Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838870 | RHN54425.1 | 96.503 | 572 | 18 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838870 | sp|F4HUK6|AAE1_ARATH | 46.703 | 546 | 273 | 8 | 29 | 565 | 9 | 545 | 2.30e-174 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838870 | A0A396HSQ5 | 96.503 | 572 | 18 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1135 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014280 | Msa0838870 | 0.823408 | 1.407286e-53 | -8.615850e-47 |
| Msa0022470 | Msa0838870 | 0.824806 | 6.611563e-54 | -8.615850e-47 |
| Msa0026420 | Msa0838870 | 0.826573 | 2.518639e-54 | -8.615850e-47 |
| Msa0030800 | Msa0838870 | 0.802443 | 5.596583e-49 | -8.615850e-47 |
| Msa0031410 | Msa0838870 | 0.813090 | 3.052417e-51 | -8.615850e-47 |
| Msa0034540 | Msa0838870 | 0.803657 | 3.140490e-49 | -8.615850e-47 |
| Msa0043740 | Msa0838870 | 0.802090 | 6.615178e-49 | -8.615850e-47 |
| Msa0052580 | Msa0838870 | 0.801114 | 1.048800e-48 | -8.615850e-47 |
| Msa0070120 | Msa0838870 | 0.819415 | 1.175795e-52 | -8.615850e-47 |
| Msa0086360 | Msa0838870 | 0.821882 | 3.188233e-53 | -8.615850e-47 |
| Msa0090090 | Msa0838870 | 0.811149 | 8.089775e-51 | -8.615850e-47 |
| Msa0090380 | Msa0838870 | 0.801475 | 8.848160e-49 | -8.615850e-47 |
| Msa0092970 | Msa0838870 | 0.849850 | 2.480692e-60 | -8.615850e-47 |
| Msa0104070 | Msa0838870 | 0.800773 | 1.231276e-48 | -8.615850e-47 |
| Msa0107830 | Msa0838870 | 0.840538 | 8.188027e-58 | -8.615850e-47 |
| Msa0118010 | Msa0838870 | 0.857288 | 1.807929e-62 | -8.615850e-47 |
| Msa0610580 | Msa0838870 | 0.824175 | 9.308292e-54 | -8.615850e-47 |
| Msa0614960 | Msa0838870 | 0.803084 | 4.126901e-49 | -8.615850e-47 |
| Msa0615200 | Msa0838870 | 0.803760 | 2.988963e-49 | -8.615850e-47 |
| Msa0615210 | Msa0838870 | 0.814493 | 1.497946e-51 | -8.615850e-47 |
| Msa0619030 | Msa0838870 | -0.803983 | 2.687010e-49 | -8.615850e-47 |
| Msa0631130 | Msa0838870 | 0.847655 | 1.007861e-59 | -8.615850e-47 |
| Msa0637590 | Msa0838870 | 0.834014 | 3.827492e-56 | -8.615850e-47 |
| Msa0637700 | Msa0838870 | 0.800442 | 1.438360e-48 | -8.615850e-47 |
| Msa0650560 | Msa0838870 | 0.809988 | 1.441550e-50 | -8.615850e-47 |
| Msa0651170 | Msa0838870 | 0.819628 | 1.051280e-52 | -8.615850e-47 |
| Msa0652590 | Msa0838870 | 0.866242 | 3.290519e-65 | -8.615850e-47 |
| Msa0658190 | Msa0838870 | 0.801892 | 7.266755e-49 | -8.615850e-47 |
| Msa0662460 | Msa0838870 | 0.856411 | 3.275783e-62 | -8.615850e-47 |
| Msa0662580 | Msa0838870 | 0.804534 | 2.063317e-49 | -8.615850e-47 |
| Msa0669350 | Msa0838870 | 0.841794 | 3.828497e-58 | -8.615850e-47 |
| Msa0670170 | Msa0838870 | 0.815668 | 8.217763e-52 | -8.615850e-47 |
| Msa0676860 | Msa0838870 | 0.819459 | 1.148941e-52 | -8.615850e-47 |
| Msa0693240 | Msa0838870 | 0.823717 | 1.192072e-53 | -8.615850e-47 |
| Msa0694320 | Msa0838870 | 0.844114 | 9.235140e-59 | -8.615850e-47 |
| Msa0699170 | Msa0838870 | 0.824693 | 7.030296e-54 | -8.615850e-47 |
| Msa0703030 | Msa0838870 | 0.825004 | 5.935549e-54 | -8.615850e-47 |
| Msa0704560 | Msa0838870 | 0.849400 | 3.314011e-60 | -8.615850e-47 |
| Msa0709140 | Msa0838870 | 0.801326 | 9.491593e-49 | -8.615850e-47 |
| Msa0717860 | Msa0838870 | 0.926514 | 4.224697e-91 | -8.615850e-47 |
| Msa0723770 | Msa0838870 | 0.853229 | 2.742781e-61 | -8.615850e-47 |
| Msa0731580 | Msa0838870 | 0.822978 | 1.774027e-53 | -8.615850e-47 |
| Msa0740630 | Msa0838870 | 0.808833 | 2.549672e-50 | -8.615850e-47 |
| Msa0744710 | Msa0838870 | 0.810275 | 1.250137e-50 | -8.615850e-47 |
| Msa0745160 | Msa0838870 | 0.847858 | 8.863869e-60 | -8.615850e-47 |
| Msa0745730 | Msa0838870 | 0.807029 | 6.171561e-50 | -8.615850e-47 |
| Msa0750830 | Msa0838870 | 0.800186 | 1.621934e-48 | -8.615850e-47 |
| Msa0753930 | Msa0838870 | 0.880818 | 4.012676e-70 | -8.615850e-47 |
| Msa0758520 | Msa0838870 | 0.982794 | 5.118348e-156 | -8.615850e-47 |
| Msa0758570 | Msa0838870 | 0.982814 | 4.530004e-156 | -8.615850e-47 |
| Msa0765140 | Msa0838870 | 0.853925 | 1.730942e-61 | -8.615850e-47 |
| Msa0794200 | Msa0838870 | 0.802845 | 4.624407e-49 | -8.615850e-47 |
| Msa0795320 | Msa0838870 | 0.808404 | 3.148460e-50 | -8.615850e-47 |
| Msa0804870 | Msa0838870 | 0.865227 | 6.879427e-65 | -8.615850e-47 |
| Msa0807020 | Msa0838870 | 0.833123 | 6.389632e-56 | -8.615850e-47 |
| Msa0809920 | Msa0838870 | 0.812219 | 4.732674e-51 | -8.615850e-47 |
| Msa0817190 | Msa0838870 | 0.856698 | 2.698339e-62 | -8.615850e-47 |
| Msa0820880 | Msa0838870 | 0.813599 | 2.358931e-51 | -8.615850e-47 |
| Msa0826240 | Msa0838870 | 0.813287 | 2.762866e-51 | -8.615850e-47 |
| Msa0829050 | Msa0838870 | 0.822272 | 2.589200e-53 | -8.615850e-47 |
| Msa0832950 | Msa0838870 | 0.877216 | 7.508596e-69 | -8.615850e-47 |
| Msa0838870 | Msa0840780 | 0.856205 | 3.766334e-62 | -8.615850e-47 |
| Msa0838870 | Msa0843950 | 0.819807 | 9.568345e-53 | -8.615850e-47 |
| Msa0838870 | Msa0859040 | 0.821499 | 3.909411e-53 | -8.615850e-47 |
| Msa0838870 | Msa0865430 | 0.831356 | 1.748819e-55 | -8.615850e-47 |
| Msa0838870 | Msa0867610 | 0.850934 | 1.231754e-60 | -8.615850e-47 |
| Msa0838870 | Msa0874750 | 0.814621 | 1.403755e-51 | -8.615850e-47 |
| Msa0838870 | Msa0895620 | 0.802527 | 5.377071e-49 | -8.615850e-47 |
| Msa0838870 | Msa0921790 | 0.804106 | 2.533157e-49 | -8.615850e-47 |
| Msa0838870 | Msa0925940 | 0.816944 | 4.258380e-52 | -8.615850e-47 |
| Msa0838870 | Msa1003920 | 0.810110 | 1.356580e-50 | -8.615850e-47 |
| Msa0838870 | Msa1016100 | 0.852409 | 4.705122e-61 | -8.615850e-47 |
| Msa0838870 | Msa1026890 | 0.819797 | 9.616841e-53 | -8.615850e-47 |
| Msa0838870 | Msa1027910 | 0.872544 | 2.931365e-67 | -8.615850e-47 |
| Msa0838870 | Msa1030200 | 0.846150 | 2.602153e-59 | -8.615850e-47 |
| Msa0838870 | Msa1030210 | 0.882877 | 7.201474e-71 | -8.615850e-47 |
| Msa0838870 | Msa1030240 | 0.857832 | 1.247291e-62 | -8.615850e-47 |
| Msa0838870 | Msa1035050 | 0.844137 | 9.106203e-59 | -8.615850e-47 |
| Msa0838870 | Msa1057400 | 0.830657 | 2.595232e-55 | -8.615850e-47 |
| Msa0838870 | Msa1058140 | 0.807143 | 5.835843e-50 | -8.615850e-47 |
| Msa0838870 | Msa1059710 | 0.843155 | 1.667314e-58 | -8.615850e-47 |
| Msa0838870 | Msa1069250 | 0.880573 | 4.911695e-70 | -8.615850e-47 |
| Msa0838870 | Msa1071350 | 0.815998 | 6.933903e-52 | -8.615850e-47 |
| Msa0838870 | Msa1075090 | 0.828397 | 9.195529e-55 | -8.615850e-47 |
| Msa0838870 | Msa1077970 | 0.825661 | 4.150503e-54 | -8.615850e-47 |
| Msa0838870 | Msa1084890 | 0.894301 | 2.805274e-75 | -8.615850e-47 |
| Msa0838870 | Msa1095590 | 0.846824 | 1.703617e-59 | -8.615850e-47 |
| Msa0838870 | Msa1102210 | 0.857282 | 1.815155e-62 | -8.615850e-47 |
| Msa0838870 | Msa1110900 | 0.821182 | 4.624514e-53 | -8.615850e-47 |
| Msa0838870 | Msa1114670 | 0.813948 | 1.976945e-51 | -8.615850e-47 |
| Msa0838870 | Msa1115980 | 0.817305 | 3.532244e-52 | -8.615850e-47 |
| Msa0838870 | Msa1120580 | 0.887113 | 1.897698e-72 | -8.615850e-47 |
| Msa0838870 | Msa1120960 | 0.805776 | 1.133872e-49 | -8.615850e-47 |
| Msa0838870 | Msa1131120 | 0.807018 | 6.203245e-50 | -8.615850e-47 |
| Msa0838870 | Msa1132980 | 0.845503 | 3.898683e-59 | -8.615850e-47 |
| Msa0838870 | Msa1136630 | 0.821204 | 4.572987e-53 | -8.615850e-47 |
| Msa0838870 | Msa1136690 | 0.801417 | 9.091826e-49 | -8.615850e-47 |
| Msa0838870 | Msa1136760 | 0.865614 | 5.196896e-65 | -8.615850e-47 |
| Msa0838870 | Msa1142390 | 0.813109 | 3.022756e-51 | -8.615850e-47 |
| Msa0838870 | Msa1157110 | 0.878031 | 3.901562e-69 | -8.615850e-47 |
| Msa0838870 | Msa1157670 | 0.801124 | 1.044163e-48 | -8.615850e-47 |
| Msa0838870 | Msa1174280 | 0.822890 | 1.859309e-53 | -8.615850e-47 |
| Msa0838870 | Msa1180430 | 0.851012 | 1.170718e-60 | -8.615850e-47 |
| Msa0838870 | Msa1186150 | 0.831969 | 1.235041e-55 | -8.615850e-47 |
| Msa0838870 | Msa1187490 | 0.822519 | 2.268449e-53 | -8.615850e-47 |
| Msa0838870 | Msa1202110 | 0.818376 | 2.024103e-52 | -8.615850e-47 |
| Msa0838870 | Msa1203810 | 0.819788 | 9.664181e-53 | -8.615850e-47 |
| Msa0838870 | Msa1211610 | 0.839429 | 1.593314e-57 | -8.615850e-47 |
| Msa0838870 | Msa1231980 | 0.845040 | 5.204001e-59 | -8.615850e-47 |
| Msa0838870 | Msa1254870 | 0.817308 | 3.526553e-52 | -8.615850e-47 |
| Msa0838870 | Msa1256060 | 0.810973 | 8.829582e-51 | -8.615850e-47 |
| Msa0838870 | Msa1262540 | 0.816029 | 6.825301e-52 | -8.615850e-47 |
| Msa0838870 | Msa1280960 | 0.850900 | 1.258674e-60 | -8.615850e-47 |
| Msa0838870 | Msa1296240 | 0.830733 | 2.486369e-55 | -8.615850e-47 |
| Msa0838870 | Msa1299480 | 0.826678 | 2.378348e-54 | -8.615850e-47 |
| Msa0838870 | Msa1303400 | 0.812399 | 4.323702e-51 | -8.615850e-47 |
