Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048750 | XP_003610912.2 | 87.755 | 49 | 6 | 0 | 27 | 75 | 628 | 676 | 6.54e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048750 | G7K7W5 | 87.755 | 49 | 6 | 0 | 27 | 75 | 628 | 676 | 3.13e-16 | 81.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa1048750 | -0.806549 | 7.795323e-50 | -8.615850e-47 |
| Msa0007850 | Msa1048750 | -0.809619 | 1.729985e-50 | -8.615850e-47 |
| Msa0010770 | Msa1048750 | -0.808165 | 3.541985e-50 | -8.615850e-47 |
| Msa0017320 | Msa1048750 | -0.811439 | 6.998224e-51 | -8.615850e-47 |
| Msa0029260 | Msa1048750 | -0.811382 | 7.198033e-51 | -8.615850e-47 |
| Msa0033880 | Msa1048750 | -0.836005 | 1.205683e-56 | -8.615850e-47 |
| Msa0036370 | Msa1048750 | -0.819694 | 1.015429e-52 | -8.615850e-47 |
| Msa0041690 | Msa1048750 | -0.803449 | 3.467483e-49 | -8.615850e-47 |
| Msa0043500 | Msa1048750 | -0.808151 | 3.566135e-50 | -8.615850e-47 |
| Msa0047250 | Msa1048750 | -0.804794 | 1.820344e-49 | -8.615850e-47 |
| Msa0058310 | Msa1048750 | -0.800497 | 1.401672e-48 | -8.615850e-47 |
| Msa0074750 | Msa1048750 | -0.850447 | 1.688147e-60 | -8.615850e-47 |
| Msa0076780 | Msa1048750 | -0.807109 | 5.935490e-50 | -8.615850e-47 |
| Msa0077900 | Msa1048750 | -0.819968 | 8.788086e-53 | -8.615850e-47 |
| Msa0081650 | Msa1048750 | -0.819699 | 1.012743e-52 | -8.615850e-47 |
| Msa0084430 | Msa1048750 | -0.812225 | 4.718621e-51 | -8.615850e-47 |
| Msa0090030 | Msa1048750 | -0.820622 | 6.223853e-53 | -8.615850e-47 |
| Msa0090390 | Msa1048750 | -0.811070 | 8.412042e-51 | -8.615850e-47 |
| Msa0090550 | Msa1048750 | -0.804045 | 2.608175e-49 | -8.615850e-47 |
| Msa0092170 | Msa1048750 | -0.829241 | 5.746641e-55 | -8.615850e-47 |
| Msa0092440 | Msa1048750 | -0.816221 | 6.182987e-52 | -8.615850e-47 |
| Msa0096580 | Msa1048750 | -0.805027 | 1.627249e-49 | -8.615850e-47 |
| Msa0097950 | Msa1048750 | -0.820284 | 7.438867e-53 | -8.615850e-47 |
| Msa0105520 | Msa1048750 | -0.812587 | 3.933666e-51 | -8.615850e-47 |
| Msa0108870 | Msa1048750 | -0.812845 | 3.454200e-51 | -8.615850e-47 |
| Msa0112300 | Msa1048750 | 0.817871 | 2.633327e-52 | -8.615850e-47 |
| Msa0605000 | Msa1048750 | -0.802967 | 4.363639e-49 | -8.615850e-47 |
| Msa0614510 | Msa1048750 | -0.810983 | 8.786062e-51 | -8.615850e-47 |
| Msa0618200 | Msa1048750 | 0.805313 | 1.417779e-49 | -8.615850e-47 |
| Msa0618930 | Msa1048750 | -0.808754 | 2.651857e-50 | -8.615850e-47 |
| Msa0618950 | Msa1048750 | -0.823889 | 1.086233e-53 | -8.615850e-47 |
| Msa0620330 | Msa1048750 | -0.804638 | 1.962269e-49 | -8.615850e-47 |
| Msa0626850 | Msa1048750 | -0.800826 | 1.201323e-48 | -8.615850e-47 |
| Msa0628420 | Msa1048750 | -0.813944 | 1.980295e-51 | -8.615850e-47 |
| Msa0628500 | Msa1048750 | -0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0640940 | Msa1048750 | -0.812517 | 4.073791e-51 | -8.615850e-47 |
| Msa0643320 | Msa1048750 | -0.802599 | 5.197290e-49 | -8.615850e-47 |
| Msa0646130 | Msa1048750 | -0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0653320 | Msa1048750 | 0.810547 | 1.091593e-50 | -8.615850e-47 |
