Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758570 | RHN54425.1 | 96.329 | 572 | 19 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1132 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758570 | sp|F4HUK6|AAE1_ARATH | 46.703 | 546 | 273 | 8 | 29 | 565 | 9 | 545 | 2.11e-174 | 508 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758570 | A0A396HSQ5 | 96.329 | 572 | 19 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1132 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014280 | Msa0758570 | 0.823605 | 1.265947e-53 | -8.615850e-47 |
Msa0022470 | Msa0758570 | 0.807845 | 4.142447e-50 | -8.615850e-47 |
Msa0026420 | Msa0758570 | 0.810924 | 9.049750e-51 | -8.615850e-47 |
Msa0030800 | Msa0758570 | 0.800487 | 1.408277e-48 | -8.615850e-47 |
Msa0031410 | Msa0758570 | 0.805269 | 1.448547e-49 | -8.615850e-47 |
Msa0053510 | Msa0758570 | 0.801934 | 7.121469e-49 | -8.615850e-47 |
Msa0070120 | Msa0758570 | 0.815363 | 9.605159e-52 | -8.615850e-47 |
Msa0086360 | Msa0758570 | 0.806952 | 6.405632e-50 | -8.615850e-47 |
Msa0090090 | Msa0758570 | 0.801648 | 8.153503e-49 | -8.615850e-47 |
Msa0092970 | Msa0758570 | 0.846363 | 2.277373e-59 | -8.615850e-47 |
Msa0107830 | Msa0758570 | 0.837077 | 6.430557e-57 | -8.615850e-47 |
Msa0118010 | Msa0758570 | 0.849051 | 4.143476e-60 | -8.615850e-47 |
Msa0610580 | Msa0758570 | 0.831943 | 1.252822e-55 | -8.615850e-47 |
Msa0614960 | Msa0758570 | 0.806509 | 7.948462e-50 | -8.615850e-47 |
Msa0615210 | Msa0758570 | 0.802170 | 6.369820e-49 | -8.615850e-47 |
Msa0631130 | Msa0758570 | 0.827178 | 1.805832e-54 | -8.615850e-47 |
Msa0637590 | Msa0758570 | 0.823040 | 1.715474e-53 | -8.615850e-47 |
Msa0651170 | Msa0758570 | 0.834680 | 2.605978e-56 | -8.615850e-47 |
Msa0652590 | Msa0758570 | 0.866577 | 2.575495e-65 | -8.615850e-47 |
Msa0655370 | Msa0758570 | 0.806514 | 7.928253e-50 | -8.615850e-47 |
Msa0662460 | Msa0758570 | 0.850089 | 2.127308e-60 | -8.615850e-47 |
Msa0662580 | Msa0758570 | 0.806026 | 1.004642e-49 | -8.615850e-47 |
Msa0669350 | Msa0758570 | 0.829766 | 4.284051e-55 | -8.615850e-47 |
Msa0670170 | Msa0758570 | 0.808915 | 2.449270e-50 | -8.615850e-47 |
Msa0676860 | Msa0758570 | 0.825735 | 3.986183e-54 | -8.615850e-47 |
Msa0693240 | Msa0758570 | 0.832167 | 1.103418e-55 | -8.615850e-47 |
Msa0694320 | Msa0758570 | 0.843428 | 1.409930e-58 | -8.615850e-47 |
Msa0699170 | Msa0758570 | 0.824727 | 6.901307e-54 | -8.615850e-47 |
Msa0703030 | Msa0758570 | 0.820520 | 6.567080e-53 | -8.615850e-47 |
Msa0704560 | Msa0758570 | 0.844528 | 7.149356e-59 | -8.615850e-47 |
Msa0717860 | Msa0758570 | 0.934681 | 2.771303e-96 | -8.615850e-47 |
Msa0723770 | Msa0758570 | 0.839145 | 1.887239e-57 | -8.615850e-47 |
Msa0731580 | Msa0758570 | 0.810152 | 1.328302e-50 | -8.615850e-47 |
Msa0745160 | Msa0758570 | 0.841831 | 3.742250e-58 | -8.615850e-47 |
Msa0753930 | Msa0758570 | 0.868603 | 5.775220e-66 | -8.615850e-47 |
Msa0758520 | Msa0758570 | 0.990152 | 2.685582e-181 | -8.615850e-47 |
Msa0758570 | Msa0765140 | 0.848590 | 5.563026e-60 | -8.615850e-47 |
Msa0758570 | Msa0804870 | 0.841596 | 4.316222e-58 | -8.615850e-47 |
Msa0758570 | Msa0807020 | 0.820813 | 5.623714e-53 | -8.615850e-47 |
Msa0758570 | Msa0809920 | 0.806632 | 7.486573e-50 | -8.615850e-47 |
Msa0758570 | Msa0817190 | 0.852166 | 5.517059e-61 | -8.615850e-47 |
Msa0758570 | Msa0826240 | 0.800136 | 1.660372e-48 | -8.615850e-47 |
Msa0758570 | Msa0829050 | 0.816243 | 6.114704e-52 | -8.615850e-47 |
Msa0758570 | Msa0832950 | 0.859612 | 3.667125e-63 | -8.615850e-47 |
Msa0758570 | Msa0838870 | 0.982814 | 4.530004e-156 | -8.615850e-47 |
Msa0758570 | Msa0840780 | 0.833986 | 3.891475e-56 | -8.615850e-47 |
Msa0758570 | Msa0843950 | 0.808654 | 2.784696e-50 | -8.615850e-47 |
Msa0758570 | Msa0859040 | 0.806307 | 8.764381e-50 | -8.615850e-47 |
Msa0758570 | Msa0865430 | 0.839119 | 1.916652e-57 | -8.615850e-47 |
Msa0758570 | Msa0867610 | 0.844258 | 8.451344e-59 | -8.615850e-47 |
Msa0758570 | Msa0874750 | 0.807813 | 4.207498e-50 | -8.615850e-47 |
Msa0758570 | Msa0895620 | 0.800197 | 1.613612e-48 | -8.615850e-47 |
Msa0758570 | Msa0925940 | 0.806413 | 8.327153e-50 | -8.615850e-47 |
Msa0758570 | Msa1003920 | 0.803403 | 3.543913e-49 | -8.615850e-47 |
Msa0758570 | Msa1016100 | 0.844547 | 7.068231e-59 | -8.615850e-47 |
Msa0758570 | Msa1026890 | 0.805792 | 1.124851e-49 | -8.615850e-47 |
Msa0758570 | Msa1027910 | 0.868601 | 5.782715e-66 | -8.615850e-47 |
Msa0758570 | Msa1030200 | 0.826952 | 2.045566e-54 | -8.615850e-47 |
Msa0758570 | Msa1030210 | 0.867980 | 9.171552e-66 | -8.615850e-47 |
Msa0758570 | Msa1030240 | 0.837524 | 4.940747e-57 | -8.615850e-47 |
Msa0758570 | Msa1035050 | 0.831968 | 1.235743e-55 | -8.615850e-47 |
Msa0758570 | Msa1057400 | 0.817111 | 3.905798e-52 | -8.615850e-47 |
Msa0758570 | Msa1059710 | 0.834041 | 3.768781e-56 | -8.615850e-47 |
Msa0758570 | Msa1069250 | 0.870077 | 1.916029e-66 | -8.615850e-47 |
Msa0758570 | Msa1071350 | 0.810233 | 1.276491e-50 | -8.615850e-47 |
Msa0758570 | Msa1075090 | 0.822186 | 2.710826e-53 | -8.615850e-47 |
Msa0758570 | Msa1077970 | 0.813998 | 1.927023e-51 | -8.615850e-47 |
Msa0758570 | Msa1084890 | 0.890016 | 1.441533e-73 | -8.615850e-47 |
Msa0758570 | Msa1095590 | 0.832426 | 9.520522e-56 | -8.615850e-47 |
Msa0758570 | Msa1102210 | 0.848969 | 4.367765e-60 | -8.615850e-47 |
Msa0758570 | Msa1110900 | 0.808061 | 3.726334e-50 | -8.615850e-47 |
Msa0758570 | Msa1115980 | 0.802534 | 5.360079e-49 | -8.615850e-47 |
Msa0758570 | Msa1120580 | 0.868936 | 4.507338e-66 | -8.615850e-47 |
Msa0758570 | Msa1120960 | 0.807968 | 3.899993e-50 | -8.615850e-47 |
Msa0758570 | Msa1131120 | 0.804778 | 1.834239e-49 | -8.615850e-47 |
Msa0758570 | Msa1132980 | 0.830805 | 2.388301e-55 | -8.615850e-47 |
Msa0758570 | Msa1136630 | 0.820740 | 5.847846e-53 | -8.615850e-47 |
Msa0758570 | Msa1136760 | 0.854976 | 8.593710e-62 | -8.615850e-47 |
Msa0758570 | Msa1142390 | 0.802369 | 5.796876e-49 | -8.615850e-47 |
Msa0758570 | Msa1157110 | 0.855026 | 8.313861e-62 | -8.615850e-47 |
Msa0758570 | Msa1174280 | 0.810010 | 1.425479e-50 | -8.615850e-47 |
Msa0758570 | Msa1180430 | 0.838296 | 3.128618e-57 | -8.615850e-47 |
Msa0758570 | Msa1186150 | 0.823904 | 1.077424e-53 | -8.615850e-47 |
Msa0758570 | Msa1187490 | 0.801164 | 1.024479e-48 | -8.615850e-47 |
Msa0758570 | Msa1202110 | 0.807903 | 4.025785e-50 | -8.615850e-47 |
Msa0758570 | Msa1203810 | 0.806768 | 7.005306e-50 | -8.615850e-47 |
Msa0758570 | Msa1211610 | 0.830662 | 2.587960e-55 | -8.615850e-47 |
Msa0758570 | Msa1231980 | 0.829483 | 5.019521e-55 | -8.615850e-47 |
Msa0758570 | Msa1254870 | 0.806913 | 6.529207e-50 | -8.615850e-47 |
Msa0758570 | Msa1280960 | 0.843701 | 1.192086e-58 | -8.615850e-47 |
Msa0758570 | Msa1296240 | 0.809207 | 2.120413e-50 | -8.615850e-47 |
Msa0758570 | Msa1299480 | 0.816270 | 6.030478e-52 | -8.615850e-47 |
Msa0758570 | Msa1303400 | 0.812095 | 5.036330e-51 | -8.615850e-47 |
Msa0758570 | Msa1320160 | 0.820515 | 6.584236e-53 | -8.615850e-47 |
Msa0758570 | Msa1328430 | 0.806817 | 6.841948e-50 | -8.615850e-47 |
Msa0758570 | Msa1356130 | 0.847474 | 1.130417e-59 | -8.615850e-47 |
Msa0758570 | Msa1390200 | 0.803503 | 3.379512e-49 | -8.615850e-47 |
Msa0758570 | Msa1395110 | 0.810525 | 1.103659e-50 | -8.615850e-47 |
Msa0758570 | Msa1395250 | 0.852488 | 4.468526e-61 | -8.615850e-47 |
Msa0758570 | Msa1398140 | 0.856188 | 3.808342e-62 | -8.615850e-47 |
Msa0758570 | Msa1405500 | 0.823410 | 1.406206e-53 | -8.615850e-47 |
Msa0758570 | Msa1413800 | 0.808890 | 2.479945e-50 | -8.615850e-47 |
Msa0758570 | Msa1427000 | 0.834879 | 2.321607e-56 | -8.615850e-47 |
Msa0758570 | Msa1435320 | 0.846108 | 2.670695e-59 | -8.615850e-47 |
Msa0758570 | Msa1436090 | 0.809353 | 1.973647e-50 | -8.615850e-47 |
Msa0758570 | Msa1438160 | 0.803970 | 2.702786e-49 | -8.615850e-47 |
Msa0758570 | Msa1439780 | 0.843934 | 1.032094e-58 | -8.615850e-47 |
Msa0758570 | Msa1443400 | 0.846364 | 2.274975e-59 | -8.615850e-47 |
Msa0758570 | Msa1447870 | 0.808043 | 3.759084e-50 | -8.615850e-47 |
Msa0758570 | Msa1447880 | 0.809444 | 1.886747e-50 | -8.615850e-47 |
