Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962180 | XP_003620151.3 | 96.054 | 811 | 27 | 2 | 1 | 807 | 1 | 810 | 0.0 | 1592 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962180 | sp|Q8VY16|CDP1_ARATH | 57.987 | 745 | 282 | 10 | 77 | 807 | 91 | 818 | 0.0 | 813 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032120 | Msa0962180 | 0.810070 | 1.383894e-50 | -8.615850e-47 |
| Msa0032400 | Msa0962180 | 0.808037 | 3.771239e-50 | -8.615850e-47 |
| Msa0044220 | Msa0962180 | 0.805551 | 1.264015e-49 | -8.615850e-47 |
| Msa0105420 | Msa0962180 | 0.821138 | 4.734161e-53 | -8.615850e-47 |
| Msa0120330 | Msa0962180 | 0.835426 | 1.690143e-56 | -8.615850e-47 |
| Msa0638280 | Msa0962180 | 0.818075 | 2.368028e-52 | -8.615850e-47 |
| Msa0638320 | Msa0962180 | 0.803875 | 2.829709e-49 | -8.615850e-47 |
| Msa0754720 | Msa0962180 | -0.809765 | 1.609747e-50 | -8.615850e-47 |
| Msa0756630 | Msa0962180 | -0.801526 | 8.636842e-49 | -8.615850e-47 |
| Msa0149620 | Msa0962180 | 0.833893 | 4.104852e-56 | -8.615850e-47 |
| Msa0162050 | Msa0962180 | 0.818475 | 1.923016e-52 | -8.615850e-47 |
| Msa0183830 | Msa0962180 | 0.801447 | 8.965555e-49 | -8.615850e-47 |
| Msa0185700 | Msa0962180 | 0.802049 | 6.744800e-49 | -8.615850e-47 |
| Msa0235890 | Msa0962180 | 0.801298 | 9.617761e-49 | -8.615850e-47 |
| Msa0419820 | Msa0962180 | 0.808660 | 2.776338e-50 | -8.615850e-47 |
| Msa0425940 | Msa0962180 | 0.802683 | 4.993214e-49 | -8.615850e-47 |
| Msa0426020 | Msa0962180 | 0.819346 | 1.219011e-52 | -8.615850e-47 |
| Msa0426160 | Msa0962180 | 0.801854 | 7.398006e-49 | -8.615850e-47 |
| Msa0238890 | Msa0962180 | 0.820506 | 6.615933e-53 | -8.615850e-47 |
| Msa0320100 | Msa0962180 | 0.802514 | 5.410230e-49 | -8.615850e-47 |
| Msa0521880 | Msa0962180 | 0.800093 | 1.694311e-48 | -8.615850e-47 |
| Msa0546840 | Msa0962180 | 0.804122 | 2.514107e-49 | -8.615850e-47 |
| Msa0547760 | Msa0962180 | 0.805938 | 1.048284e-49 | -8.615850e-47 |
| Msa0574890 | Msa0962180 | 0.818120 | 2.313314e-52 | -8.615850e-47 |
| Msa0908050 | Msa0962180 | 0.804590 | 2.008576e-49 | -8.615850e-47 |
| Msa0962180 | Msa0969400 | 0.837199 | 5.983086e-57 | -8.615850e-47 |
| Msa0962180 | Msa0969700 | 0.832099 | 1.146492e-55 | -8.615850e-47 |
| Msa0962180 | Msa1000300 | 0.815529 | 8.824454e-52 | -8.615850e-47 |
| Msa0962180 | Msa1008490 | 0.810456 | 1.142654e-50 | -8.615850e-47 |
| Msa0962180 | Msa1012810 | 0.806017 | 1.008925e-49 | -8.615850e-47 |
| Msa0962180 | Msa1065370 | 0.801313 | 9.549787e-49 | -8.615850e-47 |
| Msa0962180 | Msa1129250 | 0.806818 | 6.839287e-50 | -8.615850e-47 |
| Msa0962180 | Msa1217860 | 0.814926 | 1.200920e-51 | -8.615850e-47 |
| Msa0962180 | Msa1221560 | 0.803418 | 3.520102e-49 | -8.615850e-47 |
| Msa0962180 | Msa1242650 | 0.800523 | 1.384784e-48 | -8.615850e-47 |
| Msa0962180 | Msa1321000 | 0.803661 | 3.134324e-49 | -8.615850e-47 |
| Msa0962180 | Msa1362510 | 0.803949 | 2.731324e-49 | -8.615850e-47 |
| Msa0962180 | Msa1398480 | 0.825828 | 3.787722e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962180 | MtrunA17_Chr6g0481781 | 96.054 | 811 | 27 | 2 | 1 | 807 | 1 | 810 | 0.0 | 1592 |
| Msa0962180 | MtrunA17_Chr1g0155851 | 24.590 | 793 | 462 | 25 | 73 | 804 | 76 | 793 | 7.15e-31 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0962180 | AT3G19180.1 | 57.987 | 745 | 282 | 10 | 77 | 807 | 91 | 818 | 0.0 | 813 |
| Msa0962180 | AT3G19180.2 | 57.252 | 655 | 249 | 10 | 77 | 717 | 91 | 728 | 0.0 | 717 |
| Msa0962180 | AT5G42480.1 | 24.873 | 788 | 457 | 24 | 79 | 804 | 84 | 798 | 2.48e-33 | 138 |
| Msa0962180 | AT5G42480.2 | 23.699 | 692 | 398 | 21 | 79 | 709 | 84 | 706 | 5.03e-23 | 105 |
Find 202 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAGTTCTTCCTCAAATT+TGG | 0.078551 | 6_3:+85086461 | Msa0962180:CDS |
| TGAAATTTCACTGAACAATT+AGG | 0.169026 | 6_3:+85081196 | Msa0962180:five_prime_UTR |
| TTGTTTGCCATTCCCTAATA+AGG | 0.180910 | 6_3:-85086980 | None:intergenic |
| GCACTCATCACAATGGAATT+TGG | 0.195030 | 6_3:+85086598 | Msa0962180:CDS |
| TCCAAAACGTAATTCAGTTT+TGG | 0.207284 | 6_3:+85085627 | Msa0962180:CDS |
| CTTCTGAGCATTAAAGAAAT+TGG | 0.209290 | 6_3:-85086319 | None:intergenic |
| GTTCAGCTGCTTCCTCTAAA+AGG | 0.220030 | 6_3:-85087850 | None:intergenic |
| CTGTAGGCCCTACATATATT+AGG | 0.225438 | 6_3:+85086802 | Msa0962180:CDS |
| GGAATACGAAGGGAAGATTT+AGG | 0.230794 | 6_3:-85083089 | None:intergenic |
| CCAGTTTCACATGGCGAAAT+TGG | 0.233873 | 6_3:+85081322 | Msa0962180:CDS |
| AGCCTCCTATACACATTAAT+AGG | 0.236538 | 6_3:-85086933 | None:intergenic |
| ACTTCCCAGAAAATAAATTT+AGG | 0.260881 | 6_3:-85088173 | None:intergenic |
| AAGCCCACACTTGTACTTCT+TGG | 0.262483 | 6_3:+85086754 | Msa0962180:CDS |
| ATGAGTTCTTCCTCAAATTT+GGG | 0.263982 | 6_3:+85086462 | Msa0962180:CDS |
| CCCAAAACTGAATTACGTTT+TGG | 0.265240 | 6_3:-85085628 | None:intergenic |
| GAAAGCGACGGTTGAAATTC+CGG | 0.265774 | 6_3:+85081474 | Msa0962180:CDS |
| TCAATCAATCAGTTCTTTAC+AGG | 0.267417 | 6_3:-85088261 | None:intergenic |
| CCAGGCATTTCACAATTTAC+TGG | 0.271029 | 6_3:+85084817 | Msa0962180:CDS |
| AATAACACGCATTACCATAT+TGG | 0.278320 | 6_3:+85086656 | Msa0962180:CDS |
| GAACGGAGGAAGTTGAAATT+TGG | 0.290033 | 6_3:+85081409 | Msa0962180:CDS |
| AAATTTCAACATTGTTGAAT+TGG | 0.291088 | 6_3:-85081181 | None:intergenic |
| AAGAAGCGGAAACCCTTATT+AGG | 0.292184 | 6_3:+85086967 | Msa0962180:CDS |
| CTTAACAATTTCATCTTTCT+CGG | 0.293408 | 6_3:-85082811 | None:intergenic |
| GAAATTTCACTGAACAATTA+GGG | 0.295523 | 6_3:+85081197 | Msa0962180:five_prime_UTR |
| AAGTGTACAGTTGCGAAAAT+TGG | 0.310280 | 6_3:+85083465 | Msa0962180:intron |
| AGGATCTTCTGATGGATGTT+AGG | 0.314087 | 6_3:+85083012 | Msa0962180:intron |
| CAGTTAGGCCATTTACTTCA+TGG | 0.321581 | 6_3:-85087028 | None:intergenic |
| AATTCCGGTTTCGTGTTATC+AGG | 0.323419 | 6_3:+85081489 | Msa0962180:CDS |
| TTGCAGGGTTCACTGCTATC+TGG | 0.323882 | 6_3:+85086516 | Msa0962180:CDS |
| GCTAACTCCTACTGATTTGC+AGG | 0.325031 | 6_3:+85086500 | Msa0962180:CDS |
| CGTCTTACCTATAGTAGTTT+GGG | 0.325373 | 6_3:-85087898 | None:intergenic |
| CCAATTTCGCCATGTGAAAC+TGG | 0.326759 | 6_3:-85081322 | None:intergenic |
| TCGTCTTACCTATAGTAGTT+TGG | 0.335353 | 6_3:-85087899 | None:intergenic |
| AGAAATTGTGAAATGTGATT+TGG | 0.337968 | 6_3:-85081131 | None:intergenic |
| AGATGATTTAGTTCTTTCTA+TGG | 0.340179 | 6_3:+85083340 | Msa0962180:CDS |
| TGTAGGCCCTACATATATTA+GGG | 0.342887 | 6_3:+85086803 | Msa0962180:CDS |
| AAATGCAATACAACCCAATA+TGG | 0.345322 | 6_3:-85086670 | None:intergenic |
| AACAATCAAAGCTGAAGCTC+TGG | 0.345889 | 6_3:+85086998 | Msa0962180:CDS |
| ATAACACGCATTACCATATT+GGG | 0.361568 | 6_3:+85086657 | Msa0962180:CDS |
| TTCAGGTTACCAGCATATTC+CGG | 0.361722 | 6_3:-85083053 | None:intergenic |
| GAATACGAAGGGAAGATTTA+GGG | 0.362467 | 6_3:-85083088 | None:intergenic |
| ATACCAGTCCAAGAAGAAAT+AGG | 0.364017 | 6_3:-85085246 | None:intergenic |
| GGAGAACAACCTTTAGTATC+TGG | 0.369320 | 6_3:-85086211 | None:intergenic |
| TTCACATGGCGAAATTGGTT+CGG | 0.369800 | 6_3:+85081327 | Msa0962180:CDS |
| GCCTCCTATACACATTAATA+GGG | 0.373871 | 6_3:-85086932 | None:intergenic |
| ATTCAAAGCATTCTACGTAT+AGG | 0.377210 | 6_3:+85088207 | Msa0962180:three_prime_UTR |
| CTGATAGAATGTCAGCTCTA+AGG | 0.377270 | 6_3:-85087793 | None:intergenic |
| CAATTGAATCACAGAATCTA+AGG | 0.379058 | 6_3:+85084903 | Msa0962180:CDS |
| CAGCATATTCCGGCTCAAAA+AGG | 0.380546 | 6_3:-85083043 | None:intergenic |
| CCCTTCGTATTCCTTGGTCT+TGG | 0.380905 | 6_3:+85083099 | Msa0962180:CDS |
| AATCTTCCCTTCGTATTCCT+TGG | 0.380984 | 6_3:+85083093 | Msa0962180:CDS |
| TAAAGGTTGTTCTCCAGCTT+TGG | 0.383435 | 6_3:+85086219 | Msa0962180:CDS |
| TCACATGGCGAAATTGGTTC+GGG | 0.383806 | 6_3:+85081328 | Msa0962180:CDS |
| GGGCCTAGCCATGAAGTAAA+TGG | 0.385491 | 6_3:+85087020 | Msa0962180:CDS |
| TTGCCTATTTCTTCTTGGAC+TGG | 0.390558 | 6_3:+85085243 | Msa0962180:CDS |
| CCACCTCGGCTTCCAGCATC+TGG | 0.391122 | 6_3:-85086879 | None:intergenic |
| TGTTTGCCATTCCCTAATAA+GGG | 0.391739 | 6_3:-85086979 | None:intergenic |
| AACTGAAGTTGAGGCTAACT+TGG | 0.394095 | 6_3:+85088143 | Msa0962180:three_prime_UTR |
| ATTCCTTGGTCTTGGTTGCC+CGG | 0.406997 | 6_3:+85083107 | Msa0962180:CDS |
