AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0488790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488790 MtrunA17_Chr3g0078671 97.543 1058 17 4 1 1057 1 1050 0.0 2137
Msa0488790 MtrunA17_Chr8g0383701 61.719 1105 364 13 1 1056 1 1095 0.0 1409
Msa0488790 MtrunA17_Chr1g0201731 62.793 1110 343 14 1 1057 5 1097 0.0 1403
Msa0488790 MtrunA17_Chr4g0073711 60.221 1086 354 14 1 1056 1 1038 0.0 1318
Msa0488790 MtrunA17_Chr2g0296991 58.845 1074 388 11 3 1056 5 1044 0.0 1306
Msa0488790 MtrunA17_Chr3g0088821 58.867 1094 378 14 19 1056 1 1078 0.0 1303
Msa0488790 MtrunA17_Chr3g0137951 58.235 1099 404 12 1 1056 1 1087 0.0 1293
Msa0488790 MtrunA17_Chr8g0352231 58.986 1085 391 11 19 1056 1 1078 0.0 1276
Msa0488790 MtrunA17_Chr2g0284211 55.361 1026 395 12 39 1056 9 979 0.0 1160
Msa0488790 MtrunA17_Chr8g0379241 54.814 1049 377 13 39 1056 9 991 0.0 1142
Msa0488790 MtrunA17_Chr7g0267731 55.897 1009 387 12 65 1056 19 986 0.0 1120
Msa0488790 MtrunA17_Chr8g0364641 52.268 1058 426 12 1 1056 1 981 0.0 1108
Msa0488790 MtrunA17_Chr1g0183381 58.943 889 328 9 168 1056 53 904 0.0 1089
Msa0488790 MtrunA17_Chr5g0410641 41.274 1083 480 22 36 1039 102 1107 0.0 803
Msa0488790 MtrunA17_Chr4g0039801 41.398 1087 472 22 36 1039 124 1128 0.0 800
Msa0488790 MtrunA17_Chr1g0165411 39.678 1119 482 26 5 1045 90 1093 0.0 760
Msa0488790 MtrunA17_Chr7g0269741 46.197 894 372 18 225 1039 293 1156 0.0 754
Msa0488790 MtrunA17_Chr1g0165421 39.166 1103 521 25 5 1039 97 1117 0.0 749
Msa0488790 MtrunA17_Chr2g0297351 39.943 1059 478 22 82 1039 9 1010 0.0 741
Msa0488790 MtrunA17_Chr7g0274751 39.192 916 334 22 170 1039 60 798 0.0 572
Msa0488790 MtrunA17_Chr2g0322361 32.697 786 444 16 261 1037 37 746 1.96e-120 387
Msa0488790 MtrunA17_Chr2g0322351 34.190 778 417 23 261 1030 37 727 6.21e-120 385
Msa0488790 MtrunA17_Chr2g0322371 32.250 769 430 17 274 1035 47 731 2.74e-119 384
Msa0488790 MtrunA17_Chr4g0025201 32.723 764 416 18 261 1011 37 715 2.31e-116 376
Msa0488790 MtrunA17_Chr1g0186381 27.644 832 495 16 223 1043 4 739 3.73e-101 335
Msa0488790 MtrunA17_Chr3g0077511 28.316 784 440 19 245 1015 19 693 1.26e-90 305
Msa0488790 MtrunA17_Chr3g0102551 39.323 384 206 8 244 613 23 393 7.08e-82 282
Msa0488790 MtrunA17_Chr3g0102551 28.803 309 206 9 728 1027 426 729 8.43e-31 130
Msa0488790 MtrunA17_Chr3g0102531 39.589 389 219 7 244 628 21 397 1.85e-80 278
Msa0488790 MtrunA17_Chr3g0102531 31.475 305 197 6 730 1027 422 721 2.93e-32 135
Msa0488790 MtrunA17_Chr3g0102541 41.595 351 191 5 266 613 44 383 2.26e-80 278
Msa0488790 MtrunA17_Chr3g0102541 33.200 250 154 5 708 948 397 642 1.12e-31 133
Msa0488790 MtrunA17_Chr2g0322341 42.951 305 161 5 275 579 52 343 1.19e-75 253
Msa0488790 MtrunA17_Chr4g0046401 36.316 380 213 7 245 616 24 382 3.35e-70 249
Msa0488790 MtrunA17_Chr4g0046401 28.453 362 248 7 673 1030 376 730 2.61e-40 160
Msa0488790 MtrunA17_Chr3g0095791 35.279 377 210 7 244 620 18 360 2.61e-64 231
Msa0488790 MtrunA17_Chr3g0095791 24.642 349 241 7 676 1015 355 690 1.16e-31 132
Msa0488790 MtrunA17_Chr2g0307191 34.913 401 218 8 220 620 4 361 2.38e-62 226
Msa0488790 MtrunA17_Chr2g0307191 23.864 352 240 9 676 1015 356 691 2.97e-29 125
Msa0488790 MtrunA17_Chr2g0298581 33.773 379 212 8 245 620 19 361 1.09e-58 215
Msa0488790 MtrunA17_Chr2g0298581 28.659 328 205 8 695 1008 372 684 1.03e-31 133
Msa0488790 MtrunA17_Chr2g0322331 33.424 368 226 11 673 1030 13 371 2.38e-47 174
Msa0488790 MtrunA17_Chr3g0126641 39.831 236 96 7 549 764 1 210 5.88e-43 155
Msa0488790 MtrunA17_Chr0c03g0490021 57.480 127 51 2 883 1009 1 124 3.73e-39 142
Msa0488790 MtrunA17_Chr7g0252781 66.176 68 23 0 974 1041 6 73 4.07e-28 108
Msa0488790 MtrunA17_Chr2g0307241 39.375 160 88 3 245 404 19 169 4.04e-27 110
Msa0488790 MtrunA17_Chr3g0094861 48.649 111 56 1 6 115 3 113 1.46e-25 108
Msa0488790 MtrunA17_Chr8g0355061 70.175 57 17 0 883 939 1 57 2.41e-22 91.3
Msa0488790 MtrunA17_Chr7g0267741 50.794 63 31 0 31 93 1 63 1.88e-20 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0488790 AT5G09870.1 63.100 1084 356 9 1 1056 1 1068 0.0 1414
Msa0488790 AT5G64740.1 62.602 1099 352 13 1 1056 1 1083 0.0 1410
Msa0488790 AT2G21770.1 62.249 1094 367 11 1 1056 1 1086 0.0 1408
Msa0488790 AT4G39350.1 62.145 1091 371 10 1 1057 1 1083 0.0 1374
Msa0488790 AT5G17420.1 59.944 1076 361 14 1 1056 1 1026 0.0 1315
Msa0488790 AT5G05170.1 58.943 1079 387 11 20 1056 1 1065 0.0 1304
Msa0488790 AT4G32410.1 59.328 1072 398 9 1 1041 1 1065 0.0 1295
Msa0488790 AT2G25540.1 57.250 1069 408 12 7 1046 1 1049 0.0 1283
Msa0488790 AT5G44030.1 57.550 1053 396 9 34 1056 18 1049 0.0 1273
Msa0488790 AT5G44030.2 56.691 1076 398 10 34 1056 18 1078 0.0 1268
Msa0488790 AT4G18780.1 55.980 1020 394 8 31 1044 1 971 0.0 1157
Msa0488790 AT5G44030.3 64.000 775 246 5 310 1056 1 770 0.0 1050
Msa0488790 AT3G03050.1 40.801 1098 489 23 23 1039 114 1131 0.0 801
Msa0488790 AT5G16910.1 41.306 1087 475 23 36 1039 125 1131 0.0 788
Msa0488790 AT1G02730.1 40.930 1097 484 21 28 1039 151 1168 0.0 771
Msa0488790 AT4G38190.1 38.989 1108 503 23 5 1039 85 1092 0.0 764
Msa0488790 AT2G33100.2 44.740 903 376 20 222 1039 160 1024 0.0 745
Msa0488790 AT2G33100.1 44.740 903 376 20 222 1039 160 1024 0.0 745
Msa0488790 AT1G32180.1 42.544 912 425 17 202 1037 78 966 0.0 712
Msa0488790 AT1G32180.2 42.544 912 425 17 202 1037 78 966 0.0 712
Msa0488790 AT2G32610.1 30.307 815 457 21 250 1035 25 757 6.73e-105 346
Msa0488790 AT2G32620.1 31.078 798 446 20 261 1035 39 755 8.45e-103 340
Msa0488790 AT4G15320.3 30.711 788 441 20 245 1008 23 729 6.59e-102 338
Msa0488790 AT4G15320.5 30.711 788 441 20 245 1008 23 729 7.99e-102 338
Msa0488790 AT2G32530.1 29.766 813 458 22 249 1035 24 749 2.74e-99 331
Msa0488790 AT4G15320.4 30.250 800 444 20 245 1008 23 744 1.47e-98 329
Msa0488790 AT4G15290.1 29.936 785 445 18 273 1035 50 751 2.84e-98 328
Msa0488790 AT2G32540.1 29.899 796 445 21 267 1035 44 753 2.48e-97 325
Msa0488790 AT2G32620.3 32.810 637 347 15 261 893 39 598 2.39e-95 316
Msa0488790 AT2G32620.4 30.969 733 409 18 326 1035 1 659 1.86e-92 310
Msa0488790 AT4G15320.2 31.184 667 328 17 245 859 23 610 4.72e-89 303
Msa0488790 AT2G32620.2 34.137 539 278 12 273 807 50 515 3.04e-86 289
Msa0488790 AT1G55850.1 40.295 407 214 10 216 613 5 391 1.54e-83 287
Msa0488790 AT1G55850.1 29.595 321 210 10 715 1027 407 719 1.44e-33 139
Msa0488790 AT4G15320.1 29.603 706 331 17 245 859 23 653 1.04e-82 287
Msa0488790 AT4G24010.1 35.917 387 220 8 237 613 19 387 1.68e-68 245
Msa0488790 AT4G24010.1 32.653 294 191 4 722 1013 416 704 5.80e-41 162
Msa0488790 AT4G23990.1 35.476 389 219 9 237 613 38 406 1.95e-67 242
Msa0488790 AT4G23990.1 31.959 291 189 5 722 1009 435 719 6.27e-40 159
Msa0488790 AT4G24000.1 34.974 386 218 9 237 613 16 377 1.08e-64 233
Msa0488790 AT4G24000.1 31.849 292 188 6 722 1009 406 690 6.34e-40 159
Msa0488790 AT4G24000.2 31.849 292 188 6 722 1009 214 498 2.02e-40 157
Msa0488790 AT4G24000.2 39.791 191 101 5 429 613 3 185 7.36e-33 135
Msa0488790 AT4G23990.2 31.959 291 189 5 722 1009 221 505 2.15e-40 158
Msa0488790 AT4G23990.2 40.722 194 102 5 429 613 3 192 2.09e-34 140

Find 213 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTAAATGGAAACCAATTT+TGG 0.068442 3_4:-8933468 Msa0488790:exon
TCTTTCCAGTCATACCTTTA+AGG 0.108112 3_4:+8924782 None:intergenic
GAATCATGGGGACCATTATT+TGG 0.138300 3_4:-8924850 Msa0488790:CDS
CCTGCTGTTTGCTTGCTTAC+TGG 0.141380 3_4:-8925390 Msa0488790:CDS
GGTGGAGAAATGAGCAATTT+TGG 0.150657 3_4:-8925116 Msa0488790:CDS
CACTTGTTTCCATTCCTTAA+AGG 0.151138 3_4:-8924796 Msa0488790:CDS
AAAGTCTAAGTTTGAGTTAA+TGG 0.165412 3_4:-8926861 Msa0488790:CDS
TTTAGAAGACAAGCACTTTA+TGG 0.169015 3_4:-8926995 Msa0488790:CDS
TATTGCTTACCAATGCATTT+AGG 0.180880 3_4:+8927820 None:intergenic
TGCATTGTCCACCCTTCTTC+TGG 0.182855 3_4:+8928374 None:intergenic
AATCCACATTCTTCTAAAAT+TGG 0.188203 3_4:+8924655 None:intergenic
ATAATTGTTGAATTTATTAA+AGG 0.189389 3_4:+8930852 None:intergenic
ATCAATATCACTACCAAATT+TGG 0.198557 3_4:+8924616 None:intergenic
CAAAAGTTAGTCAAGAAATT+TGG 0.202413 3_4:-8926125 Msa0488790:CDS
ACTTTAAATGCAGTTCTTTC+AGG 0.213687 3_4:+8925612 None:intergenic
TGAGCAAACATTGTCCAATT+TGG 0.225185 3_4:-8925515 Msa0488790:CDS
ATAATAAGACTGATTGTTCT+TGG 0.226478 3_4:-8930263 Msa0488790:CDS
ACCCTTGAGACGCTTAAATT+TGG 0.229880 3_4:+8932628 None:intergenic
TTGTAACTAACTACCAAATT+TGG 0.254362 3_4:-8924629 Msa0488790:exon
CTGGATTCATAATTCTATAT+TGG 0.264353 3_4:+8930231 None:intergenic
AATTTATATGCTGTATTTGT+AGG 0.266151 3_4:-8925072 Msa0488790:CDS