| Msa0657460 | Msa1048750 | 0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0662630 | Msa1048750 | -0.809493 | 1.841845e-50 | -8.615850e-47 |
| Msa0664760 | Msa1048750 | -0.803385 | 3.575171e-49 | -8.615850e-47 |
| Msa0679360 | Msa1048750 | -0.803639 | 3.166488e-49 | -8.615850e-47 |
| Msa0686080 | Msa1048750 | -0.823719 | 1.190596e-53 | -8.615850e-47 |
| Msa0691290 | Msa1048750 | -0.801530 | 8.622797e-49 | -8.615850e-47 |
| Msa0693790 | Msa1048750 | -0.805107 | 1.566228e-49 | -8.615850e-47 |
| Msa0697720 | Msa1048750 | -0.811036 | 8.557263e-51 | -8.615850e-47 |
| Msa0705390 | Msa1048750 | -0.837806 | 4.182670e-57 | -8.615850e-47 |
| Msa0705990 | Msa1048750 | -0.802163 | 6.390319e-49 | -8.615850e-47 |
| Msa0743530 | Msa1048750 | -0.820511 | 6.599450e-53 | -8.615850e-47 |
| Msa0744090 | Msa1048750 | -0.803336 | 3.660152e-49 | -8.615850e-47 |
| Msa0744100 | Msa1048750 | -0.813124 | 2.999554e-51 | -8.615850e-47 |
| Msa0756930 | Msa1048750 | -0.812195 | 4.790826e-51 | -8.615850e-47 |
| Msa0781270 | Msa1048750 | -0.812868 | 3.413507e-51 | -8.615850e-47 |
| Msa0787150 | Msa1048750 | -0.811021 | 8.621728e-51 | -8.615850e-47 |
| Msa0788120 | Msa1048750 | -0.835572 | 1.552408e-56 | -8.615850e-47 |
| Msa0790170 | Msa1048750 | 0.817919 | 2.568596e-52 | -8.615850e-47 |
| Msa0817120 | Msa1048750 | -0.801706 | 7.935662e-49 | -8.615850e-47 |
| Msa0820530 | Msa1048750 | 0.814843 | 1.252920e-51 | -8.615850e-47 |
| Msa0821800 | Msa1048750 | -0.805154 | 1.530520e-49 | -8.615850e-47 |
| Msa0822170 | Msa1048750 | -0.804506 | 2.090954e-49 | -8.615850e-47 |
| Msa0825270 | Msa1048750 | -0.816752 | 4.704082e-52 | -8.615850e-47 |
| Msa0825280 | Msa1048750 | -0.814301 | 1.652192e-51 | -8.615850e-47 |
| Msa0826150 | Msa1048750 | -0.803804 | 2.926372e-49 | -8.615850e-47 |
| Msa0836500 | Msa1048750 | -0.823558 | 1.298675e-53 | -8.615850e-47 |
| Msa0126880 | Msa1048750 | -0.803306 | 3.713292e-49 | -8.615850e-47 |
| Msa0126910 | Msa1048750 | -0.831607 | 1.516742e-55 | -8.615850e-47 |
| Msa0127040 | Msa1048750 | -0.849014 | 4.243669e-60 | -8.615850e-47 |
| Msa0127850 | Msa1048750 | -0.838825 | 2.284755e-57 | -8.615850e-47 |
| Msa0131450 | Msa1048750 | -0.802230 | 6.191620e-49 | -8.615850e-47 |
| Msa0131700 | Msa1048750 | -0.806021 | 1.006970e-49 | -8.615850e-47 |
| Msa0138210 | Msa1048750 | -0.840067 | 1.087137e-57 | -8.615850e-47 |
| Msa0138640 | Msa1048750 | -0.800379 | 1.481409e-48 | -8.615850e-47 |
| Msa0140520 | Msa1048750 | 0.804424 | 2.174758e-49 | -8.615850e-47 |
| Msa0142500 | Msa1048750 | -0.852162 | 5.532128e-61 | -8.615850e-47 |
| Msa0145150 | Msa1048750 | -0.815085 | 1.107332e-51 | -8.615850e-47 |
| Msa0146080 | Msa1048750 | -0.844253 | 8.476752e-59 | -8.615850e-47 |
| Msa0166750 | Msa1048750 | -0.810173 | 1.314567e-50 | -8.615850e-47 |
| Msa0169300 | Msa1048750 | -0.809864 | 1.532879e-50 | -8.615850e-47 |
| Msa0171980 | Msa1048750 | -0.830376 | 3.040449e-55 | -8.615850e-47 |