| GATAGTTGATCTTCTTCCTT+GGG | 0.418181 | 6_3:+85084847 | Msa0962180:CDS |
| GACAAGAGAAATACCAATGA+TGG | 0.420419 | 6_3:-85085682 | None:intergenic |
| TCATCTTTCTCGGCTCGATC+AGG | 0.420717 | 6_3:-85082801 | None:intergenic |
| AAAAGAACCCAAACTACTAT+AGG | 0.424161 | 6_3:+85087891 | Msa0962180:CDS |
| GACAGCAAACCCCAAATTTG+AGG | 0.428769 | 6_3:-85086472 | None:intergenic |
| AAAAGTTTCACACCTGAGAT+AGG | 0.429400 | 6_3:-85083581 | None:intergenic |
| TCTGGAAGCAAGAATTCTAA+AGG | 0.431850 | 6_3:+85086348 | Msa0962180:CDS |
| TGTTTCCTACTATATGTCAT+AGG | 0.433486 | 6_3:+85086382 | Msa0962180:CDS |
| GGATGATGAGGTAAGAGTGC+TGG | 0.433771 | 6_3:-85086907 | None:intergenic |
| AGTAGCTCCAAGGTGCAAGC+AGG | 0.438710 | 6_3:-85084665 | None:intergenic |
| AGCCTCAACTTCAGTTATCC+TGG | 0.439331 | 6_3:-85088136 | None:intergenic |
| CATAGGCCTCTATCCTCATC+TGG | 0.440578 | 6_3:+85086399 | Msa0962180:CDS |
| AGATAGTTGATCTTCTTCCT+TGG | 0.440872 | 6_3:+85084846 | Msa0962180:CDS |
| GACATTCTATCAGATGGAAA+TGG | 0.441247 | 6_3:+85087803 | Msa0962180:CDS |
| GGGCAAGAATGGTTCGAACT+TGG | 0.444045 | 6_3:+85086722 | Msa0962180:CDS |
| GCTTGCCCCTGCTTGCACCT+TGG | 0.448595 | 6_3:+85084658 | Msa0962180:CDS |
| AGAACTAAATCATCTGCATA+TGG | 0.451871 | 6_3:-85083332 | None:intergenic |
| AGAAGCGGAAACCCTTATTA+GGG | 0.454598 | 6_3:+85086968 | Msa0962180:CDS |
| TTTACTTCTTAGAAGACATT+GGG | 0.456435 | 6_3:-85083535 | None:intergenic |
| TTTACGCGAATTGCTTAGAC+AGG | 0.458986 | 6_3:+85084742 | Msa0962180:CDS |
| TACTTTGCAGGATCTTCTGA+TGG | 0.459454 | 6_3:+85083004 | Msa0962180:intron |
| ATTCGTCAAGGACTTCAGTT+AGG | 0.459493 | 6_3:-85087043 | None:intergenic |
| ATAGTTGATCTTACCAAAGC+TGG | 0.464296 | 6_3:-85086232 | None:intergenic |
| TCTTTGACAGTGGCAAGCTT+TGG | 0.465670 | 6_3:+85087712 | Msa0962180:intron |
| GATTTATATCCAGATACTAA+AGG | 0.467252 | 6_3:+85086202 | Msa0962180:CDS |
| TTCAGCTGCTTCCTCTAAAA+GGG | 0.467815 | 6_3:-85087849 | None:intergenic |
| AGGGTTTCCGCTTCTTCCAC+AGG | 0.468138 | 6_3:-85086960 | None:intergenic |
| TTTGCTTCTATGAAGTTGTT+GGG | 0.470596 | 6_3:+85086690 | Msa0962180:CDS |
| ATTTGCTTCTATGAAGTTGT+TGG | 0.471201 | 6_3:+85086689 | Msa0962180:CDS |
| CGAGAAAGATGAAATTGTTA+AGG | 0.471649 | 6_3:+85082812 | Msa0962180:CDS |
| CCTCCCCTATTAATGTGTAT+AGG | 0.475135 | 6_3:+85086928 | Msa0962180:CDS |
| AGGCCATTTACTTCATGGCT+AGG | 0.476896 | 6_3:-85087023 | None:intergenic |
| AGCCAACTGTTAAAGTGAAA+AGG | 0.477075 | 6_3:+85086568 | Msa0962180:CDS |
| GGAATGAACCTGGGCAAGAA+TGG | 0.477784 | 6_3:+85086711 | Msa0962180:CDS |
| ACAATCAAAGCTGAAGCTCT+GGG | 0.478633 | 6_3:+85086999 | Msa0962180:CDS |
| GGATCTTCTGATGGATGTTA+GGG | 0.479063 | 6_3:+85083013 | Msa0962180:intron |
| TCAAAGCTTGTGCTGGACAT+TGG | 0.481912 | 6_3:+85083278 | Msa0962180:CDS |
| GAACTTCCCCTAATATATGT+AGG | 0.482824 | 6_3:-85086810 | None:intergenic |
| ATCACCTGATAACACGAAAC+CGG | 0.483492 | 6_3:-85081493 | None:intergenic |
| CATTGTGTATTTGACACTCC+GGG | 0.494055 | 6_3:+85088434 | Msa0962180:three_prime_UTR |
| CTGAACTTTGGCAGGAACTG+TGG | 0.497255 | 6_3:+85086161 | Msa0962180:intron |
| AATCTAGGGCACAGAGGAAG+AGG | 0.499258 | 6_3:+85085567 | Msa0962180:intron |
| ATTTGGAATGTCTGTTATGA+AGG | 0.500735 | 6_3:-85081114 | None:intergenic |
| TTCAGCTGTAAACCCATCAT+TGG | 0.503054 | 6_3:+85085669 | Msa0962180:CDS |
| AAGAAGGCCAGTCCTGTACT+TGG | 0.503886 | 6_3:-85084787 | None:intergenic |
| GTTTACTTCTTAGAAGACAT+TGG | 0.508398 | 6_3:-85083536 | None:intergenic |
| CCAGTAAATTGTGAAATGCC+TGG | 0.511406 | 6_3:-85084817 | None:intergenic |
| GATGATGAGGTAAGAGTGCT+GGG | 0.511730 | 6_3:-85086906 | None:intergenic |
| TTGAAGAAGGCATAGAGCAC+CGG | 0.511773 | 6_3:-85083126 | None:intergenic |
| CGGAGTGTCAAATACACAAT+GGG | 0.512538 | 6_3:-85088432 | None:intergenic |
| TGACGAATCTATGCTTGCTC+AGG | 0.512740 | 6_3:+85087058 | Msa0962180:CDS |
| TATATTAGGGGAAGTTCTGT+TGG | 0.518272 | 6_3:+85086816 | Msa0962180:CDS |
| GGGCGTTGTTGCATCTCGCC+AGG | 0.521722 | 6_3:+85082881 | Msa0962180:CDS |
| TGCTCTATGCCTTCTTCAAG+AGG | 0.523494 | 6_3:+85083130 | Msa0962180:CDS |
| TGGAGAATCAAAGCTTGTGC+TGG | 0.524566 | 6_3:+85083271 | Msa0962180:CDS |
| GAAGTTGTTGGGAATGAACC+TGG | 0.527034 | 6_3:+85086701 | Msa0962180:CDS |
| GAGAAGAACAAAGTATCTCA+AGG | 0.527974 | 6_3:+85083492 | Msa0962180:CDS |
| AGTTCGAACCATTCTTGCCC+AGG | 0.529171 | 6_3:-85086719 | None:intergenic |
| AGAGGCCTATGACATATAGT+AGG | 0.530465 | 6_3:-85086387 | None:intergenic |
| TTCTGTTGGCAACAAACTGA+AGG | 0.532277 | 6_3:+85086830 | Msa0962180:CDS |
| CCATTGTGTATTTGACACTC+CGG | 0.532771 | 6_3:+85088433 | Msa0962180:three_prime_UTR |
| ATTGACGAAGGTTACACAAT+GGG | 0.535307 | 6_3:+85082861 | Msa0962180:CDS |
| TGAAGCTTCATGCCAAGTAC+AGG | 0.535843 | 6_3:+85084775 | Msa0962180:CDS |
| CGGAAACCCTTATTAGGGAA+TGG | 0.536355 | 6_3:+85086973 | Msa0962180:CDS |
| AGAGGCAAGATGATGGATCA+TGG | 0.538393 | 6_3:+85088060 | Msa0962180:CDS |
| CTCGGCTTCCAGCATCTGGC+CGG | 0.538593 | 6_3:-85086875 | None:intergenic |
| AACTTCCCCTAATATATGTA+GGG | 0.543650 | 6_3:-85086809 | None:intergenic |
| CATATAGTAGGAAACATTTG+TGG | 0.547905 | 6_3:-85086375 | None:intergenic |
| CCAAGTGTACCTCTTGAAGA+AGG | 0.548611 | 6_3:-85083139 | None:intergenic |
| ACAGAACCAGATGAGGATAG+AGG | 0.549771 | 6_3:-85086405 | None:intergenic |
| CGAATGTTTGATAGCTTCAG+AGG | 0.551743 | 6_3:+85085192 | Msa0962180:CDS |
| CTAGCTAATGCTGCAGTGAT+CGG | 0.551845 | 6_3:+85081256 | Msa0962180:CDS |
| AACTTCAGTTATCCTGGACC+TGG | 0.552131 | 6_3:-85088130 | None:intergenic |
| CCAGAAAATAAATTTAGGAA+AGG | 0.554573 | 6_3:-85088168 | None:intergenic |
| TTTACAGCTCATATGGCACT+TGG | 0.555063 | 6_3:+85084959 | Msa0962180:CDS |
| AGAGCTGACATTCTATCAGA+TGG | 0.555858 | 6_3:+85087797 | Msa0962180:CDS |
| GTAGCTCCAAGGTGCAAGCA+GGG | 0.557814 | 6_3:-85084664 | None:intergenic |
| AATGCCTGGCTTAGAAAAGA+AGG | 0.558801 | 6_3:-85084803 | None:intergenic |
| TTGGCAGGAACTGTGGCTGA+AGG | 0.560030 | 6_3:+85086168 | Msa0962180:intron |
| GTGATGTTGTTCTTGAACGG+AGG | 0.560456 | 6_3:+85081395 | Msa0962180:CDS |
| TCGCCATGTGAAACTGGAAA+CGG | 0.561262 | 6_3:-85081316 | None:intergenic |
| ATTGGAAATTCGTAACACAT+TGG | 0.561436 | 6_3:-85081163 | None:intergenic |
| CGGCCAGATGCTGGAAGCCG+AGG | 0.561968 | 6_3:+85086876 | Msa0962180:CDS |
| CCCCTATTAATGTGTATAGG+AGG | 0.566826 | 6_3:+85086931 | Msa0962180:CDS |
| AAAGTGATGTTGTTCTTGAA+CGG | 0.567168 | 6_3:+85081392 | Msa0962180:CDS |
| TTTGTGTTGGGTCCTACGCT+GGG | 0.568790 | 6_3:+85081368 | Msa0962180:CDS |
| TTCCATTGTGATGAGTGCTA+AGG | 0.569129 | 6_3:-85086593 | None:intergenic |
| ATGCTGGTAACCTGAAGGAA+AGG | 0.573751 | 6_3:+85083060 | Msa0962180:CDS |
| TCATCTGCTAACTACACTGT+AGG | 0.579197 | 6_3:+85086786 | Msa0962180:CDS |
| TATACACACACACCAGGTCC+AGG | 0.581108 | 6_3:+85088118 | Msa0962180:three_prime_UTR |
| TGAAGAAGGCATAGAGCACC+GGG | 0.583279 | 6_3:-85083125 | None:intergenic |
| GGGGAATGAGAGTTCGCTCA+TGG | 0.583441 | 6_3:+85081231 | Msa0962180:exon |
| TCTTTCTATGGCACTAGCTG+AGG | 0.584125 | 6_3:+85083352 | Msa0962180:CDS |
| GTCCAGGATAACTGAAGTTG+AGG | 0.588303 | 6_3:+85088134 | Msa0962180:three_prime_UTR |
| GCTGATGCCTGTGGAAGAAG+CGG | 0.588776 | 6_3:+85086953 | Msa0962180:CDS |
| GTGTGAAAAGTGAAAACGTT+GGG | 0.588964 | 6_3:-85081054 | None:intergenic |
| CTTCATGCCAAGTACAGGAC+TGG | 0.591320 | 6_3:+85084780 | Msa0962180:CDS |
| AAATCCACTGTTGAAAGCGA+CGG | 0.595245 | 6_3:+85081462 | Msa0962180:CDS |
| AAGTTAAGTATGTTGTGAAG+AGG | 0.595970 | 6_3:+85088042 | Msa0962180:CDS |
| CCAGATGCTGGAAGCCGAGG+TGG | 0.596037 | 6_3:+85086879 | Msa0962180:CDS |
| ACAAGAGAAATACCAATGAT+GGG | 0.598404 | 6_3:-85085681 | None:intergenic |
| ATTAATAGGGGAGGATGATG+AGG | 0.599928 | 6_3:-85086919 | None:intergenic |
| GTTGTGAAGAGGCAAGATGA+TGG | 0.603501 | 6_3:+85088053 | Msa0962180:CDS |
| TCAACCGTCGCTTTCAACAG+TGG | 0.603567 | 6_3:-85081466 | None:intergenic |
| AATACGAAGGGAAGATTTAG+GGG | 0.605176 | 6_3:-85083087 | None:intergenic |
| ACGAAGACGAGGAGCAATTG+CGG | 0.609466 | 6_3:+85084718 | Msa0962180:CDS |
| CAGTCCAAGAAGTACAAGTG+TGG | 0.612685 | 6_3:-85086758 | None:intergenic |
| TCGTTCTACAGAACCAGATG+AGG | 0.615889 | 6_3:-85086412 | None:intergenic |