Msa0758570 | Msa1448040 | 0.845838 | 3.163693e-59 | -8.615850e-47 |
Msa0758570 | Msa1455200 | 0.841439 | 4.749238e-58 | -8.615850e-47 |
Msa0126430 | Msa0758570 | 0.852645 | 4.029813e-61 | -8.615850e-47 |
Msa0129770 | Msa0758570 | 0.840268 | 9.632752e-58 | -8.615850e-47 |
Msa0137560 | Msa0758570 | 0.807317 | 5.362802e-50 | -8.615850e-47 |
Msa0143640 | Msa0758570 | 0.825573 | 4.355403e-54 | -8.615850e-47 |
Msa0150620 | Msa0758570 | 0.830388 | 3.021373e-55 | -8.615850e-47 |
Msa0161560 | Msa0758570 | 0.849965 | 2.303708e-60 | -8.615850e-47 |
Msa0162680 | Msa0758570 | 0.813935 | 1.989743e-51 | -8.615850e-47 |
Msa0164250 | Msa0758570 | 0.842491 | 2.504146e-58 | -8.615850e-47 |
Msa0185040 | Msa0758570 | 0.814920 | 1.205030e-51 | -8.615850e-47 |
Msa0185100 | Msa0758570 | 0.857878 | 1.208779e-62 | -8.615850e-47 |
Msa0186240 | Msa0758570 | 0.820076 | 8.301475e-53 | -8.615850e-47 |
Msa0193190 | Msa0758570 | 0.862458 | 4.996465e-64 | -8.615850e-47 |
Msa0204170 | Msa0758570 | 0.809924 | 1.487290e-50 | -8.615850e-47 |
Msa0218090 | Msa0758570 | 0.858478 | 8.013449e-63 | -8.615850e-47 |
Msa0234740 | Msa0758570 | 0.837979 | 3.775037e-57 | -8.615850e-47 |
Msa0367860 | Msa0758570 | 0.804324 | 2.281393e-49 | -8.615850e-47 |
Msa0383900 | Msa0758570 | 0.835459 | 1.657874e-56 | -8.615850e-47 |
Msa0388070 | Msa0758570 | 0.801082 | 1.064702e-48 | -8.615850e-47 |
Msa0390200 | Msa0758570 | 0.839405 | 1.615707e-57 | -8.615850e-47 |
Msa0393100 | Msa0758570 | 0.836130 | 1.120926e-56 | -8.615850e-47 |
Msa0397180 | Msa0758570 | 0.818198 | 2.221326e-52 | -8.615850e-47 |
Msa0397200 | Msa0758570 | 0.808699 | 2.723553e-50 | -8.615850e-47 |
Msa0405210 | Msa0758570 | 0.808953 | 2.403869e-50 | -8.615850e-47 |
Msa0415640 | Msa0758570 | 0.803363 | 3.612962e-49 | -8.615850e-47 |
Msa0422740 | Msa0758570 | 0.800717 | 1.264163e-48 | -8.615850e-47 |
Msa0434300 | Msa0758570 | 0.830483 | 2.862595e-55 | -8.615850e-47 |
Msa0434400 | Msa0758570 | 0.841500 | 4.576756e-58 | -8.615850e-47 |
Msa0449490 | Msa0758570 | 0.811423 | 7.053688e-51 | -8.615850e-47 |
Msa0460600 | Msa0758570 | 0.850164 | 2.026887e-60 | -8.615850e-47 |
Msa0476770 | Msa0758570 | 0.835220 | 1.905221e-56 | -8.615850e-47 |
Msa0478080 | Msa0758570 | 0.807683 | 4.484850e-50 | -8.615850e-47 |
Msa0247470 | Msa0758570 | 0.822376 | 2.448550e-53 | -8.615850e-47 |
Msa0253960 | Msa0758570 | 0.819190 | 1.322891e-52 | -8.615850e-47 |
Msa0257760 | Msa0758570 | 0.821823 | 3.289059e-53 | -8.615850e-47 |
Msa0257900 | Msa0758570 | 0.819573 | 1.081871e-52 | -8.615850e-47 |
Msa0271700 | Msa0758570 | 0.815349 | 9.675848e-52 | -8.615850e-47 |
Msa0271720 | Msa0758570 | 0.816550 | 5.220792e-52 | -8.615850e-47 |
Msa0273070 | Msa0758570 | 0.869388 | 3.214792e-66 | -8.615850e-47 |
Msa0275730 | Msa0758570 | 0.826052 | 3.350894e-54 | -8.615850e-47 |
Msa0296900 | Msa0758570 | 0.813393 | 2.618535e-51 | -8.615850e-47 |
Msa0296910 | Msa0758570 | 0.806807 | 6.874107e-50 | -8.615850e-47 |
Msa0306310 | Msa0758570 | 0.851494 | 8.555795e-61 | -8.615850e-47 |
Msa0324840 | Msa0758570 | 0.810748 | 9.879566e-51 | -8.615850e-47 |
Msa0335070 | Msa0758570 | 0.819020 | 1.446011e-52 | -8.615850e-47 |
Msa0335080 | Msa0758570 | 0.831044 | 2.086302e-55 | -8.615850e-47 |
Msa0345890 | Msa0758570 | 0.859063 | 5.357655e-63 | -8.615850e-47 |
Msa0345980 | Msa0758570 | 0.835806 | 1.354347e-56 | -8.615850e-47 |
Msa0488580 | Msa0758570 | 0.823069 | 1.688780e-53 | -8.615850e-47 |
Msa0488660 | Msa0758570 | 0.811628 | 6.365485e-51 | -8.615850e-47 |
Msa0493870 | Msa0758570 | 0.801523 | 8.651732e-49 | -8.615850e-47 |
Msa0497120 | Msa0758570 | 0.815318 | 9.832386e-52 | -8.615850e-47 |
Msa0497690 | Msa0758570 | 0.838313 | 3.096560e-57 | -8.615850e-47 |
Msa0510870 | Msa0758570 | 0.801358 | 9.351817e-49 | -8.615850e-47 |
Msa0522140 | Msa0758570 | 0.825772 | 3.905362e-54 | -8.615850e-47 |
Msa0522170 | Msa0758570 | 0.826636 | 2.433283e-54 | -8.615850e-47 |
Msa0534270 | Msa0758570 | 0.800705 | 1.271692e-48 | -8.615850e-47 |
Msa0534610 | Msa0758570 | 0.833265 | 5.891120e-56 | -8.615850e-47 |
Msa0536540 | Msa0758570 | 0.810718 | 1.002657e-50 | -8.615850e-47 |
Msa0556270 | Msa0758570 | 0.841510 | 4.549345e-58 | -8.615850e-47 |
Msa0557240 | Msa0758570 | 0.869179 | 3.757937e-66 | -8.615850e-47 |
Msa0561830 | Msa0758570 | 0.803824 | 2.898831e-49 | -8.615850e-47 |
Msa0565120 | Msa0758570 | 0.800476 | 1.415810e-48 | -8.615850e-47 |
Msa0566530 | Msa0758570 | 0.849749 | 2.647423e-60 | -8.615850e-47 |
Msa0578960 | Msa0758570 | 0.829296 | 5.572302e-55 | -8.615850e-47 |
Msa0580840 | Msa0758570 | 0.814436 | 1.542329e-51 | -8.615850e-47 |
Msa0590810 | Msa0758570 | 0.831335 | 1.769557e-55 | -8.615850e-47 |
Msa0592650 | Msa0758570 | 0.807166 | 5.773208e-50 | -8.615850e-47 |
Msa0592660 | Msa0758570 | 0.846781 | 1.750170e-59 | -8.615850e-47 |
Msa0594250 | Msa0758570 | 0.817234 | 3.664715e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758570 | MtrunA17_Chr5g0406681 | 96.329 | 572 | 19 | 1 | 1 | 572 | 6 | 575 | 0.0 | 1132 |
Msa0758570 | MtrunA17_Chr5g0396311 | 48.270 | 549 | 269 | 9 | 23 | 566 | 2 | 540 | 1.49e-180 | 520 |
Msa0758570 | MtrunA17_Chr5g0396331 | 46.789 | 545 | 275 | 8 | 26 | 566 | 5 | 538 | 6.89e-176 | 508 |
Msa0758570 | MtrunA17_Chr8g0370701 | 47.187 | 551 | 274 | 9 | 23 | 566 | 44 | 584 | 5.24e-174 | 506 |
Msa0758570 | MtrunA17_Chr4g0068151 | 42.171 | 562 | 300 | 10 | 23 | 566 | 5 | 559 | 9.02e-150 | 442 |
Msa0758570 | MtrunA17_Chr8g0370731 | 47.510 | 482 | 242 | 6 | 90 | 566 | 20 | 495 | 1.81e-149 | 440 |
Msa0758570 | MtrunA17_Chr2g0301671 | 40.636 | 566 | 311 | 10 | 19 | 566 | 1 | 559 | 9.11e-147 | 434 |
Msa0758570 | MtrunA17_Chr5g0433241 | 41.187 | 556 | 305 | 11 | 24 | 566 | 2 | 548 | 1.40e-144 | 429 |
Msa0758570 | MtrunA17_Chr3g0109731 | 40.860 | 558 | 303 | 11 | 24 | 563 | 3 | 551 | 1.48e-139 | 417 |
Msa0758570 | MtrunA17_Chr5g0433231 | 42.908 | 557 | 295 | 12 | 24 | 566 | 2 | 549 | 2.08e-135 | 405 |
Msa0758570 | MtrunA17_Chr5g0433221 | 42.936 | 545 | 288 | 12 | 36 | 566 | 14 | 549 | 3.76e-131 | 394 |
Msa0758570 | MtrunA17_Chr6g0471311 | 42.960 | 554 | 291 | 11 | 29 | 566 | 7 | 551 | 1.05e-130 | 394 |
Msa0758570 | MtrunA17_Chr5g0395431 | 25.540 | 556 | 354 | 20 | 32 | 564 | 67 | 585 | 1.29e-32 | 132 |
Msa0758570 | MtrunA17_Chr3g0102411 | 25.224 | 559 | 357 | 20 | 28 | 562 | 16 | 537 | 1.29e-32 | 132 |
Msa0758570 | MtrunA17_Chr4g0039791 | 25.933 | 509 | 327 | 16 | 74 | 564 | 83 | 559 | 1.52e-31 | 129 |
Msa0758570 | MtrunA17_Chr1g0157401 | 23.576 | 509 | 348 | 12 | 62 | 555 | 67 | 549 | 1.58e-31 | 129 |
Msa0758570 | MtrunA17_Chr8g0353341 | 26.113 | 494 | 309 | 18 | 62 | 530 | 64 | 526 | 5.18e-30 | 124 |
Msa0758570 | MtrunA17_Chr2g0327341 | 25.283 | 530 | 358 | 17 | 36 | 555 | 27 | 528 | 2.01e-28 | 119 |
Msa0758570 | MtrunA17_Chr4g0000461 | 25.131 | 573 | 364 | 21 | 20 | 564 | 5 | 540 | 7.84e-28 | 117 |
Msa0758570 | MtrunA17_Chr4g0028411 | 24.248 | 532 | 364 | 17 | 36 | 555 | 27 | 531 | 1.53e-27 | 116 |
Msa0758570 | MtrunA17_Chr5g0409791 | 25.676 | 518 | 327 | 18 | 74 | 564 | 80 | 566 | 1.65e-27 | 117 |
Msa0758570 | MtrunA17_Chr1g0180541 | 23.881 | 536 | 366 | 16 | 36 | 555 | 28 | 537 | 1.55e-25 | 110 |
Msa0758570 | MtrunA17_Chr5g0409771 | 26.275 | 510 | 322 | 22 | 74 | 564 | 79 | 553 | 1.64e-24 | 107 |
Msa0758570 | MtrunA17_Chr4g0072561 | 22.928 | 567 | 376 | 18 | 10 | 553 | 7 | 535 | 8.68e-24 | 105 |
Msa0758570 | MtrunA17_Chr1g0180551 | 24.176 | 546 | 356 | 20 | 36 | 555 | 97 | 610 | 3.35e-23 | 103 |
Msa0758570 | MtrunA17_Chr1g0197391 | 24.663 | 519 | 328 | 19 | 58 | 555 | 79 | 555 | 6.85e-23 | 102 |
Msa0758570 | MtrunA17_Chr6g0471921 | 22.000 | 550 | 365 | 14 | 37 | 564 | 6 | 513 | 3.10e-21 | 97.4 |
Msa0758570 | MtrunA17_Chr2g0292471 | 23.818 | 592 | 338 | 22 | 42 | 564 | 8 | 555 | 4.38e-21 | 97.1 |
Msa0758570 | MtrunA17_Chr3g0116251 | 23.370 | 368 | 245 | 12 | 204 | 555 | 199 | 545 | 2.19e-18 | 88.6 |
Msa0758570 | MtrunA17_Chr4g0034181 | 21.926 | 488 | 304 | 17 | 64 | 492 | 79 | 548 | 3.91e-17 | 85.1 |
Msa0758570 | MtrunA17_Chr1g0186071 | 24.063 | 507 | 329 | 16 | 62 | 555 | 82 | 545 | 6.99e-17 | 84.0 |