| Msa0838870 | Msa1307530 | 0.803597 | 3.230665e-49 | -8.615850e-47 |
| Msa0838870 | Msa1320160 | 0.829278 | 5.629348e-55 | -8.615850e-47 |
| Msa0838870 | Msa1328430 | 0.817724 | 2.843373e-52 | -8.615850e-47 |
| Msa0838870 | Msa1356130 | 0.850881 | 1.274568e-60 | -8.615850e-47 |
| Msa0838870 | Msa1390200 | 0.810032 | 1.409854e-50 | -8.615850e-47 |
| Msa0838870 | Msa1395110 | 0.825488 | 4.560836e-54 | -8.615850e-47 |
| Msa0838870 | Msa1395250 | 0.872226 | 3.742757e-67 | -8.615850e-47 |
| Msa0838870 | Msa1398140 | 0.859839 | 3.132140e-63 | -8.615850e-47 |
| Msa0838870 | Msa1405500 | 0.830199 | 3.359209e-55 | -8.615850e-47 |
| Msa0838870 | Msa1413800 | 0.831998 | 1.214413e-55 | -8.615850e-47 |
| Msa0838870 | Msa1427000 | 0.841223 | 5.411412e-58 | -8.615850e-47 |
| Msa0838870 | Msa1432850 | 0.800801 | 1.215073e-48 | -8.615850e-47 |
| Msa0838870 | Msa1435320 | 0.869580 | 2.783215e-66 | -8.615850e-47 |
| Msa0838870 | Msa1436090 | 0.831717 | 1.425281e-55 | -8.615850e-47 |
| Msa0838870 | Msa1438160 | 0.811542 | 6.647332e-51 | -8.615850e-47 |
| Msa0838870 | Msa1439780 | 0.848790 | 4.894937e-60 | -8.615850e-47 |
| Msa0838870 | Msa1443400 | 0.869578 | 2.787928e-66 | -8.615850e-47 |
| Msa0838870 | Msa1447870 | 0.823047 | 1.709333e-53 | -8.615850e-47 |
| Msa0838870 | Msa1447880 | 0.823771 | 1.157364e-53 | -8.615850e-47 |
| Msa0838870 | Msa1448040 | 0.869203 | 3.691245e-66 | -8.615850e-47 |
| Msa0838870 | Msa1455200 | 0.850187 | 1.996329e-60 | -8.615850e-47 |
| Msa0838870 | Msa1456000 | 0.808813 | 2.575470e-50 | -8.615850e-47 |
| Msa0126430 | Msa0838870 | 0.847087 | 1.443729e-59 | -8.615850e-47 |
| Msa0129770 | Msa0838870 | 0.856790 | 2.535486e-62 | -8.615850e-47 |
| Msa0137560 | Msa0838870 | 0.817356 | 3.440460e-52 | -8.615850e-47 |
| Msa0137860 | Msa0838870 | 0.800776 | 1.229850e-48 | -8.615850e-47 |
| Msa0139680 | Msa0838870 | 0.804048 | 2.603932e-49 | -8.615850e-47 |
| Msa0143640 | Msa0838870 | 0.835394 | 1.721496e-56 | -8.615850e-47 |
| Msa0150620 | Msa0838870 | 0.851489 | 8.586580e-61 | -8.615850e-47 |
| Msa0161560 | Msa0838870 | 0.856843 | 2.446264e-62 | -8.615850e-47 |
| Msa0162680 | Msa0838870 | 0.829823 | 4.148308e-55 | -8.615850e-47 |
| Msa0164250 | Msa0838870 | 0.842745 | 2.143056e-58 | -8.615850e-47 |
| Msa0185040 | Msa0838870 | 0.827882 | 1.223694e-54 | -8.615850e-47 |
| Msa0185100 | Msa0838870 | 0.862899 | 3.653425e-64 | -8.615850e-47 |
| Msa0186240 | Msa0838870 | 0.836391 | 9.616222e-57 | -8.615850e-47 |
| Msa0193190 | Msa0838870 | 0.873033 | 2.010869e-67 | -8.615850e-47 |
| Msa0193950 | Msa0838870 | 0.800916 | 1.151313e-48 | -8.615850e-47 |
| Msa0204170 | Msa0838870 | 0.826042 | 3.370006e-54 | -8.615850e-47 |
| Msa0218090 | Msa0838870 | 0.863936 | 1.743320e-64 | -8.615850e-47 |
| Msa0234740 | Msa0838870 | 0.841459 | 4.691910e-58 | -8.615850e-47 |
| Msa0367860 | Msa0838870 | 0.818604 | 1.797652e-52 | -8.615850e-47 |
| Msa0383900 | Msa0838870 | 0.851024 | 1.161492e-60 | -8.615850e-47 |
| Msa0387040 | Msa0838870 | 0.807690 | 4.468654e-50 | -8.615850e-47 |
| Msa0388070 | Msa0838870 | 0.814373 | 1.592423e-51 | -8.615850e-47 |
| Msa0390200 | Msa0838870 | 0.842102 | 3.173585e-58 | -8.615850e-47 |
| Msa0393100 | Msa0838870 | 0.854630 | 1.082743e-61 | -8.615850e-47 |
| Msa0397180 | Msa0838870 | 0.827975 | 1.162172e-54 | -8.615850e-47 |
| Msa0397200 | Msa0838870 | 0.813123 | 3.001116e-51 | -8.615850e-47 |
| Msa0400010 | Msa0838870 | 0.800910 | 1.154538e-48 | -8.615850e-47 |
| Msa0405210 | Msa0838870 | 0.823559 | 1.297606e-53 | -8.615850e-47 |
| Msa0415640 | Msa0838870 | 0.812628 | 3.853479e-51 | -8.615850e-47 |
| Msa0422740 | Msa0838870 | 0.800073 | 1.710018e-48 | -8.615850e-47 |
| Msa0427660 | Msa0838870 | 0.805314 | 1.417490e-49 | -8.615850e-47 |
| Msa0434300 | Msa0838870 | 0.845110 | 4.980258e-59 | -8.615850e-47 |
| Msa0434400 | Msa0838870 | 0.857842 | 1.239375e-62 | -8.615850e-47 |
| Msa0441260 | Msa0838870 | 0.803650 | 3.150671e-49 | -8.615850e-47 |
| Msa0443450 | Msa0838870 | 0.810433 | 1.155690e-50 | -8.615850e-47 |
| Msa0449490 | Msa0838870 | 0.823128 | 1.636552e-53 | -8.615850e-47 |
| Msa0460600 | Msa0838870 | 0.855881 | 4.683102e-62 | -8.615850e-47 |
| Msa0476770 | Msa0838870 | 0.841810 | 3.790463e-58 | -8.615850e-47 |
| Msa0478080 | Msa0838870 | 0.822948 | 1.802118e-53 | -8.615850e-47 |
| Msa0247470 | Msa0838870 | 0.837474 | 5.087530e-57 | -8.615850e-47 |
| Msa0253960 | Msa0838870 | 0.831507 | 1.604894e-55 | -8.615850e-47 |
| Msa0257760 | Msa0838870 | 0.834821 | 2.400570e-56 | -8.615850e-47 |
| Msa0257900 | Msa0838870 | 0.829249 | 5.721395e-55 | -8.615850e-47 |
| Msa0259930 | Msa0838870 | 0.801813 | 7.542802e-49 | -8.615850e-47 |
| Msa0260050 | Msa0838870 | 0.801301 | 9.606178e-49 | -8.615850e-47 |
| Msa0267900 | Msa0838870 | 0.807231 | 5.591344e-50 | -8.615850e-47 |
| Msa0271700 | Msa0838870 | 0.823389 | 1.422204e-53 | -8.615850e-47 |
| Msa0271720 | Msa0838870 | 0.827466 | 1.540159e-54 | -8.615850e-47 |
| Msa0273070 | Msa0838870 | 0.874042 | 9.197666e-68 | -8.615850e-47 |
| Msa0275730 | Msa0838870 | 0.830594 | 2.689943e-55 | -8.615850e-47 |
| Msa0296900 | Msa0838870 | 0.827508 | 1.505263e-54 | -8.615850e-47 |
| Msa0296910 | Msa0838870 | 0.822120 | 2.807818e-53 | -8.615850e-47 |
| Msa0306310 | Msa0838870 | 0.875040 | 4.214239e-68 | -8.615850e-47 |
| Msa0319680 | Msa0838870 | 0.811014 | 8.653235e-51 | -8.615850e-47 |
| Msa0320170 | Msa0838870 | 0.801143 | 1.034657e-48 | -8.615850e-47 |
| Msa0324840 | Msa0838870 | 0.816240 | 6.124781e-52 | -8.615850e-47 |
| Msa0335070 | Msa0838870 | 0.830770 | 2.436068e-55 | -8.615850e-47 |
| Msa0335080 | Msa0838870 | 0.845266 | 4.520439e-59 | -8.615850e-47 |
| Msa0345050 | Msa0838870 | 0.803845 | 2.870128e-49 | -8.615850e-47 |
| Msa0345890 | Msa0838870 | 0.871396 | 7.054511e-67 | -8.615850e-47 |
| Msa0345980 | Msa0838870 | 0.852816 | 3.600629e-61 | -8.615850e-47 |
| Msa0488580 | Msa0838870 | 0.843884 | 1.064743e-58 | -8.615850e-47 |
| Msa0488660 | Msa0838870 | 0.826256 | 2.998221e-54 | -8.615850e-47 |
| Msa0493870 | Msa0838870 | 0.811265 | 7.631925e-51 | -8.615850e-47 |
| Msa0497120 | Msa0838870 | 0.829828 | 4.138003e-55 | -8.615850e-47 |
| Msa0497690 | Msa0838870 | 0.853160 | 2.871368e-61 | -8.615850e-47 |
| Msa0510870 | Msa0838870 | 0.812950 | 3.275940e-51 | -8.615850e-47 |
| Msa0522140 | Msa0838870 | 0.841121 | 5.759049e-58 | -8.615850e-47 |
| Msa0522170 | Msa0838870 | 0.842881 | 1.972151e-58 | -8.615850e-47 |
| Msa0534270 | Msa0838870 | 0.823673 | 1.220242e-53 | -8.615850e-47 |
| Msa0534610 | Msa0838870 | 0.847676 | 9.943913e-60 | -8.615850e-47 |
| Msa0536540 | Msa0838870 | 0.820729 | 5.881596e-53 | -8.615850e-47 |
| Msa0556270 | Msa0838870 | 0.850514 | 1.616988e-60 | -8.615850e-47 |
| Msa0557240 | Msa0838870 | 0.873459 | 1.446421e-67 | -8.615850e-47 |
| Msa0561830 | Msa0838870 | 0.802749 | 4.839920e-49 | -8.615850e-47 |
| Msa0565120 | Msa0838870 | 0.803689 | 3.091600e-49 | -8.615850e-47 |
| Msa0565180 | Msa0838870 | 0.800467 | 1.421788e-48 | -8.615850e-47 |
| Msa0566530 | Msa0838870 | 0.853956 | 1.695813e-61 | -8.615850e-47 |
| Msa0578960 | Msa0838870 | 0.820075 | 8.307736e-53 | -8.615850e-47 |
| Msa0580840 | Msa0838870 | 0.825008 | 5.925070e-54 | -8.615850e-47 |
| Msa0590390 | Msa0838870 | 0.800240 | 1.581333e-48 | -8.615850e-47 |
| Msa0590810 | Msa0838870 | 0.850039 | 2.197474e-60 | -8.615850e-47 |
| Msa0592650 | Msa0838870 | 0.816871 | 4.423314e-52 | -8.615850e-47 |
| Msa0592660 | Msa0838870 | 0.858715 | 6.811521e-63 | -8.615850e-47 |
| Msa0594250 | Msa0838870 | 0.818165 | 2.259603e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838870 | MtrunA17_Chr5g0406681 | 96.503 | 572 | 18 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1135 |
| Msa0838870 | MtrunA17_Chr5g0396311 | 48.270 | 549 | 269 | 9 | 23 | 566 | 2 | 540 | 0.0 | 521 |
| Msa0838870 | MtrunA17_Chr5g0396331 | 46.789 | 545 | 275 | 8 | 26 | 566 | 5 | 538 | 6.82e-176 | 508 |
| Msa0838870 | MtrunA17_Chr8g0370701 | 47.187 | 551 | 274 | 9 | 23 | 566 | 44 | 584 | 5.13e-174 | 506 |
| Msa0838870 | MtrunA17_Chr4g0068151 | 42.171 | 562 | 300 | 10 | 23 | 566 | 5 | 559 | 1.22e-149 | 442 |
| Msa0838870 | MtrunA17_Chr8g0370731 | 47.510 | 482 | 242 | 6 | 90 | 566 | 20 | 495 | 2.27e-149 | 439 |
| Msa0838870 | MtrunA17_Chr2g0301671 | 40.636 | 566 | 311 | 10 | 19 | 566 | 1 | 559 | 9.41e-147 | 434 |
| Msa0838870 | MtrunA17_Chr5g0433241 | 41.187 | 556 | 305 | 11 | 24 | 566 | 2 | 548 | 1.37e-144 | 429 |
| Msa0838870 | MtrunA17_Chr3g0109731 | 40.860 | 558 | 303 | 11 | 24 | 563 | 3 | 551 | 1.77e-139 | 416 |
| Msa0838870 | MtrunA17_Chr5g0433231 | 42.908 | 557 | 295 | 12 | 24 | 566 | 2 | 549 | 1.77e-135 | 405 |