AACATTAGTTTCCCAAATAA+TGG 0.266474 3_4:+8924838 None:intergenic
CCTTTATATCCATACCAAAT+TGG 0.268244 3_4:+8925501 None:intergenic
CTTCTGAATTTGCAAGGAAA+TGG 0.271384 3_4:-8928956 Msa0488790:CDS
ATGTTGAACTTCTTACAAAA+AGG 0.277019 3_4:+8928930 None:intergenic
AACAAATGTATTTGTTTGAT+TGG 0.277319 3_4:+8927184 None:intergenic
AACATAATTGCTATGGTTGC+TGG 0.278334 3_4:-8924901 Msa0488790:CDS
TGAGTAGATGCAATGAAAAT+TGG 0.292103 3_4:+8926095 None:intergenic
ATTGCTTACCAATGCATTTA+GGG 0.292983 3_4:+8927821 None:intergenic
GCCTGCAACTAACCCAAAAT+TGG 0.295265 3_4:+8933455 None:intergenic
CTCCTACCATTGTTCTTGTT+TGG 0.297615 3_4:-8924750 Msa0488790:CDS
TTCTCAGCAAAATACCATTC+TGG 0.309820 3_4:+8928894 None:intergenic
CCAATTTGGTATGGATATAA+AGG 0.313850 3_4:-8925501 Msa0488790:CDS
GTTACAGAAGATATCTTAAC+AGG 0.315029 3_4:-8925678 Msa0488790:CDS
GTTCAGGTTGGATGGATCTA+TGG 0.319601 3_4:-8925705 Msa0488790:intron
ATCATTCTTCTCTGTCTTGT+GGG 0.328835 3_4:-8924713 Msa0488790:CDS
CAATTCTCACAAAGATTTGA+TGG 0.340770 3_4:-8927230 Msa0488790:CDS
AATCATGGGGACCATTATTT+GGG 0.343210 3_4:-8924849 Msa0488790:CDS
GGTGCATAGCTAGCACTAAA+TGG 0.345250 3_4:-8933481 Msa0488790:exon
AGATTTGGTTCACTCTTTCA+TGG 0.346082 3_4:-8930166 Msa0488790:CDS
CAAGTCTTTCAATGGGCTCT+TGG 0.346860 3_4:-8925555 Msa0488790:CDS
GAACATAATGAGATAATGTT+TGG 0.350217 3_4:-8924973 Msa0488790:CDS
TGGATCCATTAGTAGGAAAA+AGG 0.352057 3_4:-8927265 Msa0488790:CDS
GTATGACTGGAAAGAATAAT+AGG 0.355748 3_4:-8924774 Msa0488790:CDS
GAAGGGTGTGCTAGAGTTGA+AGG 0.355942 3_4:-8931590 Msa0488790:intron
TCCAAGGACCTAGCTGCTTA+TGG 0.357901 3_4:-8930786 Msa0488790:CDS
GAGGAAAACTAGATATTGTT+TGG 0.358679 3_4:-8924578 Msa0488790:three_prime_UTR
TACGGATTGATTTGACTTGA+TGG 0.359844 3_4:+8930299 None:intergenic
AACTAGATATTGTTTGGTTG+TGG 0.360593 3_4:-8924572 Msa0488790:three_prime_UTR
TTTGGTAGTGATATTGATAT+AGG 0.369541 3_4:-8924611 Msa0488790:three_prime_UTR
TATTTGTTTGATTGGCATAT+TGG 0.374923 3_4:+8927192 None:intergenic
TTTCATTGCATCTACTCAAT+TGG 0.377814 3_4:-8926090 Msa0488790:CDS
ATTGTTTGGTTGTGGGTTGT+AGG 0.384688 3_4:-8924564 Msa0488790:three_prime_UTR
TTGATTTGACTTGATGGAAT+TGG 0.387990 3_4:+8930305 None:intergenic
TCATGTTATGTTTCTGATGA+TGG 0.395730 3_4:-8929014 Msa0488790:CDS
TCACTAACCTGTATCATTCC+TGG 0.396757 3_4:+8928311 None:intergenic
TCATCAAATAACCTTTCTAA+TGG 0.398141 3_4:-8925585 Msa0488790:CDS
GAGGATTAAAGTGGTTAGAA+AGG 0.401066 3_4:-8925479 Msa0488790:CDS
AGTTGCTATTTACACCTGTT+AGG 0.401952 3_4:+8925037 None:intergenic
ATCTTGACAGGCTTTCCTTA+AGG 0.402558 3_4:-8930097 Msa0488790:intron
TTGTTTGGTTGTGGGTTGTA+GGG 0.406522 3_4:-8924563 Msa0488790:three_prime_UTR
TGTCAGTAATATGTGAGATT+TGG 0.408332 3_4:-8930181 Msa0488790:CDS
TTCTGAATTTGCAAGGAAAT+GGG 0.410190 3_4:-8928955 Msa0488790:CDS
ATAGATAAACATGAAAGGTT+TGG 0.411252 3_4:-8927059 Msa0488790:intron
TAGACAATGCATATGCTTTG+TGG 0.414831 3_4:-8930208 Msa0488790:CDS
TAAGGAAAGCCTGTCAAGAT+AGG 0.418212 3_4:+8930100 None:intergenic
TGGTCACGAATATTATTTCC+AGG 0.420021 3_4:+8928335 None:intergenic
GGTCTATTCAAAGTCCTAAC+AGG 0.420368 3_4:-8925051 Msa0488790:CDS
CATCATTCTTCTCTGTCTTG+TGG 0.421895 3_4:-8924714 Msa0488790:CDS
CACTCTGAATCATCTGTTGT+TGG 0.423309 3_4:-8926818 Msa0488790:CDS
TCATAACAATTTCTACAAAC+AGG 0.425802 3_4:+8932695 None:intergenic
TTTAATATAAGCAATGTTGT+TGG 0.428653 3_4:+8924922 None:intergenic
AATAAATTATTTAAAAGATA+AGG 0.429081 3_4:-8928871 Msa0488790:CDS
GTAGTCACAAATATATCAAT+TGG 0.429504 3_4:+8929122 None:intergenic
GTCTACAACAAGTCTTTCAA+TGG 0.431721 3_4:-8925563 Msa0488790:CDS
TCTAGTTGCAAAGGCTAAGA+AGG 0.432238 3_4:-8928399 Msa0488790:CDS
AGCAGCAATGTTAACATTTG+AGG 0.433931 3_4:-8928991 Msa0488790:CDS
TGCAGATGGTGACCCCTTTG+TGG 0.440066 3_4:-8932738 Msa0488790:CDS
AAAGCATATGCATTGTCTAC+TGG 0.440702 3_4:+8930212 None:intergenic
GAAAGAGAGAAGAGCAATGA+AGG 0.444294 3_4:-8928832 Msa0488790:intron
AAAACAAGACATGTAATTGT+TGG 0.444723 3_4:-8926943 Msa0488790:CDS
GCATCTACTCAATTGGTTGA+TGG 0.452525 3_4:-8926083 Msa0488790:CDS
ACAGATTTGCAAGAGTTAGA+TGG 0.459419 3_4:-8932800 Msa0488790:CDS
TCCATGGACATCAATACCTT+TGG 0.460925 3_4:-8925430 Msa0488790:CDS
GGACCTACATATGTTGGAAC+AGG 0.462476 3_4:-8927025 Msa0488790:CDS
TGATATAGGAGTGTTATTAG+AGG 0.463155 3_4:-8924597 Msa0488790:three_prime_UTR
AATAGATTACCCTGCTGAAA+AGG 0.465410 3_4:-8929039 Msa0488790:CDS
GCTAAGAAGGTTCCAGAAGA+AGG 0.467713 3_4:-8928386 Msa0488790:CDS
GGAAGGATAGGATGGAGATA+TGG 0.469308 3_4:-8930746 Msa0488790:CDS
CCATTCCTTAAAGGTATGAC+TGG 0.469504 3_4:-8924787 Msa0488790:CDS
AAAATTGGACCAGTTGACTT+AGG 0.471224 3_4:+8924670 None:intergenic
TATATTAAACATAATTGCTA+TGG 0.474908 3_4:-8924908 Msa0488790:CDS
TTGTTGTGGATTGTGTTGCA+TGG 0.475364 3_4:-8926909 Msa0488790:CDS
AAAGGTTTGGATGGTATTCA+AGG 0.475376 3_4:-8927046 Msa0488790:CDS
CCAGTCATACCTTTAAGGAA+TGG 0.476107 3_4:+8924787 None:intergenic
GCCATAAGCAGCTAGGTCCT+TGG 0.476883 3_4:+8930785 None:intergenic
CTTGTTGTAGACCATTAGAA+AGG 0.478021 3_4:+8925574 None:intergenic
CATTCATTGCAAGCCACAAA+GGG 0.478479 3_4:+8932725 None:intergenic
ACTAGATATTGTTTGGTTGT+GGG 0.479336 3_4:-8924571 Msa0488790:three_prime_UTR
TGGCTAAAGTGTTGTTGTTG+TGG 0.479408 3_4:-8926923 Msa0488790:CDS
GAAAACAGAATGGGGAAAAG+AGG 0.486596 3_4:-8925985 Msa0488790:intron
TGGAAATGAATTGCCACGTT+TGG 0.487415 3_4:-8927898 Msa0488790:CDS
GACCTAGCTGCTTATGGCTA+TGG 0.487461 3_4:-8930780 Msa0488790:CDS
TAGTCTAAGTTCAACACAAA+AGG 0.493696 3_4:+8927341 None:intergenic
TAATTCAAATAGGTATGAAA+AGG 0.494036 3_4:-8929168 Msa0488790:intron
TCTGTTGTTGGGAGTACTAA+AGG 0.494468 3_4:-8926806 Msa0488790:intron
CTGAAACTTCTGAATTTGCA+AGG 0.495780 3_4:-8928962 Msa0488790:CDS
AGTTGAAGGAGATGAAGAGG+AGG 0.496474 3_4:-8931576 Msa0488790:CDS
AACTATGTGGAGAAGACATA+GGG 0.497177 3_4:-8932766 Msa0488790:CDS
AAGAATTACCTCAGGAGACA+TGG 0.497529 3_4:+8931484 None:intergenic
TGTTGTGGATTGTGTTGCAT+GGG 0.498572 3_4:-8926908 Msa0488790:CDS
TAGAAATATTAATGGTGCTA+AGG 0.499554 3_4:-8933508 None:intergenic
AGAAGCAATGTGTTTCATGA+TGG 0.500379 3_4:-8927285 Msa0488790:CDS
TGTTGCTTGGAAGGATAGGA+TGG 0.500594 3_4:-8930754 Msa0488790:CDS
AATTCTCACAAAGATTTGAT+GGG 0.501458 3_4:-8927229 Msa0488790:CDS
AAATACCATTCTGGAGCTCT+AGG 0.501787 3_4:+8928903 None:intergenic
AATAATATTCGTGACCATCC+AGG 0.502847 3_4:-8928329 Msa0488790:CDS
CCAGTAAGCAAGCAAACAGC+AGG 0.504459 3_4:+8925390 None:intergenic
GTTCAACACAAAAGGTGCAT+TGG 0.507621 3_4:+8927349 None:intergenic
ATGGACATCAATACCTTTGG+TGG 0.508644 3_4:-8925427 Msa0488790:CDS
TAGAGTTGAAGGAGATGAAG+AGG 0.509194 3_4:-8931579 Msa0488790:CDS
ACTCTGAATCATCTGTTGTT+GGG 0.510043 3_4:-8926817 Msa0488790:CDS
ATGGCTATGGAAGTGTTGCT+TGG 0.510622 3_4:-8930767 Msa0488790:CDS
CAAGTGAACAATCACCCAAA+AGG 0.514277 3_4:+8924813 None:intergenic
AAACATTGTCCAATTTGGTA+TGG 0.518352 3_4:-8925510 Msa0488790:CDS
AATTAATTCTCTAGTTGCAA+AGG 0.519606 3_4:-8928408 Msa0488790:CDS
CAAGATGGAATGTTGTGGCC+TGG 0.520064 3_4:-8928353 Msa0488790:CDS
AGCTGGAGCCCTAAATGCAT+TGG 0.520868 3_4:-8927829 Msa0488790:intron
ATTGTTATGAGTATGAAAGA+AGG 0.521241 3_4:-8932682 Msa0488790:CDS
TGATCAGAATGGATGAATCA+AGG 0.521689 3_4:-8930349 Msa0488790:intron
ATGCAGCTTAGTAATACAGC+TGG 0.521742 3_4:-8925222 Msa0488790:intron
TGACCATCCAGGAATGATAC+AGG 0.525972 3_4:-8928318 Msa0488790:intron
GTCTTATTATTATGATCATA+CGG 0.527516 3_4:+8930276 None:intergenic
GGTTTCAAAATGCATTGTCA+TGG 0.528438 3_4:-8925657 Msa0488790:CDS
CTATGAAGAGAAAACAGAAT+GGG 0.528905 3_4:-8925994 Msa0488790:CDS
TGATAATGATAATGAAGACT+TGG 0.529901 3_4:-8930673 Msa0488790:CDS
GCCACAGCTAATGACATGTA+TGG 0.530866 3_4:+8926016 None:intergenic
GACATAGGGGTTAATGCAGA+TGG 0.534361 3_4:-8932752 Msa0488790:CDS
ATTCAAGGACCTACATATGT+TGG 0.534611 3_4:-8927031 Msa0488790:CDS
TTCATTATCATACGTCAAGA+TGG 0.534909 3_4:-8933414 Msa0488790:CDS
TCAAAATGCATTGTCATGGA+TGG 0.535832 3_4:-8925653 Msa0488790:CDS
TGAGGGAAACCTATCTTGAC+AGG 0.536493 3_4:-8930109 Msa0488790:CDS
CTATGGAAGTGTTGCTTGGA+AGG 0.537862 3_4:-8930763 Msa0488790:CDS
AACCAAATTTAAGCGTCTCA+AGG 0.540508 3_4:-8932630 Msa0488790:CDS
TTTGCTCATGAATATGTCAA+TGG 0.545668 3_4:+8925530 None:intergenic
GTAGGAAATGAAGATGAAGA+TGG 0.547410 3_4:-8926167 Msa0488790:intron
ACCAAATTTAAGCGTCTCAA+GGG 0.549386 3_4:-8932629 Msa0488790:intron
AGATAATGTTTGGTTTGAAG+TGG 0.550068 3_4:-8924963 Msa0488790:CDS
TATTAATGGTGCTAAGGTAG+TGG 0.550349 3_4:-8933502 Msa0488790:five_prime_UTR
GATATAAAGGAGGATTAAAG+TGG 0.551140 3_4:-8925488 Msa0488790:CDS
AGATAGGTTTCCCTCATGAC+AGG 0.551671 3_4:+8930116 None:intergenic
CAAGTGTGCTAGAGATGAGA+TGG 0.551825 3_4:-8925161 Msa0488790:CDS
AAGCAAAGACAGAACCAACT+TGG 0.553998 3_4:-8930723 Msa0488790:CDS
TAAATGCTATTGTATATCCA+TGG 0.555496 3_4:-8925446 Msa0488790:CDS