Msa0758570 | MtrunA17_Chr3g0116271 | 22.642 | 371 | 247 | 12 | 204 | 555 | 198 | 547 | 2.77e-16 | 82.0 |
Msa0758570 | MtrunA17_Chr2g0334131 | 29.104 | 268 | 173 | 9 | 303 | 564 | 26 | 282 | 8.07e-16 | 78.2 |
Msa0758570 | MtrunA17_Chr5g0396711 | 23.092 | 511 | 293 | 20 | 55 | 492 | 68 | 551 | 1.14e-14 | 77.0 |
Msa0758570 | MtrunA17_Chr8g0388081 | 23.576 | 509 | 295 | 21 | 54 | 492 | 6 | 490 | 1.50e-14 | 76.6 |
Msa0758570 | MtrunA17_Chr5g0396691 | 24.466 | 515 | 281 | 23 | 55 | 492 | 68 | 551 | 6.07e-14 | 74.7 |
Msa0758570 | MtrunA17_Chr7g0252691 | 25.393 | 382 | 236 | 14 | 207 | 560 | 361 | 721 | 6.64e-14 | 74.7 |
Msa0758570 | MtrunA17_Chr1g0194371 | 33.793 | 145 | 86 | 4 | 349 | 492 | 415 | 550 | 7.55e-14 | 74.7 |
Msa0758570 | MtrunA17_Chr7g0270221 | 27.551 | 196 | 130 | 4 | 300 | 492 | 324 | 510 | 9.09e-14 | 74.3 |
Msa0758570 | MtrunA17_Chr1g0157431 | 23.864 | 264 | 181 | 6 | 62 | 317 | 67 | 318 | 1.24e-12 | 70.5 |
Msa0758570 | MtrunA17_Chr1g0162621 | 28.481 | 158 | 91 | 6 | 342 | 492 | 408 | 550 | 1.72e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0758570 | AT1G20560.1 | 46.703 | 546 | 273 | 8 | 29 | 565 | 9 | 545 | 2.14e-175 | 508 |
Msa0758570 | AT2G17650.1 | 46.461 | 551 | 267 | 10 | 35 | 566 | 60 | 601 | 2.33e-162 | 476 |
Msa0758570 | AT5G16340.1 | 41.727 | 556 | 300 | 10 | 23 | 566 | 2 | 545 | 2.22e-144 | 428 |
Msa0758570 | AT1G76290.1 | 42.572 | 552 | 296 | 11 | 23 | 567 | 2 | 539 | 3.09e-143 | 425 |
Msa0758570 | AT3G16910.1 | 41.273 | 550 | 295 | 10 | 36 | 566 | 22 | 562 | 6.46e-143 | 425 |
Msa0758570 | AT5G16370.1 | 41.367 | 556 | 302 | 10 | 23 | 566 | 2 | 545 | 4.41e-142 | 422 |
Msa0758570 | AT1G20560.2 | 45.243 | 473 | 242 | 7 | 102 | 565 | 3 | 467 | 5.71e-142 | 419 |
Msa0758570 | AT1G66120.1 | 41.622 | 555 | 302 | 13 | 24 | 565 | 3 | 548 | 4.08e-139 | 416 |
Msa0758570 | AT1G75960.1 | 41.273 | 550 | 298 | 10 | 29 | 565 | 7 | 544 | 1.07e-135 | 406 |
Msa0758570 | AT1G21540.1 | 40.625 | 544 | 303 | 11 | 35 | 565 | 13 | 549 | 8.89e-134 | 401 |
Msa0758570 | AT1G21530.2 | 39.706 | 544 | 307 | 11 | 35 | 565 | 13 | 548 | 8.50e-133 | 399 |
Msa0758570 | AT1G65890.1 | 38.324 | 561 | 320 | 9 | 24 | 565 | 2 | 555 | 6.78e-132 | 397 |
Msa0758570 | AT1G65880.1 | 38.938 | 565 | 311 | 11 | 24 | 565 | 3 | 556 | 4.65e-131 | 395 |
Msa0758570 | AT1G21530.1 | 39.706 | 544 | 305 | 12 | 35 | 565 | 13 | 546 | 1.33e-130 | 393 |
Msa0758570 | AT1G77240.1 | 39.114 | 542 | 309 | 12 | 35 | 565 | 13 | 544 | 2.56e-128 | 387 |
Msa0758570 | AT1G68270.1 | 35.149 | 569 | 311 | 12 | 24 | 572 | 2 | 532 | 2.49e-106 | 330 |
Msa0758570 | AT3G21240.1 | 25.483 | 518 | 337 | 18 | 63 | 562 | 64 | 550 | 1.21e-29 | 123 |
Msa0758570 | AT1G65060.1 | 25.594 | 547 | 359 | 18 | 32 | 564 | 46 | 558 | 8.81e-29 | 120 |
Msa0758570 | AT5G63380.1 | 28.177 | 362 | 234 | 13 | 204 | 555 | 202 | 547 | 1.33e-27 | 117 |
Msa0758570 | AT1G20510.1 | 25.179 | 560 | 369 | 19 | 29 | 571 | 19 | 545 | 2.11e-27 | 116 |
Msa0758570 | AT4G05160.1 | 25.636 | 550 | 348 | 19 | 39 | 564 | 30 | 542 | 3.44e-27 | 116 |
Msa0758570 | AT3G21240.2 | 26.174 | 447 | 286 | 16 | 63 | 492 | 64 | 483 | 2.21e-26 | 113 |
Msa0758570 | AT3G21240.3 | 26.174 | 447 | 286 | 16 | 63 | 492 | 64 | 483 | 2.21e-26 | 113 |
Msa0758570 | AT1G20480.1 | 25.090 | 554 | 353 | 20 | 29 | 555 | 36 | 554 | 1.56e-25 | 111 |
Msa0758570 | AT1G51680.1 | 25.912 | 521 | 341 | 19 | 60 | 562 | 64 | 557 | 2.42e-25 | 110 |
Msa0758570 | AT1G20500.1 | 26.572 | 493 | 306 | 19 | 82 | 555 | 84 | 539 | 3.32e-25 | 110 |
Msa0758570 | AT1G62940.1 | 23.774 | 530 | 343 | 15 | 54 | 565 | 53 | 539 | 3.67e-25 | 110 |
Msa0758570 | AT1G51680.3 | 26.273 | 491 | 318 | 18 | 60 | 533 | 64 | 527 | 8.87e-25 | 108 |
Msa0758570 | AT4G19010.1 | 24.603 | 504 | 321 | 21 | 82 | 565 | 93 | 557 | 6.35e-24 | 106 |
Msa0758570 | AT1G51680.2 | 26.667 | 450 | 290 | 16 | 60 | 492 | 64 | 490 | 2.52e-23 | 103 |
Msa0758570 | AT5G38120.1 | 25.414 | 543 | 345 | 19 | 45 | 565 | 46 | 550 | 3.67e-23 | 103 |
Msa0758570 | AT3G21230.1 | 25.179 | 560 | 361 | 19 | 32 | 565 | 40 | 567 | 5.33e-23 | 103 |
Msa0758570 | AT1G20510.2 | 25.470 | 479 | 316 | 16 | 29 | 491 | 19 | 472 | 9.26e-23 | 102 |
Msa0758570 | AT1G30520.2 | 24.339 | 567 | 357 | 18 | 42 | 564 | 13 | 551 | 2.05e-22 | 101 |
Msa0758570 | AT1G30520.1 | 24.339 | 567 | 357 | 18 | 42 | 564 | 13 | 551 | 2.05e-22 | 101 |
Msa0758570 | AT3G21230.3 | 25.524 | 525 | 334 | 18 | 32 | 531 | 40 | 532 | 1.04e-21 | 99.4 |
Msa0758570 | AT3G48990.1 | 24.286 | 560 | 328 | 19 | 41 | 562 | 9 | 510 | 1.11e-21 | 99.0 |
Msa0758570 | AT5G38120.3 | 25.247 | 507 | 321 | 17 | 45 | 531 | 46 | 514 | 1.67e-21 | 98.6 |
Msa0758570 | AT5G38120.4 | 25.696 | 467 | 293 | 16 | 45 | 491 | 46 | 478 | 1.38e-20 | 95.5 |
Msa0758570 | AT5G38120.2 | 25.696 | 467 | 293 | 16 | 45 | 491 | 46 | 478 | 1.38e-20 | 95.5 |
Msa0758570 | AT2G47240.4 | 24.330 | 485 | 298 | 14 | 64 | 492 | 19 | 490 | 2.49e-20 | 95.5 |
Msa0758570 | AT2G47240.1 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 3.45e-20 | 95.1 |
Msa0758570 | AT2G47240.2 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 3.45e-20 | 95.1 |
Msa0758570 | AT2G47240.3 | 24.330 | 485 | 298 | 14 | 64 | 492 | 78 | 549 | 3.45e-20 | 95.1 |
Msa0758570 | AT3G21230.2 | 25.720 | 486 | 308 | 17 | 32 | 492 | 40 | 497 | 8.53e-19 | 90.1 |
Msa0758570 | AT1G20510.3 | 24.524 | 473 | 309 | 18 | 29 | 478 | 19 | 466 | 7.40e-17 | 84.0 |
Msa0758570 | AT4G11030.1 | 22.863 | 503 | 291 | 21 | 60 | 492 | 77 | 552 | 5.32e-13 | 72.4 |
Find 121 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACACTCTTCATTGTATT+TGG | 0.117189 | 5_2:+13863136 | None:intergenic |
TATCATGCAAACCACTAATT+TGG | 0.179668 | 5_2:+13862372 | None:intergenic |
CTGAATTATGTTGATCAAAA+AGG | 0.196037 | 5_2:-13863199 | Msa0758570:CDS |
AAAAGATATTATTTATTCTA+AGG | 0.210086 | 5_2:-13862945 | Msa0758570:CDS |
TTCCACTTTCTTACAATAAC+TGG | 0.223827 | 5_2:+13863250 | None:intergenic |
GCACACTATGAACTTCATTT+TGG | 0.224185 | 5_2:-13864027 | Msa0758570:CDS |
TGATTATAAACTGCTCCTTT+TGG | 0.243384 | 5_2:+13863661 | None:intergenic |
AAGAAGTTCATCGTATATTA+AGG | 0.246952 | 5_2:+13863774 | None:intergenic |
GATCTTGTATTAGGACAATA+AGG | 0.256872 | 5_2:+13863830 | None:intergenic |
TTGCAAACTGTGACATTATT+AGG | 0.258350 | 5_2:-13863396 | Msa0758570:CDS |
TCATAGTGTGCTGGAGTATT+TGG | 0.268936 | 5_2:+13864039 | None:intergenic |
ATAGGTGAAATCATGTTTAA+AGG | 0.270805 | 5_2:-13863097 | Msa0758570:CDS |
GGCGTGTGGTTTGTAGGATT+TGG | 0.271601 | 5_2:-13862602 | Msa0758570:three_prime_UTR |
AAAATATTAAGCTAGATATA+TGG | 0.273957 | 5_2:+13862504 | None:intergenic |
CTTGGATTTGATGTTAATAT+TGG | 0.274603 | 5_2:-13863298 | Msa0758570:CDS |
ATAGGATCACATTCATTTCT+AGG | 0.276426 | 5_2:+13863718 | None:intergenic |
GTTGGCCATGATCTTGTATT+AGG | 0.280602 | 5_2:+13863821 | None:intergenic |
ACACAGTGGCTGCTCGTTCT+AGG | 0.291086 | 5_2:+13868486 | None:intergenic |
GGGGTGGCTTGAAATTTCTT+TGG | 0.296665 | 5_2:+13863851 | None:intergenic |
TCACCAAACACCACACTCTT+AGG | 0.297868 | 5_2:+13862713 | None:intergenic |
TAATAGTCGCGAGTGAATTA+AGG | 0.299417 | 5_2:+13863626 | None:intergenic |
GTGTGGTGCACCTACCCTTC+TGG | 0.311889 | 5_2:-13863425 | Msa0758570:CDS |
GGTAACGTCCTCACTGGTTC+TGG | 0.322386 | 5_2:+13868571 | None:intergenic |
AATTAAGGCGTGTGGTTTGT+AGG | 0.323598 | 5_2:-13862608 | Msa0758570:exon |
TCTCAACCTTGCTTCTGCTT+TGG | 0.326179 | 5_2:-13868393 | Msa0758570:CDS |
TAATTAGATTAGAGATTAAA+TGG | 0.328684 | 5_2:+13862445 | None:intergenic |
ATAAATAAAACAAGGCAAAA+TGG | 0.333767 | 5_2:-13862349 | Msa0758570:three_prime_UTR |
AGAGAAAATATTAAAAGTAT+TGG | 0.343101 | 5_2:-13862647 | Msa0758570:CDS |
GAGAAAATATTAAAAGTATT+GGG | 0.347029 | 5_2:-13862646 | Msa0758570:CDS |
AACTACACATCAGGCTCAAC+TGG | 0.349825 | 5_2:-13863688 | Msa0758570:CDS |
AACAACATTAGCATTAATAT+TGG | 0.350853 | 5_2:-13863953 | Msa0758570:CDS |
TGGTGTGACTCAAATAATTA+AGG | 0.354471 | 5_2:-13862623 | Msa0758570:exon |
TGAGTTTGTGAGTTCATTAG+AGG | 0.375347 | 5_2:-13862921 | Msa0758570:CDS |
GGGTGGCTTGAAATTTCTTT+GGG | 0.377898 | 5_2:+13863852 | None:intergenic |
GAGGTATATCTTTCACTAGT+TGG | 0.380173 | 5_2:+13863803 | None:intergenic |