| TCTCCGTTTCCAGTTTCACA+TGG | 0.616078 | 6_3:+85081313 | Msa0962180:CDS |
| AGTGAACCCTGCAAATCAGT+AGG | 0.619099 | 6_3:-85086507 | None:intergenic |
| GTAGGCCCTACATATATTAG+GGG | 0.621444 | 6_3:+85086804 | Msa0962180:CDS |
| ACCAAGACCAAGGAATACGA+AGG | 0.622297 | 6_3:-85083100 | None:intergenic |
| ATCTGGATATAAATCAAGCA+CGG | 0.626275 | 6_3:-85086194 | None:intergenic |
| ATCACAGCTAAGCTATCCCA+AGG | 0.627615 | 6_3:-85084863 | None:intergenic |
| TGAGTTCTTCCTCAAATTTG+GGG | 0.628315 | 6_3:+85086463 | Msa0962180:CDS |
| CCTCCTATACACATTAATAG+GGG | 0.628581 | 6_3:-85086931 | None:intergenic |
| CCGGAGTGTCAAATACACAA+TGG | 0.628695 | 6_3:-85088433 | None:intergenic |
| GGAATATGCTGGTAACCTGA+AGG | 0.630723 | 6_3:+85083055 | Msa0962180:CDS |
| CCTATACACATTAATAGGGG+AGG | 0.634153 | 6_3:-85086928 | None:intergenic |
| CGAGCAACGCTATACAGAGA+AGG | 0.635288 | 6_3:-85081280 | None:intergenic |
| AACCTTAGCACTCATCACAA+TGG | 0.637900 | 6_3:+85086591 | Msa0962180:CDS |
| GAAAATGTTGAACGAAGACG+AGG | 0.639250 | 6_3:+85084707 | Msa0962180:CDS |
| AGTCCAAGAAGTACAAGTGT+GGG | 0.640643 | 6_3:-85086757 | None:intergenic |
| TCTGTTGGCAACAAACTGAA+GGG | 0.643143 | 6_3:+85086831 | Msa0962180:CDS |
| GAGCAAGCATAGATTCGTCA+AGG | 0.646455 | 6_3:-85087055 | None:intergenic |
| CCAAGACCAAGGAATACGAA+GGG | 0.651865 | 6_3:-85083099 | None:intergenic |
| CTAACTCCTACTGATTTGCA+GGG | 0.652573 | 6_3:+85086501 | Msa0962180:CDS |
| GAATGTTTGATAGCTTCAGA+GGG | 0.654418 | 6_3:+85085193 | Msa0962180:CDS |
| TAGCTCCAAGGTGCAAGCAG+GGG | 0.654906 | 6_3:-85084663 | None:intergenic |
| TGGCACGCTCAGTAGCTCCA+AGG | 0.658377 | 6_3:-85084675 | None:intergenic |
| TTACGCGAATTGCTTAGACA+GGG | 0.667864 | 6_3:+85084743 | Msa0962180:CDS |
| ATGATATATACACACACACC+AGG | 0.670969 | 6_3:+85088112 | Msa0962180:exon |
| GCACCGGGCAACCAAGACCA+AGG | 0.671698 | 6_3:-85083110 | None:intergenic |
| GTATAGGAGGCTGATGCCTG+TGG | 0.674492 | 6_3:+85086944 | Msa0962180:CDS |
| GAGTGCTGGGTAAACCACCT+CGG | 0.681671 | 6_3:-85086893 | None:intergenic |
| ATTGTGTATTTGACACTCCG+GGG | 0.683459 | 6_3:+85088435 | Msa0962180:three_prime_UTR |
| ATACGAAGGGAAGATTTAGG+GGG | 0.687120 | 6_3:-85083086 | None:intergenic |
| CAATCAAAGCTGAAGCTCTG+GGG | 0.688046 | 6_3:+85087000 | Msa0962180:CDS |
| GAAGAACTCATATATGAGCG+AGG | 0.689059 | 6_3:-85086450 | None:intergenic |
| AATTGACGAAGGTTACACAA+TGG | 0.699518 | 6_3:+85082860 | Msa0962180:CDS |
| ATCTTCAATCTAGGGCACAG+AGG | 0.701575 | 6_3:+85085561 | Msa0962180:intron |
| AAGTTGTTGGGAATGAACCT+GGG | 0.720411 | 6_3:+85086702 | Msa0962180:CDS |
| TGTGTGAAAAGTGAAAACGT+TGG | 0.766170 | 6_3:-85081055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTATTAGAGAAAAAA+TGG | + | chr6_3:85082438-85082457 | Msa0962180:intron | 10.0% |
| !! | GTCTATTATTTATATATTTA+GGG | + | chr6_3:85084096-85084115 | Msa0962180:intron | 10.0% |
| !! | ATATTTGATTATATAAAAAG+TGG | - | chr6_3:85087109-85087128 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTGAAAAAGCAA+AGG | + | chr6_3:85083917-85083936 | Msa0962180:intron | 15.0% |
| !! | GGTCTATTATTTATATATTT+AGG | + | chr6_3:85084095-85084114 | Msa0962180:intron | 15.0% |
| !! | ATTATTTATATATTTAGGGA+CGG | + | chr6_3:85084100-85084119 | Msa0962180:intron | 15.0% |
| !! | AGAAATACTAAATAAGTATA+CGG | - | chr6_3:85084420-85084439 | None:intergenic | 15.0% |
| !!! | CATATTTTATATCATCTTTT+TGG | + | chr6_3:85084465-85084484 | Msa0962180:intron | 15.0% |
| !!! | ATCATTTTGACTTTAATTAT+TGG | + | chr6_3:85085275-85085294 | Msa0962180:intron | 15.0% |
| !!! | TCTTTTTATCCTTTATTTTA+AGG | + | chr6_3:85086111-85086130 | Msa0962180:intron | 15.0% |
| !! | TTGAAATACTTAAAATTTGT+TGG | + | chr6_3:85087276-85087295 | Msa0962180:intron | 15.0% |
| !!! | TAATTTGAAGACATTTTTTA+GGG | - | chr6_3:85087381-85087400 | None:intergenic | 15.0% |
| !!! | TTAATTTGAAGACATTTTTT+AGG | - | chr6_3:85087382-85087401 | None:intergenic | 15.0% |
| !!! | ATTCATATTAAAGTTTTTTG+TGG | - | chr6_3:85087413-85087432 | None:intergenic | 15.0% |
| !!! | TTTTAGAAAATTAATGTTGT+TGG | + | chr6_3:85087442-85087461 | Msa0962180:intron | 15.0% |
| !! | AAATAAATAAAAACGAAAGT+GGG | - | chr6_3:85088400-85088419 | None:intergenic | 15.0% |
| !! | TAAATAAATAAAAACGAAAG+TGG | - | chr6_3:85088401-85088420 | None:intergenic | 15.0% |
| !! | AAATTTCAACATTGTTGAAT+TGG | - | chr6_3:85081184-85081203 | None:intergenic | 20.0% |
| !!! | CAAATGATGTTTTATGAAAT+TGG | + | chr6_3:85082302-85082321 | Msa0962180:intron | 20.0% |
| !!! | TAATTTTGTTTTGCTACATT+TGG | + | chr6_3:85082923-85082942 | Msa0962180:intron | 20.0% |
| !! | TCAAATATTTCCAAAAAACA+GGG | - | chr6_3:85083221-85083240 | None:intergenic | 20.0% |
| !! | TAATACGCTTAAAATTTGAA+GGG | - | chr6_3:85083699-85083718 | None:intergenic | 20.0% |
| !! | TTAATACGCTTAAAATTTGA+AGG | - | chr6_3:85083700-85083719 | None:intergenic | 20.0% |
| !! | TGGAAAAGTAATAAGTATTA+TGG | - | chr6_3:85083737-85083756 | None:intergenic | 20.0% |
| !!! | TTATTAGTTGGTTCTATAAA+AGG | - | chr6_3:85083760-85083779 | None:intergenic | 20.0% |
| !! | CAACTAATAAATACTGTTAT+GGG | + | chr6_3:85083770-85083789 | Msa0962180:intron | 20.0% |
| !! | AAAGGAATCATTAATTAAAC+AGG | + | chr6_3:85084188-85084207 | Msa0962180:intron | 20.0% |
| !! | TGATCTAAATTAGTTGTTAT+TGG | - | chr6_3:85084365-85084384 | None:intergenic | 20.0% |
| !!! | AAAAGAGTACTTATGATATA+AGG | - | chr6_3:85085076-85085095 | None:intergenic | 20.0% |
| !!! | TATATCATAAGTACTCTTTT+TGG | + | chr6_3:85085076-85085095 | Msa0962180:intron | 20.0% |
| !!! | ATATCATAAGTACTCTTTTT+GGG | + | chr6_3:85085077-85085096 | Msa0962180:intron | 20.0% |
| !! | TTATAAAAACAATAGGTATC+AGG | - | chr6_3:85085138-85085157 | None:intergenic | 20.0% |
| !! | GAAAAATAGAATCTCTAAAT+TGG | - | chr6_3:85085378-85085397 | None:intergenic | 20.0% |
| !! | ATTAATGTTATCTTCAATCT+AGG | + | chr6_3:85085552-85085571 | Msa0962180:intron | 20.0% |
| !! | TTAATGTTATCTTCAATCTA+GGG | + | chr6_3:85085553-85085572 | Msa0962180:intron | 20.0% |
| !! | TCAAGAAATTTGTGTAATAA+AGG | - | chr6_3:85085772-85085791 | None:intergenic | 20.0% |
| !!! | ATTTCAAAATTAGTGTGTTT+TGG | + | chr6_3:85085886-85085905 | Msa0962180:intron | 20.0% |
| !! | ATCATAGAACCTTAAAATAA+AGG | - | chr6_3:85086123-85086142 | None:intergenic | 20.0% |
| !! | ATAACATATATGATTATCTG+AGG | + | chr6_3:85087251-85087270 | Msa0962180:intron | 20.0% |
| !!! | AAAATTTGTTGGTTTATGAA+AGG | + | chr6_3:85087287-85087306 | Msa0962180:intron | 20.0% |
| !!! | AAATTTGTTGGTTTATGAAA+GGG | + | chr6_3:85087288-85087307 | Msa0962180:intron | 20.0% |
| !!! | CTTTCCTAAATTTATTTTCT+GGG | + | chr6_3:85088169-85088188 | Msa0962180:three_prime_UTR | 20.0% |
| ! | AGAAATTGTGAAATGTGATT+TGG | - | chr6_3:85081134-85081153 | None:intergenic | 25.0% |
| ! | TGAAATTTCACTGAACAATT+AGG | + | chr6_3:85081196-85081215 | Msa0962180:five_prime_UTR | 25.0% |
| ! | GAAATTTCACTGAACAATTA+GGG | + | chr6_3:85081197-85081216 | Msa0962180:five_prime_UTR | 25.0% |
| ! | TGATGAATTGAATGAATGTT+TGG | + | chr6_3:85081643-85081662 | Msa0962180:intron | 25.0% |
| ! | GATGAATTGAATGAATGTTT+GGG | + | chr6_3:85081644-85081663 | Msa0962180:intron | 25.0% |
| ! | TTCAAATCAAAAACATGTAC+CGG | - | chr6_3:85081964-85081983 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATTTGAAGTGT+TGG | + | chr6_3:85081968-85081987 | Msa0962180:intron | 25.0% |
| ! | ATAAGATAAATGATGTTGCA+TGG | + | chr6_3:85082072-85082091 | Msa0962180:intron | 25.0% |
| ! | CAACAATAAGTTTACTTGTT+AGG | - | chr6_3:85082346-85082365 | None:intergenic | 25.0% |
| ! | AGATTATGAGAATGTTACAA+TGG | + | chr6_3:85082374-85082393 | Msa0962180:intron | 25.0% |
| ! | ACACTATAACATAGATTTAG+AGG | + | chr6_3:85082561-85082580 | Msa0962180:intron | 25.0% |
| !!! | GTAGTTTTATTCTGCAATTT+TGG | + | chr6_3:85082583-85082602 | Msa0962180:intron | 25.0% |
| !!! | ATTTTTTTCCCATGTTATGA+AGG | + | chr6_3:85082678-85082697 | Msa0962180:intron | 25.0% |
| ! | CTTAACAATTTCATCTTTCT+CGG | - | chr6_3:85082814-85082833 | None:intergenic | 25.0% |
| ! | TGTAGCAAAACAAAATTAGT+TGG | - | chr6_3:85082921-85082940 | None:intergenic | 25.0% |
| !!! | ATTAATTTCTCCCTGTTTTT+TGG | + | chr6_3:85083208-85083227 | Msa0962180:intron | 25.0% |