| Msa0838870 | MtrunA17_Chr5g0433221 | 42.936 | 545 | 288 | 12 | 36 | 566 | 14 | 549 | 3.68e-131 | 394 |
| Msa0838870 | MtrunA17_Chr6g0471311 | 42.960 | 554 | 291 | 11 | 29 | 566 | 7 | 551 | 9.50e-131 | 394 |
| Msa0838870 | MtrunA17_Chr5g0395431 | 25.540 | 556 | 354 | 20 | 32 | 564 | 67 | 585 | 1.20e-32 | 132 |
| Msa0838870 | MtrunA17_Chr3g0102411 | 25.224 | 559 | 357 | 20 | 28 | 562 | 16 | 537 | 1.64e-32 | 131 |
| Msa0838870 | MtrunA17_Chr1g0157401 | 23.576 | 509 | 348 | 12 | 62 | 555 | 67 | 549 | 1.38e-31 | 129 |
| Msa0838870 | MtrunA17_Chr4g0039791 | 25.933 | 509 | 327 | 16 | 74 | 564 | 83 | 559 | 1.85e-31 | 128 |
| Msa0838870 | MtrunA17_Chr8g0353341 | 26.113 | 494 | 309 | 18 | 62 | 530 | 64 | 526 | 6.30e-30 | 124 |
| Msa0838870 | MtrunA17_Chr2g0327341 | 25.283 | 530 | 358 | 17 | 36 | 555 | 27 | 528 | 2.83e-28 | 119 |
| Msa0838870 | MtrunA17_Chr4g0000461 | 25.131 | 573 | 364 | 21 | 20 | 564 | 5 | 540 | 8.84e-28 | 117 |
| Msa0838870 | MtrunA17_Chr4g0028411 | 24.248 | 532 | 364 | 17 | 36 | 555 | 27 | 531 | 1.72e-27 | 116 |
| Msa0838870 | MtrunA17_Chr5g0409791 | 25.676 | 518 | 327 | 18 | 74 | 564 | 80 | 566 | 2.02e-27 | 116 |
| Msa0838870 | MtrunA17_Chr1g0180541 | 23.881 | 536 | 366 | 16 | 36 | 555 | 28 | 537 | 1.86e-25 | 110 |
| Msa0838870 | MtrunA17_Chr5g0409771 | 26.275 | 510 | 322 | 22 | 74 | 564 | 79 | 553 | 1.65e-24 | 107 |
| Msa0838870 | MtrunA17_Chr4g0072561 | 22.928 | 567 | 376 | 18 | 10 | 553 | 7 | 535 | 7.93e-24 | 105 |
| Msa0838870 | MtrunA17_Chr1g0180551 | 24.176 | 546 | 356 | 20 | 36 | 555 | 97 | 610 | 3.56e-23 | 103 |
| Msa0838870 | MtrunA17_Chr1g0197391 | 24.663 | 519 | 328 | 19 | 58 | 555 | 79 | 555 | 7.90e-23 | 102 |
| Msa0838870 | MtrunA17_Chr6g0471921 | 21.978 | 546 | 362 | 14 | 41 | 564 | 10 | 513 | 2.68e-21 | 97.4 |
| Msa0838870 | MtrunA17_Chr2g0292471 | 23.818 | 592 | 338 | 22 | 42 | 564 | 8 | 555 | 5.27e-21 | 97.1 |
| Msa0838870 | MtrunA17_Chr3g0116251 | 23.370 | 368 | 245 | 12 | 204 | 555 | 199 | 545 | 2.50e-18 | 88.6 |
| Msa0838870 | MtrunA17_Chr4g0034181 | 21.926 | 488 | 304 | 17 | 64 | 492 | 79 | 548 | 3.77e-17 | 85.1 |
| Msa0838870 | MtrunA17_Chr1g0186071 | 24.063 | 507 | 329 | 16 | 62 | 555 | 82 | 545 | 1.00e-16 | 83.6 |
| Msa0838870 | MtrunA17_Chr3g0116271 | 22.642 | 371 | 247 | 12 | 204 | 555 | 198 | 547 | 3.21e-16 | 82.0 |
| Msa0838870 | MtrunA17_Chr2g0334131 | 29.104 | 268 | 173 | 9 | 303 | 564 | 26 | 282 | 7.78e-16 | 78.2 |
| Msa0838870 | MtrunA17_Chr5g0396711 | 23.092 | 511 | 293 | 20 | 55 | 492 | 68 | 551 | 1.21e-14 | 77.0 |
| Msa0838870 | MtrunA17_Chr8g0388081 | 23.576 | 509 | 295 | 21 | 54 | 492 | 6 | 490 | 1.39e-14 | 76.6 |
| Msa0838870 | MtrunA17_Chr5g0396691 | 24.466 | 515 | 281 | 23 | 55 | 492 | 68 | 551 | 5.76e-14 | 75.1 |
| Msa0838870 | MtrunA17_Chr7g0252691 | 25.393 | 382 | 236 | 14 | 207 | 560 | 361 | 721 | 6.58e-14 | 75.1 |
| Msa0838870 | MtrunA17_Chr1g0194371 | 33.793 | 145 | 86 | 4 | 349 | 492 | 415 | 550 | 8.17e-14 | 74.3 |
| Msa0838870 | MtrunA17_Chr7g0270221 | 27.551 | 196 | 130 | 4 | 300 | 492 | 324 | 510 | 1.00e-13 | 74.3 |
| Msa0838870 | MtrunA17_Chr1g0157431 | 23.864 | 264 | 181 | 6 | 62 | 317 | 67 | 318 | 1.40e-12 | 70.5 |
| Msa0838870 | MtrunA17_Chr1g0162621 | 28.481 | 158 | 91 | 6 | 342 | 492 | 408 | 550 | 1.74e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0838870 | AT1G20560.1 | 46.703 | 546 | 273 | 8 | 29 | 565 | 9 | 545 | 2.34e-175 | 508 |
| Msa0838870 | AT2G17650.1 | 46.461 | 551 | 267 | 10 | 35 | 566 | 60 | 601 | 2.43e-162 | 476 |
| Msa0838870 | AT5G16340.1 | 41.727 | 556 | 300 | 10 | 23 | 566 | 2 | 545 | 1.75e-144 | 429 |
| Msa0838870 | AT1G76290.1 | 42.572 | 552 | 296 | 11 | 23 | 567 | 2 | 539 | 3.26e-143 | 425 |
| Msa0838870 | AT3G16910.1 | 41.273 | 550 | 295 | 10 | 36 | 566 | 22 | 562 | 6.05e-143 | 425 |
| Msa0838870 | AT5G16370.1 | 41.367 | 556 | 302 | 10 | 23 | 566 | 2 | 545 | 3.36e-142 | 423 |
| Msa0838870 | AT1G20560.2 | 45.243 | 473 | 242 | 7 | 102 | 565 | 3 | 467 | 8.34e-142 | 419 |
| Msa0838870 | AT1G66120.1 | 41.622 | 555 | 302 | 13 | 24 | 565 | 3 | 548 | 4.17e-139 | 416 |
| Msa0838870 | AT1G75960.1 | 41.273 | 550 | 298 | 10 | 29 | 565 | 7 | 544 | 9.28e-136 | 406 |
| Msa0838870 | AT1G21540.1 | 40.625 | 544 | 303 | 11 | 35 | 565 | 13 | 549 | 7.16e-134 | 401 |
| Msa0838870 | AT1G21530.2 | 39.706 | 544 | 307 | 11 | 35 | 565 | 13 | 548 | 7.16e-133 | 399 |
| Msa0838870 | AT1G65890.1 | 38.204 | 568 | 325 | 9 | 24 | 572 | 2 | 562 | 1.02e-132 | 399 |
| Msa0838870 | AT1G65880.1 | 38.986 | 572 | 315 | 11 | 24 | 572 | 3 | 563 | 5.87e-132 | 397 |
| Msa0838870 | AT1G21530.1 | 39.706 | 544 | 305 | 12 | 35 | 565 | 13 | 546 | 1.13e-130 | 393 |
| Msa0838870 | AT1G77240.1 | 39.114 | 542 | 309 | 12 | 35 | 565 | 13 | 544 | 3.01e-128 | 387 |
| Msa0838870 | AT1G68270.1 | 35.149 | 569 | 311 | 12 | 24 | 572 | 2 | 532 | 2.23e-106 | 330 |
| Msa0838870 | AT3G21240.1 | 25.483 | 518 | 337 | 18 | 63 | 562 | 64 | 550 | 1.42e-29 | 123 |
| Msa0838870 | AT1G65060.1 | 25.594 | 547 | 359 | 18 | 32 | 564 | 46 | 558 | 8.33e-29 | 121 |
| Msa0838870 | AT5G63380.1 | 28.177 | 362 | 234 | 13 | 204 | 555 | 202 | 547 | 1.50e-27 | 117 |
| Msa0838870 | AT1G20510.1 | 25.224 | 559 | 368 | 19 | 29 | 570 | 19 | 544 | 1.77e-27 | 117 |
| Msa0838870 | AT4G05160.1 | 25.636 | 550 | 348 | 19 | 39 | 564 | 30 | 542 | 2.45e-27 | 116 |
| Msa0838870 | AT3G21240.2 | 26.174 | 447 | 286 | 16 | 63 | 492 | 64 | 483 | 1.87e-26 | 113 |
| Msa0838870 | AT3G21240.3 | 26.174 | 447 | 286 | 16 | 63 | 492 | 64 | 483 | 1.87e-26 | 113 |
| Msa0838870 | AT1G20480.1 | 25.090 | 554 | 353 | 20 | 29 | 555 | 36 | 554 | 1.46e-25 | 111 |
| Msa0838870 | AT1G20500.1 | 26.572 | 493 | 306 | 19 | 82 | 555 | 84 | 539 | 2.77e-25 | 110 |
| Msa0838870 | AT1G51680.1 | 25.912 | 521 | 341 | 19 | 60 | 562 | 64 | 557 | 2.88e-25 | 110 |
| Msa0838870 | AT1G62940.1 | 23.774 | 530 | 343 | 15 | 54 | 565 | 53 | 539 | 3.26e-25 | 110 |
| Msa0838870 | AT1G51680.3 | 26.273 | 491 | 318 | 18 | 60 | 533 | 64 | 527 | 1.03e-24 | 108 |
| Msa0838870 | AT4G19010.1 | 24.206 | 504 | 323 | 20 | 82 | 565 | 93 | 557 | 6.70e-24 | 106 |
| Msa0838870 | AT1G51680.2 | 26.667 | 450 | 290 | 16 | 60 | 492 | 64 | 490 | 3.06e-23 | 103 |
| Msa0838870 | AT5G38120.1 | 25.414 | 543 | 345 | 19 | 45 | 565 | 46 | 550 | 4.05e-23 | 103 |
| Msa0838870 | AT3G21230.1 | 25.179 | 560 | 361 | 19 | 32 | 565 | 40 | 567 | 6.09e-23 | 103 |
| Msa0838870 | AT1G20510.2 | 25.470 | 479 | 316 | 16 | 29 | 491 | 19 | 472 | 9.18e-23 | 102 |
| Msa0838870 | AT1G30520.2 | 24.339 | 567 | 357 | 18 | 42 | 564 | 13 | 551 | 3.45e-22 | 100 |
| Msa0838870 | AT1G30520.1 | 24.339 | 567 | 357 | 18 | 42 | 564 | 13 | 551 | 3.45e-22 | 100 |
| Msa0838870 | AT3G48990.1 | 24.286 | 560 | 328 | 19 | 41 | 562 | 9 | 510 | 9.15e-22 | 99.4 |
| Msa0838870 | AT3G21230.3 | 25.524 | 525 | 334 | 18 | 32 | 531 | 40 | 532 | 1.15e-21 | 99.4 |
| Msa0838870 | AT5G38120.3 | 25.247 | 507 | 321 | 17 | 45 | 531 | 46 | 514 | 1.81e-21 | 98.6 |
| Msa0838870 | AT5G38120.4 | 25.696 | 467 | 293 | 16 | 45 | 491 | 46 | 478 | 1.54e-20 | 95.5 |
| Msa0838870 | AT5G38120.2 | 25.696 | 467 | 293 | 16 | 45 | 491 | 46 | 478 | 1.54e-20 | 95.5 |
| Msa0838870 | AT2G47240.4 | 24.330 | 485 | 298 | 14 | 64 | 492 | 19 | 490 | 2.67e-20 | 95.1 |
| Msa0838870 | AT2G47240.1 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 4.07e-20 | 94.7 |
| Msa0838870 | AT2G47240.2 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 4.07e-20 | 94.7 |
| Msa0838870 | AT2G47240.3 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 4.07e-20 | 94.7 |
| Msa0838870 | AT3G21230.2 | 25.720 | 486 | 308 | 17 | 32 | 492 | 40 | 497 | 1.02e-18 | 89.7 |
| Msa0838870 | AT1G20510.3 | 24.524 | 473 | 309 | 18 | 29 | 478 | 19 | 466 | 6.42e-17 | 84.0 |
| Msa0838870 | AT4G11030.1 | 22.863 | 503 | 291 | 21 | 60 | 492 | 77 | 552 | 5.81e-13 | 72.4 |
Find 121 sgRNAs with CRISPR-Local
Find 373 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAACACTCTTCATTGTATT+TGG | 0.117189 | 5_4:+13410350 | None:intergenic |
| CTGAATTATGTTGATCAAAA+AGG | 0.196037 | 5_4:-13410413 | Msa0838870:CDS |
| AAAAGATATTATTTATTCTA+AGG | 0.210086 | 5_4:-13410159 | Msa0838870:CDS |
| TTCCACTTTCTTACAATAAC+TGG | 0.223827 | 5_4:+13410464 | None:intergenic |
| GCACACTATGAACTTCATTT+TGG | 0.224185 | 5_4:-13411241 | Msa0838870:CDS |
| TGATTATAAACTGCTCCTTT+TGG | 0.243384 | 5_4:+13410875 | None:intergenic |
| AAGAAGTTCATCGTATATTA+AGG | 0.246952 | 5_4:+13410988 | None:intergenic |
| GATCTTGTATTAGGACAATA+AGG | 0.256872 | 5_4:+13411044 | None:intergenic |
| TTGCAAACTGTGACATTATT+AGG | 0.258350 | 5_4:-13410610 | Msa0838870:CDS |
| TCATAGTGTGCTGGAGTATT+TGG | 0.268936 | 5_4:+13411253 | None:intergenic |
| ATAGGTGAAATCATGTTTAA+AGG | 0.270805 | 5_4:-13410311 | Msa0838870:CDS |
