75038926 | None:intergenic | 60.0% |
| CACCACCACCCCACCAATCA+TGG | - | chr7_1:75038905-75038924 | Msa1038210:intron | 60.0% | |
| CCACCACCCCACCAATCATG+GGG | - | chr7_1:75038907-75038926 | Msa1038210:intron | 60.0% | |
| GGTGGACCCCATGATTGGTG+GGG | + | chr7_1:75038916-75038935 | None:intergenic | 60.0% | |
| GAGGTGGACCCCATGATTGG+TGG | + | chr7_1:75038918-75038937 | None:intergenic | 60.0% | |
| CCTGAGGTGGACCCCATGAT+TGG | + | chr7_1:75038921-75038940 | None:intergenic | 60.0% | |
| CCAATCATGGGGTCCACCTC+AGG | - | chr7_1:75038918-75038937 | Msa1038210:intron | 60.0% | |
| TTTGGTGGGAGACCCTGAGG+TGG | + | chr7_1:75038934-75038953 | None:intergenic | 60.0% | |
| ! | GCATTTGGTGGGAGACCCTG+AGG | + | chr7_1:75038937-75038956 | None:intergenic | 60.0% |
| CAGGGTCTCCCACCAAATGC+TGG | - | chr7_1:75038937-75038956 | Msa1038210:intron | 60.0% | |
| GGTCTCCCACCAAATGCTGG+TGG | - | chr7_1:75038940-75038959 | Msa1038210:intron | 60.0% | |
| CTCCCACCAAATGCTGGTGG+AGG | - | chr7_1:75038943-75038962 | Msa1038210:intron | 60.0% | |
| GGACCTCCACCAGCATTTGG+TGG | + | chr7_1:75038949-75038968 | None:intergenic | 60.0% | |
| CCAGGACCTCCACCAGCATT+TGG | + | chr7_1:75038952-75038971 | None:intergenic | 60.0% | |
| CCAAATGCTGGTGGAGGTCC+TGG | - | chr7_1:75038949-75038968 | Msa1038210:intron | 60.0% | |
| GCTGGTGGAGGTCCTGGATT+TGG | - | chr7_1:75038955-75038974 | Msa1038210:intron | 60.0% | |
| !! | GGAGGAGGCATTTCAGCTGG+TGG | + | chr7_1:75039030-75039049 | None:intergenic | 60.0% |
| ! | TATGGCGGAAGCTGCAGCAC+CGG | - | chr7_1:75040527-75040546 | Msa1038210:CDS | 60.0% |
| ! | CCACCTGTTTGTTGCTGCGC+CGG | + | chr7_1:75040549-75040568 | None:intergenic | 60.0% |
| CGGCGCAGCAACAAACAGGT+GGG | - | chr7_1:75040547-75040566 | Msa1038210:CDS | 60.0% | |
| GCGTCACCACCTTCCAATCC+AGG | - | chr7_1:75040621-75040640 | Msa1038210:intron | 60.0% | |
| GGCTCCAGCATGTCCTGGAT+TGG | + | chr7_1:75040637-75040656 | None:intergenic | 60.0% | |
| CCATAGGCTCCAGCATGTCC+TGG | + | chr7_1:75040642-75040661 | None:intergenic | 60.0% | |
| CCAGGACATGCTGGAGCCTA+TGG | - | chr7_1:75040639-75040658 | Msa1038210:intron | 60.0% | |
| !! | AAGAAATGGCCGGGCTGGCC+TGG | - | chr7_1:75034313-75034332 | Msa1038210:intron | 65.0% |
| ACACTCTCACCAGGCCAGCC+CGG | + | chr7_1:75034325-75034344 | None:intergenic | 65.0% | |
| GGGCTGGGGTAAGTTGCACG+AGG | - | chr7_1:75036051-75036070 | Msa1038210:CDS | 65.0% | |
| ! | AACCGCGCCGGCACGGTTTA+GGG | + | chr7_1:75037533-75037552 | None:intergenic | 65.0% |
| CTCCGCGAACCGGGGTCATA+TGG | + | chr7_1:75037653-75037672 | None:intergenic | 65.0% | |
| CTGGCATGTGCTCCACAGGG+TGG | + | chr7_1:75038882-75038901 | None:intergenic | 65.0% | |
| !! | GGCACTGGCATGTGCTCCAC+AGG | + | chr7_1:75038886-75038905 | None:intergenic | 65.0% |
| CCCCATGATTGGTGGGGTGG+TGG | + | chr7_1:75038910-75038929 | None:intergenic | 65.0% | |