| ! | GTCAAATATTTCCAAAAAAC+AGG | - | chr6_3:85083222-85083241 | None:intergenic | 25.0% |
| !!! | AGATGATTTAGTTCTTTCTA+TGG | + | chr6_3:85083340-85083359 | Msa0962180:CDS | 25.0% |
| ! | TTTACTTCTTAGAAGACATT+GGG | - | chr6_3:85083538-85083557 | None:intergenic | 25.0% |
| ! | ATAAAAAGTAATTTCTCGAG+AGG | - | chr6_3:85083671-85083690 | None:intergenic | 25.0% |
| !!! | TCTCGAGAAATTACTTTTTA+TGG | + | chr6_3:85083670-85083689 | Msa0962180:intron | 25.0% |
| !!! | CTCGAGAAATTACTTTTTAT+GGG | + | chr6_3:85083671-85083690 | Msa0962180:intron | 25.0% |
| ! | AATACGCTTAAAATTTGAAG+GGG | - | chr6_3:85083698-85083717 | None:intergenic | 25.0% |
| ! | CCATAACAGTATTTATTAGT+TGG | - | chr6_3:85083772-85083791 | None:intergenic | 25.0% |
| ! | CCAACTAATAAATACTGTTA+TGG | + | chr6_3:85083769-85083788 | Msa0962180:intron | 25.0% |
| !! | ATTTTTACCAGGAAAAGATT+AGG | + | chr6_3:85084130-85084149 | Msa0962180:intron | 25.0% |
| !!! | TTTTATATCATCTTTTTGGC+TGG | + | chr6_3:85084469-85084488 | Msa0962180:intron | 25.0% |
| !! | AACGTCTTTTAAATTGAATG+TGG | - | chr6_3:85084527-85084546 | None:intergenic | 25.0% |
| ! | CATTCAATTTAAAAGACGTT+AGG | + | chr6_3:85084527-85084546 | Msa0962180:intron | 25.0% |
| !! | AAAATGCTTATAAGCTTTGA+AGG | - | chr6_3:85085036-85085055 | None:intergenic | 25.0% |
| !! | ATGATATAAGGAGTATAGAA+GGG | - | chr6_3:85085064-85085083 | None:intergenic | 25.0% |
| !! | TATGATATAAGGAGTATAGA+AGG | - | chr6_3:85085065-85085084 | None:intergenic | 25.0% |
| !!! | TTAGGAATTGTTTGTTTTCA+CGG | + | chr6_3:85085317-85085336 | Msa0962180:intron | 25.0% |
| ! | AAAATGTCTAATGCTATGTT+TGG | - | chr6_3:85085449-85085468 | None:intergenic | 25.0% |
| !! | GACATTTTGAATTTGAATCT+TGG | + | chr6_3:85085461-85085480 | Msa0962180:intron | 25.0% |
| !!! | TCTTATTTTTGTTTTCCTTC+AGG | + | chr6_3:85085722-85085741 | Msa0962180:intron | 25.0% |
| ! | AAGAAATGAATCTTAGCATA+TGG | - | chr6_3:85085956-85085975 | None:intergenic | 25.0% |
| ! | GATTTATATCCAGATACTAA+AGG | + | chr6_3:85086202-85086221 | Msa0962180:CDS | 25.0% |
| ! | AATGTTGTTGGTATTATAGA+TGG | + | chr6_3:85087454-85087473 | Msa0962180:intron | 25.0% |
| ! | AAGTTTATTAGCTACAATGT+AGG | - | chr6_3:85087502-85087521 | None:intergenic | 25.0% |
| ! | CAAAGTAACATTTGGAAATA+AGG | + | chr6_3:85087586-85087605 | Msa0962180:intron | 25.0% |
| !! | ATAGTTATTGACTACTGATA+TGG | + | chr6_3:85087616-85087635 | Msa0962180:intron | 25.0% |
| !! | TTTTATGTTATCTTTGACAG+TGG | + | chr6_3:85087702-85087721 | Msa0962180:intron | 25.0% |
| ! | CCAGAAAATAAATTTAGGAA+AGG | - | chr6_3:85088171-85088190 | None:intergenic | 25.0% |
| !!! | CCTTTCCTAAATTTATTTTC+TGG | + | chr6_3:85088168-85088187 | Msa0962180:three_prime_UTR | 25.0% |
| ! | ACTTCCCAGAAAATAAATTT+AGG | - | chr6_3:85088176-85088195 | None:intergenic | 25.0% |
| !!! | TAAATTTATTTTCTGGGAAG+TGG | + | chr6_3:85088175-85088194 | Msa0962180:three_prime_UTR | 25.0% |
| !!! | AAATTTATTTTCTGGGAAGT+GGG | + | chr6_3:85088176-85088195 | Msa0962180:three_prime_UTR | 25.0% |
| ! | ATTTGGAATGTCTGTTATGA+AGG | - | chr6_3:85081117-85081136 | None:intergenic | 30.0% |
| ATTGGAAATTCGTAACACAT+TGG | - | chr6_3:85081166-85081185 | None:intergenic | 30.0% | |
| AAAGTGATGTTGTTCTTGAA+CGG | + | chr6_3:85081392-85081411 | Msa0962180:CDS | 30.0% | |
| TTGTATCTAAACACATGTGT+CGG | + | chr6_3:85081770-85081789 | Msa0962180:intron | 30.0% | |
| !! | ATGTTTTTGATCTGAAGTGT+TGG | + | chr6_3:85082197-85082216 | Msa0962180:intron | 30.0% |
| !! | CTAAGCTTTGAAGAAATCTT+TGG | + | chr6_3:85082261-85082280 | Msa0962180:intron | 30.0% |
| ! | TGTTTTATGAAATTGGATGC+TGG | + | chr6_3:85082309-85082328 | Msa0962180:intron | 30.0% |
| TTATGAGAATGTTACAATGG+AGG | + | chr6_3:85082377-85082396 | Msa0962180:intron | 30.0% | |
| AGAAAAAATGGAGATGTGTT+CGG | + | chr6_3:85082450-85082469 | Msa0962180:intron | 30.0% | |
| AGGCTTATAATTAGAGGTAA+AGG | + | chr6_3:85082514-85082533 | Msa0962180:intron | 30.0% | |
| ACATGGGAAAAAAATGCAAA+GGG | - | chr6_3:85082673-85082692 | None:intergenic | 30.0% | |
| AACATGGGAAAAAAATGCAA+AGG | - | chr6_3:85082674-85082693 | None:intergenic | 30.0% | |
| CGAGAAAGATGAAATTGTTA+AGG | + | chr6_3:85082812-85082831 | Msa0962180:CDS | 30.0% | |
| AACAGGGAGAAATTAATACA+CGG | - | chr6_3:85083205-85083224 | None:intergenic | 30.0% | |
| AGAACTAAATCATCTGCATA+TGG | - | chr6_3:85083335-85083354 | None:intergenic | 30.0% | |
| ATATACCCTATCCTTATCAT+AGG | + | chr6_3:85083432-85083451 | Msa0962180:intron | 30.0% | |
| TCAATAAGACACCTATGATA+AGG | - | chr6_3:85083446-85083465 | None:intergenic | 30.0% | |
| GTTTACTTCTTAGAAGACAT+TGG | - | chr6_3:85083539-85083558 | None:intergenic | 30.0% | |
| TTAAGTGTATATTCACTAGC+TGG | + | chr6_3:85083605-85083624 | Msa0962180:intron | 30.0% | |
| !! | TTAGTTGGTTCTATAAAAGG+TGG | - | chr6_3:85083757-85083776 | None:intergenic | 30.0% |
| ATGAAGAGTAAGAAAGTTGA+TGG | - | chr6_3:85083875-85083894 | None:intergenic | 30.0% | |
| TCTTCATGATTTAGTCAACA+GGG | + | chr6_3:85083888-85083907 | Msa0962180:intron | 30.0% | |
| ! | TTTATAGCCTAATCTTTTCC+TGG | - | chr6_3:85084140-85084159 | None:intergenic | 30.0% |
| CATTTCAACTACAAGGAAAA+AGG | + | chr6_3:85084170-85084189 | Msa0962180:intron | 30.0% | |
| TGAATCAGAAACAACAACTA+GGG | - | chr6_3:85084231-85084250 | None:intergenic | 30.0% | |
| TTGAATCAGAAACAACAACT+AGG | - | chr6_3:85084232-85084251 | None:intergenic | 30.0% | |
| ! | TGTTTCTGATTCAAGAACAT+TGG | + | chr6_3:85084238-85084257 | Msa0962180:intron | 30.0% |
| GTTTCTGATTCAAGAACATT+GGG | + | chr6_3:85084239-85084258 | Msa0962180:intron | 30.0% | |
| AATTTGCCATTGTGCAATTA+TGG | + | chr6_3:85084494-85084513 | Msa0962180:intron | 30.0% | |
| TGGAATGTGATAATACAAGA+GGG | - | chr6_3:85084565-85084584 | None:intergenic | 30.0% | |
| ATGGAATGTGATAATACAAG+AGG | - | chr6_3:85084566-85084585 | None:intergenic | 30.0% | |
| TCACGCATAAAATACTGATA+TGG | - | chr6_3:85084585-85084604 | None:intergenic | 30.0% | |
| CAATTGAATCACAGAATCTA+AGG | + | chr6_3:85084903-85084922 | Msa0962180:CDS | 30.0% | |
| ! | TAGAGTTTTTACAGCTCATA+TGG | + | chr6_3:85084952-85084971 | Msa0962180:CDS | 30.0% |
| !! | AAGGAAGGTATTATTGAAGA+AGG | - | chr6_3:85085017-85085036 | None:intergenic | 30.0% |
| ATAGAATCTCTAAATTGGAG+TGG | - | chr6_3:85085373-85085392 | None:intergenic | 30.0% | |
| ! | TTTCACGTCTAATTTTGCAT+TGG | + | chr6_3:85085394-85085413 | Msa0962180:intron | 30.0% |
| ! | TCCAAAACGTAATTCAGTTT+TGG | + | chr6_3:85085627-85085646 | Msa0962180:CDS | 30.0% |
| ! | CCAAAACGTAATTCAGTTTT+GGG | + | chr6_3:85085628-85085647 | Msa0962180:CDS | 30.0% |
| ! | CAAAACGTAATTCAGTTTTG+GGG | + | chr6_3:85085629-85085648 | Msa0962180:CDS | 30.0% |
| ACAAGAGAAATACCAATGAT+GGG | - | chr6_3:85085684-85085703 | None:intergenic | 30.0% | |
| CAGAAGCTAAATAAAAGCTA+AGG | - | chr6_3:85086022-85086041 | None:intergenic | 30.0% | |
| !! | CTTAGCTTTTATTTAGCTTC+TGG | + | chr6_3:85086020-85086039 | Msa0962180:intron | 30.0% |
| AGATAACAGCTAAAATTCGA+TGG | + | chr6_3:85086078-85086097 | Msa0962180:intron | 30.0% | |
| !!! | TTGAGTTTTTTGCTGAACTT+TGG | + | chr6_3:85086149-85086168 | Msa0962180:intron | 30.0% |
| ATCTGGATATAAATCAAGCA+CGG | - | chr6_3:85086197-85086216 | None:intergenic | 30.0% | |
| CTTCTGAGCATTAAAGAAAT+TGG | - | chr6_3:85086322-85086341 | None:intergenic | 30.0% | |
| ! | AATGCTCAGAAGAAATTTTC+TGG | + | chr6_3:85086330-85086349 | Msa0962180:CDS | 30.0% |
| CATATAGTAGGAAACATTTG+TGG | - | chr6_3:85086378-85086397 | None:intergenic | 30.0% | |
| TGTTTCCTACTATATGTCAT+AGG | + | chr6_3:85086382-85086401 | Msa0962180:CDS | 30.0% | |
| ! | TGTAGAACGAAAAGATTTTG+AGG | + | chr6_3:85086425-85086444 | Msa0962180:CDS | 30.0% |
| TATGAGTTCTTCCTCAAATT+TGG | + | chr6_3:85086461-85086480 | Msa0962180:CDS | 30.0% | |
| ATGAGTTCTTCCTCAAATTT+GGG | + | chr6_3:85086462-85086481 | Msa0962180:CDS | 30.0% | |
| CTATCTGGCAAAAATGAAAA+CGG | + | chr6_3:85086531-85086550 | Msa0962180:CDS | 30.0% | |
| ! | TTCCTTTTCACTTTAACAGT+TGG | - | chr6_3:85086573-85086592 | None:intergenic | 30.0% |
| AATAACACGCATTACCATAT+TGG | + | chr6_3:85086656-85086675 | Msa0962180:CDS | 30.0% | |
| ATAACACGCATTACCATATT+GGG | + | chr6_3:85086657-85086676 | Msa0962180:CDS | 30.0% | |