TAGGTGAAATCATGTTTAAA+GGG | 0.386467 | 5_2:-13863096 | Msa0758570:CDS |
TGAAGCAATTCATGTTCATA+AGG | 0.387735 | 5_2:-13863458 | Msa0758570:CDS |
TTTGATGTTAATATTGGTTA+TGG | 0.391504 | 5_2:-13863292 | Msa0758570:CDS |
TTATAAACAGGTTGCAACTT+TGG | 0.394543 | 5_2:-13864064 | Msa0758570:intron |
AAAGGGAATACTTCAATGTC+AGG | 0.397558 | 5_2:-13863079 | Msa0758570:CDS |
ACCTTACCAGTTGAATTAAG+AGG | 0.398367 | 5_2:+13862686 | None:intergenic |
TTTAAACATGATTTCACCTA+TGG | 0.398368 | 5_2:+13863099 | None:intergenic |
AAGGTGAGTGTCACAGTTGC+TGG | 0.399927 | 5_2:-13863361 | Msa0758570:CDS |
ATGTTGTTGCATCTAGTTTG+AGG | 0.405861 | 5_2:+13863968 | None:intergenic |
GTCAACTTAGGAATTTCTAA+TGG | 0.406509 | 5_2:-13868371 | Msa0758570:CDS |
CTGCAGCAAAGCCAAATTAG+TGG | 0.408378 | 5_2:-13862383 | Msa0758570:three_prime_UTR |
ATACGATGAACTTCTTGAAA+AGG | 0.413737 | 5_2:-13863767 | Msa0758570:CDS |
TTCAAATTGAAAGAACCATT+AGG | 0.416142 | 5_2:+13862977 | None:intergenic |
GATTTGCCTCTTAATTCAAC+TGG | 0.421617 | 5_2:-13862692 | Msa0758570:CDS |
ATTTGGTTAATGCCTGCTCT+TGG | 0.425029 | 5_2:-13863529 | Msa0758570:CDS |
GCAATGGATGGTGTTTCATT+TGG | 0.447289 | 5_2:-13863546 | Msa0758570:CDS |
GCCTCTTAATTCAACTGGTA+AGG | 0.448931 | 5_2:-13862687 | Msa0758570:CDS |
TGATGATGGTGACGAGTGTT+TGG | 0.449095 | 5_2:-13862837 | Msa0758570:CDS |
GAACGAGCAGCCACTGTGTA+TGG | 0.449210 | 5_2:-13868482 | Msa0758570:CDS |
ATGAAGAGTGTTCCATATGA+TGG | 0.450784 | 5_2:-13863127 | Msa0758570:CDS |
CTTAACAAAGTGGCAGAGCT+TGG | 0.451298 | 5_2:-13863316 | Msa0758570:CDS |
AACATGATCATTGTAGATGA+TGG | 0.453182 | 5_2:+13868448 | None:intergenic |
AAATATTAAGCTAGATATAT+GGG | 0.457434 | 5_2:+13862505 | None:intergenic |
TGGTTCTGGCTCTGTACGGC+TGG | 0.457483 | 5_2:+13868585 | None:intergenic |
GCTTCTGCTTTGGTCAACTT+AGG | 0.458586 | 5_2:-13868383 | Msa0758570:CDS |
TGGTTAATGCCTGCTCTTGG+TGG | 0.459143 | 5_2:-13863526 | Msa0758570:CDS |
CTAGGTGTTAGGTTACCTAA+TGG | 0.459759 | 5_2:-13862992 | Msa0758570:CDS |
TATGGTATGACTGAAACATT+AGG | 0.461838 | 5_2:-13863274 | Msa0758570:CDS |
CAATCATGCAGTCTGCATAT+CGG | 0.463055 | 5_2:+13862419 | None:intergenic |
GGACTAGGGACCTAGGTGTT+AGG | 0.465511 | 5_2:-13863003 | Msa0758570:CDS |
GTTCCTAAGAGTGTGGTGTT+TGG | 0.467445 | 5_2:-13862716 | Msa0758570:CDS |
GTCCAGTTATTGTAAGAAAG+TGG | 0.471102 | 5_2:-13863252 | Msa0758570:CDS |
TACGATGAACTTCTTGAAAA+GGG | 0.473555 | 5_2:-13863766 | Msa0758570:CDS |
AGATCAATTAGATGCTCATA+TGG | 0.476810 | 5_2:-13862738 | Msa0758570:CDS |
AAGGTTGAGACATCTTTCAT+AGG | 0.478199 | 5_2:+13868406 | None:intergenic |
AAAGATATTATTTATTCTAA+GGG | 0.478681 | 5_2:-13862944 | Msa0758570:CDS |
AGGGGTTATTGACTTTATGA+TGG | 0.478800 | 5_2:-13863179 | Msa0758570:CDS |
GGGATGGTTGGTATAGGACT+AGG | 0.479682 | 5_2:-13863018 | Msa0758570:CDS |
ACAGCTACTTTCAAAACCAT+TGG | 0.487308 | 5_2:+13862875 | None:intergenic |
GGTGATGGTTGAATCAAAAT+CGG | 0.493513 | 5_2:-13862532 | Msa0758570:three_prime_UTR |
ATCTTGTATTAGGACAATAA+GGG | 0.496289 | 5_2:+13863831 | None:intergenic |
GTTTGTGAGTTCATTAGAGG+TGG | 0.501370 | 5_2:-13862918 | Msa0758570:CDS |
GATGTGTAGTTCACTGATAT+AGG | 0.502126 | 5_2:+13863700 | None:intergenic |
GACCTGGTTGAGTGCTCTAA+AGG | 0.506891 | 5_2:-13868539 | Msa0758570:CDS |
GCAATAATTTCCAGAAGGGT+AGG | 0.508940 | 5_2:+13863415 | None:intergenic |
GGCTCAACTGGAATTCCAAA+AGG | 0.522211 | 5_2:-13863676 | Msa0758570:CDS |
GCAATTGTGAAATTGAAAGA+TGG | 0.524748 | 5_2:-13862800 | Msa0758570:CDS |
GTTGACATGTTTAGATGCAA+TGG | 0.528978 | 5_2:-13863562 | Msa0758570:CDS |
ATATCAGTGAACTACACATC+AGG | 0.529465 | 5_2:-13863697 | Msa0758570:CDS |
TTTCGATGTGAATCCTATGC+TGG | 0.531354 | 5_2:-13863599 | Msa0758570:CDS |
ATGTTTGTGCCACCAAGAGC+AGG | 0.540220 | 5_2:+13863517 | None:intergenic |
ATTCAAAATTCTTAACAAAG+TGG | 0.541410 | 5_2:-13863326 | Msa0758570:CDS |
GAAATAATAGCACCTGCCAT+TGG | 0.541429 | 5_2:+13864000 | None:intergenic |
ATTGTCCTAATACAAGATCA+TGG | 0.544219 | 5_2:-13863826 | Msa0758570:CDS |
CTCAACCAGGTCTTGTGTCA+TGG | 0.545213 | 5_2:+13868550 | None:intergenic |
TGTCATGGTAACGTCCTCAC+TGG | 0.549143 | 5_2:+13868565 | None:intergenic |
AAATGAAGTTCATAGTGTGC+TGG | 0.549199 | 5_2:+13864030 | None:intergenic |
TCAACCATCACCGATGTATG+TGG | 0.558843 | 5_2:+13862543 | None:intergenic |
AGGAAACTGATCGGTGTCAA+AGG | 0.571406 | 5_2:+13868506 | None:intergenic |
GTTTGCAATAATTTCCAGAA+GGG | 0.591302 | 5_2:+13863411 | None:intergenic |
AACCTTTAGAGCACTCAACC+AGG | 0.592689 | 5_2:+13868537 | None:intergenic |
CGTTACCATGACACAAGACC+TGG | 0.596346 | 5_2:-13868555 | Msa0758570:CDS |
TTCAATTTCACAATTGCACA+AGG | 0.596592 | 5_2:+13862806 | None:intergenic |
TCACTGGTTCTGGCTCTGTA+CGG | 0.596684 | 5_2:+13868581 | None:intergenic |
TCGTATATTAAGGTATCTTG+AGG | 0.597008 | 5_2:+13863784 | None:intergenic |
AAGGGAATACTTCAATGTCA+GGG | 0.598415 | 5_2:-13863078 | Msa0758570:CDS |
AGTTTGCAATAATTTCCAGA+AGG | 0.600004 | 5_2:+13863410 | None:intergenic |
TGGTATAGGACTAGGGACCT+AGG | 0.607960 | 5_2:-13863010 | Msa0758570:CDS |
CATTAGGTAACCTAACACCT+AGG | 0.611239 | 5_2:+13862993 | None:intergenic |
CAGTCCACATACATCGGTGA+TGG | 0.617044 | 5_2:-13862547 | Msa0758570:three_prime_UTR |
AGCCACTGTGTATGGTGACA+AGG | 0.623725 | 5_2:-13868474 | Msa0758570:CDS |
ACTCAAATAATTAAGGCGTG+TGG | 0.623877 | 5_2:-13862616 | Msa0758570:exon |
TTCATGCAGTCCACATACAT+CGG | 0.634071 | 5_2:-13862553 | Msa0758570:three_prime_UTR |
GTGGGGAGATATGATGATGA+TGG | 0.634328 | 5_2:-13862851 | Msa0758570:CDS |
GCATGATAATAAATAAAACA+AGG | 0.639387 | 5_2:-13862357 | Msa0758570:three_prime_UTR |
TCTTGTATTAGGACAATAAG+GGG | 0.643394 | 5_2:+13863832 | None:intergenic |
AGTTGACCAAAGCAGAAGCA+AGG | 0.644972 | 5_2:+13868387 | None:intergenic |
GGATGGTTGGTATAGGACTA+GGG | 0.648496 | 5_2:-13863017 | Msa0758570:CDS |
GCTCGTTCTAGGAAACTGAT+CGG | 0.653949 | 5_2:+13868497 | None:intergenic |
ACATGTTTAGATGCAATGGA+TGG | 0.657007 | 5_2:-13863558 | Msa0758570:CDS |
AAAATATTAAAAGTATTGGG+TGG | 0.659131 | 5_2:-13862643 | Msa0758570:CDS |
TGTATTAGGACAATAAGGGG+TGG | 0.669864 | 5_2:+13863835 | None:intergenic |
CATAAGGTAACACATTTGTG+TGG | 0.685677 | 5_2:-13863442 | Msa0758570:CDS |
TCATATGGTTCCTAAGAGTG+TGG | 0.716052 | 5_2:-13862723 | Msa0758570:CDS |
GTACAGAGCCAGAACCAGTG+AGG | 0.747570 | 5_2:-13868579 | Msa0758570:CDS |
AACCTTGTCACCATACACAG+TGG | 0.766651 | 5_2:+13868472 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTTAATATTTATAATTA+GGG | + | chr5_2:13863549-13863568 | None:intergenic | 0.0% |
!!! | TATAAATAGAAATTTTATCT+TGG | + | chr5_2:13863692-13863711 | None:intergenic | 10.0% |
!! | TTATATCGTTAAAAATAAAA+AGG | - | chr5_2:13863894-13863913 | Msa0758570:CDS | 10.0% |
!!! | TTTTACATTTTTAATATGAA+CGG | + | chr5_2:13863943-13863962 | None:intergenic | 10.0% |
!! | TAAACAAATTAAAAAACTAA+GGG | - | chr5_2:13865118-13865137 | Msa0758570:intron | 10.0% |
!! | TTACAAAATACAATAAATTA+TGG | - | chr5_2:13865644-13865663 | Msa0758570:intron | 10.0% |
!!! | AATTTATTTTTTTTAAATGG+TGG | - | chr5_2:13865760-13865779 | Msa0758570:intron | 10.0% |
!!! | ATATGTTGTTATTTTTTTAT+TGG | + | chr5_2:13866204-13866223 | None:intergenic | 10.0% |
!! | AGAAGAATATTTAAATTATA+AGG | - | chr5_2:13866678-13866697 | Msa0758570:intron | 10.0% |
!! | TAATCAAAACATAAATTAAA+AGG | + | chr5_2:13866746-13866765 | None:intergenic | 10.0% |
!! | AAAAGATATTATTTATTCTA+AGG | - | chr5_2:13868010-13868029 | Msa0758570:intron | 10.0% |
!! | AAAGATATTATTTATTCTAA+GGG | - | chr5_2:13868011-13868030 | Msa0758570:intron | 10.0% |
!! | TTACATTGATACATTATATT+TGG | + | chr5_2:13862730-13862749 | None:intergenic | 15.0% |
!!! | AAATGTTTTTGTCTAAATTT+TGG | - | chr5_2:13862830-13862849 | Msa0758570:CDS | 15.0% |
!! | AAATAAAAACTTACTTCTTT+GGG | + | chr5_2:13863381-13863400 | None:intergenic | 15.0% |
!! | AAAATAAAAACTTACTTCTT+TGG | + | chr5_2:13863382-13863401 | None:intergenic | 15.0% |
!!! | GTAAGTTTTTATTTTTTTGA+AGG | - | chr5_2:13863387-13863406 | Msa0758570:CDS | 15.0% |
!!! | AGTAAGTTTTTATTAAAAAG+TGG | - | chr5_2:13863416-13863435 | Msa0758570:CDS | 15.0% |
!! | TAAAAAGAAAGAAAGTTTAT+CGG | + | chr5_2:13863824-13863843 | None:intergenic | 15.0% |
!!! | TGATTTAAAACATTCAAAAA+AGG | - | chr5_2:13864043-13864062 | Msa0758570:CDS | 15.0% |