| GGACCCCATGATTGGTGGGG+TGG | + | chr7_1:75038913-75038932 | None:intergenic | 65.0% | |
| ! | GCACCGGCGCAGCAACAAAC+AGG | - | chr7_1:75040543-75040562 | Msa1038210:CDS | 65.0% |
| CCGGCGCAGCAACAAACAGG+TGG | - | chr7_1:75040546-75040565 | Msa1038210:CDS | 65.0% | |
| ! | CTCCCTAAACCGTGCCGGCG+CGG | - | chr7_1:75037528-75037547 | Msa1038210:intron | 70.0% |
| ! | CAACCGCGCCGGCACGGTTT+AGG | + | chr7_1:75037534-75037553 | None:intergenic | 70.0% |
| ! | GTTGAAGAGGGAGGCGCGGC+CGG | - | chr7_1:75037561-75037580 | Msa1038210:intron | 70.0% |
| !! | TGGTGGGGTGGTGGTGGCAC+TGG | + | chr7_1:75038901-75038920 | None:intergenic | 70.0% |
| GGTGGGCCTCCTGCAGACCA+AGG | - | chr7_1:75040564-75040583 | Msa1038210:CDS | 70.0% | |
| !! | GGGAGGCGCGGCCGGCGCAG+AGG | - | chr7_1:75037569-75037588 | Msa1038210:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 75033794 | 75041015 | 75033794 | ID=Msa1038210;Name=Msa1038210 |
| chr7_1 | mRNA | 75033794 | 75041015 | 75033794 | ID=Msa1038210-mRNA-1;Parent=Msa1038210;Name=Msa1038210-mRNA-1;_AED=0.12;_eAED=0.12;_QI=8|1|1|1|0.83|0.85|7|320|508 |
| chr7_1 | exon | 75033794 | 75034287 | 75033794 | ID=Msa1038210-mRNA-1:exon:19098;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75035092 | 75035286 | 75035092 | ID=Msa1038210-mRNA-1:exon:19097;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75035654 | 75035947 | 75035654 | ID=Msa1038210-mRNA-1:exon:19096;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75036031 | 75036179 | 75036031 | ID=Msa1038210-mRNA-1:exon:19095;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75037816 | 75038053 | 75037816 | ID=Msa1038210-mRNA-1:exon:19094;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75040329 | 75040617 | 75040329 | ID=Msa1038210-mRNA-1:exon:19093;Parent=Msa1038210-mRNA-1 |
| chr7_1 | exon | 75040820 | 75041015 | 75040820 | ID=Msa1038210-mRNA-1:exon:19092;Parent=Msa1038210-mRNA-1 |
| chr7_1 | five_prime_UTR | 75041008 | 75041015 | 75041008 | ID=Msa1038210-mRNA-1:five_prime_utr;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75040820 | 75041007 | 75040820 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75040329 | 75040617 | 75040329 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75037816 | 75038053 | 75037816 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75036031 | 75036179 | 75036031 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75035654 | 75035947 | 75035654 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75035092 | 75035286 | 75035092 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | CDS | 75034114 | 75034287 | 75034114 | ID=Msa1038210-mRNA-1:cds;Parent=Msa1038210-mRNA-1 |
| chr7_1 | three_prime_UTR | 75033794 | 75034113 | 75033794 | ID=Msa1038210-mRNA-1:three_prime_utr;Parent=Msa1038210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