| AAGGCGTGGTTTGTAGGATT+TGG | 0.273447 | 5_4:-13409818 | Msa0838870:three_prime_UTR |
| AAAATATTAAGCTAGATATA+TGG | 0.273957 | 5_4:+13409720 | None:intergenic |
| CTTGGATTTGATGTTAATAT+TGG | 0.274603 | 5_4:-13410512 | Msa0838870:CDS |
| ATAGGATCACATTCATTTCT+AGG | 0.276426 | 5_4:+13410932 | None:intergenic |
| GTTGGCCATGATCTTGTATT+AGG | 0.280602 | 5_4:+13411035 | None:intergenic |
| ACACAGTGGCTGCTCGTTCT+AGG | 0.291086 | 5_4:+13415637 | None:intergenic |
| GGGGTGGCTTGAAATTTCTT+TGG | 0.296665 | 5_4:+13411065 | None:intergenic |
| TCACCAAACACCACACTCTT+AGG | 0.297868 | 5_4:+13409927 | None:intergenic |
| TAATAGTCGCGAGTGAATTA+AGG | 0.299417 | 5_4:+13410840 | None:intergenic |
| GTGTGGTGCACCTACCCTTC+TGG | 0.311889 | 5_4:-13410639 | Msa0838870:CDS |
| ATAAATAAAACAAGGCAAAA+TGG | 0.314247 | 5_4:-13409565 | Msa0838870:three_prime_UTR |
| GGTAACGTCCTCACTGGTTC+TGG | 0.322386 | 5_4:+13415722 | None:intergenic |
| TATCATGCAAACCACTGATT+TGG | 0.322638 | 5_4:+13409588 | None:intergenic |
| TCTCAACCTTGCTTCTGCTT+TGG | 0.326179 | 5_4:-13415544 | Msa0838870:CDS |
| TAATTAGATTAGAGATTAAA+TGG | 0.328684 | 5_4:+13409661 | None:intergenic |
| AGAGAAAATATTAAAAGTAT+TGG | 0.343101 | 5_4:-13409861 | Msa0838870:CDS |
| GAGAAAATATTAAAAGTATT+GGG | 0.347029 | 5_4:-13409860 | Msa0838870:CDS |
| AACTACACATCAGGCTCAAC+TGG | 0.349825 | 5_4:-13410902 | Msa0838870:CDS |
| AACAACATTAGCATTAATAT+TGG | 0.350853 | 5_4:-13411167 | Msa0838870:CDS |
| TGGTGTGACTCAATTAATTA+AGG | 0.354471 | 5_4:-13409837 | Msa0838870:exon |
| TGAGTTTGTGAGTTCATTAG+AGG | 0.375347 | 5_4:-13410135 | Msa0838870:CDS |
| GGGTGGCTTGAAATTTCTTT+GGG | 0.377898 | 5_4:+13411066 | None:intergenic |
| GAGGTATATCTTTCACTAGT+TGG | 0.380173 | 5_4:+13411017 | None:intergenic |
| TTAATTAAGGCGTGGTTTGT+AGG | 0.384375 | 5_4:-13409824 | Msa0838870:exon |
| TAGGTGAAATCATGTTTAAA+GGG | 0.386467 | 5_4:-13410310 | Msa0838870:CDS |
| TGAAGCAATTCATGTTCATA+AGG | 0.387735 | 5_4:-13410672 | Msa0838870:CDS |
| TTTGATGTTAATATTGGTTA+TGG | 0.391504 | 5_4:-13410506 | Msa0838870:CDS |
| TTATAAACAGGTTGCAACTT+TGG | 0.394543 | 5_4:-13411278 | Msa0838870:intron |
| AAAGGGAATACTTCAATGTC+AGG | 0.397558 | 5_4:-13410293 | Msa0838870:CDS |
| ACCTTACCAGTTGAATTAAG+AGG | 0.398367 | 5_4:+13409900 | None:intergenic |
| TTTAAACATGATTTCACCTA+TGG | 0.398368 | 5_4:+13410313 | None:intergenic |
| AAGGTGAGTGTCACAGTTGC+TGG | 0.399927 | 5_4:-13410575 | Msa0838870:CDS |
| ATGTTGTTGCATCTAGTTTG+AGG | 0.405861 | 5_4:+13411182 | None:intergenic |
| GTCAACTTAGGAATTTCTAA+TGG | 0.406509 | 5_4:-13415522 | Msa0838870:CDS |
| ATACGATGAACTTCTTGAAA+AGG | 0.413737 | 5_4:-13410981 | Msa0838870:CDS |
| TTCAAATTGAAAGAACCATT+AGG | 0.416142 | 5_4:+13410191 | None:intergenic |
| GATTTGCCTCTTAATTCAAC+TGG | 0.421617 | 5_4:-13409906 | Msa0838870:CDS |
| ATTTGGTTAATGCCTGCTCT+TGG | 0.425029 | 5_4:-13410743 | Msa0838870:CDS |
| GCAATGGATGGTGTTTCATT+TGG | 0.447289 | 5_4:-13410760 | Msa0838870:CDS |
| GCCTCTTAATTCAACTGGTA+AGG | 0.448931 | 5_4:-13409901 | Msa0838870:CDS |
| TGATGATGGTGACGAGTGTT+TGG | 0.449095 | 5_4:-13410051 | Msa0838870:CDS |
| GAACGAGCAGCCACTGTGTA+TGG | 0.449210 | 5_4:-13415633 | Msa0838870:CDS |
| ATGAAGAGTGTTCCATATGA+TGG | 0.450784 | 5_4:-13410341 | Msa0838870:CDS |
| CTTAACAAAGTGGCAGAGCT+TGG | 0.451298 | 5_4:-13410530 | Msa0838870:CDS |
| AACATGATCATTGTAGATGA+TGG | 0.453182 | 5_4:+13415599 | None:intergenic |
| AAATATTAAGCTAGATATAT+GGG | 0.457434 | 5_4:+13409721 | None:intergenic |
| TGGTTCTGGCTCTGTACGGC+TGG | 0.457483 | 5_4:+13415736 | None:intergenic |
| GCTTCTGCTTTGGTCAACTT+AGG | 0.458586 | 5_4:-13415534 | Msa0838870:CDS |
| TGGTTAATGCCTGCTCTTGG+TGG | 0.459143 | 5_4:-13410740 | Msa0838870:CDS |
| CTAGGTGTTAGGTTACCTAA+TGG | 0.459759 | 5_4:-13410206 | Msa0838870:CDS |
| TATGGTATGACTGAAACATT+AGG | 0.461838 | 5_4:-13410488 | Msa0838870:CDS |
| CAATCATGCAGTCTGCATAT+CGG | 0.463055 | 5_4:+13409635 | None:intergenic |
| GGACTAGGGACCTAGGTGTT+AGG | 0.465511 | 5_4:-13410217 | Msa0838870:CDS |
| GTTCCTAAGAGTGTGGTGTT+TGG | 0.467445 | 5_4:-13409930 | Msa0838870:CDS |
| GTCCAGTTATTGTAAGAAAG+TGG | 0.471102 | 5_4:-13410466 | Msa0838870:CDS |
| TACGATGAACTTCTTGAAAA+GGG | 0.473555 | 5_4:-13410980 | Msa0838870:CDS |
| AGATCAATTAGATGCTCATA+TGG | 0.476810 | 5_4:-13409952 | Msa0838870:CDS |
| AAGGTTGAGACATCTTTCAT+AGG | 0.478199 | 5_4:+13415557 | None:intergenic |
| AAAGATATTATTTATTCTAA+GGG | 0.478681 | 5_4:-13410158 | Msa0838870:CDS |
| AGGGGTTATTGACTTTATGA+TGG | 0.478800 | 5_4:-13410393 | Msa0838870:CDS |
| GGGATGGTTGGTATAGGACT+AGG | 0.479682 | 5_4:-13410232 | Msa0838870:CDS |
| ACAGCTACTTTCAAAACCAT+TGG | 0.487308 | 5_4:+13410089 | None:intergenic |
| GGTGATGGTTGAATCAAAAT+CGG | 0.493513 | 5_4:-13409748 | Msa0838870:three_prime_UTR |
| ATCTTGTATTAGGACAATAA+GGG | 0.496289 | 5_4:+13411045 | None:intergenic |
| GTTTGTGAGTTCATTAGAGG+TGG | 0.501370 | 5_4:-13410132 | Msa0838870:CDS |
| GATGTGTAGTTCACTGATAT+AGG | 0.502126 | 5_4:+13410914 | None:intergenic |
| GACCTGGTTGAGTGCTCTAA+AGG | 0.506891 | 5_4:-13415690 | Msa0838870:CDS |
| GCAATAATTTCCAGAAGGGT+AGG | 0.508940 | 5_4:+13410629 | None:intergenic |
| GGCTCAACTGGAATTCCAAA+AGG | 0.522211 | 5_4:-13410890 | Msa0838870:CDS |
| GCAATTGTGAAATTGAAAGA+TGG | 0.524748 | 5_4:-13410014 | Msa0838870:CDS |
| GTTGACATGTTTAGATGCAA+TGG | 0.528978 | 5_4:-13410776 | Msa0838870:CDS |
| ATATCAGTGAACTACACATC+AGG | 0.529465 | 5_4:-13410911 | Msa0838870:CDS |
| TTTCGATGTGAATCCTATGC+TGG | 0.531354 | 5_4:-13410813 | Msa0838870:CDS |
| ATGTTTGTGCCACCAAGAGC+AGG | 0.540220 | 5_4:+13410731 | None:intergenic |
| ATTCAAAATTCTTAACAAAG+TGG | 0.541410 | 5_4:-13410540 | Msa0838870:CDS |
| GAAATAATAGCACCTGCCAT+TGG | 0.541429 | 5_4:+13411214 | None:intergenic |
| ATTGTCCTAATACAAGATCA+TGG | 0.544219 | 5_4:-13411040 | Msa0838870:CDS |
| CTCAACCAGGTCTTGTGTCA+TGG | 0.545213 | 5_4:+13415701 | None:intergenic |
| TGTCATGGTAACGTCCTCAC+TGG | 0.549143 | 5_4:+13415716 | None:intergenic |
| AAATGAAGTTCATAGTGTGC+TGG | 0.549199 | 5_4:+13411244 | None:intergenic |
| TCAACCATCACCGATGTATG+TGG | 0.558843 | 5_4:+13409759 | None:intergenic |
| AGGAAACTGATCGGTGTCAA+AGG | 0.571406 | 5_4:+13415657 | None:intergenic |
| GTTTGCAATAATTTCCAGAA+GGG | 0.591302 | 5_4:+13410625 | None:intergenic |
| AACCTTTAGAGCACTCAACC+AGG | 0.592689 | 5_4:+13415688 | None:intergenic |
| CGTTACCATGACACAAGACC+TGG | 0.596346 | 5_4:-13415706 | Msa0838870:CDS |
| TTCAATTTCACAATTGCACA+AGG | 0.596592 | 5_4:+13410020 | None:intergenic |
| TCACTGGTTCTGGCTCTGTA+CGG | 0.596684 | 5_4:+13415732 | None:intergenic |
| TCGTATATTAAGGTATCTTG+AGG | 0.597008 | 5_4:+13410998 | None:intergenic |
| AAGGGAATACTTCAATGTCA+GGG | 0.598415 | 5_4:-13410292 | Msa0838870:CDS |
| AGTTTGCAATAATTTCCAGA+AGG | 0.600004 | 5_4:+13410624 | None:intergenic |
| TGGTATAGGACTAGGGACCT+AGG | 0.607960 | 5_4:-13410224 | Msa0838870:CDS |
| CATTAGGTAACCTAACACCT+AGG | 0.611239 | 5_4:+13410207 | None:intergenic |
| CAGTCCACATACATCGGTGA+TGG | 0.617044 | 5_4:-13409763 | Msa0838870:three_prime_UTR |
| AGCCACTGTGTATGGTGACA+AGG | 0.623725 | 5_4:-13415625 | Msa0838870:CDS |
| TTCATGCAGTCCACATACAT+CGG | 0.634071 | 5_4:-13409769 | Msa0838870:three_prime_UTR |
| GTGGGGAGATATGATGATGA+TGG | 0.634328 | 5_4:-13410065 | Msa0838870:CDS |
| TGACTCAATTAATTAAGGCG+TGG | 0.634956 | 5_4:-13409832 | Msa0838870:exon |
| GCATGATAATAAATAAAACA+AGG | 0.639387 | 5_4:-13409573 | Msa0838870:three_prime_UTR |
| TCTTGTATTAGGACAATAAG+GGG | 0.643394 | 5_4:+13411046 | None:intergenic |
| AGTTGACCAAAGCAGAAGCA+AGG | 0.644972 | 5_4:+13415538 | None:intergenic |
| GGATGGTTGGTATAGGACTA+GGG | 0.648496 | 5_4:-13410231 | Msa0838870:CDS |
| GCTCGTTCTAGGAAACTGAT+CGG | 0.653949 | 5_4:+13415648 | None:intergenic |
| ACATGTTTAGATGCAATGGA+TGG | 0.657007 | 5_4:-13410772 | Msa0838870:CDS |
| AAAATATTAAAAGTATTGGG+TGG | 0.659131 | 5_4:-13409857 | Msa0838870:CDS |
| CTGCAGCAAAGCCAAATCAG+TGG | 0.663736 | 5_4:-13409599 | Msa0838870:three_prime_UTR |
| TGTATTAGGACAATAAGGGG+TGG | 0.669864 | 5_4:+13411049 | None:intergenic |
| CATAAGGTAACACATTTGTG+TGG | 0.685677 | 5_4:-13410656 | Msa0838870:CDS |
| TCATATGGTTCCTAAGAGTG+TGG | 0.716052 | 5_4:-13409937 | Msa0838870:CDS |
| GTACAGAGCCAGAACCAGTG+AGG | 0.747570 | 5_4:-13415730 | Msa0838870:CDS |
| AACCTTGTCACCATACACAG+TGG | 0.766651 | 5_4:+13415623 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATATTTATAATTA+GGG | + | chr5_4:13410728-13410747 | None:intergenic | 0.0% |
| !!! | TATAAATAGAAATTTTATCT+TGG | + | chr5_4:13410871-13410890 | None:intergenic | 10.0% |
| !! | GTATTTGATATAATTTAAAT+GGG | + | chr5_4:13411003-13411022 | None:intergenic | 10.0% |
| !! | TGTATTTGATATAATTTAAA+TGG | + | chr5_4:13411004-13411023 | None:intergenic | 10.0% |