GATTGTGTTGCATGGGAAAG+AGG 0.558016 3_4:-8926901 Msa0488790:CDS
TTCATGATGGATCCATTAGT+AGG 0.558058 3_4:-8927272 Msa0488790:CDS
CAAAGTGGTTTCCTGTCATG+AGG 0.558108 3_4:-8930127 Msa0488790:CDS
ACATTCATTGCAAGCCACAA+AGG 0.562578 3_4:+8932724 None:intergenic
GTGCTAGAGATGAGATGGAG+TGG 0.565930 3_4:-8925156 Msa0488790:CDS
CATCCTGTTCCAACATATGT+AGG 0.566254 3_4:+8927022 None:intergenic
ATTATTATGATCATACGGTA+CGG 0.566323 3_4:+8930281 None:intergenic
ACCAAAGGTATTGATGTCCA+TGG 0.567512 3_4:+8925429 None:intergenic
TGGAAAATTTATCATTCCTG+AGG 0.568091 3_4:-8925370 Msa0488790:intron
ATAAACATGAAAGGTTTGGA+TGG 0.568161 3_4:-8927055 Msa0488790:CDS
TTGTTATGAGTATGAAAGAA+GGG 0.569649 3_4:-8932681 Msa0488790:CDS
GAAGTGTTGCTTGGAAGGAT+AGG 0.570281 3_4:-8930758 Msa0488790:CDS
TTGTCACATGCAATTAACAA+TGG 0.571900 3_4:-8924877 Msa0488790:CDS
AGGTCCTTGGAAGGATCCAT+TGG 0.577571 3_4:+8930798 None:intergenic
CAACTATGTGGAGAAGACAT+AGG 0.578330 3_4:-8932767 Msa0488790:CDS
TCTACAACAAGTCTTTCAAT+GGG 0.581247 3_4:-8925562 Msa0488790:CDS
TTCTTATAGATAAACATGAA+AGG 0.582887 3_4:-8927064 Msa0488790:intron
CTAAGAAGGTTCCAGAAGAA+GGG 0.584015 3_4:-8928385 Msa0488790:CDS
GTGAGACACTAAAGCATGGT+GGG 0.586469 3_4:-8926061 Msa0488790:CDS
TCAAATAGGTATGAAAAGGA+AGG 0.587144 3_4:-8929164 Msa0488790:intron
TTTATTGCAAGCAAGACCAA+TGG 0.587191 3_4:-8930814 Msa0488790:CDS
TTCTTGATCAGTTCTCAAAG+TGG 0.590558 3_4:-8930142 Msa0488790:CDS
TGTATGTTTCTAGAGAAAAG+AGG 0.594706 3_4:-8927875 Msa0488790:CDS
GCTATGAAGAGAAAACAGAA+TGG 0.597797 3_4:-8925995 Msa0488790:CDS
GAAGGGTGGACAATGCAAGA+TGG 0.602622 3_4:-8928368 Msa0488790:CDS
TTATGAGTATGAAAGAAGGG+AGG 0.605988 3_4:-8932678 Msa0488790:CDS
AAGACCAATGGATCCTTCCA+AGG 0.606156 3_4:-8930802 Msa0488790:CDS
GAGTTACAATTGATGAATGG+TGG 0.608157 3_4:-8925134 Msa0488790:CDS
GTGGAGTTACAATTGATGAA+TGG 0.611972 3_4:-8925137 Msa0488790:CDS
GCCATACATGTCATTAGCTG+TGG 0.612149 3_4:-8926017 Msa0488790:CDS
TCAATTGGTGAAAGTTGTGA+TGG 0.612350 3_4:+8929137 None:intergenic
ACTGTGTTTGCTGTCACTAG+AGG 0.613883 3_4:+8929077 None:intergenic
TTGAACCTAGAGCTCCAGAA+TGG 0.616357 3_4:-8928908 Msa0488790:CDS
AGAATTACCTCAGGAGACAT+GGG 0.617721 3_4:+8931485 None:intergenic
TTAGTAATACAGCTGGAATG+TGG 0.620528 3_4:-8925215 Msa0488790:CDS
AATCAAGGCAACCATTGTCA+AGG 0.621239 3_4:-8930334 Msa0488790:CDS
GGTCAAACATGTCAACTATG+TGG 0.622399 3_4:-8932779 Msa0488790:CDS
ATTTGGTATGGATATAAAGG+AGG 0.624865 3_4:-8925498 Msa0488790:CDS
TATGAGTATGAAAGAAGGGA+GGG 0.625897 3_4:-8932677 Msa0488790:CDS
TGAAGACTTGGATAAGAGTG+TGG 0.626636 3_4:-8930661 Msa0488790:CDS
TAAGCAGCTAGGTCCTTGGA+AGG 0.630204 3_4:+8930789 None:intergenic
AGAGTACAATATGCCACCAA+AGG 0.639909 3_4:+8925414 None:intergenic
TAACCTGTATCATTCCTGGA+TGG 0.640620 3_4:+8928315 None:intergenic
ATTGGCAACTTCCTTGACAA+TGG 0.640627 3_4:+8930323 None:intergenic
AGAAGGTTCCAGAAGAAGGG+TGG 0.640701 3_4:-8928382 Msa0488790:CDS
AAAGTGGTTTCCTGTCATGA+GGG 0.645331 3_4:-8930126 Msa0488790:CDS
CTAGAAACATACACCAAACG+TGG 0.646967 3_4:+8927885 None:intergenic
TTCCATAGCCATAAGCAGCT+AGG 0.649165 3_4:+8930778 None:intergenic
AACAAAAGATGATGAAGACA+AGG 0.650022 3_4:-8924995 Msa0488790:CDS
GACCAAACAAGAACAATGGT+AGG 0.651032 3_4:+8924748 None:intergenic
TATGAAGAGAAAACAGAATG+GGG 0.653535 3_4:-8925993 Msa0488790:CDS
TCATTACATCAACAATAGCA+AGG 0.656151 3_4:-8927315 Msa0488790:CDS
GCAAATTCCCATGTCTCCTG+AGG 0.656290 3_4:-8931492 Msa0488790:intron
GATTGACCAAACAAGAACAA+TGG 0.662074 3_4:+8924744 None:intergenic
CAATGCAAGATGGAATGTTG+TGG 0.693503 3_4:-8928358 Msa0488790:CDS
ATTCATTGCAAGCCACAAAG+GGG 0.721890 3_4:+8932726 None:intergenic
GATGGTGAGACACTAAAGCA+TGG 0.742092 3_4:-8926065 Msa0488790:CDS
ACTATGTGGAGAAGACATAG+GGG 0.754009 3_4:-8932765 Msa0488790:CDS
GGTGAGACACTAAAGCATGG+TGG 0.756625 3_4:-8926062 Msa0488790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTTTTATTTTTTTA+GGG + chr3_4:8931285-8931304 None:intergenic 0.0%
!!! TTATTTTTTTTTATTTTTTT+AGG + chr3_4:8931286-8931305 None:intergenic 0.0%
!! ATTTACATAAATAATATGTA+TGG + chr3_4:8924875-8924894 None:intergenic 10.0%
!! ACATATTATTTATGTAAATT+TGG - chr3_4:8924876-8924895 Msa0488790:CDS 10.0%
!!! TATGTTTTTTATTTTCTTTT+TGG - chr3_4:8925570-8925589 Msa0488790:CDS 10.0%
!!! TTTTAAAATACTCATTAATA+TGG - chr3_4:8926326-8926345 Msa0488790:intron 10.0%
!! ATAATTGTTGAATTTATTAA+AGG + chr3_4:8927181-8927200 None:intergenic 10.0%
!! TAAAATGAATATTATACATA+TGG - chr3_4:8927607-8927626 Msa0488790:intron 10.0%
!!! ATACTTTGTTATTTAGTTAA+AGG - chr3_4:8924769-8924788 Msa0488790:CDS 15.0%
!!! TATTTTCAATTTTACGATTT+TGG + chr3_4:8925082-8925101 None:intergenic 15.0%
!! AATCGTAAAATTGAAAATAA+AGG - chr3_4:8925083-8925102 Msa0488790:CDS 15.0%
!! ATCGTAAAATTGAAAATAAA+GGG - chr3_4:8925084-8925103 Msa0488790:CDS 15.0%
!! TCTTTGTAATAAATACTTAA+AGG - chr3_4:8925675-8925694 Msa0488790:CDS 15.0%
!! AAAAAAAAAAAAAGAGATAG+AGG + chr3_4:8925822-8925841 None:intergenic 15.0%
!!! TCTATCTCTTTTTTTTTTTT+TGG - chr3_4:8925821-8925840 Msa0488790:intron 15.0%
!!! TTTTTTACAACTTAATAGAT+CGG - chr3_4:8925994-8926013 Msa0488790:CDS 15.0%
!! AACCAAAAATAAATATGAAA+TGG - chr3_4:8926371-8926390 Msa0488790:intron 15.0%
!! TGAAGAAATTCAATAAATAA+GGG + chr3_4:8926870-8926889 None:intergenic 15.0%
!! TTGAAGAAATTCAATAAATA+AGG + chr3_4:8926871-8926890 None:intergenic 15.0%
!!! AGTTGTTTTATTTTGTTTTT+TGG - chr3_4:8927986-8928005 Msa0488790:intron 15.0%
!! AAAATTATACCATATTATGA+AGG + chr3_4:8928705-8928724 None:intergenic 15.0%
!!! TTTAAAATGAATGTTGTTTA+AGG + chr3_4:8929262-8929281 None:intergenic 15.0%
!! TCAATCTTAATATTAGTATA+TGG - chr3_4:8929548-8929567 Msa0488790:intron 15.0%
!! AAGACCAAAATAATAAATTT+AGG + chr3_4:8929810-8929829 None:intergenic 15.0%
!!! ATATTTATTTTGATAAGAGA+AGG + chr3_4:8929925-8929944 None:intergenic 15.0%
!!! TTTTGGTTTTTAATTTTGAA+TGG - chr3_4:8930919-8930938 Msa0488790:intron 15.0%
!!! TAATTCAATAACTTCTTTTT+TGG + chr3_4:8931478-8931497 None:intergenic 15.0%
!!! CATTTTTCTATAATGAAATT+AGG + chr3_4:8931712-8931731 None:intergenic 15.0%
!! TTTCATTATAGAAAAATGTT+AGG - chr3_4:8931714-8931733 Msa0488790:intron 15.0%
!! TATATTAAACATAATTGCTA+TGG - chr3_4:8933122-8933141 Msa0488790:intron 15.0%
!!! TATGTTACTTTTCAAGAATT+TGG - chr3_4:8924846-8924865 Msa0488790:CDS 20.0%
!!! TATTCTACTTTTCACTAATT+TGG + chr3_4:8925053-8925072 None:intergenic 20.0%
!!! CTAAGGTTTAAATACATTTT+TGG + chr3_4:8925113-8925132 None:intergenic 20.0%
!! TTTATTACAAAGAGCAAAAT+AGG + chr3_4:8925668-8925687 None:intergenic 20.0%
!! TACAAAAGATACAAGTAAAA+GGG - chr3_4:8925772-8925791 Msa0488790:intron 20.0%
!! GCAGATAAAAAAAAATCTAT+TGG + chr3_4:8925800-8925819 None:intergenic 20.0%
!!! CTCCATTTCATATTTATTTT+TGG + chr3_4:8926376-8926395 None:intergenic 20.0%
!! CAAAAATAAATATGAAATGG+AGG - chr3_4:8926374-8926393 Msa0488790:intron 20.0%
!! TAGAAATTTAAACATCTTGA+AGG + chr3_4:8926738-8926757 None:intergenic 20.0%
!! AAAAATAATAAATGCTGCAT+TGG + chr3_4:8926833-8926852 None:intergenic 20.0%
!!! AATAAATAAGGGTATAATAG+TGG + chr3_4:8926859-8926878 None:intergenic 20.0%
!!! GTCTTATTATTATGATCATA+CGG + chr3_4:8927757-8927776 None:intergenic 20.0%
!! GAAACTAAAATGTTTATAAG+TGG - chr3_4:8928033-8928052 Msa0488790:intron 20.0%
!! TTTATAAATAGTAGCGATAA+AGG - chr3_4:8928097-8928116 Msa0488790:intron 20.0%
!! TATACTATTTCGTAAATTTG+AGG + chr3_4:8928137-8928156 None:intergenic 20.0%
!!! ATCTAACATCACAATTTTAA+AGG + chr3_4:8928295-8928314 None:intergenic 20.0%
!! TAAAATTGTGATGTTAGATT+TGG - chr3_4:8928296-8928315 Msa0488790:intron 20.0%
!!! TTTTTTCGTTCAAATTGTAA+AGG + chr3_4:8928403-8928422 None:intergenic 20.0%
!! ATGAGAATAATTCATTCATT+TGG - chr3_4:8928677-8928696 Msa0488790:intron 20.0%
!!! TTTCAACCTTATGATTTTTA+CGG + chr3_4:8928781-8928800 None:intergenic 20.0%
!!! CAACTTTTTCTAATTCAAAT+AGG - chr3_4:8928852-8928871 Msa0488790:CDS 20.0%
!! TAATTCAAATAGGTATGAAA+AGG - chr3_4:8928862-8928881 Msa0488790:CDS 20.0%
!!! TGTGGTTAATTATAATTTTC+AGG + chr3_4:8929371-8929390 None:intergenic 20.0%
!!! AAAAGTGATACTTTGAAAAT+TGG + chr3_4:8929833-8929852 None:intergenic 20.0%
!! TGACAAGTTAAAATATTATG+TGG - chr3_4:8929889-8929908 Msa0488790:intron 20.0%
!!! TTCATTTTCTTCAATCTATT+AGG + chr3_4:8930251-8930270 None:intergenic 20.0%
!!! TGTTTTTAATTTATTTGTCG+AGG - chr3_4:8930571-8930590 Msa0488790:intron 20.0%
!! AACAAATGTATTTGTTTGAT+TGG + chr3_4:8930849-8930868 None:intergenic 20.0%
!! TTCTTATAGATAAACATGAA+AGG - chr3_4:8930966-8930985 Msa0488790:intron 20.0%
!!! ATTTAATCGGTTGAAATTTT+CGG + chr3_4:8931330-8931349 None:intergenic 20.0%
!! AAAATTTCAACCGATTAAAT+CGG - chr3_4:8931330-8931349 Msa0488790:intron 20.0%