| AAATGCAATACAACCCAATA+TGG | - | chr6_3:85086673-85086692 | None:intergenic | 30.0% | |
| ATTTGCTTCTATGAAGTTGT+TGG | + | chr6_3:85086689-85086708 | Msa0962180:CDS | 30.0% | |
| TTTGCTTCTATGAAGTTGTT+GGG | + | chr6_3:85086690-85086709 | Msa0962180:CDS | 30.0% | |
| AACTTCCCCTAATATATGTA+GGG | - | chr6_3:85086812-85086831 | None:intergenic | 30.0% | |
| ! | TTATTATGCAGTTTTTACGC+CGG | + | chr6_3:85086856-85086875 | Msa0962180:CDS | 30.0% |
| GAAAGTTATGCACTATCATA+TGG | + | chr6_3:85087202-85087221 | Msa0962180:intron | 30.0% | |
| !!! | TGGCAGTTTGATTGTTATTT+TGG | + | chr6_3:85087349-85087368 | Msa0962180:intron | 30.0% |
| CATTGTAGCTAATAAACTTG+TGG | + | chr6_3:85087503-85087522 | Msa0962180:intron | 30.0% | |
| AATAGCGTGTTCAATCTAAT+TGG | + | chr6_3:85087537-85087556 | Msa0962180:intron | 30.0% | |
| !! | TTCCAAATGTTACTTTGTGT+GGG | - | chr6_3:85087583-85087602 | None:intergenic | 30.0% |
| !! | TTTCCAAATGTTACTTTGTG+TGG | - | chr6_3:85087584-85087603 | None:intergenic | 30.0% |
| CAATAGAAAAATCTTGTCAC+TGG | + | chr6_3:85087744-85087763 | Msa0962180:CDS | 30.0% | |
| AAAAGAACCCAAACTACTAT+AGG | + | chr6_3:85087891-85087910 | Msa0962180:CDS | 30.0% | |
| AAGTTAAGTATGTTGTGAAG+AGG | + | chr6_3:85088042-85088061 | Msa0962180:CDS | 30.0% | |
| !! | AATTTATTTTCTGGGAAGTG+GGG | + | chr6_3:85088177-85088196 | Msa0962180:three_prime_UTR | 30.0% |
| ! | ATTCAAAGCATTCTACGTAT+AGG | + | chr6_3:85088207-85088226 | Msa0962180:three_prime_UTR | 30.0% |
| TCAATCAATCAGTTCTTTAC+AGG | - | chr6_3:85088264-85088283 | None:intergenic | 30.0% | |
| ! | TTGCTAATCACGTAATTTTC+TGG | - | chr6_3:85088305-85088324 | None:intergenic | 30.0% |
| !! | ACAATTAGGGTTTTGACGAA+AGG | + | chr6_3:85081210-85081229 | Msa0962180:five_prime_UTR | 35.0% |
| !! | CAATTAGGGTTTTGACGAAA+GGG | + | chr6_3:85081211-85081230 | Msa0962180:five_prime_UTR | 35.0% |
| !! | AATTAGGGTTTTGACGAAAG+GGG | + | chr6_3:85081212-85081231 | Msa0962180:five_prime_UTR | 35.0% |
| !! | ACAGTGGATTTTCAACAATG+CGG | - | chr6_3:85081453-85081472 | None:intergenic | 35.0% |
| TGTTGCATGGAATTGAATGT+TGG | + | chr6_3:85082085-85082104 | Msa0962180:intron | 35.0% | |
| TTATGAAATTGGATGCTGGA+TGG | + | chr6_3:85082313-85082332 | Msa0962180:intron | 35.0% | |
| GTGGATAGGCTTATAATTAG+AGG | + | chr6_3:85082508-85082527 | Msa0962180:intron | 35.0% | |
| !! | GTGTCACTTGTAACTTTCTT+TGG | - | chr6_3:85082545-85082564 | None:intergenic | 35.0% |
| ! | TTTGGCTCGTTGAATATGAT+TGG | + | chr6_3:85082601-85082620 | Msa0962180:intron | 35.0% |
| CAGATTTATGCTAGACGATT+TGG | + | chr6_3:85082754-85082773 | Msa0962180:intron | 35.0% | |
| ! | TGGTTCATTTTGCAGCTTAT+TGG | + | chr6_3:85082774-85082793 | Msa0962180:intron | 35.0% |
| ! | GGTTCATTTTGCAGCTTATT+GGG | + | chr6_3:85082775-85082794 | Msa0962180:intron | 35.0% |
| ! | GTTCATTTTGCAGCTTATTG+GGG | + | chr6_3:85082776-85082795 | Msa0962180:intron | 35.0% |
| AAAAACGCAGAAATTGACGA+AGG | + | chr6_3:85082849-85082868 | Msa0962180:CDS | 35.0% | |
| AATTGACGAAGGTTACACAA+TGG | + | chr6_3:85082860-85082879 | Msa0962180:CDS | 35.0% | |
| ATTGACGAAGGTTACACAAT+GGG | + | chr6_3:85082861-85082880 | Msa0962180:CDS | 35.0% | |
| CTCATCTGATATTACTTTGC+AGG | + | chr6_3:85082992-85083011 | Msa0962180:intron | 35.0% | |
| AATACGAAGGGAAGATTTAG+GGG | - | chr6_3:85083090-85083109 | None:intergenic | 35.0% | |
| GAATACGAAGGGAAGATTTA+GGG | - | chr6_3:85083091-85083110 | None:intergenic | 35.0% | |
| TCTATTCCTTCTGTTCAGAT+TGG | + | chr6_3:85083251-85083270 | Msa0962180:intron | 35.0% | |
| AGACACCTATGATAAGGATA+GGG | - | chr6_3:85083440-85083459 | None:intergenic | 35.0% | |
| AAGACACCTATGATAAGGAT+AGG | - | chr6_3:85083441-85083460 | None:intergenic | 35.0% | |
| AAGTGTACAGTTGCGAAAAT+TGG | + | chr6_3:85083465-85083484 | Msa0962180:intron | 35.0% | |
| ! | GAGAAGAACAAAGTATCTCA+AGG | + | chr6_3:85083492-85083511 | Msa0962180:CDS | 35.0% |
| !!! | AGTGTCATTTTTGCAAGAGA+TGG | - | chr6_3:85083561-85083580 | None:intergenic | 35.0% |
| AAAAATGACACTCCTATCTC+AGG | + | chr6_3:85083569-85083588 | Msa0962180:CDS | 35.0% | |
| AAAAGTTTCACACCTGAGAT+AGG | - | chr6_3:85083584-85083603 | None:intergenic | 35.0% | |
| AAATTCACCCTCTCTCATAA+AGG | + | chr6_3:85083799-85083818 | Msa0962180:intron | 35.0% | |
| AATTCACCCTCTCTCATAAA+GGG | + | chr6_3:85083800-85083819 | Msa0962180:intron | 35.0% | |
| AGTTTACCCTTTATGAGAGA+GGG | - | chr6_3:85083809-85083828 | None:intergenic | 35.0% | |
| AAGTTTACCCTTTATGAGAG+AGG | - | chr6_3:85083810-85083829 | None:intergenic | 35.0% | |
| TCTCTCATAAAGGGTAAACT+TGG | + | chr6_3:85083809-85083828 | Msa0962180:intron | 35.0% | |
| CTCTTCATGATTTAGTCAAC+AGG | + | chr6_3:85083887-85083906 | Msa0962180:intron | 35.0% | |
| !! | TGTTTGGTGTTGAAATTGTG+AGG | - | chr6_3:85084031-85084050 | None:intergenic | 35.0% |
| TTGCTTGTTCTGTAGTTGTT+TGG | - | chr6_3:85084047-85084066 | None:intergenic | 35.0% | |
| AAGACAACACCTTGTTAGAA+AGG | + | chr6_3:85084065-85084084 | Msa0962180:intron | 35.0% | |
| !! | ACGGATGTAGTATTTTTACC+AGG | + | chr6_3:85084119-85084138 | Msa0962180:intron | 35.0% |
| TTCCTTGTAGTTGAAATGAG+AGG | - | chr6_3:85084168-85084187 | None:intergenic | 35.0% | |
| CTGAACATCTAACCTTATCA+TGG | + | chr6_3:85084390-85084409 | Msa0962180:intron | 35.0% | |
| TTCCAACCATAATTGCACAA+TGG | - | chr6_3:85084503-85084522 | None:intergenic | 35.0% | |
| AATGTGATAATACAAGAGGG+AGG | - | chr6_3:85084562-85084581 | None:intergenic | 35.0% | |
| ! | AACCCTGAGAATGCTTTTAA+TGG | + | chr6_3:85084608-85084627 | Msa0962180:intron | 35.0% |
| !! | CACCATTAAAAGCATTCTCA+GGG | - | chr6_3:85084613-85084632 | None:intergenic | 35.0% |
| !! | ACACCATTAAAAGCATTCTC+AGG | - | chr6_3:85084614-85084633 | None:intergenic | 35.0% |
| !!! | TCAACATTTTCAGGGGTATT+TGG | - | chr6_3:85084698-85084717 | None:intergenic | 35.0% |
| ! | TCTTCGTTCAACATTTTCAG+GGG | - | chr6_3:85084705-85084724 | None:intergenic | 35.0% |
| ! | GTCTTCGTTCAACATTTTCA+GGG | - | chr6_3:85084706-85084725 | None:intergenic | 35.0% |
| AGATAGTTGATCTTCTTCCT+TGG | + | chr6_3:85084846-85084865 | Msa0962180:CDS | 35.0% | |
| GATAGTTGATCTTCTTCCTT+GGG | + | chr6_3:85084847-85084866 | Msa0962180:CDS | 35.0% | |
| !! | TGCTTATAAGCTTTGAAGGA+AGG | - | chr6_3:85085032-85085051 | None:intergenic | 35.0% |
| ! | GAATGTTTGATAGCTTCAGA+GGG | + | chr6_3:85085193-85085212 | Msa0962180:CDS | 35.0% |
| !! | GCTTTTTGCCTATTTCTTCT+TGG | + | chr6_3:85085238-85085257 | Msa0962180:CDS | 35.0% |
| ATACCAGTCCAAGAAGAAAT+AGG | - | chr6_3:85085249-85085268 | None:intergenic | 35.0% | |
| ! | GCTGCTGTTATGAAGTATTT+AGG | + | chr6_3:85085299-85085318 | Msa0962180:intron | 35.0% |
| !! | GAATTGTTTGTTTTCACGGT+GGG | + | chr6_3:85085321-85085340 | Msa0962180:intron | 35.0% |
| !! | TAATGCTATGTTTGGTTTGG+CGG | - | chr6_3:85085441-85085460 | None:intergenic | 35.0% |
| GTCTAATGCTATGTTTGGTT+TGG | - | chr6_3:85085444-85085463 | None:intergenic | 35.0% | |
| ! | CCCAAAACTGAATTACGTTT+TGG | - | chr6_3:85085631-85085650 | None:intergenic | 35.0% |
| GACAAGAGAAATACCAATGA+TGG | - | chr6_3:85085685-85085704 | None:intergenic | 35.0% | |
| GACTAAAAAATGGGAGGAAA+TGG | - | chr6_3:85085810-85085829 | None:intergenic | 35.0% | |
| GGTCCTCAAGACTAAAAAAT+GGG | - | chr6_3:85085819-85085838 | None:intergenic | 35.0% | |
| TAGCACACAATGAGAACATA+GGG | - | chr6_3:85085851-85085870 | None:intergenic | 35.0% | |
| ATAGCACACAATGAGAACAT+AGG | - | chr6_3:85085852-85085871 | None:intergenic | 35.0% | |
| ! | TCTCATTGTGTGCTATTAAC+TGG | + | chr6_3:85085856-85085875 | Msa0962180:intron | 35.0% |
| ! | CTCATTGTGTGCTATTAACT+GGG | + | chr6_3:85085857-85085876 | Msa0962180:intron | 35.0% |
| ! | TCATTGTGTGCTATTAACTG+GGG | + | chr6_3:85085858-85085877 | Msa0962180:intron | 35.0% |
| AATCTTAGCATATGGCGTTT+AGG | - | chr6_3:85085948-85085967 | None:intergenic | 35.0% | |
| ATAGTTGATCTTACCAAAGC+TGG | - | chr6_3:85086235-85086254 | None:intergenic | 35.0% | |
| TCTGGAAGCAAGAATTCTAA+AGG | + | chr6_3:85086348-85086367 | Msa0962180:CDS | 35.0% | |
| TGAGTTCTTCCTCAAATTTG+GGG | + | chr6_3:85086463-85086482 | Msa0962180:CDS | 35.0% | |
| AGCCAACTGTTAAAGTGAAA+AGG | + | chr6_3:85086568-85086587 | Msa0962180:CDS | 35.0% | |