| Msa0172000 | Msa1048750 | -0.804025 | 2.633164e-49 | -8.615850e-47 |
| Msa0174000 | Msa1048750 | -0.833740 | 4.482115e-56 | -8.615850e-47 |
| Msa0175290 | Msa1048750 | 0.817098 | 3.932928e-52 | -8.615850e-47 |
| Msa0183420 | Msa1048750 | -0.805245 | 1.465055e-49 | -8.615850e-47 |
| Msa0183870 | Msa1048750 | -0.832551 | 8.860372e-56 | -8.615850e-47 |
| Msa0202410 | Msa1048750 | -0.801641 | 8.182906e-49 | -8.615850e-47 |
| Msa0210260 | Msa1048750 | -0.803754 | 2.997716e-49 | -8.615850e-47 |
| Msa0231790 | Msa1048750 | -0.802665 | 5.037659e-49 | -8.615850e-47 |
| Msa0233370 | Msa1048750 | -0.818342 | 2.060548e-52 | -8.615850e-47 |
| Msa0236070 | Msa1048750 | -0.806657 | 7.396919e-50 | -8.615850e-47 |
| Msa0238030 | Msa1048750 | -0.801271 | 9.741199e-49 | -8.615850e-47 |
| Msa0370160 | Msa1048750 | 0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0376600 | Msa1048750 | -0.801910 | 7.204137e-49 | -8.615850e-47 |
| Msa0379260 | Msa1048750 | -0.811559 | 6.590385e-51 | -8.615850e-47 |
| Msa0381000 | Msa1048750 | -0.819974 | 8.758984e-53 | -8.615850e-47 |
| Msa0381080 | Msa1048750 | -0.817988 | 2.477681e-52 | -8.615850e-47 |
| Msa0384260 | Msa1048750 | 0.800156 | 1.645108e-48 | -8.615850e-47 |
| Msa0387050 | Msa1048750 | -0.820381 | 7.068299e-53 | -8.615850e-47 |
| Msa0387880 | Msa1048750 | 0.816653 | 4.948804e-52 | -8.615850e-47 |
| Msa0387910 | Msa1048750 | -0.811340 | 7.353769e-51 | -8.615850e-47 |
| Msa0392200 | Msa1048750 | -0.812089 | 5.052248e-51 | -8.615850e-47 |
| Msa0413730 | Msa1048750 | -0.801934 | 7.124324e-49 | -8.615850e-47 |
| Msa0419520 | Msa1048750 | -0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0430870 | Msa1048750 | -0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0436190 | Msa1048750 | -0.803316 | 3.695494e-49 | -8.615850e-47 |
| Msa0439230 | Msa1048750 | -0.806785 | 6.948453e-50 | -8.615850e-47 |
| Msa0443430 | Msa1048750 | -0.809831 | 1.557948e-50 | -8.615850e-47 |
| Msa0446900 | Msa1048750 | -0.811475 | 6.870913e-51 | -8.615850e-47 |
| Msa0461590 | Msa1048750 | -0.801280 | 9.700235e-49 | -8.615850e-47 |
| Msa0467220 | Msa1048750 | -0.802523 | 5.387147e-49 | -8.615850e-47 |
| Msa0467260 | Msa1048750 | 0.812083 | 5.068246e-51 | -8.615850e-47 |
| Msa0474700 | Msa1048750 | -0.803066 | 4.161779e-49 | -8.615850e-47 |
| Msa0480780 | Msa1048750 | -0.803032 | 4.229709e-49 | -8.615850e-47 |
| Msa0481280 | Msa1048750 | -0.834772 | 2.470598e-56 | -8.615850e-47 |
| Msa0981430 | Msa1048750 | -0.804379 | 2.222592e-49 | -8.615850e-47 |
| Msa1001350 | Msa1048750 | -0.830963 | 2.183799e-55 | -8.615850e-47 |
| Msa1010070 | Msa1048750 | -0.809465 | 1.867039e-50 | -8.615850e-47 |
| Msa1025940 | Msa1048750 | -0.805214 | 1.487392e-49 | -8.615850e-47 |
| Msa1033970 | Msa1048750 | -0.808292 | 3.327997e-50 | -8.615850e-47 |
| Msa1036740 | Msa1048750 | -0.823109 | 1.652921e-53 | -8.615850e-47 |
| Msa1042660 | Msa1048750 | -0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa1048750 | Msa1048760 | 0.855821 | 4.876881e-62 | -8.615850e-47 |