| !! | TTATATCGTTAAAAATAAAA+AGG | - | chr5_4:13411033-13411052 | Msa0838870:CDS | 10.0% |
| !!! | TTTTACATTTTTAATATGAA+CGG | + | chr5_4:13411082-13411101 | None:intergenic | 10.0% |
| !! | TAAACAAATTAAAAAACTAA+GGG | - | chr5_4:13412280-13412299 | Msa0838870:intron | 10.0% |
| !! | TTACAAAATACAATAAATTA+TGG | - | chr5_4:13412810-13412829 | Msa0838870:intron | 10.0% |
| !!! | AATTTATTTTTTTTAAATGG+TGG | - | chr5_4:13412926-13412945 | Msa0838870:intron | 10.0% |
| !!! | ATATGTTGTTATTTTTTTAT+TGG | + | chr5_4:13413372-13413391 | None:intergenic | 10.0% |
| !! | AGAAGAATATTTAAATTATA+AGG | - | chr5_4:13413826-13413845 | Msa0838870:intron | 10.0% |
| !! | TAATCAAAACATAAATTAAA+AGG | + | chr5_4:13413894-13413913 | None:intergenic | 10.0% |
| !! | AAAAGATATTATTTATTCTA+AGG | - | chr5_4:13415158-13415177 | Msa0838870:intron | 10.0% |
| !! | AAAGATATTATTTATTCTAA+GGG | - | chr5_4:13415159-13415178 | Msa0838870:intron | 10.0% |
| !! | TTACATTGATACATTATATT+TGG | + | chr5_4:13409941-13409960 | None:intergenic | 15.0% |
| !!! | AAATGTTTTTGTCTAAATTT+TGG | - | chr5_4:13410041-13410060 | Msa0838870:CDS | 15.0% |
| !! | TAATAAAAACTTACTTCTTT+GGG | + | chr5_4:13410590-13410609 | None:intergenic | 15.0% |
| !! | TTAATAAAAACTTACTTCTT+TGG | + | chr5_4:13410591-13410610 | None:intergenic | 15.0% |
| !!! | AGTAAGTTTTTATTAAAAAG+TGG | - | chr5_4:13410595-13410614 | Msa0838870:CDS | 15.0% |
| !!! | TGATTTAAAACATTCAAAAA+AGG | - | chr5_4:13411182-13411201 | Msa0838870:CDS | 15.0% |
| !!! | ACGATATAATTTTACAAATT+TGG | + | chr5_4:13411317-13411336 | None:intergenic | 15.0% |
| !!! | AATAACATGTTTTTTCTTAA+TGG | + | chr5_4:13411775-13411794 | None:intergenic | 15.0% |
| !!! | TAATAACGTGTTTTTTTTAA+GGG | + | chr5_4:13411803-13411822 | None:intergenic | 15.0% |
| !!! | TTAATAACGTGTTTTTTTTA+AGG | + | chr5_4:13411804-13411823 | None:intergenic | 15.0% |
| !! | AAAAAAACACGTTATTAAAA+TGG | - | chr5_4:13411806-13411825 | Msa0838870:intron | 15.0% |
| !! | AAAATAATAATAAATCTGTG+TGG | + | chr5_4:13411892-13411911 | None:intergenic | 15.0% |
| !! | GTAAACAAATTAAAAAACTA+AGG | - | chr5_4:13412279-13412298 | Msa0838870:intron | 15.0% |
| !!! | ATATTTTAACAAAAAAGGAA+AGG | + | chr5_4:13412434-13412453 | None:intergenic | 15.0% |
| !!! | AGTGTATATTTTAACAAAAA+AGG | + | chr5_4:13412439-13412458 | None:intergenic | 15.0% |
| !!! | CTTGTTTCATATTTTTTATT+AGG | + | chr5_4:13412729-13412748 | None:intergenic | 15.0% |
| !! | TAGTGCATATTTAATTATTA+AGG | - | chr5_4:13413005-13413024 | Msa0838870:intron | 15.0% |
| !! | AGTGCATATTTAATTATTAA+GGG | - | chr5_4:13413006-13413025 | Msa0838870:intron | 15.0% |
| !!! | AGTATAAATTTTTCTTTTCA+AGG | - | chr5_4:13413065-13413084 | Msa0838870:intron | 15.0% |
| !! | ATGATATATATATATATGCA+AGG | - | chr5_4:13413321-13413340 | Msa0838870:intron | 15.0% |
| !! | AATATAGAATTCAAAATACA+AGG | - | chr5_4:13413500-13413519 | Msa0838870:intron | 15.0% |
| !!! | AACTTTTGTAAATAATCAAA+TGG | + | chr5_4:13413671-13413690 | None:intergenic | 15.0% |
| !! | GAGAATACAAATTAATATAA+TGG | - | chr5_4:13413709-13413728 | Msa0838870:intron | 15.0% |
| !! | GAATATTTAAATTATAAGGT+TGG | - | chr5_4:13413830-13413849 | Msa0838870:intron | 15.0% |
| !!! | TATAGGAAAAAAATTCTTTT+CGG | + | chr5_4:13413989-13414008 | None:intergenic | 15.0% |
| !! | TAATATAAGAAAGAAAATTG+AGG | + | chr5_4:13414022-13414041 | None:intergenic | 15.0% |
| !! | TTCTTTCTTATATTATAAAC+AGG | - | chr5_4:13414027-13414046 | Msa0838870:intron | 15.0% |
| !!! | AGAGAAAATATTAAAAGTAT+TGG | - | chr5_4:13415456-13415475 | Msa0838870:intron | 15.0% |
| !!! | GAGAAAATATTAAAAGTATT+GGG | - | chr5_4:13415457-13415476 | Msa0838870:intron | 15.0% |
| !! | AAATATTAAGCTAGATATAT+GGG | + | chr5_4:13415599-13415618 | None:intergenic | 15.0% |
| !! | AAAATATTAAGCTAGATATA+TGG | + | chr5_4:13415600-13415619 | None:intergenic | 15.0% |
| !! | TAATTAGATTAGAGATTAAA+TGG | + | chr5_4:13415659-13415678 | None:intergenic | 15.0% |
| !! | ATTGAAGAACATAATTCTAT+TGG | + | chr5_4:13410135-13410154 | None:intergenic | 20.0% |
| !! | AATTAACTGGTTATTCTAAT+TGG | - | chr5_4:13410167-13410186 | Msa0838870:CDS | 20.0% |
| !! | ATTAAATTTCACTGAATCAA+CGG | - | chr5_4:13410945-13410964 | Msa0838870:CDS | 20.0% |
| !! | AAAATTATATCGTTACGAAA+AGG | - | chr5_4:13411324-13411343 | Msa0838870:intron | 20.0% |
| !!! | TTCATATTTTTTTTTCCTTC+AGG | - | chr5_4:13411543-13411562 | Msa0838870:intron | 20.0% |
| !!! | AAATAAAGTTTTTCAAAGAC+TGG | + | chr5_4:13411837-13411856 | None:intergenic | 20.0% |
| !! | ATAAGGAGAAATAGAAAAAA+AGG | + | chr5_4:13412185-13412204 | None:intergenic | 20.0% |
| !!! | TCTAATATATTTTGAATGAG+AGG | + | chr5_4:13412469-13412488 | None:intergenic | 20.0% |
| !! | AAAAATAATCTAACACACTT+CGG | - | chr5_4:13412604-13412623 | Msa0838870:intron | 20.0% |
| !!! | ATTTTTTATTAGGCTTTTCT+TGG | + | chr5_4:13412752-13412771 | None:intergenic | 20.0% |
| !! | ATATTTAATTATTAAGGGAG+AGG | - | chr5_4:13413011-13413030 | Msa0838870:intron | 20.0% |
| !! | TATTTAATTATTAAGGGAGA+GGG | - | chr5_4:13413012-13413031 | Msa0838870:intron | 20.0% |
| !!! | TAAATTTTTCTTTTCAAGGA+AGG | - | chr5_4:13413069-13413088 | Msa0838870:intron | 20.0% |
| !!! | AAATTTTTCTTTTCAAGGAA+GGG | - | chr5_4:13413070-13413089 | Msa0838870:intron | 20.0% |
| !!! | TGTTGTTATTTTTTTATTGG+TGG | + | chr5_4:13413369-13413388 | None:intergenic | 20.0% |
| !! | GAGGAATATAATAAAAAACT+TGG | - | chr5_4:13413522-13413541 | Msa0838870:intron | 20.0% |
| !!! | TTTTGTAAATAATCAAATGG+AGG | + | chr5_4:13413668-13413687 | None:intergenic | 20.0% |
| !! | AACAACATTAGCATTAATAT+TGG | - | chr5_4:13414150-13414169 | Msa0838870:intron | 20.0% |
| !!! | TTGTTAAGAATTTTGAATGA+TGG | + | chr5_4:13414775-13414794 | None:intergenic | 20.0% |
| !! | ATTCAAAATTCTTAACAAAG+TGG | - | chr5_4:13414777-13414796 | Msa0838870:intron | 20.0% |
| !!! | TTTGATGTTAATATTGGTTA+TGG | - | chr5_4:13414811-13414830 | Msa0838870:intron | 20.0% |
| !! | TGAATTATGTTGATCAAAAA+GGG | - | chr5_4:13414905-13414924 | Msa0838870:intron | 20.0% |
| !!! | AAAATATTAAAAGTATTGGG+TGG | - | chr5_4:13415460-13415479 | Msa0838870:intron | 20.0% |
| !! | GCATGATAATAAATAAAACA+AGG | - | chr5_4:13415744-13415763 | Msa0838870:CDS | 20.0% |
| !! | ATAAATAAAACAAGGCAAAA+TGG | - | chr5_4:13415752-13415771 | Msa0838870:CDS | 20.0% |
| !! | ATGATCATGTTAGATTTTCT+TGG | - | chr5_4:13409730-13409749 | Msa0838870:three_prime_UTR | 25.0% |
| ! | GAATTAATGTAGTCATCATA+GGG | + | chr5_4:13409852-13409871 | None:intergenic | 25.0% |
| ! | ATTATATTTGGTCATGAAGA+GGG | + | chr5_4:13409929-13409948 | None:intergenic | 25.0% |
| ! | GGTAAACTGTAACAAAATAT+TGG | + | chr5_4:13410114-13410133 | None:intergenic | 25.0% |
| !!! | TTCTATCCATGGTTTTAAAT+TGG | - | chr5_4:13410206-13410225 | Msa0838870:CDS | 25.0% |
| !! | TAATGACCAATTTAAAACCA+TGG | + | chr5_4:13410215-13410234 | None:intergenic | 25.0% |
| ! | GGTCATTAAATCATACAATT+AGG | - | chr5_4:13410227-13410246 | Msa0838870:CDS | 25.0% |
| ! | GATGATTGAACTTGATTATT+GGG | - | chr5_4:13410278-13410297 | Msa0838870:CDS | 25.0% |
| ! | ATCGATTACACTAATCAATT+TGG | - | chr5_4:13410457-13410476 | Msa0838870:CDS | 25.0% |
| ! | ACGTAATTAGCAGTTAATTA+TGG | - | chr5_4:13410526-13410545 | Msa0838870:CDS | 25.0% |
| ! | TAAATAGTATTCCAGAGTAT+TGG | - | chr5_4:13410556-13410575 | Msa0838870:CDS | 25.0% |
| !!! | ATAATTAGGGTCTTGTTAAT+CGG | + | chr5_4:13410715-13410734 | None:intergenic | 25.0% |
| !!! | TCATGAAAACTTGTTTGTTT+TGG | + | chr5_4:13410802-13410821 | None:intergenic | 25.0% |
| ! | TTATCAATAGACCAAGTATT+TGG | - | chr5_4:13411488-13411507 | Msa0838870:intron | 25.0% |
| ! | CATTAGAATGTCTTCAATAT+GGG | - | chr5_4:13411862-13411881 | Msa0838870:intron | 25.0% |
| ! | TTCAGAAGAGAATGAAAATA+AGG | + | chr5_4:13412202-13412221 | None:intergenic | 25.0% |
| ! | AATTGTACACTATAGTAGAT+TGG | - | chr5_4:13412232-13412251 | Msa0838870:intron | 25.0% |
| ! | TGTAATTCAAACATCTTTGA+GGG | + | chr5_4:13413126-13413145 | None:intergenic | 25.0% |
| ! | ATGTAATTCAAACATCTTTG+AGG | + | chr5_4:13412409-13412428 | None:intergenic | 25.0% |
| !!! | TGTATTTCAAGTTTCTCTTA+GGG | + | chr5_4:13412510-13412529 | None:intergenic | 25.0% |
| !!! | ATGTATTTCAAGTTTCTCTT+AGG | + | chr5_4:13412511-13412530 | None:intergenic | 25.0% |
| !!! | TGTAGATTTTAACATAAGAG+GGG | + | chr5_4:13412540-13412559 | None:intergenic | 25.0% |
| !!! | GTGTAGATTTTAACATAAGA+GGG | + | chr5_4:13412541-13412560 | None:intergenic | 25.0% |
| !!! | AGTGTAGATTTTAACATAAG+AGG | + | chr5_4:13412542-13412561 | None:intergenic | 25.0% |
| ! | TTGTAATTCAAGCATCTTAT+AGG | - | chr5_4:13413035-13413054 | Msa0838870:intron | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+GGG | - | chr5_4:13413036-13413055 | Msa0838870:intron | 25.0% |