| TGTAGGCCCTACATATATTA+GGG | + | chr6_3:85086803-85086822 | Msa0962180:CDS | 35.0% | |
| GAACTTCCCCTAATATATGT+AGG | - | chr6_3:85086813-85086832 | None:intergenic | 35.0% | |
| TATATTAGGGGAAGTTCTGT+TGG | + | chr6_3:85086816-85086835 | Msa0962180:CDS | 35.0% | |
| CCTCCTATACACATTAATAG+GGG | - | chr6_3:85086934-85086953 | None:intergenic | 35.0% | |
| GCCTCCTATACACATTAATA+GGG | - | chr6_3:85086935-85086954 | None:intergenic | 35.0% | |
| AGCCTCCTATACACATTAAT+AGG | - | chr6_3:85086936-85086955 | None:intergenic | 35.0% | |
| TGTTTGCCATTCCCTAATAA+GGG | - | chr6_3:85086982-85087001 | None:intergenic | 35.0% | |
| TTGTTTGCCATTCCCTAATA+AGG | - | chr6_3:85086983-85087002 | None:intergenic | 35.0% | |
| TATATGCAAGTCCGTTTCAT+TGG | + | chr6_3:85087329-85087348 | Msa0962180:intron | 35.0% | |
| CAATCAAACTGCCAATGAAA+CGG | - | chr6_3:85087343-85087362 | None:intergenic | 35.0% | |
| GCTAATAAACTTGTGGATAG+AGG | + | chr6_3:85087510-85087529 | Msa0962180:intron | 35.0% | |
| GACATTCTATCAGATGGAAA+TGG | + | chr6_3:85087803-85087822 | Msa0962180:CDS | 35.0% | |
| CGTCTTACCTATAGTAGTTT+GGG | - | chr6_3:85087901-85087920 | None:intergenic | 35.0% | |
| TCGTCTTACCTATAGTAGTT+TGG | - | chr6_3:85087902-85087921 | None:intergenic | 35.0% | |
| TCTCTTGCTTAACTAACAAC+TGG | + | chr6_3:85087925-85087944 | Msa0962180:intron | 35.0% | |
| ATGATATATACACACACACC+AGG | + | chr6_3:85088112-85088131 | Msa0962180:exon | 35.0% | |
| TTCACATGGCGAAATTGGTT+CGG | + | chr6_3:85081327-85081346 | Msa0962180:CDS | 40.0% | |
| !!! | GAAATTGGTTCGGGATTTTG+TGG | + | chr6_3:85081337-85081356 | Msa0962180:CDS | 40.0% |
| !! | TGTGGTTCTGTGTTTTGTGT+TGG | + | chr6_3:85081355-85081374 | Msa0962180:CDS | 40.0% |
| !! | GTGGTTCTGTGTTTTGTGTT+GGG | + | chr6_3:85081356-85081375 | Msa0962180:CDS | 40.0% |
| GAACGGAGGAAGTTGAAATT+TGG | + | chr6_3:85081409-85081428 | Msa0962180:CDS | 40.0% | |
| AAATCCACTGTTGAAAGCGA+CGG | + | chr6_3:85081462-85081481 | Msa0962180:CDS | 40.0% | |
| AATTCCGGTTTCGTGTTATC+AGG | + | chr6_3:85081489-85081508 | Msa0962180:CDS | 40.0% | |
| ATCACCTGATAACACGAAAC+CGG | - | chr6_3:85081496-85081515 | None:intergenic | 40.0% | |
| TGAATGTTTGGGAGTGATGA+CGG | + | chr6_3:85081655-85081674 | Msa0962180:intron | 40.0% | |
| ! | ACGTCTTCAATCTGAAGTGT+TGG | + | chr6_3:85081826-85081845 | Msa0962180:intron | 40.0% |
| TTAAACACTCGTGTTAGCGT+TGG | + | chr6_3:85081918-85081937 | Msa0962180:intron | 40.0% | |
| GCATGGAATTGAATGTTGGA+AGG | + | chr6_3:85082089-85082108 | Msa0962180:intron | 40.0% | |
| TTCCCATGTTATGAAGGAGT+TGG | + | chr6_3:85082684-85082703 | Msa0962180:intron | 40.0% | |
| CACCAACTCCTTCATAACAT+GGG | - | chr6_3:85082689-85082708 | None:intergenic | 40.0% | |
| ACACCAACTCCTTCATAACA+TGG | - | chr6_3:85082690-85082709 | None:intergenic | 40.0% | |
| TACTTTGCAGGATCTTCTGA+TGG | + | chr6_3:85083004-85083023 | Msa0962180:intron | 40.0% | |
| ! | AGGATCTTCTGATGGATGTT+AGG | + | chr6_3:85083012-85083031 | Msa0962180:intron | 40.0% |
| ! | GGATCTTCTGATGGATGTTA+GGG | + | chr6_3:85083013-85083032 | Msa0962180:intron | 40.0% |
| ! | TTCAGGTTACCAGCATATTC+CGG | - | chr6_3:85083056-85083075 | None:intergenic | 40.0% |
| ATACGAAGGGAAGATTTAGG+GGG | - | chr6_3:85083089-85083108 | None:intergenic | 40.0% | |
| GGAATACGAAGGGAAGATTT+AGG | - | chr6_3:85083092-85083111 | None:intergenic | 40.0% | |
| AATCTTCCCTTCGTATTCCT+TGG | + | chr6_3:85083093-85083112 | Msa0962180:CDS | 40.0% | |
| GATTCTCCAATCTGAACAGA+AGG | - | chr6_3:85083260-85083279 | None:intergenic | 40.0% | |
| ACTAGCTGAGGTAAGACATA+TGG | + | chr6_3:85083364-85083383 | Msa0962180:intron | 40.0% | |
| TAAGACATATGGACAGAGGT+TGG | + | chr6_3:85083375-85083394 | Msa0962180:intron | 40.0% | |
| TCGAGAGGATCCTATGTTTA+GGG | - | chr6_3:85083656-85083675 | None:intergenic | 40.0% | |
| ACCTTGTTAGAAAGGTCAAC+AGG | + | chr6_3:85084073-85084092 | Msa0962180:intron | 40.0% | |
| CCTTGTTAGAAAGGTCAACA+GGG | + | chr6_3:85084074-85084093 | Msa0962180:intron | 40.0% | |
| CTTGTAGTTGAAATGAGAGG+TGG | - | chr6_3:85084165-85084184 | None:intergenic | 40.0% | |
| CACCTCTCATTTCAACTACA+AGG | + | chr6_3:85084163-85084182 | Msa0962180:intron | 40.0% | |
| GAACATTGGGAATTTCCATG+AGG | + | chr6_3:85084252-85084271 | Msa0962180:intron | 40.0% | |
| CACATTATTCCTAGACCTCA+TGG | - | chr6_3:85084270-85084289 | None:intergenic | 40.0% | |
| CATGAGGTCTAGGAATAATG+TGG | + | chr6_3:85084268-85084287 | Msa0962180:intron | 40.0% | |
| GTATACGGTGTTCCATGATA+AGG | - | chr6_3:85084405-85084424 | None:intergenic | 40.0% | |
| TGCCATTGTGCAATTATGGT+TGG | + | chr6_3:85084498-85084517 | Msa0962180:intron | 40.0% | |
| ! | CGTCTTCGTTCAACATTTTC+AGG | - | chr6_3:85084707-85084726 | None:intergenic | 40.0% |
| GAAAATGTTGAACGAAGACG+AGG | + | chr6_3:85084707-85084726 | Msa0962180:CDS | 40.0% | |
| TTTACGCGAATTGCTTAGAC+AGG | + | chr6_3:85084742-85084761 | Msa0962180:CDS | 40.0% | |
| TTACGCGAATTGCTTAGACA+GGG | + | chr6_3:85084743-85084762 | Msa0962180:CDS | 40.0% | |
| AATGCCTGGCTTAGAAAAGA+AGG | - | chr6_3:85084806-85084825 | None:intergenic | 40.0% | |
| CCAGTAAATTGTGAAATGCC+TGG | - | chr6_3:85084820-85084839 | None:intergenic | 40.0% | |
| CCAGGCATTTCACAATTTAC+TGG | + | chr6_3:85084817-85084836 | Msa0962180:CDS | 40.0% | |
| TTTACAGCTCATATGGCACT+TGG | + | chr6_3:85084959-85084978 | Msa0962180:CDS | 40.0% | |
| TTCCAGCAAGCAAAAAGAGT+TGG | + | chr6_3:85084985-85085004 | Msa0962180:CDS | 40.0% | |
| ! | TACCAACTCTTTTTGCTTGC+TGG | - | chr6_3:85084990-85085009 | None:intergenic | 40.0% |
| ! | CGAATGTTTGATAGCTTCAG+AGG | + | chr6_3:85085192-85085211 | Msa0962180:CDS | 40.0% |
| ! | TTGCCTATTTCTTCTTGGAC+TGG | + | chr6_3:85085243-85085262 | Msa0962180:CDS | 40.0% |
| !! | GGAATTGTTTGTTTTCACGG+TGG | + | chr6_3:85085320-85085339 | Msa0962180:intron | 40.0% |
| TGCATTGGAACGCTAAAAAG+TGG | + | chr6_3:85085409-85085428 | Msa0962180:intron | 40.0% | |
| TGTAGAATCTCGCAGAAAAC+TGG | - | chr6_3:85085522-85085541 | None:intergenic | 40.0% | |
| !!! | ACGTAATTCAGTTTTGGGGA+AGG | + | chr6_3:85085633-85085652 | Msa0962180:CDS | 40.0% |
| !!! | AGTTTTGGGGAAGGCAATAA+TGG | + | chr6_3:85085642-85085661 | Msa0962180:CDS | 40.0% |
| TTCAGCTGTAAACCCATCAT+TGG | + | chr6_3:85085669-85085688 | Msa0962180:CDS | 40.0% | |
| !!! | TTTTGTTTTCCTTCAGGACG+TGG | + | chr6_3:85085728-85085747 | Msa0962180:intron | 40.0% |
| !! | TTTGTTTTCCTTCAGGACGT+GGG | + | chr6_3:85085729-85085748 | Msa0962180:intron | 40.0% |
| CCTCAAGACTAAAAAATGGG+AGG | - | chr6_3:85085816-85085835 | None:intergenic | 40.0% | |
| !!! | CCTCCCATTTTTTAGTCTTG+AGG | + | chr6_3:85085813-85085832 | Msa0962180:intron | 40.0% |
| GGGTCCTCAAGACTAAAAAA+TGG | - | chr6_3:85085820-85085839 | None:intergenic | 40.0% | |
| !!! | GTTTTTTGCTGAACTTTGGC+AGG | + | chr6_3:85086153-85086172 | Msa0962180:intron | 40.0% |
| GGAGAACAACCTTTAGTATC+TGG | - | chr6_3:85086214-85086233 | None:intergenic | 40.0% | |
| TAAAGGTTGTTCTCCAGCTT+TGG | + | chr6_3:85086219-85086238 | Msa0962180:CDS | 40.0% | |
| TTACAGATGTTCATCTCTGC+AGG | + | chr6_3:85086296-85086315 | Msa0962180:intron | 40.0% | |
| AGAGGCCTATGACATATAGT+AGG | - | chr6_3:85086390-85086409 | None:intergenic | 40.0% | |
| GAAGAACTCATATATGAGCG+AGG | - | chr6_3:85086453-85086472 | None:intergenic | 40.0% | |
| !! | CTAACTCCTACTGATTTGCA+GGG | + | chr6_3:85086501-85086520 | Msa0962180:CDS | 40.0% |
| AACCTTAGCACTCATCACAA+TGG | + | chr6_3:85086591-85086610 | Msa0962180:CDS | 40.0% | |
| TTCCATTGTGATGAGTGCTA+AGG | - | chr6_3:85086596-85086615 | None:intergenic | 40.0% | |
| GCACTCATCACAATGGAATT+TGG | + | chr6_3:85086598-85086617 | Msa0962180:CDS | 40.0% | |
| AAGTTGTTGGGAATGAACCT+GGG | + | chr6_3:85086702-85086721 | Msa0962180:CDS | 40.0% | |
| ! | AGTCCAAGAAGTACAAGTGT+GGG | - | chr6_3:85086760-85086779 | None:intergenic | 40.0% |
| TCATCTGCTAACTACACTGT+AGG | + | chr6_3:85086786-85086805 | Msa0962180:CDS | 40.0% | |
| CTGTAGGCCCTACATATATT+AGG | + | chr6_3:85086802-85086821 | Msa0962180:CDS | 40.0% | |
| GTAGGCCCTACATATATTAG+GGG | + | chr6_3:85086804-85086823 | Msa0962180:CDS | 40.0% | |
| TTCTGTTGGCAACAAACTGA+AGG | + | chr6_3:85086830-85086849 | Msa0962180:CDS | 40.0% | |