| Msa1048750 | Msa1063420 | -0.800008 | 1.762829e-48 | -8.615850e-47 |
| Msa1048750 | Msa1070390 | -0.850373 | 1.771203e-60 | -8.615850e-47 |
| Msa1048750 | Msa1072600 | -0.806147 | 9.473541e-50 | -8.615850e-47 |
| Msa1048750 | Msa1088250 | 0.824446 | 8.038568e-54 | -8.615850e-47 |
| Msa1048750 | Msa1088290 | -0.805336 | 1.402358e-49 | -8.615850e-47 |
| Msa1048750 | Msa1089320 | -0.801789 | 7.628014e-49 | -8.615850e-47 |
| Msa1048750 | Msa1100520 | 0.995101 | 5.043012e-213 | -8.615850e-47 |
| Msa1048750 | Msa1100530 | 0.884711 | 1.518909e-71 | -8.615850e-47 |
| Msa1048750 | Msa1113590 | -0.809557 | 1.784469e-50 | -8.615850e-47 |
| Msa1048750 | Msa1122780 | -0.815759 | 7.841169e-52 | -8.615850e-47 |
| Msa1048750 | Msa1123350 | -0.801889 | 7.277465e-49 | -8.615850e-47 |
| Msa1048750 | Msa1127430 | -0.826384 | 2.794551e-54 | -8.615850e-47 |
| Msa1048750 | Msa1127540 | -0.809219 | 2.107919e-50 | -8.615850e-47 |
| Msa1048750 | Msa1144040 | -0.832773 | 7.806351e-56 | -8.615850e-47 |
| Msa1048750 | Msa1154490 | -0.809894 | 1.510093e-50 | -8.615850e-47 |
| Msa1048750 | Msa1158230 | -0.844448 | 7.512150e-59 | -8.615850e-47 |
| Msa1048750 | Msa1163870 | -0.836642 | 8.301980e-57 | -8.615850e-47 |
| Msa1048750 | Msa1164020 | -0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa1048750 | Msa1172130 | 0.807294 | 5.422017e-50 | -8.615850e-47 |
| Msa1048750 | Msa1176980 | -0.844819 | 5.971050e-59 | -8.615850e-47 |
| Msa1048750 | Msa1178050 | -0.832727 | 8.013028e-56 | -8.615850e-47 |
| Msa1048750 | Msa1199710 | -0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa1048750 | Msa1201640 | -0.811318 | 7.432880e-51 | -8.615850e-47 |
| Msa1048750 | Msa1201810 | -0.818548 | 1.850907e-52 | -8.615850e-47 |
| Msa1048750 | Msa1201830 | -0.824976 | 6.026405e-54 | -8.615850e-47 |
| Msa1048750 | Msa1205480 | -0.819457 | 1.149961e-52 | -8.615850e-47 |
| Msa1048750 | Msa1206650 | -0.801604 | 8.325271e-49 | -8.615850e-47 |
| Msa1048750 | Msa1207730 | -0.808908 | 2.457852e-50 | -8.615850e-47 |
| Msa1048750 | Msa1226610 | -0.800003 | 1.766742e-48 | -8.615850e-47 |
| Msa1048750 | Msa1250110 | -0.841352 | 5.005600e-58 | -8.615850e-47 |
| Msa1048750 | Msa1250730 | -0.843963 | 1.013785e-58 | -8.615850e-47 |
| Msa1048750 | Msa1254620 | -0.805123 | 1.553920e-49 | -8.615850e-47 |
| Msa1048750 | Msa1257070 | -0.801529 | 8.626606e-49 | -8.615850e-47 |
| Msa1048750 | Msa1264210 | -0.801939 | 7.106089e-49 | -8.615850e-47 |
| Msa1048750 | Msa1270660 | -0.806305 | 8.776347e-50 | -8.615850e-47 |
| Msa1048750 | Msa1294840 | -0.815959 | 7.074423e-52 | -8.615850e-47 |
| Msa1048750 | Msa1294960 | -0.808482 | 3.031483e-50 | -8.615850e-47 |
| Msa1048750 | Msa1296300 | -0.813967 | 1.957676e-51 | -8.615850e-47 |
| Msa1048750 | Msa1299820 | 0.823032 | 1.722548e-53 | -8.615850e-47 |
| Msa1048750 | Msa1307550 | -0.803803 | 2.928481e-49 | -8.615850e-47 |
| Msa1048750 | Msa1336040 | -0.818379 | 2.021669e-52 | -8.615850e-47 |
| Msa1048750 | Msa1339190 | -0.823413 | 1.403957e-53 | -8.615850e-47 |
| Msa1048750 | Msa1340830 | -0.837681 | 4.502623e-57 | -8.615850e-47 |