!! AATACATCTATGTATTTACT+AGG + chr3_4:8931760-8931779 None:intergenic 20.0%
!! ACTTATAAAATCTCAAATGT+AGG - chr3_4:8931845-8931864 Msa0488790:intron 20.0%
!! AATTTATATGCTGTATTTGT+AGG - chr3_4:8932958-8932977 Msa0488790:intron 20.0%
!! TTTAATATAAGCAATGTTGT+TGG + chr3_4:8933111-8933130 None:intergenic 20.0%
!! ACTAAATGGAAACCAATTTT+GGG - chr3_4:8924563-8924582 Msa0488790:three_prime_UTR 25.0%
! TTCTTGAAAAGTAACATAGA+AGG + chr3_4:8924844-8924863 None:intergenic 25.0%
!! CACTTTCAAACCATTAATTT+TGG - chr3_4:8924919-8924938 Msa0488790:CDS 25.0%
!! TTTCAAACCATTAATTTTGG+AGG - chr3_4:8924922-8924941 Msa0488790:CDS 25.0%
!! TTCAAACCATTAATTTTGGA+GGG - chr3_4:8924923-8924942 Msa0488790:CDS 25.0%
! AAAAAACCCTCCAAAATTAA+TGG + chr3_4:8924932-8924951 None:intergenic 25.0%
!!! TCTGGATTTTTTTACACTTT+TGG + chr3_4:8924970-8924989 None:intergenic 25.0%
! AAAAAAATCCAGAGACTAAT+AGG - chr3_4:8924977-8924996 Msa0488790:CDS 25.0%
! AAAAAATCCAGAGACTAATA+GGG - chr3_4:8924978-8924997 Msa0488790:CDS 25.0%
! CGCATGTATATATTAAACTA+AGG + chr3_4:8925130-8925149 None:intergenic 25.0%
! AATAGTTATGCATGATGATT+TGG - chr3_4:8925186-8925205 Msa0488790:CDS 25.0%
! TCATAACAATTTCTACAAAC+AGG + chr3_4:8925338-8925357 None:intergenic 25.0%
! ATTGTTATGAGTATGAAAGA+AGG - chr3_4:8925348-8925367 Msa0488790:intron 25.0%
! TTGTTATGAGTATGAAAGAA+GGG - chr3_4:8925349-8925368 Msa0488790:intron 25.0%
!!! TTAAATTTGGTTTTGCATTG+AGG + chr3_4:8925392-8925411 None:intergenic 25.0%
!! TGTATCTTTTGTACAAAAAG+TGG + chr3_4:8925765-8925784 None:intergenic 25.0%
! GTACAAAAGATACAAGTAAA+AGG - chr3_4:8925771-8925790 Msa0488790:intron 25.0%
! ACATGCATTGTTATATGTAA+GGG + chr3_4:8925919-8925938 None:intergenic 25.0%
! ATCTCATAAAAGAGTGATAT+TGG + chr3_4:8926091-8926110 None:intergenic 25.0%
! AACCATCTTCATTATATCTA+AGG - chr3_4:8926263-8926282 Msa0488790:intron 25.0%
! AGACAAATGTTGAATATGTT+TGG - chr3_4:8926295-8926314 Msa0488790:intron 25.0%
!!! CAAAGTTTATTAGTTTGTTG+TGG - chr3_4:8926569-8926588 Msa0488790:intron 25.0%
!! TGATAATGATAATGAAGACT+TGG - chr3_4:8927357-8927376 Msa0488790:CDS 25.0%
! AAAAAGAGTGATACTTACAA+AGG + chr3_4:8927412-8927431 None:intergenic 25.0%
! ATTATTATGATCATACGGTA+CGG + chr3_4:8927752-8927771 None:intergenic 25.0%
! ATAATAAGACTGATTGTTCT+TGG - chr3_4:8927767-8927786 Msa0488790:intron 25.0%
! CTGGATTCATAATTCTATAT+TGG + chr3_4:8927802-8927821 None:intergenic 25.0%
! CAAGTAATCTACAAATAGTT+TGG - chr3_4:8927956-8927975 Msa0488790:intron 25.0%
! ACTAAAATGTTTATAAGTGG+TGG - chr3_4:8928036-8928055 Msa0488790:intron 25.0%
!! GATTTGAAAGACGTTTATTT+TGG + chr3_4:8928204-8928223 None:intergenic 25.0%
! TCAATAAGTAAGTGTTTCAT+TGG + chr3_4:8928226-8928245 None:intergenic 25.0%
! AATTGTAGACGTTCAATTTA+AGG - chr3_4:8928331-8928350 Msa0488790:CDS 25.0%
! ATTGTAGACGTTCAATTTAA+GGG - chr3_4:8928332-8928351 Msa0488790:CDS 25.0%
!! TTCAACCTTATGATTTTTAC+GGG + chr3_4:8928780-8928799 None:intergenic 25.0%
! GTAGTCACAAATATATCAAT+TGG + chr3_4:8928911-8928930 None:intergenic 25.0%
! ATGTTGAACTTCTTACAAAA+AGG + chr3_4:8929103-8929122 None:intergenic 25.0%
!!! CAACATTCATTTTAAAACAC+AGG - chr3_4:8929266-8929285 Msa0488790:intron 25.0%
! CATGTACAATTGACATAATT+TGG - chr3_4:8929318-8929337 Msa0488790:intron 25.0%
! AATTTCGACATCAATTTAGA+TGG + chr3_4:8929495-8929514 None:intergenic 25.0%
! AAATAATAAATTTAGGCACG+AGG + chr3_4:8929803-8929822 None:intergenic 25.0%
!! CGTGCCTAAATTTATTATTT+TGG - chr3_4:8929803-8929822 Msa0488790:intron 25.0%
!! TTTTTCTCATTCATGTGATT+AGG - chr3_4:8929849-8929868 Msa0488790:intron 25.0%
!! TTTTCTCATTCATGTGATTA+GGG - chr3_4:8929850-8929869 Msa0488790:intron 25.0%
! TGTATTATAGACTATAGAGA+TGG + chr3_4:8930026-8930045 None:intergenic 25.0%
! TCTATAGTCTATAATACATG+TGG - chr3_4:8930028-8930047 Msa0488790:intron 25.0%
!! TATGTTTATCAGGTTTTCTT+AGG - chr3_4:8930085-8930104 Msa0488790:intron 25.0%
!!! TTTTTTTGGTGATTGAAGTT+AGG + chr3_4:8930181-8930200 None:intergenic 25.0%
! CTATTAGGATTCTATTTCAA+AGG + chr3_4:8930236-8930255 None:intergenic 25.0%
! TATTTGTCGAGGTTTAAATT+TGG - chr3_4:8930582-8930601 Msa0488790:intron 25.0%
! AATTCTCACAAAGATTTGAT+GGG - chr3_4:8930801-8930820 Msa0488790:CDS 25.0%
! TATTTGTTTGATTGGCATAT+TGG + chr3_4:8930841-8930860 None:intergenic 25.0%
! ATAGATAAACATGAAAGGTT+TGG - chr3_4:8930971-8930990 Msa0488790:intron 25.0%
! AAAACAAGACATGTAATTGT+TGG - chr3_4:8931087-8931106 Msa0488790:intron 25.0%
!! AAAGTCTAAGTTTGAGTTAA+TGG - chr3_4:8931169-8931188 Msa0488790:intron 25.0%
!!! AACTAACTTACCGATTTAAT+CGG + chr3_4:8931343-8931362 None:intergenic 25.0%
!!! TTCAATAACTTCTTTTTTGG+CGG + chr3_4:8931475-8931494 None:intergenic 25.0%
! ATAACACGAAAAAGAATTCA+CGG + chr3_4:8931541-8931560 None:intergenic 25.0%
! ACAATTTAGTGAACTATAGT+TGG - chr3_4:8931577-8931596 Msa0488790:CDS 25.0%
!! CTAGGTTTAATTGATTCAAT+CGG + chr3_4:8931664-8931683 None:intergenic 25.0%
! AATCAATTAAACCTAGCTTA+CGG - chr3_4:8931668-8931687 Msa0488790:intron 25.0%
! CAAAAGTTAGTCAAGAAATT+TGG - chr3_4:8931905-8931924 Msa0488790:intron 25.0%
! GACTTAGAATAGAAAAGTAA+TGG + chr3_4:8932085-8932104 None:intergenic 25.0%
!!! TTTTCTATTCTAAGTCTTGT+TGG - chr3_4:8932089-8932108 Msa0488790:intron 25.0%
!! AAAATTCTTTTTCTTCGTTC+AGG - chr3_4:8932309-8932328 Msa0488790:intron 25.0%
! TCATCAAATAACCTTTCTAA+TGG - chr3_4:8932445-8932464 Msa0488790:intron 25.0%
! TAAATGCTATTGTATATCCA+TGG - chr3_4:8932584-8932603 Msa0488790:intron 25.0%
! GAACATAATGAGATAATGTT+TGG - chr3_4:8933057-8933076 Msa0488790:intron 25.0%
!!! TTAACAATGGTTTTGAATCA+TGG - chr3_4:8933166-8933185 Msa0488790:intron 25.0%
!!! TAACAATGGTTTTGAATCAT+GGG - chr3_4:8933167-8933186 Msa0488790:intron 25.0%
!! AACATTAGTTTCCCAAATAA+TGG + chr3_4:8933195-8933214 None:intergenic 25.0%
!! GAAACTAATGTTTTCCTTTT+GGG - chr3_4:8933203-8933222 Msa0488790:intron 25.0%
!!! AATCCACATTCTTCTAAAAT+TGG + chr3_4:8933378-8933397 None:intergenic 25.0%
!!! AATTTTAGAAGAATGTGGAT+TGG - chr3_4:8933377-8933396 Msa0488790:intron 25.0%
! TTGTAACTAACTACCAAATT+TGG - chr3_4:8933401-8933420 Msa0488790:intron 25.0%
! ATCAATATCACTACCAAATT+TGG + chr3_4:8933417-8933436 None:intergenic 25.0%
!!! TTTGGTAGTGATATTGATAT+AGG - chr3_4:8933419-8933438 Msa0488790:CDS 25.0%
! CACTAAATGGAAACCAATTT+TGG - chr3_4:8924562-8924581 Msa0488790:three_prime_UTR 30.0%
TTCATTATCATACGTCAAGA+TGG - chr3_4:8924616-8924635 Msa0488790:three_prime_UTR 30.0%
!!! AGGGTTTTTTTTGACTCAAA+AGG - chr3_4:8924942-8924961 Msa0488790:CDS 30.0%
!!! GGGTTTTTTTTGACTCAAAA+GGG - chr3_4:8924943-8924962 Msa0488790:CDS 30.0%
! TTAATTACCCTATTAGTCTC+TGG + chr3_4:8924988-8925007 None:intergenic 30.0%
CAGTGTAACTATATATGTGT+GGG + chr3_4:8925165-8925184 None:intergenic 30.0%
TCAGTGTAACTATATATGTG+TGG + chr3_4:8925166-8925185 None:intergenic 30.0%
AAAGGTGAATTCTAGTCAAT+AGG + chr3_4:8925855-8925874 None:intergenic 30.0%
! ACTAGAATTCACCTTTTACA+AGG - chr3_4:8925859-8925878 Msa0488790:intron 30.0%
! CTTTTACAAGGTGAATAAGT+GGG - chr3_4:8925871-8925890 Msa0488790:intron 30.0%
! TTTTACAAGGTGAATAAGTG+GGG - chr3_4:8925872-8925891 Msa0488790:intron 30.0%
GACATGCATTGTTATATGTA+AGG + chr3_4:8925920-8925939 None:intergenic 30.0%
TACTCTTTACAAGAGATTCA+AGG + chr3_4:8926031-8926050 None:intergenic 30.0%
GTCCTTAGATATAATGAAGA+TGG + chr3_4:8926268-8926287 None:intergenic 30.0%
TGTTGAATATGTTTGGACTT+TGG - chr3_4:8926302-8926321 Msa0488790:intron 30.0%
! GAGAATGAATTCGATTTTGA+TGG - chr3_4:8926494-8926513 Msa0488790:intron 30.0%
! AAACTTTGAAGAATTACCTC+AGG + chr3_4:8926557-8926576 None:intergenic 30.0%
TTAGACTGATCACCTTTATT+GGG - chr3_4:8926660-8926679 Msa0488790:intron 30.0%
AAGAGACAATAATTGTGAGA+CGG + chr3_4:8926767-8926786 None:intergenic 30.0%
TCCACTAACTACAATTAATG+AGG - chr3_4:8926901-8926920 Msa0488790:CDS 30.0%
TCCTCATTAATTGTAGTTAG+TGG + chr3_4:8926905-8926924 None:intergenic 30.0%
CTCACAATATTAGTCGTTTA+AGG + chr3_4:8927002-8927021 None:intergenic 30.0%
AAACGACTAATATTGTGAGA+CGG - chr3_4:8927003-8927022 Msa0488790:CDS 30.0%
!! AGTTTTGTCATGTGAAAAGA+AGG - chr3_4:8927059-8927078 Msa0488790:intron 30.0%
! CTTTTCTCATATTACCAAGT+TGG + chr3_4:8927324-8927343 None:intergenic 30.0%
AGATTAGTAGATTCTTGGAT+CGG + chr3_4:8927457-8927476 None:intergenic 30.0%
TCTTGTGAAAATGATCAGAA+TGG - chr3_4:8927670-8927689 Msa0488790:intron 30.0%
!! TTGATTTGACTTGATGGAAT+TGG + chr3_4:8927728-8927747 None:intergenic 30.0%
TGTCAGTAATATGTGAGATT+TGG - chr3_4:8927849-8927868 Msa0488790:CDS 30.0%
TTTGTAGATTACTTGCCTTA+AGG + chr3_4:8927951-8927970 None:intergenic 30.0%
!! TTTTGGAAAGTAAATAAGCC+TGG - chr3_4:8928003-8928022 Msa0488790:intron 30.0%
AAGTAAATAAGCCTGGATTA+AGG - chr3_4:8928010-8928029 Msa0488790:intron 30.0%