| !!! | AATTTTTCTTTTCAAGGAAG+GGG | - | chr5_4:13413071-13413090 | Msa0838870:intron | 25.0% |
| !!! | AGTGCATATTTTAACATAAG+AGG | - | chr5_4:13413094-13413113 | Msa0838870:intron | 25.0% |
| !!! | GTGCATATTTTAACATAAGA+GGG | - | chr5_4:13413095-13413114 | Msa0838870:intron | 25.0% |
| !!! | TGCATATTTTAACATAAGAG+GGG | - | chr5_4:13413096-13413115 | Msa0838870:intron | 25.0% |
| ! | TGTAATTCAAACATCTTTGA+GGG | - | chr5_4:13413126-13413145 | Msa0838870:intron | 25.0% |
| ! | ATATATATATATGCAAGGTC+CGG | - | chr5_4:13413326-13413345 | Msa0838870:intron | 25.0% |
| !!! | TGTTATTTTTTTATTGGTGG+TGG | + | chr5_4:13413366-13413385 | None:intergenic | 25.0% |
| ! | GAAAGATAATGCAATGAATA+TGG | + | chr5_4:13413447-13413466 | None:intergenic | 25.0% |
| ! | ATAGAATTCAAAATACAAGG+AGG | - | chr5_4:13413503-13413522 | Msa0838870:intron | 25.0% |
| !! | AAATGTAGCTTGTCTAATTT+CGG | - | chr5_4:13413748-13413767 | Msa0838870:intron | 25.0% |
| !!! | TGGAATTCCAAATTTTTCAA+AGG | - | chr5_4:13413850-13413869 | Msa0838870:intron | 25.0% |
| !!! | GGAATTCCAAATTTTTCAAA+GGG | - | chr5_4:13413851-13413870 | Msa0838870:intron | 25.0% |
| !!! | GAATTCCAAATTTTTCAAAG+GGG | - | chr5_4:13413852-13413871 | Msa0838870:intron | 25.0% |
| ! | GTTGGTTAGGTAAATTTATT+TGG | + | chr5_4:13413947-13413966 | None:intergenic | 25.0% |
| ! | TATAATGAGCAATTACATGT+TGG | + | chr5_4:13413965-13413984 | None:intergenic | 25.0% |
| ! | ATCTTGTATTAGGACAATAA+GGG | + | chr5_4:13414275-13414294 | None:intergenic | 25.0% |
| ! | AAGAAGTTCATCGTATATTA+AGG | + | chr5_4:13414332-13414351 | None:intergenic | 25.0% |
| !! | TATTAGGCATTTTTCTCATA+AGG | - | chr5_4:13414723-13414742 | Msa0838870:intron | 25.0% |
| ! | CTTGGATTTGATGTTAATAT+TGG | - | chr5_4:13414805-13414824 | Msa0838870:intron | 25.0% |
| ! | CTGAATTATGTTGATCAAAA+AGG | - | chr5_4:13414904-13414923 | Msa0838870:intron | 25.0% |
| ! | GAATTATGTTGATCAAAAAG+GGG | - | chr5_4:13414906-13414925 | Msa0838870:intron | 25.0% |
| ! | TTTAAACATGATTTCACCTA+TGG | + | chr5_4:13415007-13415026 | None:intergenic | 25.0% |
| ! | ATAGGTGAAATCATGTTTAA+AGG | - | chr5_4:13415006-13415025 | Msa0838870:intron | 25.0% |
| ! | TAGGTGAAATCATGTTTAAA+GGG | - | chr5_4:13415007-13415026 | Msa0838870:intron | 25.0% |
| ! | TTCAAATTGAAAGAACCATT+AGG | + | chr5_4:13415129-13415148 | None:intergenic | 25.0% |
| AACATGATCATTGTAGATGA+TGG | + | chr5_4:13409721-13409740 | None:intergenic | 30.0% | |
| GTCAACTTAGGAATTTCTAA+TGG | - | chr5_4:13409795-13409814 | Msa0838870:three_prime_UTR | 30.0% | |
| CGAATTAATGTAGTCATCAT+AGG | + | chr5_4:13409853-13409872 | None:intergenic | 30.0% | |
| CATTATATTTGGTCATGAAG+AGG | + | chr5_4:13409930-13409949 | None:intergenic | 30.0% | |
| TCGTGCATGAATTAATTAAC+TGG | - | chr5_4:13410154-13410173 | Msa0838870:CDS | 30.0% | |
| AAATAGTTAATAAGCTCCAC+AGG | - | chr5_4:13410253-13410272 | Msa0838870:CDS | 30.0% | |
| GGATGATTGAACTTGATTAT+TGG | - | chr5_4:13410277-13410296 | Msa0838870:CDS | 30.0% | |
| TGATAAGGTAAGTAAAGTCT+AGG | + | chr5_4:13410317-13410336 | None:intergenic | 30.0% | |
| ! | TAATTTGGAGTTCAGTGATA+AGG | + | chr5_4:13410332-13410351 | None:intergenic | 30.0% |
| ! | AAGGCTTTTATATATTGCCA+AGG | - | chr5_4:13411201-13411220 | Msa0838870:CDS | 30.0% |
| !!! | AAAGGCTTTTTTGAATTCGA+TGG | + | chr5_4:13411350-13411369 | None:intergenic | 30.0% |
| ATCTTCTAACTCCAAATACT+TGG | + | chr5_4:13411502-13411521 | None:intergenic | 30.0% | |
| AGAATTATTTCAGATCCTGA+AGG | + | chr5_4:13411561-13411580 | None:intergenic | 30.0% | |
| ATTCTATAAGCGCGTAATTA+TGG | - | chr5_4:13411576-13411595 | Msa0838870:intron | 30.0% | |
| ! | TAGATAAACAGTGTTGAACA+CGG | + | chr5_4:13411624-13411643 | None:intergenic | 30.0% |
| TTTCTTAATGGCGTAAATTC+TGG | + | chr5_4:13411763-13411782 | None:intergenic | 30.0% | |
| CCATATTGAAGACATTCTAA+TGG | + | chr5_4:13411864-13411883 | None:intergenic | 30.0% | |
| CCATTAGAATGTCTTCAATA+TGG | - | chr5_4:13411861-13411880 | Msa0838870:intron | 30.0% | |
| AAACAGAATGATGTCAGAAA+AGG | + | chr5_4:13411922-13411941 | None:intergenic | 30.0% | |
| ! | TTTTCTGACATCATTCTGTT+TGG | - | chr5_4:13411921-13411940 | Msa0838870:intron | 30.0% |
| AATAGACCATGTACAAGAAT+GGG | + | chr5_4:13412162-13412181 | None:intergenic | 30.0% | |
| !! | GTATTTCAAGTTTCTCTTAG+GGG | + | chr5_4:13412509-13412528 | None:intergenic | 30.0% |
| CGGAAAAAAAATAGTATTGC+AGG | - | chr5_4:13412624-13412643 | Msa0838870:intron | 30.0% | |
| GTAATTCAAGCATCTTATAG+GGG | - | chr5_4:13413037-13413056 | Msa0838870:intron | 30.0% | |
| GTGTAATTCAAACATCTTTG+AGG | - | chr5_4:13413125-13413144 | Msa0838870:intron | 30.0% | |
| TATATATATATGCAAGGTCC+GGG | - | chr5_4:13413327-13413346 | Msa0838870:intron | 30.0% | |
| CAACCATATTCATTGCATTT+CGG | - | chr5_4:13413475-13413494 | Msa0838870:intron | 30.0% | |
| TAACCGAAATGCAATGAATA+TGG | + | chr5_4:13413481-13413500 | None:intergenic | 30.0% | |
| GACTTTGATAGAAAACCTAA+TGG | + | chr5_4:13413593-13413612 | None:intergenic | 30.0% | |
| ATTCTTCTCTTAGACATTTG+TGG | + | chr5_4:13413814-13413833 | None:intergenic | 30.0% | |
| ! | TTTGTCCCCTTTGAAAAATT+TGG | + | chr5_4:13413860-13413879 | None:intergenic | 30.0% |
| ATTGAGGTCTTCATATGTAT+AGG | + | chr5_4:13414006-13414025 | None:intergenic | 30.0% | |
| TTATAAACAGGTTGCAACTT+TGG | - | chr5_4:13414039-13414058 | Msa0838870:intron | 30.0% | |
| TCTTGTATTAGGACAATAAG+GGG | + | chr5_4:13414274-13414293 | None:intergenic | 30.0% | |
| GATCTTGTATTAGGACAATA+AGG | + | chr5_4:13414276-13414295 | None:intergenic | 30.0% | |
| ATTGTCCTAATACAAGATCA+TGG | - | chr5_4:13414277-13414296 | Msa0838870:intron | 30.0% | |
| ! | TCGTATATTAAGGTATCTTG+AGG | + | chr5_4:13414322-13414341 | None:intergenic | 30.0% |
| ATACGATGAACTTCTTGAAA+AGG | - | chr5_4:13414336-13414355 | Msa0838870:intron | 30.0% | |
| TACGATGAACTTCTTGAAAA+GGG | - | chr5_4:13414337-13414356 | Msa0838870:intron | 30.0% | |
| ATAGGATCACATTCATTTCT+AGG | + | chr5_4:13414388-13414407 | None:intergenic | 30.0% | |
| ! | TGATTATAAACTGCTCCTTT+TGG | + | chr5_4:13414445-13414464 | None:intergenic | 30.0% |
| TGAAGCAATTCATGTTCATA+AGG | - | chr5_4:13414645-13414664 | Msa0838870:intron | 30.0% | |
| GTTTGCAATAATTTCCAGAA+GGG | + | chr5_4:13414695-13414714 | None:intergenic | 30.0% | |
| AGTTTGCAATAATTTCCAGA+AGG | + | chr5_4:13414696-13414715 | None:intergenic | 30.0% | |
| TTGCAAACTGTGACATTATT+AGG | - | chr5_4:13414707-13414726 | Msa0838870:intron | 30.0% | |
| TATGGTATGACTGAAACATT+AGG | - | chr5_4:13414829-13414848 | Msa0838870:intron | 30.0% | |
| TTCCACTTTCTTACAATAAC+TGG | + | chr5_4:13414856-13414875 | None:intergenic | 30.0% | |
| !! | TGTTTTGTTGAATCATCCAA+TGG | - | chr5_4:13415212-13415231 | Msa0838870:intron | 30.0% |
| TTCAATTTCACAATTGCACA+AGG | + | chr5_4:13415300-13415319 | None:intergenic | 30.0% | |
| GCAATTGTGAAATTGAAAGA+TGG | - | chr5_4:13415303-13415322 | Msa0838870:intron | 30.0% | |
| AGATCAATTAGATGCTCATA+TGG | - | chr5_4:13415365-13415384 | Msa0838870:intron | 30.0% | |
| TGGTGTGACTCAATTAATTA+AGG | - | chr5_4:13415480-13415499 | Msa0838870:intron | 30.0% | |
| AAGGTTGAGACATCTTTCAT+AGG | + | chr5_4:13409763-13409782 | None:intergenic | 35.0% | |
| CTGTAGATGAAATGAAAGCA+GGG | + | chr5_4:13409890-13409909 | None:intergenic | 35.0% | |
| AAGAGGGAACAAACAATAGT+TGG | + | chr5_4:13409913-13409932 | None:intergenic | 35.0% | |
| ! | GGATAGAACACTAGTTTGTA+TGG | + | chr5_4:13410194-13410213 | None:intergenic | 35.0% |
| ACAAACTAGTGTTCTATCCA+TGG | - | chr5_4:13410195-13410214 | Msa0838870:CDS | 35.0% | |
| AGAAAGGGGATCTCATAATT+TGG | + | chr5_4:13410347-13410366 | None:intergenic | 35.0% | |
| ! | TCTCATAATTTGGAGTTCAG+TGG | + | chr5_4:13410337-13410356 | None:intergenic | 35.0% |
| AGAAAGGGGATCTCATAATT+TGG | + | chr5_4:13410347-13410366 | None:intergenic | 35.0% | |
| TCATTAAGTGACTGCAAAAC+TGG | + | chr5_4:13410494-13410513 | None:intergenic | 35.0% | |
| ! | TAATCGGTGTCTTTGTCTTT+GGG | + | chr5_4:13410699-13410718 | None:intergenic | 35.0% |
| ! | TTAATCGGTGTCTTTGTCTT+TGG | + | chr5_4:13410700-13410719 | None:intergenic | 35.0% |
| AGAGTTGTGAGATCATTACT+TGG | - | chr5_4:13410823-13410842 | Msa0838870:CDS | 35.0% | |
| AATCCTTAACCAATACTCTG+AGG | - | chr5_4:13410892-13410911 | Msa0838870:CDS | 35.0% | |
| ATCCTTAACCAATACTCTGA+GGG | - | chr5_4:13410893-13410912 | Msa0838870:CDS | 35.0% | |
| GAGAGAGATGAACTTTGTAA+AGG | + | chr5_4:13411368-13411387 | None:intergenic | 35.0% | |
| ATCGTTTACCAACTCTAACA+TGG | - | chr5_4:13411429-13411448 | Msa0838870:intron | 35.0% | |
| GGAGTTAGAAGATGATTCAT+TGG | - | chr5_4:13411509-13411528 | Msa0838870:intron | 35.0% | |
| AAGCGCGTAATTATGGAAAA+TGG | - | chr5_4:13411583-13411602 | Msa0838870:intron | 35.0% | |
| AGCGCGTAATTATGGAAAAT+GGG | - | chr5_4:13411584-13411603 | Msa0838870:intron | 35.0% | |