| Msa1048750 | Msa1344310 | -0.801735 | 7.825776e-49 | -8.615850e-47 |
| Msa1048750 | Msa1350690 | -0.800906 | 1.156550e-48 | -8.615850e-47 |
| Msa1048750 | Msa1351540 | -0.814009 | 1.915886e-51 | -8.615850e-47 |
| Msa1048750 | Msa1355700 | -0.806712 | 7.198796e-50 | -8.615850e-47 |
| Msa1048750 | Msa1369890 | -0.807162 | 5.783314e-50 | -8.615850e-47 |
| Msa1048750 | Msa1372290 | -0.800062 | 1.718481e-48 | -8.615850e-47 |
| Msa1048750 | Msa1383350 | -0.803973 | 2.699376e-49 | -8.615850e-47 |
| Msa1048750 | Msa1407970 | -0.827333 | 1.657355e-54 | -8.615850e-47 |
| Msa1048750 | Msa1411950 | -0.817871 | 2.633327e-52 | -8.615850e-47 |
| Msa1048750 | Msa1416260 | -0.835820 | 1.343325e-56 | -8.615850e-47 |
| Msa1048750 | Msa1420250 | -0.800972 | 1.121554e-48 | -8.615850e-47 |
| Msa1048750 | Msa1422840 | -0.828884 | 7.015104e-55 | -8.615850e-47 |
| Msa1048750 | Msa1426910 | -0.813804 | 2.125885e-51 | -8.615850e-47 |
| Msa1048750 | Msa1426920 | -0.802227 | 6.199015e-49 | -8.615850e-47 |
| Msa1048750 | Msa1438450 | -0.806889 | 6.604955e-50 | -8.615850e-47 |
| Msa1048750 | Msa1443610 | -0.807198 | 5.682707e-50 | -8.615850e-47 |
| Msa1048750 | Msa1450720 | -0.828583 | 8.294261e-55 | -8.615850e-47 |
| Msa1048750 | Msa1454680 | -0.803285 | 3.749141e-49 | -8.615850e-47 |
| Msa1048750 | Msa1454960 | -0.816350 | 5.787900e-52 | -8.615850e-47 |
| Msa1048750 | Msa1458810 | -0.853602 | 2.143998e-61 | -8.615850e-47 |
| Msa1048750 | Msa1463600 | -0.841576 | 4.369041e-58 | -8.615850e-47 |
| Msa0244970 | Msa1048750 | -0.833044 | 6.685689e-56 | -8.615850e-47 |
| Msa0244980 | Msa1048750 | -0.823560 | 1.296914e-53 | -8.615850e-47 |
| Msa0245430 | Msa1048750 | -0.807238 | 5.574043e-50 | -8.615850e-47 |
| Msa0251770 | Msa1048750 | -0.805824 | 1.107581e-49 | -8.615850e-47 |
| Msa0262480 | Msa1048750 | -0.812168 | 4.854901e-51 | -8.615850e-47 |
| Msa0269520 | Msa1048750 | -0.818568 | 1.831854e-52 | -8.615850e-47 |
| Msa0275360 | Msa1048750 | -0.802556 | 5.303978e-49 | -8.615850e-47 |
| Msa0283420 | Msa1048750 | -0.813036 | 3.136127e-51 | -8.615850e-47 |
| Msa0296980 | Msa1048750 | 0.850718 | 1.416790e-60 | -8.615850e-47 |
| Msa0304840 | Msa1048750 | -0.812076 | 5.084293e-51 | -8.615850e-47 |
| Msa0309880 | Msa1048750 | -0.805119 | 1.557018e-49 | -8.615850e-47 |
| Msa0313930 | Msa1048750 | -0.802440 | 5.603909e-49 | -8.615850e-47 |
| Msa0317640 | Msa1048750 | -0.807716 | 4.411960e-50 | -8.615850e-47 |
| Msa0321690 | Msa1048750 | -0.829002 | 6.566169e-55 | -8.615850e-47 |
| Msa0322900 | Msa1048750 | -0.804056 | 2.594056e-49 | -8.615850e-47 |
| Msa0324240 | Msa1048750 | -0.817719 | 2.850373e-52 | -8.615850e-47 |
| Msa0335320 | Msa1048750 | 0.836254 | 1.042088e-56 | -8.615850e-47 |
| Msa0343190 | Msa1048750 | -0.816962 | 4.219623e-52 | -8.615850e-47 |
| Msa0346990 | Msa1048750 | -0.808761 | 2.642831e-50 | -8.615850e-47 |
| Msa0347990 | Msa1048750 | -0.805599 | 1.234991e-49 | -8.615850e-47 |
| Msa0510290 | Msa1048750 | -0.823739 | 1.177727e-53 | -8.615850e-47 |