!!! | ACGATATAATTTTACAAATT+TGG | + | chr5_2:13864178-13864197 | None:intergenic | 15.0% |
!!! | AATAACATGTTTTTTCTTAA+TGG | + | chr5_2:13864640-13864659 | None:intergenic | 15.0% |
!!! | TAATAACGTGTTTTTTTTAA+GGG | + | chr5_2:13864668-13864687 | None:intergenic | 15.0% |
!!! | TTAATAACGTGTTTTTTTTA+AGG | + | chr5_2:13864669-13864688 | None:intergenic | 15.0% |
!! | AAAAAAACACGTTATTAAAA+TGG | - | chr5_2:13864671-13864690 | Msa0758570:intron | 15.0% |
!! | AAAATAATAATAAATCTGTG+TGG | + | chr5_2:13864757-13864776 | None:intergenic | 15.0% |
!! | GTAAACAAATTAAAAAACTA+AGG | - | chr5_2:13865117-13865136 | Msa0758570:intron | 15.0% |
!! | CTTGTCAAAAAAAAAAAAAA+AGG | + | chr5_2:13865162-13865181 | None:intergenic | 15.0% |
!!! | ATATTTTAACAAAAAAGGAA+AGG | + | chr5_2:13865268-13865287 | None:intergenic | 15.0% |
!!! | AGTGTATATTTTAACAAAAA+AGG | + | chr5_2:13865273-13865292 | None:intergenic | 15.0% |
!!! | CTTGTTTCATATTTTTTATT+AGG | + | chr5_2:13865563-13865582 | None:intergenic | 15.0% |
!! | TAGTGCATATTTAATTATTA+AGG | - | chr5_2:13865839-13865858 | Msa0758570:intron | 15.0% |
!! | AGTGCATATTTAATTATTAA+GGG | - | chr5_2:13865840-13865859 | Msa0758570:intron | 15.0% |
!!! | AGTATAAATTTTTCTTTTCA+AGG | - | chr5_2:13865899-13865918 | Msa0758570:intron | 15.0% |
!! | TTATATAGTCATTTGATAAA+TGG | + | chr5_2:13866503-13866522 | None:intergenic | 15.0% |
!! | GAATATTTAAATTATAAGGT+TGG | - | chr5_2:13866682-13866701 | Msa0758570:intron | 15.0% |
!!! | TATAGGAAAAAAATTCTTTT+CGG | + | chr5_2:13866841-13866860 | None:intergenic | 15.0% |
!! | TAATATAAGAAAGAAAATTG+AGG | + | chr5_2:13866874-13866893 | None:intergenic | 15.0% |
!! | TTCTTTCTTATATTATAAAC+AGG | - | chr5_2:13866879-13866898 | Msa0758570:intron | 15.0% |
!!! | AGAGAAAATATTAAAAGTAT+TGG | - | chr5_2:13868308-13868327 | Msa0758570:intron | 15.0% |
!!! | GAGAAAATATTAAAAGTATT+GGG | - | chr5_2:13868309-13868328 | Msa0758570:intron | 15.0% |
!! | AAATATTAAGCTAGATATAT+GGG | + | chr5_2:13868453-13868472 | None:intergenic | 15.0% |
!! | AAAATATTAAGCTAGATATA+TGG | + | chr5_2:13868454-13868473 | None:intergenic | 15.0% |
!! | TAATTAGATTAGAGATTAAA+TGG | + | chr5_2:13868513-13868532 | None:intergenic | 15.0% |
!! | ATTGAAGAACATAATTCTAT+TGG | + | chr5_2:13862924-13862943 | None:intergenic | 20.0% |
!! | AATTAACTGGTTATTCTAAT+TGG | - | chr5_2:13862956-13862975 | Msa0758570:CDS | 20.0% |
!! | ATTAAATTTCACTGAATCAA+CGG | - | chr5_2:13863766-13863785 | Msa0758570:CDS | 20.0% |
!! | AAAATTATATCGTTACGAAA+AGG | - | chr5_2:13864185-13864204 | Msa0758570:intron | 20.0% |
!!! | TTCATATTTTTTTTTCCTTC+AGG | - | chr5_2:13864412-13864431 | Msa0758570:intron | 20.0% |
!!! | AAATAAAGTTTTTCAAAGAC+TGG | + | chr5_2:13864702-13864721 | None:intergenic | 20.0% |
!! | ATAAGGAGAAATAGAAAAAA+AGG | + | chr5_2:13865023-13865042 | None:intergenic | 20.0% |
!!! | TCTAATATATTTTGAATGAG+AGG | + | chr5_2:13865303-13865322 | None:intergenic | 20.0% |
!! | AAAAATAATCTAACACACTT+CGG | - | chr5_2:13865438-13865457 | Msa0758570:intron | 20.0% |
!!! | ATTTTTTATTAGGCTTTTCT+TGG | + | chr5_2:13865586-13865605 | None:intergenic | 20.0% |
!! | ATATTTAATTATTAAGGGAG+AGG | - | chr5_2:13865845-13865864 | Msa0758570:intron | 20.0% |
!! | TATTTAATTATTAAGGGAGA+GGG | - | chr5_2:13865846-13865865 | Msa0758570:intron | 20.0% |
!!! | TAAATTTTTCTTTTCAAGGA+TGG | - | chr5_2:13865903-13865922 | Msa0758570:intron | 20.0% |
!!! | AAATTTTTCTTTTCAAGGAT+GGG | - | chr5_2:13865904-13865923 | Msa0758570:intron | 20.0% |
!!! | TGTTGTTATTTTTTTATTGG+TGG | + | chr5_2:13866201-13866220 | None:intergenic | 20.0% |
!! | GAGGAATATAATAAAAAACT+TGG | - | chr5_2:13866354-13866373 | Msa0758570:intron | 20.0% |
!! | GAGAATACAAATTAATATAG+TGG | - | chr5_2:13866561-13866580 | Msa0758570:intron | 20.0% |
!! | AACAACATTAGCATTAATAT+TGG | - | chr5_2:13867002-13867021 | Msa0758570:intron | 20.0% |
!!! | TTGTTAAGAATTTTGAATGA+TGG | + | chr5_2:13867627-13867646 | None:intergenic | 20.0% |
!! | ATTCAAAATTCTTAACAAAG+TGG | - | chr5_2:13867629-13867648 | Msa0758570:intron | 20.0% |
!!! | TTTGATGTTAATATTGGTTA+TGG | - | chr5_2:13867663-13867682 | Msa0758570:intron | 20.0% |
!! | TGAATTATGTTGATCAAAAA+GGG | - | chr5_2:13867757-13867776 | Msa0758570:intron | 20.0% |
!!! | AAAATATTAAAAGTATTGGG+TGG | - | chr5_2:13868312-13868331 | Msa0758570:intron | 20.0% |
!! | GCATGATAATAAATAAAACA+AGG | - | chr5_2:13868598-13868617 | Msa0758570:CDS | 20.0% |
!! | ATAAATAAAACAAGGCAAAA+TGG | - | chr5_2:13868606-13868625 | Msa0758570:CDS | 20.0% |
!! | ATGATCATGTTAGATTTTCT+TGG | - | chr5_2:13862519-13862538 | Msa0758570:three_prime_UTR | 25.0% |
! | GAATTAATGTAGTCATCATA+GGG | + | chr5_2:13862641-13862660 | None:intergenic | 25.0% |
! | ATTATATTTGGTCATGAAGA+GGG | + | chr5_2:13862718-13862737 | None:intergenic | 25.0% |
! | GGTAAACTGTAACAAAATAT+TGG | + | chr5_2:13862903-13862922 | None:intergenic | 25.0% |
!!! | TTCTATCCATGGTTTTAAAT+TGG | - | chr5_2:13862995-13863014 | Msa0758570:CDS | 25.0% |
!! | TAATGACCAATTTAAAACCA+TGG | + | chr5_2:13863004-13863023 | None:intergenic | 25.0% |
! | GATGATTGAACTTGATTATT+GGG | - | chr5_2:13863067-13863086 | Msa0758570:CDS | 25.0% |
! | ATCGATTACACTAATCAATT+TGG | - | chr5_2:13863248-13863267 | Msa0758570:CDS | 25.0% |
! | ACGTAATTAGCAGTTAATTA+TGG | - | chr5_2:13863317-13863336 | Msa0758570:CDS | 25.0% |
! | TAAATAGTATTCCAGAGTAT+TGG | - | chr5_2:13863347-13863366 | Msa0758570:CDS | 25.0% |
!!! | ATAATTAGGGTCTTGTTAAT+CGG | + | chr5_2:13863536-13863555 | None:intergenic | 25.0% |
!!! | TCATGAAAACTTGTTTGTTT+TGG | + | chr5_2:13863623-13863642 | None:intergenic | 25.0% |
! | TTATCAATAGACCAAGTATT+TGG | - | chr5_2:13864357-13864376 | Msa0758570:intron | 25.0% |
! | CATTAGAATGTCTTCAATAT+GGG | - | chr5_2:13864727-13864746 | Msa0758570:intron | 25.0% |
! | TTCAGAAGAGAATGAAAATA+AGG | + | chr5_2:13865040-13865059 | None:intergenic | 25.0% |
! | AATTGTACACTATAGTAGAT+TGG | - | chr5_2:13865070-13865089 | Msa0758570:intron | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | + | chr5_2:13865960-13865979 | None:intergenic | 25.0% |
! | ATGTAATTCAAACATCTTTG+AGG | + | chr5_2:13865243-13865262 | None:intergenic | 25.0% |
!!! | TGTATTTCAAGTTTCTCTTA+GGG | + | chr5_2:13865344-13865363 | None:intergenic | 25.0% |
!!! | ATGTATTTCAAGTTTCTCTT+AGG | + | chr5_2:13865345-13865364 | None:intergenic | 25.0% |
!!! | TGTAGATTTTAACATAAGAG+GGG | + | chr5_2:13865374-13865393 | None:intergenic | 25.0% |
!!! | GTGTAGATTTTAACATAAGA+GGG | + | chr5_2:13865375-13865394 | None:intergenic | 25.0% |
!!! | AGTGTAGATTTTAACATAAG+AGG | + | chr5_2:13865376-13865395 | None:intergenic | 25.0% |
! | TTGTAATTCAAGCATCTTAT+AGG | - | chr5_2:13865869-13865888 | Msa0758570:intron | 25.0% |
! | TGTAATTCAAGCATCTTATA+GGG | - | chr5_2:13865870-13865889 | Msa0758570:intron | 25.0% |
!!! | AATTTTTCTTTTCAAGGATG+GGG | - | chr5_2:13865905-13865924 | Msa0758570:intron | 25.0% |
!!! | AGTGCATATTTTAACATAAG+AGG | - | chr5_2:13865928-13865947 | Msa0758570:intron | 25.0% |
!!! | GTGCATATTTTAACATAAGA+GGG | - | chr5_2:13865929-13865948 | Msa0758570:intron | 25.0% |
!!! | TGCATATTTTAACATAAGAG+GGG | - | chr5_2:13865930-13865949 | Msa0758570:intron | 25.0% |
! | TGTAATTCAAACATCTTTGA+GGG | - | chr5_2:13865960-13865979 | Msa0758570:intron | 25.0% |
! | TGCATGATATAATATATGCA+AGG | - | chr5_2:13866153-13866172 | Msa0758570:intron | 25.0% |
!!! | TGTTATTTTTTTATTGGTGG+TGG | + | chr5_2:13866198-13866217 | None:intergenic | 25.0% |
! | GAAAGATAATGCAATGAATA+TGG | + | chr5_2:13866279-13866298 | None:intergenic | 25.0% |
! | TATAGTCATTTGATAAATGG+AGG | + | chr5_2:13866500-13866519 | None:intergenic | 25.0% |
!! | AAATGTAGCTTGTCTAATTT+CGG | - | chr5_2:13866600-13866619 | Msa0758570:intron | 25.0% |
!!! | TGGAATTCCAAATTTTTCAA+AGG | - | chr5_2:13866702-13866721 | Msa0758570:intron | 25.0% |
!!! | GGAATTCCAAATTTTTCAAA+GGG | - | chr5_2:13866703-13866722 | Msa0758570:intron | 25.0% |
!!! | GAATTCCAAATTTTTCAAAG+GGG | - | chr5_2:13866704-13866723 | Msa0758570:intron | 25.0% |
! | GTTGGTTAGGTAAATTTATT+TGG | + | chr5_2:13866799-13866818 | None:intergenic | 25.0% |
! | TATAATGAGCAATTACATGT+TGG | + | chr5_2:13866817-13866836 | None:intergenic | 25.0% |