AGTAAATAAGCCTGGATTAA+GGG - chr3_4:8928011-8928030 Msa0488790:intron 30.0%
!!! ATTTTAGTTTCCCTTAATCC+AGG + chr3_4:8928024-8928043 None:intergenic 30.0%
ATCGACGTTTCTCAATTTAA+TGG + chr3_4:8928165-8928184 None:intergenic 30.0%
!!! TTGAAAGACGTTTATTTTGG+TGG + chr3_4:8928201-8928220 None:intergenic 30.0%
!! AATAGTCTTGTGCAACATTA+AGG - chr3_4:8928250-8928269 Msa0488790:intron 30.0%
!! ATAGTCTTGTGCAACATTAA+GGG - chr3_4:8928251-8928270 Msa0488790:intron 30.0%
CTCTTCACTATGCAATAATT+GGG + chr3_4:8928486-8928505 None:intergenic 30.0%
TCTCTTCACTATGCAATAAT+TGG + chr3_4:8928487-8928506 None:intergenic 30.0%
GTGTAACTAACTAGATAACT+TGG + chr3_4:8928550-8928569 None:intergenic 30.0%
ACAATGTCACTAATACAGTT+AGG + chr3_4:8928576-8928595 None:intergenic 30.0%
! CATTTGGTTCCTTCATAATA+TGG - chr3_4:8928693-8928712 Msa0488790:intron 30.0%
CTAATACTTCAGTATCTGAT+CGG + chr3_4:8928748-8928767 None:intergenic 30.0%
! GATCAGATACTGAAGTATTA+GGG - chr3_4:8928747-8928766 Msa0488790:intron 30.0%
! CTTATGATTTTTACGGGAAA+TGG + chr3_4:8928774-8928793 None:intergenic 30.0%
CATTTCCCGTAAAAATCATA+AGG - chr3_4:8928772-8928791 Msa0488790:intron 30.0%
TCAAATAGGTATGAAAAGGA+AGG - chr3_4:8928866-8928885 Msa0488790:CDS 30.0%
! TCATGTTATGTTTCTGATGA+TGG - chr3_4:8929016-8929035 Msa0488790:CDS 30.0%
TTCTGAATTTGCAAGGAAAT+GGG - chr3_4:8929075-8929094 Msa0488790:CDS 30.0%
! GTCAATTGTACATGATTTTC+AGG + chr3_4:8929312-8929331 None:intergenic 30.0%
ATTAACCACATTCACATATG+TGG - chr3_4:8929381-8929400 Msa0488790:intron 30.0%
TTTAACCACATATGTGAATG+TGG + chr3_4:8929389-8929408 None:intergenic 30.0%
GTAGATGTCATATGTTTATC+AGG - chr3_4:8930075-8930094 Msa0488790:intron 30.0%
! AGGTTTTCTTAGGTGAAAAT+GGG - chr3_4:8930095-8930114 Msa0488790:intron 30.0%
!! TGTATGTTTCTAGAGAAAAG+AGG - chr3_4:8930155-8930174 Msa0488790:CDS 30.0%
TTCAATCACCAAAAAAAAGC+TGG - chr3_4:8930184-8930203 Msa0488790:CDS 30.0%
ATTGCTTACCAATGCATTTA+GGG + chr3_4:8930212-8930231 None:intergenic 30.0%
TATTGCTTACCAATGCATTT+AGG + chr3_4:8930213-8930232 None:intergenic 30.0%
TAGAATTGTCAATGCATTAG+AGG + chr3_4:8930631-8930650 None:intergenic 30.0%
CATTGACAATTCTATGAAAC+AGG - chr3_4:8930637-8930656 Msa0488790:intron 30.0%
TAGTCTAAGTTCAACACAAA+AGG + chr3_4:8930692-8930711 None:intergenic 30.0%
TCATTACATCAACAATAGCA+AGG - chr3_4:8930715-8930734 Msa0488790:CDS 30.0%
! CAAATCCTTTTTCCTACTAA+TGG + chr3_4:8930773-8930792 None:intergenic 30.0%
CAATTCTCACAAAGATTTGA+TGG - chr3_4:8930800-8930819 Msa0488790:CDS 30.0%
ATAAACATGAAAGGTTTGGA+TGG - chr3_4:8930975-8930994 Msa0488790:intron 30.0%
TTTAGAAGACAAGCACTTTA+TGG - chr3_4:8931035-8931054 Msa0488790:intron 30.0%
AAATCGGTAAGTTAGTTGAT+TGG - chr3_4:8931346-8931365 Msa0488790:intron 30.0%
!! TTAGTTGATTGGTTTGATGT+CGG - chr3_4:8931357-8931376 Msa0488790:intron 30.0%
! TGATGTCGGTTATATTACAA+TGG - chr3_4:8931371-8931390 Msa0488790:intron 30.0%
! GATGTCGGTTATATTACAAT+GGG - chr3_4:8931372-8931391 Msa0488790:intron 30.0%
TAACACGAAAAAGAATTCAC+GGG + chr3_4:8931540-8931559 None:intergenic 30.0%
! TGAACTATAGTTGGTTCAAA+TGG - chr3_4:8931586-8931605 Msa0488790:CDS 30.0%
ATCAATTAAACCTAGCTTAC+GGG - chr3_4:8931669-8931688 Msa0488790:intron 30.0%
TGAGTAGATGCAATGAAAAT+TGG + chr3_4:8931938-8931957 None:intergenic 30.0%
TTTCATTGCATCTACTCAAT+TGG - chr3_4:8931940-8931959 Msa0488790:intron 30.0%
CTATGAAGAGAAAACAGAAT+GGG - chr3_4:8932036-8932055 Msa0488790:intron 30.0%
TATGAAGAGAAAACAGAATG+GGG - chr3_4:8932037-8932056 Msa0488790:intron 30.0%
CACTTATCATATAAGCGTTT+AGG - chr3_4:8932133-8932152 Msa0488790:intron 30.0%
GTTACAGAAGATATCTTAAC+AGG - chr3_4:8932352-8932371 Msa0488790:intron 30.0%
ACTTTAAATGCAGTTCTTTC+AGG + chr3_4:8932421-8932440 None:intergenic 30.0%
TCTACAACAAGTCTTTCAAT+GGG - chr3_4:8932468-8932487 Msa0488790:intron 30.0%
TTTGCTCATGAATATGTCAA+TGG + chr3_4:8932503-8932522 None:intergenic 30.0%
AAACATTGTCCAATTTGGTA+TGG - chr3_4:8932520-8932539 Msa0488790:intron 30.0%
CCTTTATATCCATACCAAAT+TGG + chr3_4:8932532-8932551 None:intergenic 30.0%
CCAATTTGGTATGGATATAA+AGG - chr3_4:8932529-8932548 Msa0488790:intron 30.0%
ATTTGGTATGGATATAAAGG+AGG - chr3_4:8932532-8932551 Msa0488790:intron 30.0%
GATATAAAGGAGGATTAAAG+TGG - chr3_4:8932542-8932561 Msa0488790:intron 30.0%
TGGAAAATTTATCATTCCTG+AGG - chr3_4:8932660-8932679 Msa0488790:CDS 30.0%
CTACAAGAAAATCACAGATA+CGG + chr3_4:8932712-8932731 None:intergenic 30.0%
!! AATGAGCAATTTTGGGTAAT+TGG - chr3_4:8932922-8932941 Msa0488790:intron 30.0%
AACAAAAGATGATGAAGACA+AGG - chr3_4:8933035-8933054 Msa0488790:intron 30.0%
!! AGATAATGTTTGGTTTGAAG+TGG - chr3_4:8933067-8933086 Msa0488790:intron 30.0%
TTGTCACATGCAATTAACAA+TGG - chr3_4:8933153-8933172 Msa0488790:intron 30.0%
!!! AACAATGGTTTTGAATCATG+GGG - chr3_4:8933168-8933187 Msa0488790:intron 30.0%
! GGAAACTAATGTTTTCCTTT+TGG - chr3_4:8933202-8933221 Msa0488790:intron 30.0%
GTATGACTGGAAAGAATAAT+AGG - chr3_4:8933256-8933275 Msa0488790:intron 30.0%
!! TGATATAGGAGTGTTATTAG+AGG - chr3_4:8933433-8933452 Msa0488790:CDS 30.0%
GAGGAAAACTAGATATTGTT+TGG - chr3_4:8933452-8933471 Msa0488790:CDS 30.0%
AACTAGATATTGTTTGGTTG+TGG - chr3_4:8933458-8933477 Msa0488790:CDS 30.0%
ACTAGATATTGTTTGGTTGT+GGG - chr3_4:8933459-8933478 Msa0488790:CDS 30.0%
!! TTATGCATGATGATTTGGTG+TGG - chr3_4:8925191-8925210 Msa0488790:CDS 35.0%
ACAGATTTGCAAGAGTTAGA+TGG - chr3_4:8925230-8925249 Msa0488790:intron 35.0%
AACTATGTGGAGAAGACATA+GGG - chr3_4:8925264-8925283 Msa0488790:intron 35.0%
TTATGAGTATGAAAGAAGGG+AGG - chr3_4:8925352-8925371 Msa0488790:intron 35.0%
TATGAGTATGAAAGAAGGGA+GGG - chr3_4:8925353-8925372 Msa0488790:intron 35.0%
! TTTTGCATTGAGGACAAACT+TGG + chr3_4:8925382-8925401 None:intergenic 35.0%
AACCAAATTTAAGCGTCTCA+AGG - chr3_4:8925400-8925419 Msa0488790:CDS 35.0%
ACCAAATTTAAGCGTCTCAA+GGG - chr3_4:8925401-8925420 Msa0488790:CDS 35.0%
CCACTTATTCACCTTGTAAA+AGG + chr3_4:8925873-8925892 None:intergenic 35.0%
! CCTTTTACAAGGTGAATAAG+TGG - chr3_4:8925870-8925889 Msa0488790:intron 35.0%
!!! TGAGCTTATTTTAGTTGGCA+GGG + chr3_4:8925942-8925961 None:intergenic 35.0%
TGCCAACTAAAATAAGCTCA+CGG - chr3_4:8925942-8925961 Msa0488790:intron 35.0%
TTACAAGAGATTCAAGGACA+AGG + chr3_4:8926025-8926044 None:intergenic 35.0%
GGTACGTACTTTCAAAATTG+TGG + chr3_4:8926130-8926149 None:intergenic 35.0%
ATGTAGTCCACTACTTTATG+TGG + chr3_4:8926151-8926170 None:intergenic 35.0%
!! CCTTTTGATTCTCAATTGAC+CGG - chr3_4:8926401-8926420 Msa0488790:intron 35.0%
!! CTTTTGATTCTCAATTGACC+GGG - chr3_4:8926402-8926421 Msa0488790:intron 35.0%
GTTAGACTGATCACCTTTAT+TGG - chr3_4:8926659-8926678 Msa0488790:intron 35.0%
TACAAGCTAGAACCCAATAA+AGG + chr3_4:8926675-8926694 None:intergenic 35.0%
AGGTTTGTGCACGATTATTA+AGG + chr3_4:8926982-8927001 None:intergenic 35.0%
! TTTTGCATGCATGCACTTAT+TGG - chr3_4:8927114-8927133 Msa0488790:intron 35.0%
TTTATTGCAAGCAAGACCAA+TGG - chr3_4:8927216-8927235 Msa0488790:CDS 35.0%
TCCAAGAATCTACTAATCTG+AGG - chr3_4:8927458-8927477 Msa0488790:intron 35.0%
CCAAGAATCTACTAATCTGA+GGG - chr3_4:8927459-8927478 Msa0488790:intron 35.0%
CAAGAATCTACTAATCTGAG+GGG - chr3_4:8927460-8927479 Msa0488790:intron 35.0%
!!! GTTTTGCTCTGGCTTTAAAT+GGG + chr3_4:8927514-8927533 None:intergenic 35.0%
!!! AGTTTTGCTCTGGCTTTAAA+TGG + chr3_4:8927515-8927534 None:intergenic 35.0%
TGATCAGAATGGATGAATCA+AGG - chr3_4:8927681-8927700 Msa0488790:intron 35.0%
!! TACGGATTGATTTGACTTGA+TGG + chr3_4:8927734-8927753 None:intergenic 35.0%
AAAGCATATGCATTGTCTAC+TGG + chr3_4:8927821-8927840 None:intergenic 35.0%
TAGACAATGCATATGCTTTG+TGG - chr3_4:8927822-8927841 Msa0488790:intron 35.0%
! AGATTTGGTTCACTCTTTCA+TGG - chr3_4:8927864-8927883 Msa0488790:CDS 35.0%
TTCTTGATCAGTTCTCAAAG+TGG - chr3_4:8927888-8927907 Msa0488790:CDS 35.0%
!!! AAGACGTTTATTTTGGTGGA+GGG + chr3_4:8928197-8928216 None:intergenic 35.0%
!!! AAAGACGTTTATTTTGGTGG+AGG + chr3_4:8928198-8928217 None:intergenic 35.0%
CTTAGCGATCAAATTAGAGA+CGG - chr3_4:8928451-8928470 Msa0488790:intron 35.0%
GATCGGAAGTAAATAAAGTC+TGG + chr3_4:8928731-8928750 None:intergenic 35.0%
! CGATCAGATACTGAAGTATT+AGG - chr3_4:8928746-8928765 Msa0488790:intron 35.0%
TCAATTGGTGAAAGTTGTGA+TGG + chr3_4:8928896-8928915 None:intergenic 35.0%
! ACTAGAGGAGACTCTTTTAA+TGG + chr3_4:8928941-8928960 None:intergenic 35.0%
AATAGATTACCCTGCTGAAA+AGG - chr3_4:8928991-8929010 Msa0488790:CDS 35.0%
AGCAGCAATGTTAACATTTG+AGG - chr3_4:8929039-8929058 Msa0488790:CDS 35.0%
CTGAAACTTCTGAATTTGCA+AGG - chr3_4:8929068-8929087 Msa0488790:CDS 35.0%
CTTCTGAATTTGCAAGGAAA+TGG - chr3_4:8929074-8929093 Msa0488790:CDS 35.0%
TTCTCAGCAAAATACCATTC+TGG + chr3_4:8929139-8929158 None:intergenic 35.0%