| Msa0511490 | Msa1048750 | -0.805566 | 1.254664e-49 | -8.615850e-47 |
| Msa0517090 | Msa1048750 | -0.813064 | 3.092857e-51 | -8.615850e-47 |
| Msa0518960 | Msa1048750 | -0.822033 | 2.940931e-53 | -8.615850e-47 |
| Msa0524590 | Msa1048750 | -0.803049 | 4.196866e-49 | -8.615850e-47 |
| Msa0531250 | Msa1048750 | -0.825208 | 5.314573e-54 | -8.615850e-47 |
| Msa0534410 | Msa1048750 | -0.823799 | 1.140114e-53 | -8.615850e-47 |
| Msa0537770 | Msa1048750 | -0.801599 | 8.346149e-49 | -8.615850e-47 |
| Msa0547990 | Msa1048750 | -0.800338 | 1.510193e-48 | -8.615850e-47 |
| Msa0550570 | Msa1048750 | -0.810377 | 1.188107e-50 | -8.615850e-47 |
| Msa0554290 | Msa1048750 | -0.817284 | 3.572386e-52 | -8.615850e-47 |
| Msa0557950 | Msa1048750 | 0.810113 | 1.354603e-50 | -8.615850e-47 |
| Msa0560500 | Msa1048750 | -0.820287 | 7.428984e-53 | -8.615850e-47 |
| Msa0565620 | Msa1048750 | 0.823778 | 1.153184e-53 | -8.615850e-47 |
| Msa0569780 | Msa1048750 | -0.804644 | 1.956704e-49 | -8.615850e-47 |
| Msa0576680 | Msa1048750 | -0.802523 | 5.387147e-49 | -8.615850e-47 |
| Msa0578090 | Msa1048750 | -0.810825 | 9.505145e-51 | -8.615850e-47 |
| Msa0586850 | Msa1048750 | -0.801219 | 9.981900e-49 | -8.615850e-47 |
| Msa0588090 | Msa1048750 | -0.813579 | 2.383251e-51 | -8.615850e-47 |
| Msa0588120 | Msa1048750 | -0.823471 | 1.360901e-53 | -8.615850e-47 |
| Msa0590650 | Msa1048750 | -0.809807 | 1.576541e-50 | -8.615850e-47 |
| Msa0594200 | Msa1048750 | -0.829425 | 5.185261e-55 | -8.615850e-47 |
| Msa0844110 | Msa1048750 | -0.808797 | 2.596063e-50 | -8.615850e-47 |
| Msa0844230 | Msa1048750 | -0.816082 | 6.641364e-52 | -8.615850e-47 |
| Msa0850710 | Msa1048750 | -0.821295 | 4.355292e-53 | -8.615850e-47 |
| Msa0851470 | Msa1048750 | -0.809293 | 2.032638e-50 | -8.615850e-47 |
| Msa0861830 | Msa1048750 | -0.818894 | 1.544681e-52 | -8.615850e-47 |
| Msa0869010 | Msa1048750 | -0.818181 | 2.241501e-52 | -8.615850e-47 |
| Msa0879850 | Msa1048750 | -0.805809 | 1.115577e-49 | -8.615850e-47 |
| Msa0880040 | Msa1048750 | -0.835584 | 1.541059e-56 | -8.615850e-47 |
| Msa0888940 | Msa1048750 | -0.801061 | 1.075335e-48 | -8.615850e-47 |
| Msa0892570 | Msa1048750 | -0.804177 | 2.448017e-49 | -8.615850e-47 |
| Msa0892640 | Msa1048750 | -0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0901450 | Msa1048750 | -0.812882 | 3.389806e-51 | -8.615850e-47 |
| Msa0903780 | Msa1048750 | -0.804289 | 2.319715e-49 | -8.615850e-47 |
| Msa0919470 | Msa1048750 | -0.808715 | 2.703098e-50 | -8.615850e-47 |
| Msa0945120 | Msa1048750 | -0.803831 | 2.889325e-49 | -8.615850e-47 |
| Msa0945240 | Msa1048750 | -0.803586 | 3.248100e-49 | -8.615850e-47 |
| Msa0947800 | Msa1048750 | -0.805879 | 1.078804e-49 | -8.615850e-47 |
| Msa0957870 | Msa1048750 | -0.819021 | 1.445495e-52 | -8.615850e-47 |
| Msa0957970 | Msa1048750 | -0.824960 | 6.081968e-54 | -8.615850e-47 |
| Msa0968440 | Msa1048750 | -0.811794 | 5.857144e-51 | -8.615850e-47 |
| Msa0970530 | Msa1048750 | -0.821692 | 3.526490e-53 | -8.615850e-47 |