! | ATCTTGTATTAGGACAATAA+GGG | + | chr5_2:13867127-13867146 | None:intergenic | 25.0% |
! | AAGAAGTTCATCGTATATTA+AGG | + | chr5_2:13867184-13867203 | None:intergenic | 25.0% |
!! | TATTAGGCATTTTTCTCATA+AGG | - | chr5_2:13867575-13867594 | Msa0758570:intron | 25.0% |
! | CTTGGATTTGATGTTAATAT+TGG | - | chr5_2:13867657-13867676 | Msa0758570:intron | 25.0% |
! | CTGAATTATGTTGATCAAAA+AGG | - | chr5_2:13867756-13867775 | Msa0758570:intron | 25.0% |
! | GAATTATGTTGATCAAAAAG+GGG | - | chr5_2:13867758-13867777 | Msa0758570:intron | 25.0% |
! | TTTAAACATGATTTCACCTA+TGG | + | chr5_2:13867859-13867878 | None:intergenic | 25.0% |
! | ATAGGTGAAATCATGTTTAA+AGG | - | chr5_2:13867858-13867877 | Msa0758570:intron | 25.0% |
! | TAGGTGAAATCATGTTTAAA+GGG | - | chr5_2:13867859-13867878 | Msa0758570:intron | 25.0% |
! | TTCAAATTGAAAGAACCATT+AGG | + | chr5_2:13867981-13868000 | None:intergenic | 25.0% |
AACATGATCATTGTAGATGA+TGG | + | chr5_2:13862510-13862529 | None:intergenic | 30.0% | |
GTCAACTTAGGAATTTCTAA+TGG | - | chr5_2:13862584-13862603 | Msa0758570:three_prime_UTR | 30.0% | |
CGAATTAATGTAGTCATCAT+AGG | + | chr5_2:13862642-13862661 | None:intergenic | 30.0% | |
CTTTAGATGAAATGAAAGCA+GGG | + | chr5_2:13862679-13862698 | None:intergenic | 30.0% | |
CATTATATTTGGTCATGAAG+AGG | + | chr5_2:13862719-13862738 | None:intergenic | 30.0% | |
TCGTGCATGAATTAATTAAC+TGG | - | chr5_2:13862943-13862962 | Msa0758570:CDS | 30.0% | |
GGTCATTAAATCACACAATT+AGG | - | chr5_2:13863016-13863035 | Msa0758570:CDS | 30.0% | |
AAATAGTTAATAAGCTCCAC+AGG | - | chr5_2:13863042-13863061 | Msa0758570:CDS | 30.0% | |
GGATGATTGAACTTGATTAT+TGG | - | chr5_2:13863066-13863085 | Msa0758570:CDS | 30.0% | |
TGATAAGGTAAGTAAAGTCT+AGG | + | chr5_2:13863106-13863125 | None:intergenic | 30.0% | |
! | TAATTTGGAGTTCAGTGATA+AGG | + | chr5_2:13863121-13863140 | None:intergenic | 30.0% |
! | AAGGCTTTTATATATTGCCA+AGG | - | chr5_2:13864062-13864081 | Msa0758570:intron | 30.0% |
!!! | AAAGGCTTTTTTGAATTCGA+TGG | + | chr5_2:13864211-13864230 | None:intergenic | 30.0% |
TCGTTTACCAACTTTAAACA+TGG | - | chr5_2:13864298-13864317 | Msa0758570:intron | 30.0% | |
ATCTTCTAACTCCAAATACT+TGG | + | chr5_2:13864371-13864390 | None:intergenic | 30.0% | |
AGAATTATTTCAGATCCTGA+AGG | + | chr5_2:13864430-13864449 | None:intergenic | 30.0% | |
ATTCTATAAGCGCGTAATTA+TGG | - | chr5_2:13864445-13864464 | Msa0758570:intron | 30.0% | |
! | TAGATAAACAGTGTTGAACA+CGG | + | chr5_2:13864493-13864512 | None:intergenic | 30.0% |
TTTCTTAATGGCGTAAATTC+TGG | + | chr5_2:13864628-13864647 | None:intergenic | 30.0% | |
CCATATTGAAGACATTCTAA+TGG | + | chr5_2:13864729-13864748 | None:intergenic | 30.0% | |
CCATTAGAATGTCTTCAATA+TGG | - | chr5_2:13864726-13864745 | Msa0758570:intron | 30.0% | |
AAACAGAATGATGTCAGAAA+AGG | + | chr5_2:13864787-13864806 | None:intergenic | 30.0% | |
! | TTTTCTGACATCATTCTGTT+TGG | - | chr5_2:13864786-13864805 | Msa0758570:intron | 30.0% |
!! | GTATTTCAAGTTTCTCTTAG+GGG | + | chr5_2:13865343-13865362 | None:intergenic | 30.0% |
CGGAAAAAAAATAGTATTGC+AGG | - | chr5_2:13865458-13865477 | Msa0758570:intron | 30.0% | |
GTAATTCAAGCATCTTATAG+GGG | - | chr5_2:13865871-13865890 | Msa0758570:intron | 30.0% | |
GTGTAATTCAAACATCTTTG+AGG | - | chr5_2:13865959-13865978 | Msa0758570:intron | 30.0% | |
GATATAATATATGCAAGGTC+CGG | - | chr5_2:13866158-13866177 | Msa0758570:intron | 30.0% | |
ATATAATATATGCAAGGTCC+GGG | - | chr5_2:13866159-13866178 | Msa0758570:intron | 30.0% | |
GACTTTGATAGAAAACCTAA+TGG | + | chr5_2:13866425-13866444 | None:intergenic | 30.0% | |
ATTCTTCTCTTAGACATTTG+TGG | + | chr5_2:13866666-13866685 | None:intergenic | 30.0% | |
! | TTTGTCCCCTTTGAAAAATT+TGG | + | chr5_2:13866712-13866731 | None:intergenic | 30.0% |
ATTGAGGTCTTCATATGTAT+AGG | + | chr5_2:13866858-13866877 | None:intergenic | 30.0% | |
TTATAAACAGGTTGCAACTT+TGG | - | chr5_2:13866891-13866910 | Msa0758570:intron | 30.0% | |
TCTTGTATTAGGACAATAAG+GGG | + | chr5_2:13867126-13867145 | None:intergenic | 30.0% | |
GATCTTGTATTAGGACAATA+AGG | + | chr5_2:13867128-13867147 | None:intergenic | 30.0% | |
ATTGTCCTAATACAAGATCA+TGG | - | chr5_2:13867129-13867148 | Msa0758570:intron | 30.0% | |
! | TCGTATATTAAGGTATCTTG+AGG | + | chr5_2:13867174-13867193 | None:intergenic | 30.0% |
ATACGATGAACTTCTTGAAA+AGG | - | chr5_2:13867188-13867207 | Msa0758570:intron | 30.0% | |
TACGATGAACTTCTTGAAAA+GGG | - | chr5_2:13867189-13867208 | Msa0758570:intron | 30.0% | |
ATAGGATCACATTCATTTCT+AGG | + | chr5_2:13867240-13867259 | None:intergenic | 30.0% | |
! | TGATTATAAACTGCTCCTTT+TGG | + | chr5_2:13867297-13867316 | None:intergenic | 30.0% |
TGAAGCAATTCATGTTCATA+AGG | - | chr5_2:13867497-13867516 | Msa0758570:intron | 30.0% | |
GTTTGCAATAATTTCCAGAA+GGG | + | chr5_2:13867547-13867566 | None:intergenic | 30.0% | |
AGTTTGCAATAATTTCCAGA+AGG | + | chr5_2:13867548-13867567 | None:intergenic | 30.0% | |
TTGCAAACTGTGACATTATT+AGG | - | chr5_2:13867559-13867578 | Msa0758570:intron | 30.0% | |
TATGGTATGACTGAAACATT+AGG | - | chr5_2:13867681-13867700 | Msa0758570:intron | 30.0% | |
TTCCACTTTCTTACAATAAC+TGG | + | chr5_2:13867708-13867727 | None:intergenic | 30.0% | |
!! | TGTTTTGTTGAATCATCCAA+TGG | - | chr5_2:13868064-13868083 | Msa0758570:intron | 30.0% |
TTCAATTTCACAATTGCACA+AGG | + | chr5_2:13868152-13868171 | None:intergenic | 30.0% | |
GCAATTGTGAAATTGAAAGA+TGG | - | chr5_2:13868155-13868174 | Msa0758570:intron | 30.0% | |
AGATCAATTAGATGCTCATA+TGG | - | chr5_2:13868217-13868236 | Msa0758570:intron | 30.0% | |
TGGTGTGACTCAAATAATTA+AGG | - | chr5_2:13868332-13868351 | Msa0758570:intron | 30.0% | |
TATCATGCAAACCACTAATT+TGG | + | chr5_2:13868586-13868605 | None:intergenic | 30.0% | |
AAGGTTGAGACATCTTTCAT+AGG | + | chr5_2:13862552-13862571 | None:intergenic | 35.0% | |
! | GCTTTAGATGAAATGAAAGC+AGG | + | chr5_2:13862680-13862699 | None:intergenic | 35.0% |
AAGAGGGAACAAACAATAGT+TGG | + | chr5_2:13862702-13862721 | None:intergenic | 35.0% | |
! | GGATAGAACACTAGTTTGTA+TGG | + | chr5_2:13862983-13863002 | None:intergenic | 35.0% |
ACAAACTAGTGTTCTATCCA+TGG | - | chr5_2:13862984-13863003 | Msa0758570:CDS | 35.0% | |
AGAAAGGGGATCTCATAATT+TGG | + | chr5_2:13863136-13863155 | None:intergenic | 35.0% | |
! | TCTCATAATTTGGAGTTCAG+TGG | + | chr5_2:13863126-13863145 | None:intergenic | 35.0% |
AGAAAGGGGATCTCATAATT+TGG | + | chr5_2:13863136-13863155 | None:intergenic | 35.0% | |
ACTAATCAATTTGGCAACCA+AGG | - | chr5_2:13863257-13863276 | Msa0758570:CDS | 35.0% | |
CTAATCAATTTGGCAACCAA+GGG | - | chr5_2:13863258-13863277 | Msa0758570:CDS | 35.0% | |
TCATTAAGTGACTGCAAAAC+TGG | + | chr5_2:13863285-13863304 | None:intergenic | 35.0% | |
! | TAATCGGTGTCTTTGTCTTT+GGG | + | chr5_2:13863520-13863539 | None:intergenic | 35.0% |
! | TTAATCGGTGTCTTTGTCTT+TGG | + | chr5_2:13863521-13863540 | None:intergenic | 35.0% |
ATGCTTAACCAATGTCATTG+GGG | + | chr5_2:13863600-13863619 | None:intergenic | 35.0% | |
GATGCTTAACCAATGTCATT+GGG | + | chr5_2:13863601-13863620 | None:intergenic | 35.0% | |
AGAGTTGTGAGATCATTACT+TGG | - | chr5_2:13863644-13863663 | Msa0758570:CDS | 35.0% | |
AATCCTTAACCAATACTCTG+AGG | - | chr5_2:13863713-13863732 | Msa0758570:CDS | 35.0% | |
ATCCTTAACCAATACTCTGA+GGG | - | chr5_2:13863714-13863733 | Msa0758570:CDS | 35.0% | |
GAGAGAGATGAACTTTGTAA+AGG | + | chr5_2:13864229-13864248 | None:intergenic | 35.0% | |
! | GTTTGAGCCATGTTTAAAGT+TGG | + | chr5_2:13864308-13864327 | None:intergenic | 35.0% |
GGAGTTAGAAGATGATTCAT+TGG | - | chr5_2:13864378-13864397 | Msa0758570:intron | 35.0% | |
AAGCGCGTAATTATGGAAAA+TGG | - | chr5_2:13864452-13864471 | Msa0758570:intron | 35.0% | |
AGCGCGTAATTATGGAAAAT+GGG | - | chr5_2:13864453-13864472 | Msa0758570:intron | 35.0% | |
GAAATGTCAATGACCTAACT+CGG | + | chr5_2:13864597-13864616 | None:intergenic | 35.0% | |
TAATGGCGTAAATTCTGGTA+TGG | + | chr5_2:13864623-13864642 | None:intergenic | 35.0% | |
ATTACAACACACACCATTCT+TGG | - | chr5_2:13864825-13864844 | Msa0758570:intron | 35.0% | |
TTACAACACACACCATTCTT+GGG | - | chr5_2:13864826-13864845 | Msa0758570:intron | 35.0% | |