| TCTGTTGGCAACAAACTGAA+GGG | + | chr6_3:85086831-85086850 | Msa0962180:CDS | 40.0% | |
| ATTAATAGGGGAGGATGATG+AGG | - | chr6_3:85086922-85086941 | None:intergenic | 40.0% | |
| CCTATACACATTAATAGGGG+AGG | - | chr6_3:85086931-85086950 | None:intergenic | 40.0% | |
| CCTCCCCTATTAATGTGTAT+AGG | + | chr6_3:85086928-85086947 | Msa0962180:CDS | 40.0% | |
| CCCCTATTAATGTGTATAGG+AGG | + | chr6_3:85086931-85086950 | Msa0962180:CDS | 40.0% | |
| AAGAAGCGGAAACCCTTATT+AGG | + | chr6_3:85086967-85086986 | Msa0962180:CDS | 40.0% | |
| AGAAGCGGAAACCCTTATTA+GGG | + | chr6_3:85086968-85086987 | Msa0962180:CDS | 40.0% | |
| AACAATCAAAGCTGAAGCTC+TGG | + | chr6_3:85086998-85087017 | Msa0962180:CDS | 40.0% | |
| ACAATCAAAGCTGAAGCTCT+GGG | + | chr6_3:85086999-85087018 | Msa0962180:CDS | 40.0% | |
| CAGTTAGGCCATTTACTTCA+TGG | - | chr6_3:85087031-85087050 | None:intergenic | 40.0% | |
| ATTCGTCAAGGACTTCAGTT+AGG | - | chr6_3:85087046-85087065 | None:intergenic | 40.0% | |
| AGCGTGTTCAATCTAATTGG+AGG | + | chr6_3:85087540-85087559 | Msa0962180:intron | 40.0% | |
| GCGTGTTCAATCTAATTGGA+GGG | + | chr6_3:85087541-85087560 | Msa0962180:intron | 40.0% | |
| CTCCCACACAAAGTAACATT+TGG | + | chr6_3:85087578-85087597 | Msa0962180:intron | 40.0% | |
| ! | CATGTTGACTATGCATCACA+TGG | + | chr6_3:85087664-85087683 | Msa0962180:intron | 40.0% |
| CTGATAGAATGTCAGCTCTA+AGG | - | chr6_3:85087796-85087815 | None:intergenic | 40.0% | |
| AGAGCTGACATTCTATCAGA+TGG | + | chr6_3:85087797-85087816 | Msa0962180:CDS | 40.0% | |
| ! | AGAGATAGAAGCCCTTTTAG+AGG | + | chr6_3:85087838-85087857 | Msa0962180:CDS | 40.0% |
| ! | TTCAGCTGCTTCCTCTAAAA+GGG | - | chr6_3:85087852-85087871 | None:intergenic | 40.0% |
| AACTGAAGTTGAGGCTAACT+TGG | + | chr6_3:85088143-85088162 | Msa0962180:three_prime_UTR | 40.0% | |
| ! | CGGAGTGTCAAATACACAAT+GGG | - | chr6_3:85088435-85088454 | None:intergenic | 40.0% |
| CTAGCTAATGCTGCAGTGAT+CGG | + | chr6_3:85081256-85081275 | Msa0962180:CDS | 45.0% | |
| TCTCCGTTTCCAGTTTCACA+TGG | + | chr6_3:85081313-85081332 | Msa0962180:CDS | 45.0% | |
| TCGCCATGTGAAACTGGAAA+CGG | - | chr6_3:85081319-85081338 | None:intergenic | 45.0% | |
| CCAATTTCGCCATGTGAAAC+TGG | - | chr6_3:85081325-85081344 | None:intergenic | 45.0% | |
| CCAGTTTCACATGGCGAAAT+TGG | + | chr6_3:85081322-85081341 | Msa0962180:CDS | 45.0% | |
| ! | TCACATGGCGAAATTGGTTC+GGG | + | chr6_3:85081328-85081347 | Msa0962180:CDS | 45.0% |
| !! | AACATCACTTTTCCCAGCGT+AGG | - | chr6_3:85081383-85081402 | None:intergenic | 45.0% |
| GTGATGTTGTTCTTGAACGG+AGG | + | chr6_3:85081395-85081414 | Msa0962180:CDS | 45.0% | |
| GAAAGCGACGGTTGAAATTC+CGG | + | chr6_3:85081474-85081493 | Msa0962180:CDS | 45.0% | |
| !! | TCGGTGTCAGACATTGACAT+GGG | + | chr6_3:85081789-85081808 | Msa0962180:intron | 45.0% |
| CACTGACACATGTTGGATAC+CGG | + | chr6_3:85081942-85081961 | Msa0962180:intron | 45.0% | |
| !! | CTGAAGTGTTGGTGCTACAT+AGG | + | chr6_3:85082208-85082227 | Msa0962180:intron | 45.0% |
| !! | CTCGTCGACTTCTAATCTAC+AGG | - | chr6_3:85082482-85082501 | None:intergenic | 45.0% |
| CTGTAGATTAGAAGTCGACG+AGG | + | chr6_3:85082480-85082499 | Msa0962180:intron | 45.0% | |
| TTGGTTGTGCCATCTATACC+TGG | - | chr6_3:85082902-85082921 | None:intergenic | 45.0% | |
| !! | GGATAAGCTCCTTTTTGAGC+CGG | + | chr6_3:85083034-85083053 | Msa0962180:CDS | 45.0% |
| CAGCATATTCCGGCTCAAAA+AGG | - | chr6_3:85083046-85083065 | None:intergenic | 45.0% | |
| !! | CTTTTTGAGCCGGAATATGC+TGG | + | chr6_3:85083044-85083063 | Msa0962180:CDS | 45.0% |
| GGAATATGCTGGTAACCTGA+AGG | + | chr6_3:85083055-85083074 | Msa0962180:CDS | 45.0% | |
| ATGCTGGTAACCTGAAGGAA+AGG | + | chr6_3:85083060-85083079 | Msa0962180:CDS | 45.0% | |
| CCAAGACCAAGGAATACGAA+GGG | - | chr6_3:85083102-85083121 | None:intergenic | 45.0% | |
| ACCAAGACCAAGGAATACGA+AGG | - | chr6_3:85083103-85083122 | None:intergenic | 45.0% | |
| ! | TTGAAGAAGGCATAGAGCAC+CGG | - | chr6_3:85083129-85083148 | None:intergenic | 45.0% |
| TGCTCTATGCCTTCTTCAAG+AGG | + | chr6_3:85083130-85083149 | Msa0962180:CDS | 45.0% | |
| CCAAGTGTACCTCTTGAAGA+AGG | - | chr6_3:85083142-85083161 | None:intergenic | 45.0% | |
| ! | CCTTCTTCAAGAGGTACACT+TGG | + | chr6_3:85083139-85083158 | Msa0962180:intron | 45.0% |
| AGGTACACTTGGCATGTACT+TGG | + | chr6_3:85083150-85083169 | Msa0962180:intron | 45.0% | |
| TGGAGAATCAAAGCTTGTGC+TGG | + | chr6_3:85083271-85083290 | Msa0962180:CDS | 45.0% | |
| TCAAAGCTTGTGCTGGACAT+TGG | + | chr6_3:85083278-85083297 | Msa0962180:CDS | 45.0% | |
| TCTTTCTATGGCACTAGCTG+AGG | + | chr6_3:85083352-85083371 | Msa0962180:CDS | 45.0% | |
| GAGGTAAGACATATGGACAG+AGG | + | chr6_3:85083371-85083390 | Msa0962180:intron | 45.0% | |
| CTACCTCTGACCCTAAACAT+AGG | + | chr6_3:85083643-85083662 | Msa0962180:intron | 45.0% | |
| ! | GATCCTATGTTTAGGGTCAG+AGG | - | chr6_3:85083649-85083668 | None:intergenic | 45.0% |
| CTCGAGAGGATCCTATGTTT+AGG | - | chr6_3:85083657-85083676 | None:intergenic | 45.0% | |
| CTCAGCATTGCTTGTGCTTT+GGG | - | chr6_3:85083966-85083985 | None:intergenic | 45.0% | |
| TCTCAGCATTGCTTGTGCTT+TGG | - | chr6_3:85083967-85083986 | None:intergenic | 45.0% | |
| CCCTGTTGACCTTTCTAACA+AGG | - | chr6_3:85084077-85084096 | None:intergenic | 45.0% | |
| TGGGAATTTCCATGAGGTCT+AGG | + | chr6_3:85084258-85084277 | Msa0962180:intron | 45.0% | |
| GTGATAATACAAGAGGGAGG+AGG | - | chr6_3:85084559-85084578 | None:intergenic | 45.0% | |
| TGAAGCTTCATGCCAAGTAC+AGG | + | chr6_3:85084775-85084794 | Msa0962180:CDS | 45.0% | |
| ATCACAGCTAAGCTATCCCA+AGG | - | chr6_3:85084866-85084885 | None:intergenic | 45.0% | |
| CTCGCAGAAAACTGGAAAGT+TGG | - | chr6_3:85085514-85085533 | None:intergenic | 45.0% | |
| ! | ATCTTCAATCTAGGGCACAG+AGG | + | chr6_3:85085561-85085580 | Msa0962180:intron | 45.0% |
| ATTTACAACCCACGTCCTGA+AGG | - | chr6_3:85085740-85085759 | None:intergenic | 45.0% | |
| !! | TTTAGTCTTGAGGACCCTAG+CGG | + | chr6_3:85085823-85085842 | Msa0962180:intron | 45.0% |
| ACAGAACCAGATGAGGATAG+AGG | - | chr6_3:85086408-85086427 | None:intergenic | 45.0% | |
| TCGTTCTACAGAACCAGATG+AGG | - | chr6_3:85086415-85086434 | None:intergenic | 45.0% | |
| GACAGCAAACCCCAAATTTG+AGG | - | chr6_3:85086475-85086494 | None:intergenic | 45.0% | |
| !! | GCTAACTCCTACTGATTTGC+AGG | + | chr6_3:85086500-85086519 | Msa0962180:CDS | 45.0% |
| AGTGAACCCTGCAAATCAGT+AGG | - | chr6_3:85086510-85086529 | None:intergenic | 45.0% | |
| GAAGTTGTTGGGAATGAACC+TGG | + | chr6_3:85086701-85086720 | Msa0962180:CDS | 45.0% | |
| AAGCCCACACTTGTACTTCT+TGG | + | chr6_3:85086754-85086773 | Msa0962180:CDS | 45.0% | |
| ! | CAGTCCAAGAAGTACAAGTG+TGG | - | chr6_3:85086761-85086780 | None:intergenic | 45.0% |
| !! | GATGATGAGGTAAGAGTGCT+GGG | - | chr6_3:85086909-85086928 | None:intergenic | 45.0% |
| CGGAAACCCTTATTAGGGAA+TGG | + | chr6_3:85086973-85086992 | Msa0962180:CDS | 45.0% | |
| CAATCAAAGCTGAAGCTCTG+GGG | + | chr6_3:85087000-85087019 | Msa0962180:CDS | 45.0% | |
| AGGCCATTTACTTCATGGCT+AGG | - | chr6_3:85087026-85087045 | None:intergenic | 45.0% | |
| GAGCAAGCATAGATTCGTCA+AGG | - | chr6_3:85087058-85087077 | None:intergenic | 45.0% | |
| TGACGAATCTATGCTTGCTC+AGG | + | chr6_3:85087058-85087077 | Msa0962180:CDS | 45.0% | |
| ! | GAAACGGACTTGCATATAGC+TGG | - | chr6_3:85087327-85087346 | None:intergenic | 45.0% |
| TCTTTGACAGTGGCAAGCTT+TGG | + | chr6_3:85087712-85087731 | Msa0962180:intron | 45.0% | |
| GTTCAGCTGCTTCCTCTAAA+AGG | - | chr6_3:85087853-85087872 | None:intergenic | 45.0% | |
| GTTGTGAAGAGGCAAGATGA+TGG | + | chr6_3:85088053-85088072 | Msa0962180:CDS | 45.0% | |
| !! | AGAGGCAAGATGATGGATCA+TGG | + | chr6_3:85088060-85088079 | Msa0962180:CDS | 45.0% |
| AACTTCAGTTATCCTGGACC+TGG | - | chr6_3:85088133-85088152 | None:intergenic | 45.0% | |
| GTCCAGGATAACTGAAGTTG+AGG | + | chr6_3:85088134-85088153 | Msa0962180:three_prime_UTR | 45.0% | |
| AGCCTCAACTTCAGTTATCC+TGG | - | chr6_3:85088139-85088158 | None:intergenic | 45.0% | |
| ! | CCGGAGTGTCAAATACACAA+TGG | - | chr6_3:85088436-85088455 | None:intergenic | 45.0% |
| !! | TAATAATAATTTAAGAAAAT+AGG | + | chr6_3:85081742-85081761 | Msa0962180:intron | 5.0% |
| !! | AAATTAAATTTATTAACAAT+TGG | - | chr6_3:85083845-85083864 | None:intergenic | 5.0% |