| GAAATGTCAATGACCTAACT+CGG | + | chr5_4:13411732-13411751 | None:intergenic | 35.0% | |
| TAATGGCGTAAATTCTGGTA+TGG | + | chr5_4:13411758-13411777 | None:intergenic | 35.0% | |
| ATTACAACACACACCATTCT+TGG | - | chr5_4:13411960-13411979 | Msa0838870:intron | 35.0% | |
| TTACAACACACACCATTCTT+GGG | - | chr5_4:13411961-13411980 | Msa0838870:intron | 35.0% | |
| ACAACACATACAACACATCT+GGG | - | chr5_4:13412065-13412084 | Msa0838870:intron | 35.0% | |
| CAAGAATGGGGAAAATACTT+GGG | + | chr5_4:13412149-13412168 | None:intergenic | 35.0% | |
| ACAAGAATGGGGAAAATACT+TGG | + | chr5_4:13412150-13412169 | None:intergenic | 35.0% | |
| ! | ATTTTCCCCATTCTTGTACA+TGG | - | chr5_4:13412153-13412172 | Msa0838870:intron | 35.0% |
| ATAGACCATGTACAAGAATG+GGG | + | chr5_4:13412161-13412180 | None:intergenic | 35.0% | |
| GAATAGACCATGTACAAGAA+TGG | + | chr5_4:13412163-13412182 | None:intergenic | 35.0% | |
| TACACTATAGTAGATTGGTG+TGG | - | chr5_4:13412237-13412256 | Msa0838870:intron | 35.0% | |
| !! | TATTTTGAATGAGAGGTGAG+AGG | + | chr5_4:13412462-13412481 | None:intergenic | 35.0% |
| !! | AGATTTTAACATAAGAGGGG+AGG | + | chr5_4:13412537-13412556 | None:intergenic | 35.0% |
| ! | ATTCAAACATCTTTGAGGGA+AGG | - | chr5_4:13413130-13413149 | Msa0838870:intron | 35.0% |
| ! | TTCAAACATCTTTGAGGGAA+GGG | - | chr5_4:13413131-13413150 | Msa0838870:intron | 35.0% |
| ATATATATATGCAAGGTCCG+GGG | - | chr5_4:13413328-13413347 | Msa0838870:intron | 35.0% | |
| !!! | ATTTTTTTATTGGTGGTGGC+CGG | + | chr5_4:13413362-13413381 | None:intergenic | 35.0% |
| AAAACATGAAGCACACCATT+AGG | - | chr5_4:13413575-13413594 | Msa0838870:intron | 35.0% | |
| ACAAAACAAATGATGTGGGA+GGG | + | chr5_4:13413780-13413799 | None:intergenic | 35.0% | |
| TACAAAACAAATGATGTGGG+AGG | + | chr5_4:13413781-13413800 | None:intergenic | 35.0% | |
| CCGTACAAAACAAATGATGT+GGG | + | chr5_4:13413784-13413803 | None:intergenic | 35.0% | |
| !!! | CCCACATCATTTGTTTTGTA+CGG | - | chr5_4:13413781-13413800 | Msa0838870:intron | 35.0% |
| ACCGTACAAAACAAATGATG+TGG | + | chr5_4:13413785-13413804 | None:intergenic | 35.0% | |
| ! | TGAGCAATTACATGTTGGTT+AGG | + | chr5_4:13413960-13413979 | None:intergenic | 35.0% |
| AAATGAAGTTCATAGTGTGC+TGG | + | chr5_4:13414076-13414095 | None:intergenic | 35.0% | |
| ! | GCACACTATGAACTTCATTT+TGG | - | chr5_4:13414076-13414095 | Msa0838870:intron | 35.0% |
| !! | ACTTCATTTTGGTGTACCAA+TGG | - | chr5_4:13414087-13414106 | Msa0838870:intron | 35.0% |
| ! | ATGTTGTTGCATCTAGTTTG+AGG | + | chr5_4:13414138-13414157 | None:intergenic | 35.0% |
| GAGGTATATCTTTCACTAGT+TGG | + | chr5_4:13414303-13414322 | None:intergenic | 35.0% | |
| GATGTGTAGTTCACTGATAT+AGG | + | chr5_4:13414406-13414425 | None:intergenic | 35.0% | |
| ATATCAGTGAACTACACATC+AGG | - | chr5_4:13414406-13414425 | Msa0838870:intron | 35.0% | |
| TAATAGTCGCGAGTGAATTA+AGG | + | chr5_4:13414480-13414499 | None:intergenic | 35.0% | |
| !! | ATCCTATGCTGGTGTTTTTA+TGG | - | chr5_4:13414515-13414534 | Msa0838870:intron | 35.0% |
| GTTGACATGTTTAGATGCAA+TGG | - | chr5_4:13414541-13414560 | Msa0838870:intron | 35.0% | |
| ACATGTTTAGATGCAATGGA+TGG | - | chr5_4:13414545-13414564 | Msa0838870:intron | 35.0% | |
| CATAAGGTAACACATTTGTG+TGG | - | chr5_4:13414661-13414680 | Msa0838870:intron | 35.0% | |
| GTCCAGTTATTGTAAGAAAG+TGG | - | chr5_4:13414851-13414870 | Msa0838870:intron | 35.0% | |
| !! | AGGGGTTATTGACTTTATGA+TGG | - | chr5_4:13414924-13414943 | Msa0838870:intron | 35.0% |
| GGAACACTCTTCATTGTATT+TGG | + | chr5_4:13414970-13414989 | None:intergenic | 35.0% | |
| !! | ATGAAGAGTGTTCCATATGA+TGG | - | chr5_4:13414976-13414995 | Msa0838870:intron | 35.0% |
| ! | CCTATGGTTTTTCCATCATA+TGG | + | chr5_4:13414991-13415010 | None:intergenic | 35.0% |
| ! | CCATATGATGGAAAAACCAT+AGG | - | chr5_4:13414988-13415007 | Msa0838870:intron | 35.0% |
| AAAGGGAATACTTCAATGTC+AGG | - | chr5_4:13415024-13415043 | Msa0838870:intron | 35.0% | |
| AAGGGAATACTTCAATGTCA+GGG | - | chr5_4:13415025-13415044 | Msa0838870:intron | 35.0% | |
| ! | AAGTGAGTCATGAAGCTTTT+AGG | - | chr5_4:13415064-13415083 | Msa0838870:intron | 35.0% |
| ! | AGTGAGTCATGAAGCTTTTA+GGG | - | chr5_4:13415065-13415084 | Msa0838870:intron | 35.0% |
| TGAGTTTGTGAGTTCATTAG+AGG | - | chr5_4:13415182-13415201 | Msa0838870:intron | 35.0% | |
| ! | ACAGCTACTTTCAAAACCAT+TGG | + | chr5_4:13415231-13415250 | None:intergenic | 35.0% |
| !!! | GTTTTGAAAGTAGCTGTTGT+GGG | - | chr5_4:13415234-13415253 | Msa0838870:intron | 35.0% |
| !! | TTTTGAAAGTAGCTGTTGTG+GGG | - | chr5_4:13415235-13415254 | Msa0838870:intron | 35.0% |
| GATTTGCCTCTTAATTCAAC+TGG | - | chr5_4:13415411-13415430 | Msa0838870:intron | 35.0% | |
| ACCTTACCAGTTGAATTAAG+AGG | + | chr5_4:13415420-13415439 | None:intergenic | 35.0% | |
| TGACTCAATTAATTAAGGCG+TGG | - | chr5_4:13415485-13415504 | Msa0838870:intron | 35.0% | |
| ! | TTAATTAAGGCGTGGTTTGT+AGG | - | chr5_4:13415493-13415512 | Msa0838870:intron | 35.0% |
| ! | GGTGATGGTTGAATCAAAAT+CGG | - | chr5_4:13415569-13415588 | Msa0838870:CDS | 35.0% |
| ! | TATCATGCAAACCACTGATT+TGG | + | chr5_4:13415732-13415751 | None:intergenic | 35.0% |
| GTAGTCATCATAGGGAGATA+GGG | + | chr5_4:13409844-13409863 | None:intergenic | 40.0% | |
| TGTAGTCATCATAGGGAGAT+AGG | + | chr5_4:13409845-13409864 | None:intergenic | 40.0% | |
| ATGAAATGAAAGCAGGGCAA+AGG | + | chr5_4:13409884-13409903 | None:intergenic | 40.0% | |
| GCTGTAGATGAAATGAAAGC+AGG | + | chr5_4:13409891-13409910 | None:intergenic | 40.0% | |
| TAGTTAATAAGCTCCACAGG+AGG | - | chr5_4:13410256-13410275 | Msa0838870:CDS | 40.0% | |
| AGCTCCATTACTCACAGAAA+GGG | + | chr5_4:13410362-13410381 | None:intergenic | 40.0% | |
| AAGCTCCATTACTCACAGAA+AGG | + | chr5_4:13410363-13410382 | None:intergenic | 40.0% | |
| TCCTCCATTACTCACAGAAA+GGG | + | chr5_4:13410412-13410431 | None:intergenic | 40.0% | |
| ATCCTCCATTACTCACAGAA+AGG | + | chr5_4:13410413-13410432 | None:intergenic | 40.0% | |
| GGGTTGTATAACCAATACTC+TGG | + | chr5_4:13410570-13410589 | None:intergenic | 40.0% | |
| ! | AATCGGTGTCTTTGTCTTTG+GGG | + | chr5_4:13410698-13410717 | None:intergenic | 40.0% |
| ATGCTTAACCAATGTCATCG+GGG | + | chr5_4:13410779-13410798 | None:intergenic | 40.0% | |
| GATGCTTAACCAATGTCATC+GGG | + | chr5_4:13410780-13410799 | None:intergenic | 40.0% | |
| GGATGCTTAACCAATGTCAT+CGG | + | chr5_4:13410781-13410800 | None:intergenic | 40.0% | |
| ACACACTGTAGTTAGAACCT+TGG | + | chr5_4:13411221-13411240 | None:intergenic | 40.0% | |
| CCTAACTCGGTCTTAGAATA+AGG | + | chr5_4:13411719-13411738 | None:intergenic | 40.0% | |
| !! | CCTTATTCTAAGACCGAGTT+AGG | - | chr5_4:13411716-13411735 | Msa0838870:intron | 40.0% |
| TACAACACACACCATTCTTG+GGG | - | chr5_4:13411962-13411981 | Msa0838870:intron | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | + | chr5_4:13412012-13412031 | None:intergenic | 40.0% | |
| ACACATTGTCACACAACATC+TGG | - | chr5_4:13412037-13412056 | Msa0838870:intron | 40.0% | |
| CACATTGTCACACAACATCT+GGG | - | chr5_4:13412038-13412057 | Msa0838870:intron | 40.0% | |
| GATGTGTTGTATGTGTTGTG+TGG | + | chr5_4:13412064-13412083 | None:intergenic | 40.0% | |
| CACAACACATACAACACATC+TGG | - | chr5_4:13412064-13412083 | Msa0838870:intron | 40.0% | |
| ATTAAATCTGGGCCACACAA+AGG | + | chr5_4:13412106-13412125 | None:intergenic | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr5_4:13412005-13412024 | None:intergenic | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr5_4:13412004-13412023 | None:intergenic | 40.0% | |
| ! | TTCAAGTTTCTCTTAGGGGT+GGG | + | chr5_4:13412505-13412524 | None:intergenic | 40.0% |
| !! | TTTCAAGTTTCTCTTAGGGG+TGG | + | chr5_4:13412506-13412525 | None:intergenic | 40.0% |
| TTCAAGCATCTTATAGGGGA+AGG | - | chr5_4:13413041-13413060 | Msa0838870:intron | 40.0% | |
| TCAAGCATCTTATAGGGGAA+GGG | - | chr5_4:13413042-13413061 | Msa0838870:intron | 40.0% | |
| ! | TCAAACATCTTTGAGGGAAG+GGG | - | chr5_4:13413132-13413151 | Msa0838870:intron | 40.0% |
| ! | TGAACTTAGCTCAGTTGGTA+TGG | - | chr5_4:13413291-13413310 | Msa0838870:intron | 40.0% |
| !!! | TTTTTTTATTGGTGGTGGCC+GGG | + | chr5_4:13413361-13413380 | None:intergenic | 40.0% |
| !!! | GTGTGCTTCATGTTTTGACT+AGG | + | chr5_4:13413571-13413590 | None:intergenic | 40.0% |
| CAAAACAAATGATGTGGGAG+GGG | + | chr5_4:13413779-13413798 | None:intergenic | 40.0% | |
| ! | TCATAGTGTGCTGGAGTATT+TGG | + | chr5_4:13414067-13414086 | None:intergenic | 40.0% |
| GAAATAATAGCACCTGCCAT+TGG | + | chr5_4:13414106-13414125 | None:intergenic | 40.0% | |
| GGGTGGCTTGAAATTTCTTT+GGG | + | chr5_4:13414254-13414273 | None:intergenic | 40.0% | |
| TGTATTAGGACAATAAGGGG+TGG | + | chr5_4:13414271-13414290 | None:intergenic | 40.0% | |