TGTCACTGTGACATTAAATC+TGG | - | chr5_2:13864869-13864888 | Msa0758570:intron | 35.0% | |
AATAGACCATGTACAAGAGT+GGG | + | chr5_2:13865000-13865019 | None:intergenic | 35.0% | |
TACACTATAGTAGATTGGTG+TGG | - | chr5_2:13865075-13865094 | Msa0758570:intron | 35.0% | |
!! | TATTTTGAATGAGAGGTGAG+AGG | + | chr5_2:13865296-13865315 | None:intergenic | 35.0% |
!! | AGATTTTAACATAAGAGGGG+AGG | + | chr5_2:13865371-13865390 | None:intergenic | 35.0% |
! | ATTCAAACATCTTTGAGGGA+AGG | - | chr5_2:13865964-13865983 | Msa0758570:intron | 35.0% |
! | TTCAAACATCTTTGAGGGAA+GGG | - | chr5_2:13865965-13865984 | Msa0758570:intron | 35.0% |
TATAATATATGCAAGGTCCG+GGG | - | chr5_2:13866160-13866179 | Msa0758570:intron | 35.0% | |
!!! | ATTTTTTTATTGGTGGTGGC+CGG | + | chr5_2:13866194-13866213 | None:intergenic | 35.0% |
CAACCATACTCATTGCATTT+CGG | - | chr5_2:13866307-13866326 | Msa0758570:intron | 35.0% | |
TAACCGAAATGCAATGAGTA+TGG | + | chr5_2:13866313-13866332 | None:intergenic | 35.0% | |
AAAACATGAAGCACACCATT+AGG | - | chr5_2:13866407-13866426 | Msa0758570:intron | 35.0% | |
ACAAAACAAATGATGTGGGA+GGG | + | chr5_2:13866632-13866651 | None:intergenic | 35.0% | |
TACAAAACAAATGATGTGGG+AGG | + | chr5_2:13866633-13866652 | None:intergenic | 35.0% | |
CCGTACAAAACAAATGATGT+GGG | + | chr5_2:13866636-13866655 | None:intergenic | 35.0% | |
!!! | CCCACATCATTTGTTTTGTA+CGG | - | chr5_2:13866633-13866652 | Msa0758570:intron | 35.0% |
ACCGTACAAAACAAATGATG+TGG | + | chr5_2:13866637-13866656 | None:intergenic | 35.0% | |
! | TGAGCAATTACATGTTGGTT+AGG | + | chr5_2:13866812-13866831 | None:intergenic | 35.0% |
AAATGAAGTTCATAGTGTGC+TGG | + | chr5_2:13866928-13866947 | None:intergenic | 35.0% | |
! | GCACACTATGAACTTCATTT+TGG | - | chr5_2:13866928-13866947 | Msa0758570:intron | 35.0% |
!! | ACTTCATTTTGGTGTACCAA+TGG | - | chr5_2:13866939-13866958 | Msa0758570:intron | 35.0% |
! | ATGTTGTTGCATCTAGTTTG+AGG | + | chr5_2:13866990-13867009 | None:intergenic | 35.0% |
GAGGTATATCTTTCACTAGT+TGG | + | chr5_2:13867155-13867174 | None:intergenic | 35.0% | |
GATGTGTAGTTCACTGATAT+AGG | + | chr5_2:13867258-13867277 | None:intergenic | 35.0% | |
ATATCAGTGAACTACACATC+AGG | - | chr5_2:13867258-13867277 | Msa0758570:intron | 35.0% | |
TAATAGTCGCGAGTGAATTA+AGG | + | chr5_2:13867332-13867351 | None:intergenic | 35.0% | |
!! | ATCCTATGCTGGTGTTTTTA+TGG | - | chr5_2:13867367-13867386 | Msa0758570:intron | 35.0% |
GTTGACATGTTTAGATGCAA+TGG | - | chr5_2:13867393-13867412 | Msa0758570:intron | 35.0% | |
ACATGTTTAGATGCAATGGA+TGG | - | chr5_2:13867397-13867416 | Msa0758570:intron | 35.0% | |
CATAAGGTAACACATTTGTG+TGG | - | chr5_2:13867513-13867532 | Msa0758570:intron | 35.0% | |
GTCCAGTTATTGTAAGAAAG+TGG | - | chr5_2:13867703-13867722 | Msa0758570:intron | 35.0% | |
!! | AGGGGTTATTGACTTTATGA+TGG | - | chr5_2:13867776-13867795 | Msa0758570:intron | 35.0% |
GGAACACTCTTCATTGTATT+TGG | + | chr5_2:13867822-13867841 | None:intergenic | 35.0% | |
!! | ATGAAGAGTGTTCCATATGA+TGG | - | chr5_2:13867828-13867847 | Msa0758570:intron | 35.0% |
! | CCTATGGTTTTTCCATCATA+TGG | + | chr5_2:13867843-13867862 | None:intergenic | 35.0% |
! | CCATATGATGGAAAAACCAT+AGG | - | chr5_2:13867840-13867859 | Msa0758570:intron | 35.0% |
AAAGGGAATACTTCAATGTC+AGG | - | chr5_2:13867876-13867895 | Msa0758570:intron | 35.0% | |
AAGGGAATACTTCAATGTCA+GGG | - | chr5_2:13867877-13867896 | Msa0758570:intron | 35.0% | |
! | AAGTGAGTCATGAAGCTTTT+AGG | - | chr5_2:13867916-13867935 | Msa0758570:intron | 35.0% |
! | AGTGAGTCATGAAGCTTTTA+GGG | - | chr5_2:13867917-13867936 | Msa0758570:intron | 35.0% |
TGAGTTTGTGAGTTCATTAG+AGG | - | chr5_2:13868034-13868053 | Msa0758570:intron | 35.0% | |
! | ACAGCTACTTTCAAAACCAT+TGG | + | chr5_2:13868083-13868102 | None:intergenic | 35.0% |
!!! | GTTTTGAAAGTAGCTGTTGT+GGG | - | chr5_2:13868086-13868105 | Msa0758570:intron | 35.0% |
!! | TTTTGAAAGTAGCTGTTGTG+GGG | - | chr5_2:13868087-13868106 | Msa0758570:intron | 35.0% |
GATTTGCCTCTTAATTCAAC+TGG | - | chr5_2:13868263-13868282 | Msa0758570:intron | 35.0% | |
ACCTTACCAGTTGAATTAAG+AGG | + | chr5_2:13868272-13868291 | None:intergenic | 35.0% | |
ACTCAAATAATTAAGGCGTG+TGG | - | chr5_2:13868339-13868358 | Msa0758570:intron | 35.0% | |
! | GGTGATGGTTGAATCAAAAT+CGG | - | chr5_2:13868423-13868442 | Msa0758570:CDS | 35.0% |
GTAGTCATCATAGGGAGATA+GGG | + | chr5_2:13862633-13862652 | None:intergenic | 40.0% | |
TGTAGTCATCATAGGGAGAT+AGG | + | chr5_2:13862634-13862653 | None:intergenic | 40.0% | |
ATGAAATGAAAGCAGGGCAA+AGG | + | chr5_2:13862673-13862692 | None:intergenic | 40.0% | |
TAGTTAATAAGCTCCACAGG+AGG | - | chr5_2:13863045-13863064 | Msa0758570:CDS | 40.0% | |
AGCTCCATTACTCACAGAAA+GGG | + | chr5_2:13863151-13863170 | None:intergenic | 40.0% | |
AAGCTCCATTACTCACAGAA+AGG | + | chr5_2:13863152-13863171 | None:intergenic | 40.0% | |
TCCTCCATTACTCACAGAAA+GGG | + | chr5_2:13863201-13863220 | None:intergenic | 40.0% | |
ATCCTCCATTACTCACAGAA+AGG | + | chr5_2:13863202-13863221 | None:intergenic | 40.0% | |
GGGTTGTATAACCAATACTC+TGG | + | chr5_2:13863361-13863380 | None:intergenic | 40.0% | |
! | AATCGGTGTCTTTGTCTTTG+GGG | + | chr5_2:13863519-13863538 | None:intergenic | 40.0% |
GGATGCTTAACCAATGTCAT+TGG | + | chr5_2:13863602-13863621 | None:intergenic | 40.0% | |
ACACACTGTAGTTAGAACCT+TGG | + | chr5_2:13864082-13864101 | None:intergenic | 40.0% | |
CCTAACTCGGTCTTAGAATA+AGG | + | chr5_2:13864584-13864603 | None:intergenic | 40.0% | |
!! | CCTTATTCTAAGACCGAGTT+AGG | - | chr5_2:13864581-13864600 | Msa0758570:intron | 40.0% |
TACAACACACACCATTCTTG+GGG | - | chr5_2:13864827-13864846 | Msa0758570:intron | 40.0% | |
ACACATTGTCACACAACATC+TGG | - | chr5_2:13864902-13864921 | Msa0758570:intron | 40.0% | |
CACATTGTCACACAACATCT+GGG | - | chr5_2:13864903-13864922 | Msa0758570:intron | 40.0% | |
ATTAAATCTGGGCCACACAA+AGG | + | chr5_2:13864944-13864963 | None:intergenic | 40.0% | |
GTCACCGTGACATTAAATCT+GGG | + | chr5_2:13864955-13864974 | None:intergenic | 40.0% | |
TGTCACCGTGACATTAAATC+TGG | + | chr5_2:13864956-13864975 | None:intergenic | 40.0% | |
CAAGAGTGGGGAAAATACTT+GGG | + | chr5_2:13864987-13865006 | None:intergenic | 40.0% | |
ACAAGAGTGGGGAAAATACT+TGG | + | chr5_2:13864988-13865007 | None:intergenic | 40.0% | |
! | ATTTTCCCCACTCTTGTACA+TGG | - | chr5_2:13864991-13865010 | Msa0758570:intron | 40.0% |
ATAGACCATGTACAAGAGTG+GGG | + | chr5_2:13864999-13865018 | None:intergenic | 40.0% | |
GAATAGACCATGTACAAGAG+TGG | + | chr5_2:13865001-13865020 | None:intergenic | 40.0% | |
! | TTCAAGTTTCTCTTAGGGGT+GGG | + | chr5_2:13865339-13865358 | None:intergenic | 40.0% |
!! | TTTCAAGTTTCTCTTAGGGG+TGG | + | chr5_2:13865340-13865359 | None:intergenic | 40.0% |
TTCAAGCATCTTATAGGGGA+AGG | - | chr5_2:13865875-13865894 | Msa0758570:intron | 40.0% | |
TCAAGCATCTTATAGGGGAA+GGG | - | chr5_2:13865876-13865895 | Msa0758570:intron | 40.0% | |
! | TCAAACATCTTTGAGGGAAG+GGG | - | chr5_2:13865966-13865985 | Msa0758570:intron | 40.0% |
! | TGAACTTAGCTCAGTTGGTA+TGG | - | chr5_2:13866126-13866145 | Msa0758570:intron | 40.0% |
!!! | TTTTTTTATTGGTGGTGGCC+GGG | + | chr5_2:13866193-13866212 | None:intergenic | 40.0% |
!!! | GTGTGCTTCATGTTTTGACT+AGG | + | chr5_2:13866403-13866422 | None:intergenic | 40.0% |
CAAAACAAATGATGTGGGAG+GGG | + | chr5_2:13866631-13866650 | None:intergenic | 40.0% | |
! | TCATAGTGTGCTGGAGTATT+TGG | + | chr5_2:13866919-13866938 | None:intergenic | 40.0% |
GAAATAATAGCACCTGCCAT+TGG | + | chr5_2:13866958-13866977 | None:intergenic | 40.0% | |
GGGTGGCTTGAAATTTCTTT+GGG | + | chr5_2:13867106-13867125 | None:intergenic | 40.0% | |
TGTATTAGGACAATAAGGGG+TGG | + | chr5_2:13867123-13867142 | None:intergenic | 40.0% | |
GTTGGCCATGATCTTGTATT+AGG | + | chr5_2:13867137-13867156 | None:intergenic | 40.0% | |
TTTCGATGTGAATCCTATGC+TGG | - | chr5_2:13867356-13867375 | Msa0758570:intron | 40.0% | |
GTCCATAAAAACACCAGCAT+AGG | + | chr5_2:13867372-13867391 | None:intergenic | 40.0% | |
GCAATGGATGGTGTTTCATT+TGG | - | chr5_2:13867409-13867428 | Msa0758570:intron | 40.0% | |
ATTTGGTTAATGCCTGCTCT+TGG | - | chr5_2:13867426-13867445 | Msa0758570:intron | 40.0% | |