| !! | ATAAAATTTATAAAAACAAT+AGG | - | chr6_3:85085145-85085164 | None:intergenic | 5.0% |
| CGAGCAACGCTATACAGAGA+AGG | - | chr6_3:85081283-85081302 | None:intergenic | 50.0% | |
| ! | TTTTGTGTTGGGTCCTACGC+TGG | + | chr6_3:85081367-85081386 | Msa0962180:CDS | 50.0% |
| TTTGTGTTGGGTCCTACGCT+GGG | + | chr6_3:85081368-85081387 | Msa0962180:CDS | 50.0% | |
| ! | TCAACCGTCGCTTTCAACAG+TGG | - | chr6_3:85081469-85081488 | None:intergenic | 50.0% |
| !! | GTCGGTGTCAGACATTGACA+TGG | + | chr6_3:85081788-85081807 | Msa0962180:intron | 50.0% |
| CGTTGGACACTGACACATGT+TGG | + | chr6_3:85081935-85081954 | Msa0962180:intron | 50.0% | |
| ACGATGAGATTGTCAGCGTC+AGG | + | chr6_3:85082148-85082167 | Msa0962180:intron | 50.0% | |
| ! | TCATCTTTCTCGGCTCGATC+AGG | - | chr6_3:85082804-85082823 | None:intergenic | 50.0% |
| TGCATCTCGCCAGGTATAGA+TGG | + | chr6_3:85082890-85082909 | Msa0962180:intron | 50.0% | |
| TAGGGGGAATCCTTTCCTTC+AGG | - | chr6_3:85083073-85083092 | None:intergenic | 50.0% | |
| CCCTTCGTATTCCTTGGTCT+TGG | + | chr6_3:85083099-85083118 | Msa0962180:CDS | 50.0% | |
| !! | ATTCCTTGGTCTTGGTTGCC+CGG | + | chr6_3:85083107-85083126 | Msa0962180:CDS | 50.0% |
| ! | TGAAGAAGGCATAGAGCACC+GGG | - | chr6_3:85083128-85083147 | None:intergenic | 50.0% |
| ACGAAGACGAGGAGCAATTG+CGG | + | chr6_3:85084718-85084737 | Msa0962180:CDS | 50.0% | |
| CTTCATGCCAAGTACAGGAC+TGG | + | chr6_3:85084780-85084799 | Msa0962180:CDS | 50.0% | |
| AAGAAGGCCAGTCCTGTACT+TGG | - | chr6_3:85084790-85084809 | None:intergenic | 50.0% | |
| !! | CTGGCCTTCTTTTCTAAGCC+AGG | + | chr6_3:85084799-85084818 | Msa0962180:CDS | 50.0% |
| TGAACAAACGCACGGTGAAG+AGG | - | chr6_3:85085350-85085369 | None:intergenic | 50.0% | |
| TGGAGTGGTGAACAAACGCA+CGG | - | chr6_3:85085358-85085377 | None:intergenic | 50.0% | |
| !! | GCTATGTTTGGTTTGGCGGT+GGG | - | chr6_3:85085437-85085456 | None:intergenic | 50.0% |
| !! | TGCTATGTTTGGTTTGGCGG+TGG | - | chr6_3:85085438-85085457 | None:intergenic | 50.0% |
| ! | AATCTAGGGCACAGAGGAAG+AGG | + | chr6_3:85085567-85085586 | Msa0962180:intron | 50.0% |
| GGGAGGAAATGGCATCACTA+AGG | - | chr6_3:85085799-85085818 | None:intergenic | 50.0% | |
| GAGAACATAGGGAACCGCTA+GGG | - | chr6_3:85085840-85085859 | None:intergenic | 50.0% | |
| TGAGAACATAGGGAACCGCT+AGG | - | chr6_3:85085841-85085860 | None:intergenic | 50.0% | |
| ! | GTGTGCTATTAACTGGGGCA+TGG | + | chr6_3:85085863-85085882 | Msa0962180:intron | 50.0% |
| CTGAACTTTGGCAGGAACTG+TGG | + | chr6_3:85086161-85086180 | Msa0962180:intron | 50.0% | |
| CATAGGCCTCTATCCTCATC+TGG | + | chr6_3:85086399-85086418 | Msa0962180:CDS | 50.0% | |
| TTGCAGGGTTCACTGCTATC+TGG | + | chr6_3:85086516-85086535 | Msa0962180:CDS | 50.0% | |
| GGAATGAACCTGGGCAAGAA+TGG | + | chr6_3:85086711-85086730 | Msa0962180:CDS | 50.0% | |
| AGTTCGAACCATTCTTGCCC+AGG | - | chr6_3:85086722-85086741 | None:intergenic | 50.0% | |
| GGGCAAGAATGGTTCGAACT+TGG | + | chr6_3:85086722-85086741 | Msa0962180:CDS | 50.0% | |
| ! | GGATGATGAGGTAAGAGTGC+TGG | - | chr6_3:85086910-85086929 | None:intergenic | 50.0% |
| GGGCCTAGCCATGAAGTAAA+TGG | + | chr6_3:85087020-85087039 | Msa0962180:CDS | 50.0% | |
| TATACACACACACCAGGTCC+AGG | + | chr6_3:85088118-85088137 | Msa0962180:three_prime_UTR | 50.0% | |
| GGGGAATGAGAGTTCGCTCA+TGG | + | chr6_3:85081231-85081250 | Msa0962180:exon | 55.0% | |
| TAGCTCCAAGGTGCAAGCAG+GGG | - | chr6_3:85084666-85084685 | None:intergenic | 55.0% | |
| GTAGCTCCAAGGTGCAAGCA+GGG | - | chr6_3:85084667-85084686 | None:intergenic | 55.0% | |
| AGTAGCTCCAAGGTGCAAGC+AGG | - | chr6_3:85084668-85084687 | None:intergenic | 55.0% | |
| TTGGCAGGAACTGTGGCTGA+AGG | + | chr6_3:85086168-85086187 | Msa0962180:intron | 55.0% | |
| ! | TTTTTACGCCGGCCAGATGC+TGG | + | chr6_3:85086867-85086886 | Msa0962180:CDS | 55.0% |
| !! | GAGTGCTGGGTAAACCACCT+CGG | - | chr6_3:85086896-85086915 | None:intergenic | 55.0% |
| GTATAGGAGGCTGATGCCTG+TGG | + | chr6_3:85086944-85086963 | Msa0962180:CDS | 55.0% | |
| GCTGATGCCTGTGGAAGAAG+CGG | + | chr6_3:85086953-85086972 | Msa0962180:CDS | 55.0% | |
| AGGGTTTCCGCTTCTTCCAC+AGG | - | chr6_3:85086963-85086982 | None:intergenic | 55.0% | |
| AGAAGTCGACGAGGAGAGCG+TGG | + | chr6_3:85082489-85082508 | Msa0962180:intron | 60.0% | |
| ! | TCGACGAGGAGAGCGTGGAT+AGG | + | chr6_3:85082494-85082513 | Msa0962180:intron | 60.0% |
| TGGCACGCTCAGTAGCTCCA+AGG | - | chr6_3:85084678-85084697 | None:intergenic | 60.0% | |
| ! | GGGCGTTGTTGCATCTCGCC+AGG | + | chr6_3:85082881-85082900 | Msa0962180:CDS | 65.0% |
| GCACCGGGCAACCAAGACCA+AGG | - | chr6_3:85083113-85083132 | None:intergenic | 65.0% | |
| GCTTGCCCCTGCTTGCACCT+TGG | + | chr6_3:85084658-85084677 | Msa0962180:CDS | 65.0% | |
| CTCGGCTTCCAGCATCTGGC+CGG | - | chr6_3:85086878-85086897 | None:intergenic | 65.0% | |
| CCACCTCGGCTTCCAGCATC+TGG | - | chr6_3:85086882-85086901 | None:intergenic | 65.0% | |
| CCAGATGCTGGAAGCCGAGG+TGG | + | chr6_3:85086879-85086898 | Msa0962180:CDS | 65.0% | |
| CGGCCAGATGCTGGAAGCCG+AGG | + | chr6_3:85086876-85086895 | Msa0962180:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 85081056 | 85088455 | 85081056 | ID=Msa0962180;Name=Msa0962180 |
| chr6_3 | mRNA | 85081056 | 85088455 | 85081056 | ID=Msa0962180-mRNA-1;Parent=Msa0962180;Name=Msa0962180-mRNA-1;_AED=0.08;_eAED=0.08;_QI=194|1|1|1|1|1|12|340|807 |
| chr6_3 | exon | 85081056 | 85081510 | 85081056 | ID=Msa0962180-mRNA-1:exon:15249;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85082789 | 85082902 | 85082789 | ID=Msa0962180-mRNA-1:exon:15250;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85083014 | 85083151 | 85083014 | ID=Msa0962180-mRNA-1:exon:15251;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85083269 | 85083373 | 85083269 | ID=Msa0962180-mRNA-1:exon:15252;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85083468 | 85083590 | 85083468 | ID=Msa0962180-mRNA-1:exon:15253;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85084638 | 85085006 | 85084638 | ID=Msa0962180-mRNA-1:exon:15254;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85085169 | 85085264 | 85085169 | ID=Msa0962180-mRNA-1:exon:15255;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85085574 | 85085690 | 85085574 | ID=Msa0962180-mRNA-1:exon:15256;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85086175 | 85086240 | 85086175 | ID=Msa0962180-mRNA-1:exon:15257;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85086318 | 85087079 | 85086318 | ID=Msa0962180-mRNA-1:exon:15258;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85087722 | 85087912 | 85087722 | ID=Msa0962180-mRNA-1:exon:15259;Parent=Msa0962180-mRNA-1 |
| chr6_3 | exon | 85088034 | 85088455 | 85088034 | ID=Msa0962180-mRNA-1:exon:15260;Parent=Msa0962180-mRNA-1 |
| chr6_3 | five_prime_UTR | 85081056 | 85081249 | 85081056 | ID=Msa0962180-mRNA-1:five_prime_utr;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85081250 | 85081510 | 85081250 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85082789 | 85082902 | 85082789 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85083014 | 85083151 | 85083014 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85083269 | 85083373 | 85083269 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85083468 | 85083590 | 85083468 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85084638 | 85085006 | 85084638 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85085169 | 85085264 | 85085169 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85085574 | 85085690 | 85085574 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85086175 | 85086240 | 85086175 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85086318 | 85087079 | 85086318 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85087722 | 85087912 | 85087722 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | CDS | 85088034 | 85088115 | 85088034 | ID=Msa0962180-mRNA-1:cds;Parent=Msa0962180-mRNA-1 |
| chr6_3 | three_prime_UTR | 85088116 | 85088455 | 85088116 | ID=Msa0962180-mRNA-1:three_prime_utr;Parent=Msa0962180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