TGGTCACGAATATTATTTCC+AGG + chr3_4:8929698-8929717 None:intergenic 35.0%
AATAATATTCGTGACCATCC+AGG - chr3_4:8929701-8929720 Msa0488790:intron 35.0%
AAAATATTATGTGGCCCTAG+TGG - chr3_4:8929898-8929917 Msa0488790:intron 35.0%
! CAGGTTTTCTTAGGTGAAAA+TGG - chr3_4:8930094-8930113 Msa0488790:intron 35.0%
! GGTTTTCTTAGGTGAAAATG+GGG - chr3_4:8930096-8930115 Msa0488790:intron 35.0%
! GTTTTCTTAGGTGAAAATGG+GGG - chr3_4:8930097-8930116 Msa0488790:intron 35.0%
CTAGATTCACACATAATGTG+TGG - chr3_4:8930355-8930374 Msa0488790:intron 35.0%
ACGGTCATTATTTGACGAAA+GGG + chr3_4:8930510-8930529 None:intergenic 35.0%
TACGGTCATTATTTGACGAA+AGG + chr3_4:8930511-8930530 None:intergenic 35.0%
TTTCGTCAAATAATGACCGT+AGG - chr3_4:8930510-8930529 Msa0488790:intron 35.0%
AATTGTCAATGCATTAGAGG+CGG + chr3_4:8930628-8930647 None:intergenic 35.0%
AGAAGCAATGTGTTTCATGA+TGG - chr3_4:8930745-8930764 Msa0488790:CDS 35.0%
!! TTCATGATGGATCCATTAGT+AGG - chr3_4:8930758-8930777 Msa0488790:CDS 35.0%
TGGATCCATTAGTAGGAAAA+AGG - chr3_4:8930765-8930784 Msa0488790:CDS 35.0%
AAAGGTTTGGATGGTATTCA+AGG - chr3_4:8930984-8931003 Msa0488790:intron 35.0%
ATTCAAGGACCTACATATGT+TGG - chr3_4:8930999-8931018 Msa0488790:intron 35.0%
!!! TTTATGGTTTTGATGCTCCT+AGG - chr3_4:8931051-8931070 Msa0488790:intron 35.0%
! TTTTGTGCCTTCTTTTTCCT+AGG + chr3_4:8931071-8931090 None:intergenic 35.0%
ACTCTGAATCATCTGTTGTT+GGG - chr3_4:8931213-8931232 Msa0488790:intron 35.0%
! AGTCGTAAATCAACTTTTCG+TGG + chr3_4:8931410-8931429 None:intergenic 35.0%
!!! TTCTTTTTTGGCGGAAATCA+GGG + chr3_4:8931466-8931485 None:intergenic 35.0%
GAGTTGTGTGATATTAGTTC+AGG + chr3_4:8931502-8931521 None:intergenic 35.0%
GTAGGAAATGAAGATGAAGA+TGG - chr3_4:8931863-8931882 Msa0488790:intron 35.0%
GCTATGAAGAGAAAACAGAA+TGG - chr3_4:8932035-8932054 Msa0488790:intron 35.0%
GTGTTTATGACTGTTTGCAT+TGG + chr3_4:8932275-8932294 None:intergenic 35.0%
! TTCTTTTTCTTCGTTCAGGT+TGG - chr3_4:8932313-8932332 Msa0488790:intron 35.0%
GGTTTCAAAATGCATTGTCA+TGG - chr3_4:8932373-8932392 Msa0488790:intron 35.0%
TCAAAATGCATTGTCATGGA+TGG - chr3_4:8932377-8932396 Msa0488790:intron 35.0%
! CTTGTTGTAGACCATTAGAA+AGG + chr3_4:8932459-8932478 None:intergenic 35.0%
GTCTACAACAAGTCTTTCAA+TGG - chr3_4:8932467-8932486 Msa0488790:intron 35.0%
TGAGCAAACATTGTCCAATT+TGG - chr3_4:8932515-8932534 Msa0488790:intron 35.0%
GAGGATTAAAGTGGTTAGAA+AGG - chr3_4:8932551-8932570 Msa0488790:intron 35.0%
!! GCTTTTGTTGTCATTGAGTT+TGG - chr3_4:8932745-8932764 Msa0488790:CDS 35.0%
TTAGTAATACAGCTGGAATG+TGG - chr3_4:8932815-8932834 Msa0488790:intron 35.0%
GTGGAGTTACAATTGATGAA+TGG - chr3_4:8932893-8932912 Msa0488790:intron 35.0%
GAGTTACAATTGATGAATGG+TGG - chr3_4:8932896-8932915 Msa0488790:intron 35.0%
! GTGGAGAAATGAGCAATTTT+GGG - chr3_4:8932915-8932934 Msa0488790:intron 35.0%
!! AGTTGCTATTTACACCTGTT+AGG + chr3_4:8932996-8933015 None:intergenic 35.0%
AACATAATTGCTATGGTTGC+TGG - chr3_4:8933129-8933148 Msa0488790:intron 35.0%
AATCATGGGGACCATTATTT+GGG - chr3_4:8933181-8933200 Msa0488790:intron 35.0%
CACTTGTTTCCATTCCTTAA+AGG - chr3_4:8933234-8933253 Msa0488790:intron 35.0%
TCTTTCCAGTCATACCTTTA+AGG + chr3_4:8933251-8933270 None:intergenic 35.0%
GATTGACCAAACAAGAACAA+TGG + chr3_4:8933289-8933308 None:intergenic 35.0%
ATCATTCTTCTCTGTCTTGT+GGG - chr3_4:8933317-8933336 Msa0488790:intron 35.0%
! AAAATTGGACCAGTTGACTT+AGG + chr3_4:8933363-8933382 None:intergenic 35.0%
!! GGTCCAATTTTAGAAGAATG+TGG - chr3_4:8933372-8933391 Msa0488790:intron 35.0%
!!! ACCAATTTTGGGTTAGTTGC+AGG - chr3_4:8924574-8924593 Msa0488790:three_prime_UTR 40.0%
GGTCAAACATGTCAACTATG+TGG - chr3_4:8925251-8925270 Msa0488790:intron 40.0%
CAACTATGTGGAGAAGACAT+AGG - chr3_4:8925263-8925282 Msa0488790:intron 40.0%
ACTATGTGGAGAAGACATAG+GGG - chr3_4:8925265-8925284 Msa0488790:intron 40.0%
ATTCATTGCAAGCCACAAAG+GGG + chr3_4:8925307-8925326 None:intergenic 40.0%
CATTCATTGCAAGCCACAAA+GGG + chr3_4:8925308-8925327 None:intergenic 40.0%
ACATTCATTGCAAGCCACAA+AGG + chr3_4:8925309-8925328 None:intergenic 40.0%
ACCCTTGAGACGCTTAAATT+TGG + chr3_4:8925405-8925424 None:intergenic 40.0%
!!! GTGAGCTTATTTTAGTTGGC+AGG + chr3_4:8925943-8925962 None:intergenic 40.0%
GCCAACTAAAATAAGCTCAC+GGG - chr3_4:8925943-8925962 Msa0488790:intron 40.0%
CCAACTAAAATAAGCTCACG+GGG - chr3_4:8925944-8925963 Msa0488790:intron 40.0%
GTACGTACCACATAAAGTAG+TGG - chr3_4:8926141-8926160 Msa0488790:CDS 40.0%
CCGGTCAATTGAGAATCAAA+AGG + chr3_4:8926404-8926423 None:intergenic 40.0%
TAGAGTTGAAGGAGATGAAG+AGG - chr3_4:8926451-8926470 Msa0488790:intron 40.0%
AGAATTACCTCAGGAGACAT+GGG + chr3_4:8926548-8926567 None:intergenic 40.0%
AAGAATTACCTCAGGAGACA+TGG + chr3_4:8926549-8926568 None:intergenic 40.0%
AAATCCACACACACAACTCT+GGG + chr3_4:8926700-8926719 None:intergenic 40.0%
AAAATCCACACACACAACTC+TGG + chr3_4:8926701-8926720 None:intergenic 40.0%
GACAATAATTGTGAGACGGA+GGG + chr3_4:8926763-8926782 None:intergenic 40.0%
AGACAATAATTGTGAGACGG+AGG + chr3_4:8926764-8926783 None:intergenic 40.0%
GACTAATATTGTGAGACGGA+GGG - chr3_4:8927007-8927026 Msa0488790:CDS 40.0%
ATGCATGCACTTATTGGAAC+AGG - chr3_4:8927120-8927139 Msa0488790:intron 40.0%
TGCATGCACTTATTGGAACA+GGG - chr3_4:8927121-8927140 Msa0488790:intron 40.0%
AAGCAAAGACAGAACCAACT+TGG - chr3_4:8927307-8927326 Msa0488790:CDS 40.0%
TGAAGACTTGGATAAGAGTG+TGG - chr3_4:8927369-8927388 Msa0488790:CDS 40.0%
CCCTCAGATTAGTAGATTCT+TGG + chr3_4:8927462-8927481 None:intergenic 40.0%
AATCAAGGCAACCATTGTCA+AGG - chr3_4:8927696-8927715 Msa0488790:intron 40.0%
ATTGGCAACTTCCTTGACAA+TGG + chr3_4:8927710-8927729 None:intergenic 40.0%
AAAGTGGTTTCCTGTCATGA+GGG - chr3_4:8927904-8927923 Msa0488790:CDS 40.0%
TAAGGAAAGCCTGTCAAGAT+AGG + chr3_4:8927933-8927952 None:intergenic 40.0%
ATCTTGACAGGCTTTCCTTA+AGG - chr3_4:8927933-8927952 Msa0488790:CDS 40.0%
! AACATGACACCTTTTCAGCA+GGG + chr3_4:8929003-8929022 None:intergenic 40.0%
! TAACATGACACCTTTTCAGC+AGG + chr3_4:8929004-8929023 None:intergenic 40.0%
!! AAATACCATTCTGGAGCTCT+AGG + chr3_4:8929130-8929149 None:intergenic 40.0%
GAAAGAGAGAAGAGCAATGA+AGG - chr3_4:8929198-8929217 Msa0488790:intron 40.0%
TTGTTTAAGGATCCTGCAAG+TGG + chr3_4:8929249-8929268 None:intergenic 40.0%
!! GGTTAAATGTGTCGAGTTGA+TGG - chr3_4:8929402-8929421 Msa0488790:intron 40.0%
TCTAGTTGCAAAGGCTAAGA+AGG - chr3_4:8929631-8929650 Msa0488790:intron 40.0%
CTAAGAAGGTTCCAGAAGAA+GGG - chr3_4:8929645-8929664 Msa0488790:intron 40.0%
CAATGCAAGATGGAATGTTG+TGG - chr3_4:8929672-8929691 Msa0488790:intron 40.0%
TAACCTGTATCATTCCTGGA+TGG + chr3_4:8929718-8929737 None:intergenic 40.0%
TCACTAACCTGTATCATTCC+TGG + chr3_4:8929722-8929741 None:intergenic 40.0%
TGATAAGAGAAGGTCCACTA+GGG + chr3_4:8929915-8929934 None:intergenic 40.0%
TTGATAAGAGAAGGTCCACT+AGG + chr3_4:8929916-8929935 None:intergenic 40.0%
TGGAAATGAATTGCCACGTT+TGG - chr3_4:8930132-8930151 Msa0488790:CDS 40.0%
CTAGAAACATACACCAAACG+TGG + chr3_4:8930148-8930167 None:intergenic 40.0%
!!! TTAGGGCTCCAGCTTTTTTT+TGG + chr3_4:8930195-8930214 None:intergenic 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr3_4:8930332-8930351 Msa0488790:CDS 40.0%
TATGTGTGAATCTAGCCACT+AGG + chr3_4:8930350-8930369 None:intergenic 40.0%
ACACATAATGTGTGGAGAAG+TGG - chr3_4:8930363-8930382 Msa0488790:intron 40.0%
CACATAATGTGTGGAGAAGT+GGG - chr3_4:8930364-8930383 Msa0488790:intron 40.0%
ACATAATGTGTGGAGAAGTG+GGG - chr3_4:8930365-8930384 Msa0488790:intron 40.0%
! TACCAGGGATAATTTGTGCA+GGG + chr3_4:8930412-8930431 None:intergenic 40.0%
TACCAACTGAGCTACACTTA+CGG - chr3_4:8930434-8930453 Msa0488790:intron 40.0%
!! CTGTGTCATGCGATTTTGAT+CGG - chr3_4:8930538-8930557 Msa0488790:intron 40.0%
AGAGGCGGTTTAATTGAAGT+CGG + chr3_4:8930613-8930632 None:intergenic 40.0%
! GTTCAACACAAAAGGTGCAT+TGG + chr3_4:8930684-8930703 None:intergenic 40.0%
CATCCTGTTCCAACATATGT+AGG + chr3_4:8931011-8931030 None:intergenic 40.0%
TGATGCTCCTAGGAAAAAGA+AGG - chr3_4:8931061-8931080 Msa0488790:intron 40.0%
!! TGGCTAAAGTGTTGTTGTTG+TGG - chr3_4:8931107-8931126 Msa0488790:intron 40.0%
! TTGTTGTGGATTGTGTTGCA+TGG - chr3_4:8931121-8931140 Msa0488790:intron 40.0%
! TGTTGTGGATTGTGTTGCAT+GGG - chr3_4:8931122-8931141 Msa0488790:intron 40.0%
CACTCTGAATCATCTGTTGT+TGG - chr3_4:8931212-8931231 Msa0488790:intron 40.0%
!! TCTGTTGTTGGGAGTACTAA+AGG - chr3_4:8931224-8931243 Msa0488790:intron 40.0%
!! AGGGAGTGGATTGAAATCAA+TGG + chr3_4:8931443-8931462 None:intergenic 40.0%
!!! CTTCTTTTTTGGCGGAAATC+AGG + chr3_4:8931467-8931486 None:intergenic 40.0%
GCATCTACTCAATTGGTTGA+TGG - chr3_4:8931947-8931966 Msa0488790:intron 40.0%
GAAAACAGAATGGGGAAAAG+AGG - chr3_4:8932045-8932064 Msa0488790:intron 40.0%