| GTTGGCCATGATCTTGTATT+AGG | + | chr5_4:13414285-13414304 | None:intergenic | 40.0% | |
| TTTCGATGTGAATCCTATGC+TGG | - | chr5_4:13414504-13414523 | Msa0838870:intron | 40.0% | |
| GTCCATAAAAACACCAGCAT+AGG | + | chr5_4:13414520-13414539 | None:intergenic | 40.0% | |
| GCAATGGATGGTGTTTCATT+TGG | - | chr5_4:13414557-13414576 | Msa0838870:intron | 40.0% | |
| ATTTGGTTAATGCCTGCTCT+TGG | - | chr5_4:13414574-13414593 | Msa0838870:intron | 40.0% | |
| GCAATAATTTCCAGAAGGGT+AGG | + | chr5_4:13414691-13414710 | None:intergenic | 40.0% | |
| !! | AGTCATGAAGCTTTTAGGGA+TGG | - | chr5_4:13415069-13415088 | Msa0838870:intron | 40.0% |
| !! | ATGAAGCTTTTAGGGATGGT+TGG | - | chr5_4:13415073-13415092 | Msa0838870:intron | 40.0% |
| !! | CTTTTAGGGATGGTTGGTAT+AGG | - | chr5_4:13415079-13415098 | Msa0838870:intron | 40.0% |
| CATTAGGTAACCTAACACCT+AGG | + | chr5_4:13415113-13415132 | None:intergenic | 40.0% | |
| CTAGGTGTTAGGTTACCTAA+TGG | - | chr5_4:13415111-13415130 | Msa0838870:intron | 40.0% | |
| GTTTGTGAGTTCATTAGAGG+TGG | - | chr5_4:13415185-13415204 | Msa0838870:intron | 40.0% | |
| !!! | GGTTTTGAAAGTAGCTGTTG+TGG | - | chr5_4:13415233-13415252 | Msa0838870:intron | 40.0% |
| TCATATGGTTCCTAAGAGTG+TGG | - | chr5_4:13415380-13415399 | Msa0838870:intron | 40.0% | |
| GCCTCTTAATTCAACTGGTA+AGG | - | chr5_4:13415416-13415435 | Msa0838870:intron | 40.0% | |
| TTCATGCAGTCCACATACAT+CGG | - | chr5_4:13415548-13415567 | Msa0838870:CDS | 40.0% | |
| CAATCATGCAGTCTGCATAT+CGG | + | chr5_4:13415685-13415704 | None:intergenic | 40.0% | |
| !! | AACCTTTAGAGCACTCAACC+AGG | + | chr5_4:13409632-13409651 | None:intergenic | 45.0% |
| !! | AGGAAACTGATCGGTGTCAA+AGG | + | chr5_4:13409663-13409682 | None:intergenic | 45.0% |
| !! | GCTCGTTCTAGGAAACTGAT+CGG | + | chr5_4:13409672-13409691 | None:intergenic | 45.0% |
| AACCTTGTCACCATACACAG+TGG | + | chr5_4:13409697-13409716 | None:intergenic | 45.0% | |
| TCTCAACCTTGCTTCTGCTT+TGG | - | chr5_4:13409773-13409792 | Msa0838870:three_prime_UTR | 45.0% | |
| AGTTGACCAAAGCAGAAGCA+AGG | + | chr5_4:13409782-13409801 | None:intergenic | 45.0% | |
| GCTTCTGCTTTGGTCAACTT+AGG | - | chr5_4:13409783-13409802 | Msa0838870:three_prime_UTR | 45.0% | |
| CAAGTTCAATCATCCTCCTG+TGG | + | chr5_4:13410272-13410291 | None:intergenic | 45.0% | |
| GATCCCCTTTCTGTGAGTAA+TGG | - | chr5_4:13410355-13410374 | Msa0838870:CDS | 45.0% | |
| GCTCCATTACTCACAGAAAG+GGG | + | chr5_4:13410361-13410380 | None:intergenic | 45.0% | |
| GATCCCCTTTCTGTGAGTAA+TGG | - | chr5_4:13410355-13410374 | Msa0838870:CDS | 45.0% | |
| CCTCCATTACTCACAGAAAG+GGG | + | chr5_4:13410411-13410430 | None:intergenic | 45.0% | |
| TGACTGCAAAACTGGTTGCT+TGG | + | chr5_4:13410486-13410505 | None:intergenic | 45.0% | |
| !! | TGCCCTCAGAGTATTGGTTA+AGG | + | chr5_4:13410898-13410917 | None:intergenic | 45.0% |
| CGTTTGAGCCATGTTAGAGT+TGG | + | chr5_4:13411440-13411459 | None:intergenic | 45.0% | |
| GTGTGACAATGTGTGTTGTG+TGG | + | chr5_4:13412031-13412050 | None:intergenic | 45.0% | |
| CACAACACAACACCTTTGTG+TGG | - | chr5_4:13412091-13412110 | Msa0838870:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | - | chr5_4:13412110-13412129 | Msa0838870:intron | 45.0% | |
| TCAAGTTTCTCTTAGGGGTG+GGG | + | chr5_4:13412504-13412523 | None:intergenic | 45.0% | |
| CATCGTGAACTTAGCTCAGT+TGG | - | chr5_4:13413286-13413305 | Msa0838870:intron | 45.0% | |
| !!! | TTTTTTATTGGTGGTGGCCG+GGG | + | chr5_4:13413360-13413379 | None:intergenic | 45.0% |
| !! | CATTTTGGTGTACCAATGGC+AGG | - | chr5_4:13414091-13414110 | Msa0838870:intron | 45.0% |
| GGGGTGGCTTGAAATTTCTT+TGG | + | chr5_4:13414255-13414274 | None:intergenic | 45.0% | |
| AACTACACATCAGGCTCAAC+TGG | - | chr5_4:13414415-13414434 | Msa0838870:intron | 45.0% | |
| GGCTCAACTGGAATTCCAAA+AGG | - | chr5_4:13414427-13414446 | Msa0838870:intron | 45.0% | |
| CTTAACAAAGTGGCAGAGCT+TGG | - | chr5_4:13414787-13414806 | Msa0838870:intron | 45.0% | |
| ! | GGATGGTTGGTATAGGACTA+GGG | - | chr5_4:13415086-13415105 | Msa0838870:intron | 45.0% |
| ! | GTGGGGAGATATGATGATGA+TGG | - | chr5_4:13415252-13415271 | Msa0838870:intron | 45.0% |
| !! | TGATGATGGTGACGAGTGTT+TGG | - | chr5_4:13415266-13415285 | Msa0838870:intron | 45.0% |
| ! | GTTCCTAAGAGTGTGGTGTT+TGG | - | chr5_4:13415387-13415406 | Msa0838870:intron | 45.0% |
| TCACCAAACACCACACTCTT+AGG | + | chr5_4:13415393-13415412 | None:intergenic | 45.0% | |
| ! | AAGGCGTGGTTTGTAGGATT+TGG | - | chr5_4:13415499-13415518 | Msa0838870:intron | 45.0% |
| TCAACCATCACCGATGTATG+TGG | + | chr5_4:13415561-13415580 | None:intergenic | 45.0% | |
| !! | GAAATTTAATATTTATAATT+AGG | + | chr5_4:13410729-13410748 | None:intergenic | 5.0% |
| !! | ATATTAAATTTCATATTATA+AGG | - | chr5_4:13410737-13410756 | Msa0838870:CDS | 5.0% |
| !! | GAAATTTAATATTTATAATT+AGG | + | chr5_4:13410729-13410748 | None:intergenic | 5.0% |
| !!! | ATGAATTTATTTTTTTTAAA+TGG | - | chr5_4:13412923-13412942 | Msa0838870:intron | 5.0% |
| !! | TCACTGGTTCTGGCTCTGTA+CGG | + | chr5_4:13409588-13409607 | None:intergenic | 50.0% |
| ! | TGTCATGGTAACGTCCTCAC+TGG | + | chr5_4:13409604-13409623 | None:intergenic | 50.0% |
| CGTTACCATGACACAAGACC+TGG | - | chr5_4:13409611-13409630 | Msa0838870:three_prime_UTR | 50.0% | |
| ! | CTCAACCAGGTCTTGTGTCA+TGG | + | chr5_4:13409619-13409638 | None:intergenic | 50.0% |
| GACCTGGTTGAGTGCTCTAA+AGG | - | chr5_4:13409627-13409646 | Msa0838870:three_prime_UTR | 50.0% | |
| AGCCACTGTGTATGGTGACA+AGG | - | chr5_4:13409692-13409711 | Msa0838870:three_prime_UTR | 50.0% | |
| CCCCTTTCTGTGAGTAATGG+AGG | - | chr5_4:13410358-13410377 | Msa0838870:CDS | 50.0% | |
| !! | TGTCTTTGTCTTTGGGGCAC+TGG | + | chr5_4:13410692-13410711 | None:intergenic | 50.0% |
| AACCAGTACCCCGATGACAT+TGG | - | chr5_4:13410768-13410787 | Msa0838870:CDS | 50.0% | |
| AACCAATGTCATCGGGGTAC+TGG | + | chr5_4:13410773-13410792 | None:intergenic | 50.0% | |
| ! | AACCAATACTCTGAGGGCAC+TGG | - | chr5_4:13410899-13410918 | Msa0838870:CDS | 50.0% |
| AACCAGTGCCCTCAGAGTAT+TGG | + | chr5_4:13410904-13410923 | None:intergenic | 50.0% | |
| !! | ACCATTCTTGGGGAAGCACT+TGG | - | chr5_4:13411972-13411991 | Msa0838870:intron | 50.0% |
| !! | CCATTCTTGGGGAAGCACTT+GGG | - | chr5_4:13411973-13411992 | Msa0838870:intron | 50.0% |
| TGGTTAATGCCTGCTCTTGG+TGG | - | chr5_4:13414577-13414596 | Msa0838870:intron | 50.0% | |
| ATGTTTGTGCCACCAAGAGC+AGG | + | chr5_4:13414589-13414608 | None:intergenic | 50.0% | |
| AAGGTGAGTGTCACAGTTGC+TGG | - | chr5_4:13414742-13414761 | Msa0838870:intron | 50.0% | |
| ! | GGGATGGTTGGTATAGGACT+AGG | - | chr5_4:13415085-13415104 | Msa0838870:intron | 50.0% |
| TGGTATAGGACTAGGGACCT+AGG | - | chr5_4:13415093-13415112 | Msa0838870:intron | 50.0% | |
| CAGTCCACATACATCGGTGA+TGG | - | chr5_4:13415554-13415573 | Msa0838870:CDS | 50.0% | |
| CTGCAGCAAAGCCAAATCAG+TGG | - | chr5_4:13415718-13415737 | Msa0838870:CDS | 50.0% | |
| GTACAGAGCCAGAACCAGTG+AGG | - | chr5_4:13409587-13409606 | Msa0838870:three_prime_UTR | 55.0% | |
| !! | GGTAACGTCCTCACTGGTTC+TGG | + | chr5_4:13409598-13409617 | None:intergenic | 55.0% |
| ACACAGTGGCTGCTCGTTCT+AGG | + | chr5_4:13409683-13409702 | None:intergenic | 55.0% | |
| GAACGAGCAGCCACTGTGTA+TGG | - | chr5_4:13409684-13409703 | Msa0838870:three_prime_UTR | 55.0% | |
| CCCAAGTGCTTCCCCAAGAA+TGG | + | chr5_4:13411976-13411995 | None:intergenic | 55.0% | |
| GGACTAGGGACCTAGGTGTT+AGG | - | chr5_4:13415100-13415119 | Msa0838870:intron | 55.0% | |
| !! | TGGTTCTGGCTCTGTACGGC+TGG | + | chr5_4:13409584-13409603 | None:intergenic | 60.0% |
| AAGGTCCGGGGTTCAAACCC+CGG | - | chr5_4:13413340-13413359 | Msa0838870:intron | 60.0% | |
| GTGTGGTGCACCTACCCTTC+TGG | - | chr5_4:13414678-13414697 | Msa0838870:intron | 60.0% | |
| GGTGGCCGGGGTTTGAACCC+CGG | + | chr5_4:13413348-13413367 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13409558 | 13415781 | 13409558 | ID=Msa0838870;Name=Msa0838870 |
| chr5_4 | mRNA | 13409558 | 13415781 | 13409558 | ID=Msa0838870-mRNA-1;Parent=Msa0838870;Name=Msa0838870-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|1|1|2|281|572 |
| chr5_4 | exon | 13409558 | 13411290 | 13409558 | ID=Msa0838870-mRNA-1:exon:5991;Parent=Msa0838870-mRNA-1 |
| chr5_4 | exon | 13415515 | 13415781 | 13415515 | ID=Msa0838870-mRNA-1:exon:5990;Parent=Msa0838870-mRNA-1 |
| chr5_4 | CDS | 13415515 | 13415781 | 13415515 | ID=Msa0838870-mRNA-1:cds;Parent=Msa0838870-mRNA-1 |
| chr5_4 | CDS | 13409839 | 13411290 | 13409839 | ID=Msa0838870-mRNA-1:cds;Parent=Msa0838870-mRNA-1 |
| chr5_4 | three_prime_UTR | 13409558 | 13409838 | 13409558 | ID=Msa0838870-mRNA-1:three_prime_utr;Parent=Msa0838870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