GCAATAATTTCCAGAAGGGT+AGG | + | chr5_2:13867543-13867562 | None:intergenic | 40.0% | |
!! | AGTCATGAAGCTTTTAGGGA+TGG | - | chr5_2:13867921-13867940 | Msa0758570:intron | 40.0% |
!! | ATGAAGCTTTTAGGGATGGT+TGG | - | chr5_2:13867925-13867944 | Msa0758570:intron | 40.0% |
!! | CTTTTAGGGATGGTTGGTAT+AGG | - | chr5_2:13867931-13867950 | Msa0758570:intron | 40.0% |
CATTAGGTAACCTAACACCT+AGG | + | chr5_2:13867965-13867984 | None:intergenic | 40.0% | |
CTAGGTGTTAGGTTACCTAA+TGG | - | chr5_2:13867963-13867982 | Msa0758570:intron | 40.0% | |
GTTTGTGAGTTCATTAGAGG+TGG | - | chr5_2:13868037-13868056 | Msa0758570:intron | 40.0% | |
!!! | GGTTTTGAAAGTAGCTGTTG+TGG | - | chr5_2:13868085-13868104 | Msa0758570:intron | 40.0% |
TCATATGGTTCCTAAGAGTG+TGG | - | chr5_2:13868232-13868251 | Msa0758570:intron | 40.0% | |
GCCTCTTAATTCAACTGGTA+AGG | - | chr5_2:13868268-13868287 | Msa0758570:intron | 40.0% | |
! | AATTAAGGCGTGTGGTTTGT+AGG | - | chr5_2:13868347-13868366 | Msa0758570:intron | 40.0% |
TTCATGCAGTCCACATACAT+CGG | - | chr5_2:13868402-13868421 | Msa0758570:CDS | 40.0% | |
CAATCATGCAGTCTGCATAT+CGG | + | chr5_2:13868539-13868558 | None:intergenic | 40.0% | |
!! | AACCTTTAGAGCACTCAACC+AGG | + | chr5_2:13862421-13862440 | None:intergenic | 45.0% |
!! | AGGAAACTGATCGGTGTCAA+AGG | + | chr5_2:13862452-13862471 | None:intergenic | 45.0% |
!! | GCTCGTTCTAGGAAACTGAT+CGG | + | chr5_2:13862461-13862480 | None:intergenic | 45.0% |
AACCTTGTCACCATACACAG+TGG | + | chr5_2:13862486-13862505 | None:intergenic | 45.0% | |
TCTCAACCTTGCTTCTGCTT+TGG | - | chr5_2:13862562-13862581 | Msa0758570:three_prime_UTR | 45.0% | |
AGTTGACCAAAGCAGAAGCA+AGG | + | chr5_2:13862571-13862590 | None:intergenic | 45.0% | |
GCTTCTGCTTTGGTCAACTT+AGG | - | chr5_2:13862572-13862591 | Msa0758570:three_prime_UTR | 45.0% | |
CAAGTTCAATCATCCTCCTG+TGG | + | chr5_2:13863061-13863080 | None:intergenic | 45.0% | |
GATCCCCTTTCTGTGAGTAA+TGG | - | chr5_2:13863144-13863163 | Msa0758570:CDS | 45.0% | |
GCTCCATTACTCACAGAAAG+GGG | + | chr5_2:13863150-13863169 | None:intergenic | 45.0% | |
GATCCCCTTTCTGTGAGTAA+TGG | - | chr5_2:13863144-13863163 | Msa0758570:CDS | 45.0% | |
CCTCCATTACTCACAGAAAG+GGG | + | chr5_2:13863200-13863219 | None:intergenic | 45.0% | |
AACCAGTACCCCAATGACAT+TGG | - | chr5_2:13863589-13863608 | Msa0758570:CDS | 45.0% | |
AACCAATGTCATTGGGGTAC+TGG | + | chr5_2:13863594-13863613 | None:intergenic | 45.0% | |
!! | TGCCCTCAGAGTATTGGTTA+AGG | + | chr5_2:13863719-13863738 | None:intergenic | 45.0% |
GTGTGACAATGTGTGTTGTG+TGG | + | chr5_2:13864896-13864915 | None:intergenic | 45.0% | |
CACAACACAACACCTTTGTG+TGG | - | chr5_2:13864929-13864948 | Msa0758570:intron | 45.0% | |
GTGGCCCAGATTTAATGTCA+CGG | - | chr5_2:13864948-13864967 | Msa0758570:intron | 45.0% | |
TCAAGTTTCTCTTAGGGGTG+GGG | + | chr5_2:13865338-13865357 | None:intergenic | 45.0% | |
CATCGTGAACTTAGCTCAGT+TGG | - | chr5_2:13866121-13866140 | Msa0758570:intron | 45.0% | |
!!! | TTTTTTATTGGTGGTGGCCG+GGG | + | chr5_2:13866192-13866211 | None:intergenic | 45.0% |
!! | CATTTTGGTGTACCAATGGC+AGG | - | chr5_2:13866943-13866962 | Msa0758570:intron | 45.0% |
GGGGTGGCTTGAAATTTCTT+TGG | + | chr5_2:13867107-13867126 | None:intergenic | 45.0% | |
AACTACACATCAGGCTCAAC+TGG | - | chr5_2:13867267-13867286 | Msa0758570:intron | 45.0% | |
GGCTCAACTGGAATTCCAAA+AGG | - | chr5_2:13867279-13867298 | Msa0758570:intron | 45.0% | |
CTTAACAAAGTGGCAGAGCT+TGG | - | chr5_2:13867639-13867658 | Msa0758570:intron | 45.0% | |
! | GGATGGTTGGTATAGGACTA+GGG | - | chr5_2:13867938-13867957 | Msa0758570:intron | 45.0% |
! | GTGGGGAGATATGATGATGA+TGG | - | chr5_2:13868104-13868123 | Msa0758570:intron | 45.0% |
!! | TGATGATGGTGACGAGTGTT+TGG | - | chr5_2:13868118-13868137 | Msa0758570:intron | 45.0% |
! | GTTCCTAAGAGTGTGGTGTT+TGG | - | chr5_2:13868239-13868258 | Msa0758570:intron | 45.0% |
TCACCAAACACCACACTCTT+AGG | + | chr5_2:13868245-13868264 | None:intergenic | 45.0% | |
TCAACCATCACCGATGTATG+TGG | + | chr5_2:13868415-13868434 | None:intergenic | 45.0% | |
CTGCAGCAAAGCCAAATTAG+TGG | - | chr5_2:13868572-13868591 | Msa0758570:CDS | 45.0% | |
!! | GAAATTTAATATTTATAATT+AGG | + | chr5_2:13863550-13863569 | None:intergenic | 5.0% |
!! | ATATTAAATTTCATATTATA+AGG | - | chr5_2:13863558-13863577 | Msa0758570:CDS | 5.0% |
!! | GAAATTTAATATTTATAATT+AGG | + | chr5_2:13863550-13863569 | None:intergenic | 5.0% |
!!! | TCATATATATATATTTTTTT+TGG | - | chr5_2:13864516-13864535 | Msa0758570:intron | 5.0% |
!!! | ATGAATTTATTTTTTTTAAA+TGG | - | chr5_2:13865757-13865776 | Msa0758570:intron | 5.0% |
!! | TCACTGGTTCTGGCTCTGTA+CGG | + | chr5_2:13862377-13862396 | None:intergenic | 50.0% |
! | TGTCATGGTAACGTCCTCAC+TGG | + | chr5_2:13862393-13862412 | None:intergenic | 50.0% |
CGTTACCATGACACAAGACC+TGG | - | chr5_2:13862400-13862419 | Msa0758570:three_prime_UTR | 50.0% | |
! | CTCAACCAGGTCTTGTGTCA+TGG | + | chr5_2:13862408-13862427 | None:intergenic | 50.0% |
GACCTGGTTGAGTGCTCTAA+AGG | - | chr5_2:13862416-13862435 | Msa0758570:three_prime_UTR | 50.0% | |
AGCCACTGTGTATGGTGACA+AGG | - | chr5_2:13862481-13862500 | Msa0758570:three_prime_UTR | 50.0% | |
CCCCTTTCTGTGAGTAATGG+AGG | - | chr5_2:13863147-13863166 | Msa0758570:CDS | 50.0% | |
TGACTGCAAAACTGGTCCCT+TGG | + | chr5_2:13863277-13863296 | None:intergenic | 50.0% | |
!! | TGTCTTTGTCTTTGGGGCAC+TGG | + | chr5_2:13863513-13863532 | None:intergenic | 50.0% |
! | AACCAATACTCTGAGGGCAC+TGG | - | chr5_2:13863720-13863739 | Msa0758570:CDS | 50.0% |
AACCAGTGCCCTCAGAGTAT+TGG | + | chr5_2:13863725-13863744 | None:intergenic | 50.0% | |
!! | ACCATTCTTGGGGAAGCACT+TGG | - | chr5_2:13864837-13864856 | Msa0758570:intron | 50.0% |
!! | CCATTCTTGGGGAAGCACTT+GGG | - | chr5_2:13864838-13864857 | Msa0758570:intron | 50.0% |
TGGTTAATGCCTGCTCTTGG+TGG | - | chr5_2:13867429-13867448 | Msa0758570:intron | 50.0% | |
ATGTTTGTGCCACCAAGAGC+AGG | + | chr5_2:13867441-13867460 | None:intergenic | 50.0% | |
AAGGTGAGTGTCACAGTTGC+TGG | - | chr5_2:13867594-13867613 | Msa0758570:intron | 50.0% | |
! | GGGATGGTTGGTATAGGACT+AGG | - | chr5_2:13867937-13867956 | Msa0758570:intron | 50.0% |
TGGTATAGGACTAGGGACCT+AGG | - | chr5_2:13867945-13867964 | Msa0758570:intron | 50.0% | |
! | GGCGTGTGGTTTGTAGGATT+TGG | - | chr5_2:13868353-13868372 | Msa0758570:intron | 50.0% |
CAGTCCACATACATCGGTGA+TGG | - | chr5_2:13868408-13868427 | Msa0758570:CDS | 50.0% | |
GTACAGAGCCAGAACCAGTG+AGG | - | chr5_2:13862376-13862395 | Msa0758570:three_prime_UTR | 55.0% | |
!! | GGTAACGTCCTCACTGGTTC+TGG | + | chr5_2:13862387-13862406 | None:intergenic | 55.0% |
ACACAGTGGCTGCTCGTTCT+AGG | + | chr5_2:13862472-13862491 | None:intergenic | 55.0% | |
GAACGAGCAGCCACTGTGTA+TGG | - | chr5_2:13862473-13862492 | Msa0758570:three_prime_UTR | 55.0% | |
CCCAAGTGCTTCCCCAAGAA+TGG | + | chr5_2:13864841-13864860 | None:intergenic | 55.0% | |
GGACTAGGGACCTAGGTGTT+AGG | - | chr5_2:13867952-13867971 | Msa0758570:intron | 55.0% | |
!! | TGGTTCTGGCTCTGTACGGC+TGG | + | chr5_2:13862373-13862392 | None:intergenic | 60.0% |
AAGGTCCGGGGTTCAAACCC+CGG | - | chr5_2:13866172-13866191 | Msa0758570:intron | 60.0% | |
GTGTGGTGCACCTACCCTTC+TGG | - | chr5_2:13867530-13867549 | Msa0758570:intron | 60.0% | |
GGTGGCCGGGGTTTGAACCC+CGG | + | chr5_2:13866180-13866199 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_2 | gene | 13862347 | 13868630 | 13862347 | ID=Msa0758570;Name=Msa0758570 |
chr5_2 | mRNA | 13862347 | 13868630 | 13862347 | ID=Msa0758570-mRNA-1;Parent=Msa0758570;Name=Msa0758570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|1|1|2|278|572 |
chr5_2 | exon | 13862347 | 13864076 | 13862347 | ID=Msa0758570-mRNA-1:exon:6198;Parent=Msa0758570-mRNA-1 |
chr5_2 | exon | 13868364 | 13868630 | 13868364 | ID=Msa0758570-mRNA-1:exon:6197;Parent=Msa0758570-mRNA-1 |
chr5_2 | CDS | 13868364 | 13868630 | 13868364 | ID=Msa0758570-mRNA-1:cds;Parent=Msa0758570-mRNA-1 |
chr5_2 | CDS | 13862625 | 13864076 | 13862625 | ID=Msa0758570-mRNA-1:cds;Parent=Msa0758570-mRNA-1 |
chr5_2 | three_prime_UTR | 13862347 | 13862624 | 13862347 | ID=Msa0758570-mRNA-1:three_prime_utr;Parent=Msa0758570-mRNA-1 |
Gene Sequence |
Protein sequence |