AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1321000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1321000 MtrunA17_Chr8g0352531 89.444 180 8 2 1 175 1 174 1.97e-100 292
Msa1321000 MtrunA17_Chr8g0352531 85.385 130 19 0 176 305 39 168 1.35e-64 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 88 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCATTATGTCCTTCT+AGG 0.088496 8_4:+26120611 None:intergenic
TTTGGAATTGGCTTGTAAAT+TGG 0.156604 8_4:+26120322 None:intergenic
TTTGGAATTGGCTTGTAAAT+TGG 0.157451 8_4:+26115578 None:intergenic
CTTTGGAAAGGCTTGTAAAA+TGG 0.197845 8_4:+26115530 None:intergenic
TTTGGAATAGGTTTGTAAAT+TGG 0.202275 8_4:+26120274 None:intergenic
TTGTGAATAGGTTTATAAAA+TGG 0.206800 8_4:+26115746 None:intergenic
CTTTGGAATAGGCTTGTAAA+TGG 0.212935 8_4:+26120417 None:intergenic
CTTTGGAATAGGCTTGTAAA+TGG 0.221993 8_4:+26115655 None:intergenic
TTTGGAATAGGCTTGTAAAT+TGG 0.232414 8_4:+26120370 None:intergenic
GGAATTGGTTTCTTGAATAT+TGG 0.237384 8_4:+26115767 None:intergenic
GGAATTGGTTTCTTGAATAT+TGG 0.237384 8_4:+26120529 None:intergenic
ATTGGAAAAGGCTTGTAAAT+TGG 0.246161 8_4:+26115626 None:intergenic
TTATAGATTGGAACGTATTT+TGG 0.246929 8_4:+26120460 None:intergenic
TTTGGCATAGGCTTGTAAAT+TGG 0.253749 8_4:+26115608 None:intergenic
TTTGGTGTAGGTTTGTAAAT+TGG 0.267204 8_4:+26120478 None:intergenic
ATTGGAACAGGCTTGTAAAT+TGG 0.276520 8_4:+26120340 None:intergenic
ATTGGAACAGGCTTGTAAAT+TGG 0.276520 8_4:+26120388 None:intergenic
TTGTGAATAGGTTTGTAAAA+TGG 0.278721 8_4:+26120508 None:intergenic
AATGGAATAGGTTTGTAAAT+TGG 0.283599 8_4:+26115548 None:intergenic
ATTGGAATTACCTTTGGAAT+TGG 0.313795 8_4:+26115566 None:intergenic
ATTGGAATTACCTTTGGAAT+AGG 0.316743 8_4:+26115644 None:intergenic
ATTGGAATTACCTTTGGAAT+AGG 0.316743 8_4:+26120358 None:intergenic
ATTGGAATTACCTTTGGAAT+AGG 0.316743 8_4:+26120406 None:intergenic
ATTGGAATGTCTTTGTGAAT+AGG 0.322130 8_4:+26120496 None:intergenic
ATTGGAAGATCTTTGTGAAT+AGG 0.328450 8_4:+26115734 None:intergenic
CAATATGCAAAGGCCACTTT+TGG 0.329589 8_4:-26121485 Msa1321000:CDS
TATTTATACTATAGCTAGTA+AGG 0.335146 8_4:+26121631 None:intergenic
ATAGGCTTGTAAATGGGATT+TGG 0.342549 8_4:+26115662 None:intergenic
ATAGGTTTGTAAATTGGAAT+AGG 0.345184 8_4:+26120280 None:intergenic
ATGGGAATTTCCTTTGGAAT+AGG 0.348694 8_4:+26120262 None:intergenic
AAAGGCTTGTAAAATGGAAT+AGG 0.355928 8_4:+26115536 None:intergenic
ACTGGAATTACCTTTGGAAT+TGG 0.357963 8_4:+26120310 None:intergenic
ATAGGCTTGTAAATGGGAAT+TGG 0.370906 8_4:+26120424 None:intergenic
CAAAAGTGGCCTTTGCATAT+TGG 0.376190 8_4:+26121486 None:intergenic
ATAGGTTTGTAAAATGGAAT+TGG 0.379124 8_4:+26120514 None:intergenic
TTGTAAATTGGAATTACCTT+TGG 0.379719 8_4:+26115560 None:intergenic