!!! TTTTCTTCGTTCAGGTTGGA+TGG - chr3_4:8932317-8932336 Msa0488790:intron 40.0%
TCCATGGACATCAATACCTT+TGG - chr3_4:8932600-8932619 Msa0488790:intron 40.0%
!! ACCAAAGGTATTGATGTCCA+TGG + chr3_4:8932604-8932623 None:intergenic 40.0%
ATGGACATCAATACCTTTGG+TGG - chr3_4:8932603-8932622 Msa0488790:intron 40.0%
AGAGTACAATATGCCACCAA+AGG + chr3_4:8932619-8932638 None:intergenic 40.0%
ATGCAGCTTAGTAATACAGC+TGG - chr3_4:8932808-8932827 Msa0488790:intron 40.0%
! GGTGGAGAAATGAGCAATTT+TGG - chr3_4:8932914-8932933 Msa0488790:intron 40.0%
!! GAGCAATTTTGGGTAATTGG+AGG - chr3_4:8932925-8932944 Msa0488790:intron 40.0%
GGTCTATTCAAAGTCCTAAC+AGG - chr3_4:8932979-8932998 Msa0488790:intron 40.0%
GAATCATGGGGACCATTATT+TGG - chr3_4:8933180-8933199 Msa0488790:intron 40.0%
CAAGTGAACAATCACCCAAA+AGG + chr3_4:8933220-8933239 None:intergenic 40.0%
! CCAGTCATACCTTTAAGGAA+TGG + chr3_4:8933246-8933265 None:intergenic 40.0%
! CCATTCCTTAAAGGTATGAC+TGG - chr3_4:8933243-8933262 Msa0488790:intron 40.0%
CTCCTACCATTGTTCTTGTT+TGG - chr3_4:8933280-8933299 Msa0488790:intron 40.0%
GACCAAACAAGAACAATGGT+AGG + chr3_4:8933285-8933304 None:intergenic 40.0%
CATCATTCTTCTCTGTCTTG+TGG - chr3_4:8933316-8933335 Msa0488790:intron 40.0%
! CCAGTTGACTTAGGCAAAAA+TGG + chr3_4:8933354-8933373 None:intergenic 40.0%
!! CCATTTTTGCCTAAGTCAAC+TGG - chr3_4:8933351-8933370 Msa0488790:intron 40.0%
! ATTGTTTGGTTGTGGGTTGT+AGG - chr3_4:8933466-8933485 Msa0488790:exon 40.0%
! TTGTTTGGTTGTGGGTTGTA+GGG - chr3_4:8933467-8933486 Msa0488790:exon 40.0%
GGTGCATAGCTAGCACTAAA+TGG - chr3_4:8924549-8924568 Msa0488790:three_prime_UTR 45.0%
GCCTGCAACTAACCCAAAAT+TGG + chr3_4:8924578-8924597 None:intergenic 45.0%
AACTATATATGTGTGGGCGC+AGG + chr3_4:8925159-8925178 None:intergenic 45.0%
GACATAGGGGTTAATGCAGA+TGG - chr3_4:8925278-8925297 Msa0488790:intron 45.0%
!!! CCCCGTGAGCTTATTTTAGT+TGG + chr3_4:8925947-8925966 None:intergenic 45.0%
TTCAAAACTCATGCCACACC+CGG + chr3_4:8926423-8926442 None:intergenic 45.0%
!!! GGTGTGGCATGAGTTTTGAA+GGG - chr3_4:8926423-8926442 Msa0488790:intron 45.0%
AGTTGAAGGAGATGAAGAGG+AGG - chr3_4:8926454-8926473 Msa0488790:intron 45.0%
AATCCACACACACAACTCTG+GGG + chr3_4:8926699-8926718 None:intergenic 45.0%
CGACTAATATTGTGAGACGG+AGG - chr3_4:8927006-8927025 Msa0488790:CDS 45.0%
AAGACCAATGGATCCTTCCA+AGG - chr3_4:8927228-8927247 Msa0488790:CDS 45.0%
TTCCATAGCCATAAGCAGCT+AGG + chr3_4:8927255-8927274 None:intergenic 45.0%
!! ATGGCTATGGAAGTGTTGCT+TGG - chr3_4:8927263-8927282 Msa0488790:CDS 45.0%
!! CTATGGAAGTGTTGCTTGGA+AGG - chr3_4:8927267-8927286 Msa0488790:CDS 45.0%
!! GAAGTGTTGCTTGGAAGGAT+AGG - chr3_4:8927272-8927291 Msa0488790:CDS 45.0%
! TGTTGCTTGGAAGGATAGGA+TGG - chr3_4:8927276-8927295 Msa0488790:CDS 45.0%
GGAAGGATAGGATGGAGATA+TGG - chr3_4:8927284-8927303 Msa0488790:CDS 45.0%
AGCCAGAGCAAAACTCTGTA+TGG - chr3_4:8927520-8927539 Msa0488790:intron 45.0%
! GTCCATACAGAGTTTTGCTC+TGG + chr3_4:8927525-8927544 None:intergenic 45.0%
CAAAGTGGTTTCCTGTCATG+AGG - chr3_4:8927903-8927922 Msa0488790:CDS 45.0%
AGATAGGTTTCCCTCATGAC+AGG + chr3_4:8927917-8927936 None:intergenic 45.0%
TGAGGGAAACCTATCTTGAC+AGG - chr3_4:8927921-8927940 Msa0488790:CDS 45.0%
!! ACTGTGTTTGCTGTCACTAG+AGG + chr3_4:8928956-8928975 None:intergenic 45.0%
TTGAACCTAGAGCTCCAGAA+TGG - chr3_4:8929122-8929141 Msa0488790:CDS 45.0%
TTAAGGATCCTGCAAGTGGA+CGG + chr3_4:8929245-8929264 None:intergenic 45.0%
GCTAAGAAGGTTCCAGAAGA+AGG - chr3_4:8929644-8929663 Msa0488790:intron 45.0%
TGACCATCCAGGAATGATAC+AGG - chr3_4:8929712-8929731 Msa0488790:intron 45.0%
! CTATAGAGATGGTAGTGCAG+AGG + chr3_4:8930015-8930034 None:intergenic 45.0%
TGAAAATGGGGGATGTGACA+TGG - chr3_4:8930108-8930127 Msa0488790:CDS 45.0%
! ACCAGGGATAATTTGTGCAG+GGG + chr3_4:8930411-8930430 None:intergenic 45.0%
! CTACCAGGGATAATTTGTGC+AGG + chr3_4:8930413-8930432 None:intergenic 45.0%
ACCAACTGAGCTACACTTAC+GGG - chr3_4:8930435-8930454 Msa0488790:intron 45.0%
GCATGACACAGATCTTCCTA+CGG + chr3_4:8930529-8930548 None:intergenic 45.0%
GCGGTTTAATTGAAGTCGGA+CGG + chr3_4:8930609-8930628 None:intergenic 45.0%
GGACCTACATATGTTGGAAC+AGG - chr3_4:8931005-8931024 Msa0488790:intron 45.0%
GATTGTGTTGCATGGGAAAG+AGG - chr3_4:8931129-8931148 Msa0488790:intron 45.0%
!! TTTTTGGCGGAAATCAGGGA+GGG + chr3_4:8931462-8931481 None:intergenic 45.0%
!!! TTTTTTGGCGGAAATCAGGG+AGG + chr3_4:8931463-8931482 None:intergenic 45.0%
!!! CACACAACTCAGCTTTTTCG+TGG - chr3_4:8931512-8931531 Msa0488790:CDS 45.0%
ACTAGTGAAACCCGTAAGCT+AGG + chr3_4:8931682-8931701 None:intergenic 45.0%
GATGGTGAGACACTAAAGCA+TGG - chr3_4:8931965-8931984 Msa0488790:intron 45.0%
GTGAGACACTAAAGCATGGT+GGG - chr3_4:8931969-8931988 Msa0488790:intron 45.0%
GCCATACATGTCATTAGCTG+TGG - chr3_4:8932013-8932032 Msa0488790:intron 45.0%
GCCACAGCTAATGACATGTA+TGG + chr3_4:8932017-8932036 None:intergenic 45.0%
!! GTTCAGGTTGGATGGATCTA+TGG - chr3_4:8932325-8932344 Msa0488790:intron 45.0%
! CAAGTCTTTCAATGGGCTCT+TGG - chr3_4:8932475-8932494 Msa0488790:intron 45.0%
TCGAAAAGGCTTCATACCTC+AGG + chr3_4:8932679-8932698 None:intergenic 45.0%
!! GAAGCCTTTTCGAGCGTTTT+TGG - chr3_4:8932686-8932705 Msa0488790:CDS 45.0%
CAAGTGTGCTAGAGATGAGA+TGG - chr3_4:8932869-8932888 Msa0488790:intron 45.0%
!!! TTTTTTTTTTTTAAAAAACT+CGG - chr3_4:8927428-8927447 Msa0488790:intron 5.0%
!! AATAAATTATTTAAAAGATA+AGG - chr3_4:8929159-8929178 Msa0488790:CDS 5.0%
!!! TTTTTTGTTTTTTTTTTTTT+TGG - chr3_4:8930316-8930335 Msa0488790:CDS 5.0%
!!! ACTTTATTATTATTTTTTTT+TGG - chr3_4:8930902-8930921 Msa0488790:intron 5.0%
AAGGGCTGAAGTTCGAATCC+TGG + chr3_4:8925901-8925920 None:intergenic 50.0%
GATTCTCAATTGACCGGGTG+TGG - chr3_4:8926407-8926426 Msa0488790:intron 50.0%
!! GGGTGTGGCATGAGTTTTGA+AGG - chr3_4:8926422-8926441 Msa0488790:intron 50.0%
! GAAGGGTGTGCTAGAGTTGA+AGG - chr3_4:8926440-8926459 Msa0488790:intron 50.0%
GCAAATTCCCATGTCTCCTG+AGG - chr3_4:8926538-8926557 Msa0488790:intron 50.0%
TAACCCCAGAGTTGTGTGTG+TGG - chr3_4:8926693-8926712 Msa0488790:intron 50.0%
GCACTTATTGGAACAGGGTG+AGG - chr3_4:8927126-8927145 Msa0488790:intron 50.0%
AGGTCCTTGGAAGGATCCAT+TGG + chr3_4:8927235-8927254 None:intergenic 50.0%
TAAGCAGCTAGGTCCTTGGA+AGG + chr3_4:8927244-8927263 None:intergenic 50.0%
TCCAAGGACCTAGCTGCTTA+TGG - chr3_4:8927244-8927263 Msa0488790:CDS 50.0%
GACCTAGCTGCTTATGGCTA+TGG - chr3_4:8927250-8927269 Msa0488790:CDS 50.0%
ATGGACTTGCCCACCGAAAT+TGG - chr3_4:8927539-8927558 Msa0488790:intron 50.0%
AGTGATCAAGTTCGATCCCC+TGG + chr3_4:8927567-8927586 None:intergenic 50.0%
! TGGTGGAGAGTATGAGTCCA+CGG - chr3_4:8928053-8928072 Msa0488790:intron 50.0%
TATGAGTCCACGGACTCGAA+TGG - chr3_4:8928063-8928082 Msa0488790:intron 50.0%
AATGAGTCCATTCGAGTCCG+TGG + chr3_4:8928073-8928092 None:intergenic 50.0%
AGAAGGTTCCAGAAGAAGGG+TGG - chr3_4:8929648-8929667 Msa0488790:intron 50.0%
TGCATTGTCCACCCTTCTTC+TGG + chr3_4:8929659-8929678 None:intergenic 50.0%
GAAGGGTGGACAATGCAAGA+TGG - chr3_4:8929662-8929681 Msa0488790:intron 50.0%
CAAGATGGAATGTTGTGGCC+TGG - chr3_4:8929677-8929696 Msa0488790:intron 50.0%
AATGGGGGATGTGACATGGA+TGG - chr3_4:8930112-8930131 Msa0488790:CDS 50.0%
AGCTGGAGCCCTAAATGCAT+TGG - chr3_4:8930201-8930220 Msa0488790:CDS 50.0%
! GATAATTTGTGCAGGGGCTG+GGG + chr3_4:8930405-8930424 None:intergenic 50.0%
! GGATAATTTGTGCAGGGGCT+GGG + chr3_4:8930406-8930425 None:intergenic 50.0%
!! AGCTCAGTTGGTAGCTACCA+GGG + chr3_4:8930427-8930446 None:intergenic 50.0%
!! TAGCTCAGTTGGTAGCTACC+AGG + chr3_4:8930428-8930447 None:intergenic 50.0%
TCCCGTAAGTGTAGCTCAGT+TGG + chr3_4:8930439-8930458 None:intergenic 50.0%
GGTGAGACACTAAAGCATGG+TGG - chr3_4:8931968-8931987 Msa0488790:intron 50.0%
CCAGTAAGCAAGCAAACAGC+AGG + chr3_4:8932643-8932662 None:intergenic 50.0%
! CCTGCTGTTTGCTTGCTTAC+TGG - chr3_4:8932640-8932659 Msa0488790:CDS 50.0%
ACGGCCAAAAACGCTCGAAA+AGG + chr3_4:8932693-8932712 None:intergenic 50.0%
GTGCTAGAGATGAGATGGAG+TGG - chr3_4:8932874-8932893 Msa0488790:intron 50.0%
TGCAGATGGTGACCCCTTTG+TGG - chr3_4:8925292-8925311 Msa0488790:intron 55.0%
! GGTGAATAAGTGGGGTGTCC+AGG - chr3_4:8925880-8925899 Msa0488790:intron 55.0%
GCCATAAGCAGCTAGGTCCT+TGG + chr3_4:8927248-8927267 None:intergenic 55.0%
TCAATCCCACCGTCCACTTG+CGG - chr3_4:8927484-8927503 Msa0488790:intron 55.0%
! CGATCCCCTGGTGCCAATTT+CGG + chr3_4:8927555-8927574 None:intergenic 55.0%
CAATCCTACCGTCCACTTGC+AGG - chr3_4:8929234-8929253 Msa0488790:intron 55.0%
GTGTGGAGAAGTGGGGAATC+CGG - chr3_4:8930372-8930391 Msa0488790:intron 55.0%
TGTGGAGAAGTGGGGAATCC+GGG - chr3_4:8930373-8930392 Msa0488790:intron 55.0%