| Msa0970600 | Msa1048750 | -0.849945 | 2.334792e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1048750 | MtrunA17_Chr5g0396101 | 87.755 | 49 | 6 | 0 | 27 | 75 | 275 | 323 | 9.76e-19 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 32 sgRNAs with CRISPR-Local
Find 32 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCACCTGGTTGCCCATAAC+CGG | 0.242390 | 7_2:+10640131 | None:intergenic |
| CCTGGTGGACAACCCGGTTA+TGG | 0.315095 | 7_2:-10640144 | Msa1048750:CDS |
| CGCATAACTAGGTGCGGCCT+GGG | 0.374054 | 7_2:+10640110 | None:intergenic |
| CTGGTGGACAACCCGGTTAT+GGG | 0.385117 | 7_2:-10640143 | Msa1048750:CDS |
| GCGCATAACTAGGTGCGGCC+TGG | 0.388775 | 7_2:+10640109 | None:intergenic |
| CAAGCAGCATATCCTACATA+TGG | 0.393896 | 7_2:-10640238 | Msa1048750:CDS |
| TATGCGCAAGTTGGTCATAC+TGG | 0.399918 | 7_2:-10640093 | Msa1048750:CDS |
| AACCGGGTTGTCCACCAGGC+TGG | 0.415446 | 7_2:+10640148 | None:intergenic |
| CTATATCTATATGCATCATC+GGG | 0.416909 | 7_2:-10640268 | Msa1048750:CDS |
| CAAGTTGGTCATACTGGTTA+TGG | 0.420943 | 7_2:-10640087 | Msa1048750:CDS |
| CTAGGTGCGGCCTGGGCACC+TGG | 0.421749 | 7_2:+10640117 | None:intergenic |
| CCATAACCGGGTTGTCCACC+AGG | 0.453267 | 7_2:+10640144 | None:intergenic |
| ACTATATCTATATGCATCAT+CGG | 0.493050 | 7_2:-10640269 | Msa1048750:CDS |
| ACCGGGTTGTCCACCAGGCT+GGG | 0.494134 | 7_2:+10640149 | None:intergenic |
| GGCTGGGCATAAACTTGTCC+AGG | 0.498525 | 7_2:+10640165 | None:intergenic |
| TGACCAACTTGCGCATAACT+AGG | 0.503715 | 7_2:+10640099 | None:intergenic |
| AATCACCCGCAGTCTGCACC+TGG | 0.524809 | 7_2:-10640183 | Msa1048750:CDS |
| TTATGGGCAACCAGGTGCCC+AGG | 0.525214 | 7_2:-10640127 | Msa1048750:CDS |
| CTTGTCCAGGTGCAGACTGC+GGG | 0.527053 | 7_2:+10640178 | None:intergenic |
| GCCCAGCCTGGTGGACAACC+CGG | 0.535827 | 7_2:-10640150 | Msa1048750:CDS |
| GCACCTGGTTGCCCATAACC+GGG | 0.540537 | 7_2:+10640132 | None:intergenic |
| GGACAAGTTTATGCCCAGCC+TGG | 0.546505 | 7_2:-10640162 | Msa1048750:CDS |
| CACTCTGCACTAGCTGCCGA+TGG | 0.553366 | 7_2:-10640210 | Msa1048750:CDS |
| CAACCCGGTTATGGGCAACC+AGG | 0.556358 | 7_2:-10640135 | Msa1048750:CDS |
| AAGCAGCATATCCTACATAT+GGG | 0.567067 | 7_2:-10640237 | Msa1048750:CDS |
| CAGAGTGCAGACCCATATGT+AGG | 0.574828 | 7_2:+10640226 | None:intergenic |
| CAAGTTTATGCCCAGCCTGG+TGG | 0.621083 | 7_2:-10640159 | Msa1048750:CDS |
| CTGCGGGTGATTGTAACCAT+CGG | 0.627649 | 7_2:+10640194 | None:intergenic |
| GCACCTAGTTATGCGCAAGT+TGG | 0.628557 | 7_2:-10640102 | Msa1048750:CDS |
| ACTTGTCCAGGTGCAGACTG+CGG | 0.644028 | 7_2:+10640177 | None:intergenic |
| AACTTGCGCATAACTAGGTG+CGG | 0.662539 | 7_2:+10640104 | None:intergenic |
| TATATCTATATGCATCATCG+GGG | 0.741642 | 7_2:-10640267 | Msa1048750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACTATATCTATATGCATCAT+CGG | - | chr7_2:10640096-10640115 | Msa1048750:CDS | 25.0% |
| CTATATCTATATGCATCATC+GGG | - | chr7_2:10640097-10640116 | Msa1048750:CDS | 30.0% | |
| TATATCTATATGCATCATCG+GGG | - | chr7_2:10640098-10640117 | Msa1048750:CDS | 30.0% | |
| AAGCAGCATATCCTACATAT+GGG | - | chr7_2:10640128-10640147 | Msa1048750:CDS | 35.0% | |