TTTACAATGGGAACTACCTT+TGG 0.385302 8_4:+26115513 None:intergenic
TTTACAATGGGAATTTCCTT+TGG 0.389183 8_4:+26120256 None:intergenic
GTAGCAAGAAATGATCCTTC+AGG 0.392442 8_4:-26121409 Msa1321000:intron
TTTGTTATAGGTTTGTAAAT+TGG 0.397658 8_4:+26115716 None:intergenic
ATAGGTTTATAAAATGGAAT+TGG 0.398934 8_4:+26115752 None:intergenic
TTGTAAATTGGAATTACCTT+TGG 0.402895 8_4:+26115590 None:intergenic
ATTGGAATAGGCTTGTAAAC+TGG 0.408974 8_4:+26120292 None:intergenic
TGTAAATGGGATTTGGTTTG+TGG 0.411399 8_4:+26115669 None:intergenic
TTGTAAACTGGAATTACCTT+TGG 0.413189 8_4:+26120304 None:intergenic
TTGTAAATTGGAATTACCTT+TGG 0.416670 8_4:+26115638 None:intergenic
TTGTAAATTGGAATTACCTT+TGG 0.416670 8_4:+26120352 None:intergenic
TTGTAAATTGGAATTACCTT+TGG 0.416670 8_4:+26120400 None:intergenic
ATTGGCTTGTAAATTGGAAC+AGG 0.429206 8_4:+26120328 None:intergenic
ATGGGATTTGGTTTGTGGAT+AGG 0.440647 8_4:+26115674 None:intergenic
ATAGGCTTGTAAATTGGAAC+AGG 0.440807 8_4:+26120376 None:intergenic
ATGGGAATTGGTTTGTGGAT+AGG 0.448083 8_4:+26120436 None:intergenic
GCTTCCCATCTGTGTTCACT+TGG 0.449323 8_4:+26120662 None:intergenic
ACAACAAAGACAAACCTAGA+AGG 0.456489 8_4:-26120625 Msa1321000:CDS
TTGTGGATAGGCTTATAGAT+TGG 0.461177 8_4:+26115686 None:intergenic
GCAACAAAGACAAAACTAGA+AGG 0.461769 8_4:-26115863 Msa1321000:CDS
ATAGGCTTGTAAATTGGAAA+AGG 0.466855 8_4:+26115614 None:intergenic
GCTTCCCATCTGTGTTCACT+TGG 0.478340 8_4:+26115900 None:intergenic
TGTAAATGGGAATTGGTTTG+TGG 0.491139 8_4:+26120431 None:intergenic
TTTGGAATAGGCTTGTAAAT+GGG 0.493329 8_4:+26115656 None:intergenic
TTTGGAATAGGCTTGTAAAT+GGG 0.493642 8_4:+26120418 None:intergenic
ATTGGAATTACCTTTGGCAT+AGG 0.511745 8_4:+26115596 None:intergenic
CTAGAAGGACATAATGAAGA+AGG 0.526236 8_4:-26115848 Msa1321000:CDS
GGAAACCAAGTGAACACAGA+TGG 0.546430 8_4:-26120667 Msa1321000:CDS
CAGGACCAAGTGAACACAGA+TGG 0.548112 8_4:-26115905 Msa1321000:CDS
AATGGGAACTACCTTTGGAA+AGG 0.553837 8_4:+26115518 None:intergenic
AATGAAGAAGGAAAATTCAA+AGG 0.557594 8_4:-26115836 Msa1321000:CDS
CATCTAAAACACAAACTCAA+AGG 0.559830 8_4:-26115806 Msa1321000:CDS
CATCTAAAACACAAACTCAA+AGG 0.559830 8_4:-26120568 Msa1321000:CDS
AAGAGTGGTTTAGAAGTGAA+AGG 0.560442 8_4:+26121552 None:intergenic
AATTTACAAACCTATTCCAA+AGG 0.560996 8_4:-26120272 Msa1321000:CDS
ATTTATACTATAGCTAGTAA+GGG 0.575358 8_4:+26121632 None:intergenic
CATTTACAAGCCTATTCCAA+AGG 0.578514 8_4:-26120416 Msa1321000:CDS
GAAACCAAGTGAACACAGAT+GGG 0.582541 8_4:-26120666 Msa1321000:CDS
AATTTACAAGCCTATTCCAA+AGG 0.584966 8_4:-26120368 Msa1321000:CDS
AATTTACAAGCCAATTCCAA+AGG 0.595922 8_4:-26115576 Msa1321000:CDS
AATTTACAAGCCAATTCCAA+AGG 0.595922 8_4:-26120320 Msa1321000:CDS
GGAACCGAGAAGGCCAAAAG+TGG 0.596014 8_4:+26121472 None:intergenic