! GGGATAATTTGTGCAGGGGC+TGG + chr3_4:8930407-8930426 None:intergenic 55.0%
GCCCCTGCACAAATTATCCC+TGG - chr3_4:8930407-8930426 Msa0488790:intron 55.0%
CAATCCCACCGTCCACTTGC+GGG - chr3_4:8927485-8927504 Msa0488790:intron 60.0%
AATCCCACCGTCCACTTGCG+GGG - chr3_4:8927486-8927505 Msa0488790:intron 60.0%
TTAAATGGGCCCCCCGCAAG+TGG + chr3_4:8927500-8927519 None:intergenic 60.0%
TGCCCACCGAAATTGGCACC+AGG - chr3_4:8927546-8927565 Msa0488790:intron 60.0%
GCCCACCGAAATTGGCACCA+GGG - chr3_4:8927547-8927566 Msa0488790:intron 60.0%
! CCCCTGGTGCCAATTTCGGT+GGG + chr3_4:8927551-8927570 None:intergenic 60.0%
CCCACCGAAATTGGCACCAG+GGG - chr3_4:8927548-8927567 Msa0488790:intron 60.0%
! TCCCCTGGTGCCAATTTCGG+TGG + chr3_4:8927552-8927571 None:intergenic 60.0%
GGATCCTGCAAGTGGACGGT+AGG + chr3_4:8929241-8929260 None:intergenic 60.0%
GTGGAGAAGTGGGGAATCCG+GGG - chr3_4:8930374-8930393 Msa0488790:intron 60.0%
ATCCCACCGTCCACTTGCGG+GGG - chr3_4:8927487-8927506 Msa0488790:intron 65.0%
GGCGGAAATCAGGGAGGGAG+TGG + chr3_4:8931457-8931476 None:intergenic 65.0%
TCCCACCGTCCACTTGCGGG+GGG - chr3_4:8927488-8927507 Msa0488790:intron 70.0%
ATGGGCCCCCCGCAAGTGGA+CGG + chr3_4:8927496-8927515 None:intergenic 70.0%
CAGGGGCTGGGGTTCAACCC+CGG + chr3_4:8930394-8930413 None:intergenic 70.0%
GCCCCCCGCAAGTGGACGGT+GGG + chr3_4:8927492-8927511 None:intergenic 75.0%
! GGCCCCCCGCAAGTGGACGG+TGG + chr3_4:8927493-8927512 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 8924530 8933522 8924530 ID=Msa0488790;Name=Msa0488790
chr3_4 mRNA 8924530 8933522 8924530 ID=Msa0488790-mRNA-1;Parent=Msa0488790;Name=Msa0488790-mRNA-1;_AED=0.05;_eAED=0.05;_QI=38|1|1|1|1|1|13|112|1057
chr3_4 exon 8924530 8925238 8924530 ID=Msa0488790-mRNA-1:exon:2908;Parent=Msa0488790-mRNA-1
chr3_4 exon 8925371 8925721 8925371 ID=Msa0488790-mRNA-1:exon:2907;Parent=Msa0488790-mRNA-1
chr3_4 exon 8925986 8926185 8925986 ID=Msa0488790-mRNA-1:exon:2906;Parent=Msa0488790-mRNA-1
chr3_4 exon 8926807 8927077 8926807 ID=Msa0488790-mRNA-1:exon:2905;Parent=Msa0488790-mRNA-1
chr3_4 exon 8927181 8927393 8927181 ID=Msa0488790-mRNA-1:exon:2904;Parent=Msa0488790-mRNA-1
chr3_4 exon 8927830 8927955 8927830 ID=Msa0488790-mRNA-1:exon:2903;Parent=Msa0488790-mRNA-1
chr3_4 exon 8928319 8928456 8928319 ID=Msa0488790-mRNA-1:exon:2902;Parent=Msa0488790-mRNA-1
chr3_4 exon 8928833 8929178 8928833 ID=Msa0488790-mRNA-1:exon:2901;Parent=Msa0488790-mRNA-1
chr3_4 exon 8930098 8930364 8930098 ID=Msa0488790-mRNA-1:exon:2900;Parent=Msa0488790-mRNA-1
chr3_4 exon 8930639 8930910 8930639 ID=Msa0488790-mRNA-1:exon:2899;Parent=Msa0488790-mRNA-1
chr3_4 exon 8931493 8931608 8931493 ID=Msa0488790-mRNA-1:exon:2898;Parent=Msa0488790-mRNA-1
chr3_4 exon 8932630 8932825 8932630 ID=Msa0488790-mRNA-1:exon:2897;Parent=Msa0488790-mRNA-1
chr3_4 exon 8933404 8933522 8933404 ID=Msa0488790-mRNA-1:exon:2896;Parent=Msa0488790-mRNA-1
chr3_4 five_prime_UTR 8933485 8933522 8933485 ID=Msa0488790-mRNA-1:five_prime_utr;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8933404 8933484 8933404 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8932630 8932825 8932630 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8931493 8931608 8931493 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8930639 8930910 8930639 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8930098 8930364 8930098 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8928833 8929178 8928833 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8928319 8928456 8928319 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8927830 8927955 8927830 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8927181 8927393 8927181 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8926807 8927077 8926807 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8925986 8926185 8925986 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8925371 8925721 8925371 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 CDS 8924642 8925238 8924642 ID=Msa0488790-mRNA-1:cds;Parent=Msa0488790-mRNA-1
chr3_4 three_prime_UTR 8924530 8924641 8924530 ID=Msa0488790-mRNA-1:three_prime_utr;Parent=Msa0488790-mRNA-1
Gene Sequence

>Msa0488790

ATGGAAACCAATTTTGGGTTAGTTGCAGGCTCTCACAACAAGAATGAATTCATTATCATACGTCAAGATGGTGACTATGCTAGAACAGATTTGCAAGAGTTAGATGGTCAAACATGTCAACTATGTGGAGAAGACATAGGGGTTAATGCAGATGGTGACCCCTTTGTGGCTTGCAATGAATGTGCATTTCCTGTTTGTAGAAATTGTTATGAGTATGAAAGAAGGGAGGGAAACCAAGTTTGTCCTCAATGCAAAACCAAATTTAAGCGTCTCAAGGGGTGTGCTAGAGTTGAAGGAGATGAAGAGGAGGATGACATTGATGATTTAGAGAATGAATTCGATTTTGATGGACGACATGAACAAGATCATATGCAAATTCCCATGTCTCCTGAGGGTGAGGAGCTGTCTGAAGAGCAACATGCTATAGTTCCTTTAATAAATTCAACAATTATGAGAAAAGAGATAACTTTATTGCAAGCAAGACCAATGGATCCTTCCAAGGACCTAGCTGCTTATGGCTATGGAAGTGTTGCTTGGAAGGATAGGATGGAGATATGGAAGCAAAGACAGAACCAACTTGGTAATATGAGAAAAGATGATAATGATAATGATAATGATAATGAAGACTTGGATAAGAGTGTGGATGATGACAATGAATTTCCTTTAATGGATGAATCAAGGCAACCATTGTCAAGGAAGTTGCCAATTCCATCAAGTCAAATCAATCCGTACCGTATGATCATAATAATAAGACTGATTGTTCTTGGATTCTTCTTCCAATATAGAATTATGAATCCAGTAGACAATGCATATGCTTTGTGGCTTGTGTCAGTAATATGTGAGATTTGGTTCACTCTTTCATGGATTCTTGATCAGTTCTCAAAGTGGTTTCCTGTCATGAGGGAAACCTATCTTGACAGGCTTTCCTTAAGGTATGAAAAGGAAGGTCAACCATCACAACTTTCACCAATTGATATATTTGTGACTACAAATGATCCATTAAAAGAGTCTCCTCTAGTGACAGCAAACACAGTTCTATCAATTCTAGCAATAGATTACCCTGCTGAAAAGGTGTCATGTTATGTTTCTGATGATGGAGCAGCAATGTTAACATTTGAGGCTTTATCTGAAACTTCTGAATTTGCAAGGAAATGGGTTCCTTTTTGTAAGAAGTTCAACATTGAACCTAGAGCTCCAGAATGGTATTTTGCTGAGAAAATAAATTATTTAAAAGATAAGGTGCATTCATCATTTGTGAAAGAGAGAAGAGCAATGAAGAGAGAATATGAAGAATTTAAAGTTAGAATTAATTCTCTAGTTGCAAAGGCTAAGAAGGTTCCAGAAGAAGGGTGGACAATGCAAGATGGAATGTTGTGGCCTGGAAATAATATTCGTGACCATCCAGGAATGATACAGGTTTTCTTAGGTGAAAATGGGGGATGTGACATGGATGGAAATGAATTGCCACGTTTGGTGTATGTTTCTAGAGAAAAGAGGCCTAACTTCAATCACCAAAAAAAAGCTGGAGCCCTAAATGCATTGGTTAGAGTGTCTTCTGTACTTTCCAATGCACCTTTTGTGTTGAACTTAGACTATAATCATTACATCAACAATAGCAAGGCTATTAGAGAAGCAATGTGTTTCATGATGGATCCATTAGTAGGAAAAAGGATTTGCTATGTTCAATTCTCACAAAGATTTGATGGGATTGACACTCATGACCAATATGCCAATCAAACAAATACATTTGTTGATATAAACATGAAAGGTTTGGATGGTATTCAAGGACCTACATATGTTGGAACAGGATGTGTATTTAGAAGACAAGCACTTTATGGTTTTGATGCTCCTAGGAAAAAGAAGGCACAAAACAAGACATGTAATTGTTGGCTAAAGTGTTGTTGTTGTGGATTGTGTTGCATGGGAAAGAGGAAGAAGAAAAAGATGAAAAAGTCTAAGTTTGAGTTAATGGATAGTAGTCATAGAAAAGTACACTCTGAATCATCTGTTGTTGGGAGTACTAAAGGAAATGAAGATGAAGATGGCTTGTCTCTAATCTCAAGTCAAAAGTTAGTCAAGAAATTTGGAGAATCTCCAATTTTCATTGCATCTACTCAATTGGTTGATGGTGAGACACTAAAGCATGGTGGGATTGCTTCTCAACTTACAGAAGCCATACATGTCATTAGCTGTGGCTATGAAGAGAAAACAGAATGGGGAAAAGAGGTTGGATGGATCTATGGTTCAGTTACAGAAGATATCTTAACAGGTTTCAAAATGCATTGTCATGGATGGAGATCTATATATTGCATTCCTGAAAGAACTGCATTTAAAGTATCTTCATCAAATAACCTTTCTAATGGTCTACAACAAGTCTTTCAATGGGCTCTTGGATCCATTGACATATTCATGAGCAAACATTGTCCAATTTGGTATGGATATAAAGGAGGATTAAAGTGGTTAGAAAGGATTTCTTACATAAATGCTATTGTATATCCATGGACATCAATACCTTTGGTGGCATATTGTACTCTTCCTGCTGTTTGCTTGCTTACTGGAAAATTTATCATTCCTGAGCTTAGTAATACAGCTGGAATGTGGTTTATTTCACTTTTCATTTGCATTTTCACAACAAGTGTGCTAGAGATGAGATGGAGTGGAGTTACAATTGATGAATGGTGGAGAAATGAGCAATTTTGGGTAATTGGAGGTGTTTCAGCAAATTTATATGCTGTATTTGTAGGTCTATTCAAAGTCCTAACAGGTGTAAATAGCAACTTCATTGTAACATCAAAATCAACAAAAGATGATGAAGACAAGGAACATAATGAGATAATGTTTGGTTTGAAGTGGACAACATTATTAATCATACCAACAACATTGCTTATATTAAACATAATTGCTATGGTTGCTGGATTGTCACATGCAATTAACAATGGTTTTGAATCATGGGGACCATTATTTGGGAAACTAATGTTTTCCTTTTGGGTGATTGTTCACTTGTTTCCATTCCTTAAAGGTATGACTGGAAAGAATAATAGGACTCCTACCATTGTTCTTGTTTGGTCAATCTTGCTTGCATCATTCTTCTCTGTCTTGTGGGTGAAAATTGATCCATTTTTGCCTAAGTCAACTGGTCCAATTTTAGAAGAATGTGGATTGGATTGTAACTAA
Protein sequence

>Msa0488790

METNFGLVAGSHNKNEFIIIRQDGDYARTDLQELDGQTCQLCGEDIGVNADGDPFVACNECAFPVCRNCYEYERREGNQVCPQCKTKFKRLKGCARVEGDEEEDDIDDLENEFDFDGRHEQDHMQIPMSPEGEELSEEQHAIVPLINSTIMRKEITLLQARPMDPSKDLAAYGYGSVAWKDRMEIWKQRQNQLGNMRKDDNDNDNDNEDLDKSVDDDNEFPLMDESRQPLSRKLPIPSSQINPYRMIIIIRLIVLGFFFQYRIMNPVDNAYALWLVSVICEIWFTLSWILDQFSKWFPVMRETYLDRLSLRYEKEGQPSQLSPIDIFVTTNDPLKESPLVTANTVLSILAIDYPAEKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKFNIEPRAPEWYFAEKINYLKDKVHSSFVKERRAMKREYEEFKVRINSLVAKAKKVPEEGWTMQDGMLWPGNNIRDHPGMIQVFLGENGGCDMDGNELPRLVYVSREKRPNFNHQKKAGALNALVRVSSVLSNAPFVLNLDYNHYINNSKAIREAMCFMMDPLVGKRICYVQFSQRFDGIDTHDQYANQTNTFVDINMKGLDGIQGPTYVGTGCVFRRQALYGFDAPRKKKAQNKTCNCWLKCCCCGLCCMGKRKKKKMKKSKFELMDSSHRKVHSESSVVGSTKGNEDEDGLSLISSQKLVKKFGESPIFIASTQLVDGETLKHGGIASQLTEAIHVISCGYEEKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIYCIPERTAFKVSSSNNLSNGLQQVFQWALGSIDIFMSKHCPIWYGYKGGLKWLERISYINAIVYPWTSIPLVAYCTLPAVCLLTGKFIIPELSNTAGMWFISLFICIFTTSVLEMRWSGVTIDEWWRNEQFWVIGGVSANLYAVFVGLFKVLTGVNSNFIVTSKSTKDDEDKEHNEIMFGLKWTTLLIIPTTLLILNIIAMVAGLSHAINNGFESWGPLFGKLMFSFWVIVHLFPFLKGMTGKNNRTPTIVLVWSILLASFFSVLWVKIDPFLPKSTGPILEECGLDCN*