| CAAGCAGCATATCCTACATA+TGG | - | chr7_2:10640127-10640146 | Msa1048750:CDS | 40.0% | |
| !! | CAAGTTGGTCATACTGGTTA+TGG | - | chr7_2:10640278-10640297 | Msa1048750:CDS | 40.0% |
| AACTTGCGCATAACTAGGTG+CGG | + | chr7_2:10640264-10640283 | None:intergenic | 45.0% | |
| TGACCAACTTGCGCATAACT+AGG | + | chr7_2:10640269-10640288 | None:intergenic | 45.0% | |
| !! | TATGCGCAAGTTGGTCATAC+TGG | - | chr7_2:10640272-10640291 | Msa1048750:CDS | 45.0% |
| CAGAGTGCAGACCCATATGT+AGG | + | chr7_2:10640142-10640161 | None:intergenic | 50.0% | |
| CTGCGGGTGATTGTAACCAT+CGG | + | chr7_2:10640174-10640193 | None:intergenic | 50.0% | |
| GCACCTAGTTATGCGCAAGT+TGG | - | chr7_2:10640263-10640282 | Msa1048750:CDS | 50.0% | |
| ACTTGTCCAGGTGCAGACTG+CGG | + | chr7_2:10640191-10640210 | None:intergenic | 55.0% | |
| GGCTGGGCATAAACTTGTCC+AGG | + | chr7_2:10640203-10640222 | None:intergenic | 55.0% | |
| GGACAAGTTTATGCCCAGCC+TGG | - | chr7_2:10640203-10640222 | Msa1048750:CDS | 55.0% | |
| CAAGTTTATGCCCAGCCTGG+TGG | - | chr7_2:10640206-10640225 | Msa1048750:CDS | 55.0% | |
| ! | CTGGTGGACAACCCGGTTAT+GGG | - | chr7_2:10640222-10640241 | Msa1048750:CDS | 55.0% |
| CACTCTGCACTAGCTGCCGA+TGG | - | chr7_2:10640155-10640174 | Msa1048750:CDS | 60.0% | |
| AATCACCCGCAGTCTGCACC+TGG | - | chr7_2:10640182-10640201 | Msa1048750:CDS | 60.0% | |
| CTTGTCCAGGTGCAGACTGC+GGG | + | chr7_2:10640190-10640209 | None:intergenic | 60.0% | |
| CCATAACCGGGTTGTCCACC+AGG | + | chr7_2:10640224-10640243 | None:intergenic | 60.0% | |
| ! | CCTGGTGGACAACCCGGTTA+TGG | - | chr7_2:10640221-10640240 | Msa1048750:CDS | 60.0% |
| CAACCCGGTTATGGGCAACC+AGG | - | chr7_2:10640230-10640249 | Msa1048750:CDS | 60.0% | |
| GCACCTGGTTGCCCATAACC+GGG | + | chr7_2:10640236-10640255 | None:intergenic | 60.0% | |
| GGCACCTGGTTGCCCATAAC+CGG | + | chr7_2:10640237-10640256 | None:intergenic | 60.0% | |
| TTATGGGCAACCAGGTGCCC+AGG | - | chr7_2:10640238-10640257 | Msa1048750:CDS | 60.0% | |
| CGCATAACTAGGTGCGGCCT+GGG | + | chr7_2:10640258-10640277 | None:intergenic | 60.0% | |
| ACCGGGTTGTCCACCAGGCT+GGG | + | chr7_2:10640219-10640238 | None:intergenic | 65.0% | |
| AACCGGGTTGTCCACCAGGC+TGG | + | chr7_2:10640220-10640239 | None:intergenic | 65.0% | |
| GCGCATAACTAGGTGCGGCC+TGG | + | chr7_2:10640259-10640278 | None:intergenic | 65.0% | |
| ! | GCCCAGCCTGGTGGACAACC+CGG | - | chr7_2:10640215-10640234 | Msa1048750:CDS | 70.0% |
| CTAGGTGCGGCCTGGGCACC+TGG | + | chr7_2:10640251-10640270 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 10640080 | 10640307 | 10640080 | ID=Msa1048750;Name=Msa1048750 |
| chr7_2 | mRNA | 10640080 | 10640307 | 10640080 | ID=Msa1048750-mRNA-1;Parent=Msa1048750;Name=Msa1048750-mRNA-1;_AED=0.47;_eAED=0.65;_QI=0|-1|0|1|-1|1|1|0|75 |
| chr7_2 | exon | 10640080 | 10640307 | 10640080 | ID=Msa1048750-mRNA-1:exon:2816;Parent=Msa1048750-mRNA-1 |
| chr7_2 | CDS | 10640080 | 10640307 | 10640080 | ID=Msa1048750-mRNA-1:cds;Parent=Msa1048750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