AGGACCAAGTGAACACAGAT+GGG 0.600591 8_4:-26115904 Msa1321000:CDS
AAGGTGACAAGGAGCAACAA+AGG 0.600910 8_4:+26121451 None:intergenic
GAGCAACAAAGGAACCGAGA+AGG 0.603460 8_4:+26121462 None:intergenic
AATTTACAAGCCTATGCCAA+AGG 0.603925 8_4:-26115606 Msa1321000:CDS
TAGCATAACAGAAGGTGACA+AGG 0.606710 8_4:+26121440 None:intergenic
CAAGGCCACAAAAGAAAGAG+TGG 0.607186 8_4:+26121537 None:intergenic
TGGGAAGCTTGCAAATGAAG+AGG 0.610090 8_4:-26115885 Msa1321000:CDS
CATTTACAAGCCTATTCCAA+AGG 0.614974 8_4:-26115654 Msa1321000:CDS
GAAAAGCTTCCAATATGCAA+AGG 0.633003 8_4:-26121495 Msa1321000:CDS
AACAGAAGTAGCATAACAGA+AGG 0.639211 8_4:+26121432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTAATTTTAAAAGCA+TGG - chr8_4:26116058-26116077 Msa1321000:intron 10.0%
!!! TTGAATAAAATTTTATTTGA+AGG - chr8_4:26116127-26116146 Msa1321000:intron 10.0%
!!! AAAATTTTGTTTTTAAATGT+TGG + chr8_4:26117828-26117847 None:intergenic 10.0%
!! CAAATATAAATATCAATATT+AGG + chr8_4:26118465-26118484 None:intergenic 10.0%
!!! TTTTATTTAAAATAGTATGT+GGG + chr8_4:26120065-26120084 None:intergenic 10.0%
!!! ATTTTATTTAAAATAGTATG+TGG + chr8_4:26120066-26120085 None:intergenic 10.0%
!! ATTAAAAAAAAAACATATCA+AGG - chr8_4:26120094-26120113 Msa1321000:intron 10.0%
!!! ATCTTGTGTAATTTTTTATT+TGG - chr8_4:26117058-26117077 Msa1321000:intron 15.0%
!! TTCACTTTAATAACTTTAAA+AGG + chr8_4:26117598-26117617 None:intergenic 15.0%
!! TAATTAAATGAATCTATGAT+GGG + chr8_4:26117692-26117711 None:intergenic 15.0%
!! ATAATTAAATGAATCTATGA+TGG + chr8_4:26117693-26117712 None:intergenic 15.0%
!! TCATAGATTCATTTAATTAT+AGG - chr8_4:26117693-26117712 Msa1321000:intron 15.0%
!! TAATTGAATAATATCTTGAT+GGG + chr8_4:26117782-26117801 None:intergenic 15.0%
!! TTAATTGAATAATATCTTGA+TGG + chr8_4:26117783-26117802 None:intergenic 15.0%
!! AAAATAAACATAAAACTCAT+TGG - chr8_4:26117943-26117962 Msa1321000:intron 15.0%
!!! ACTTAAAATTTTAATATTGG+GGG + chr8_4:26118084-26118103 None:intergenic 15.0%
!!! GACTTAAAATTTTAATATTG+GGG + chr8_4:26118085-26118104 None:intergenic 15.0%
!!! GGACTTAAAATTTTAATATT+GGG + chr8_4:26118086-26118105 None:intergenic 15.0%
!! TATTTATATTTGTCTTAATC+AGG - chr8_4:26118473-26118492 Msa1321000:intron 15.0%
!! AAGTAACTAAATTAGTAAAT+AGG - chr8_4:26118496-26118515 Msa1321000:intron 15.0%
!! AGTAACTAAATTAGTAAATA+GGG - chr8_4:26118497-26118516 Msa1321000:intron 15.0%
!! ATAAAATAAACAAGAGATAA+GGG + chr8_4:26119091-26119110 None:intergenic 15.0%
!! AATAAAATAAACAAGAGATA+AGG + chr8_4:26119092-26119111 None:intergenic 15.0%
!!! TCTATGTTATAATTGTATTT+TGG + chr8_4:26119567-26119586 None:intergenic 15.0%
!! CTAATTATTCATTTAAACAT+TGG + chr8_4:26119737-26119756 None:intergenic 15.0%
!!! TGTTAGATTGTTTATATTTT+TGG + chr8_4:26119760-26119779 None:intergenic 15.0%
!! AAGATAATATATGTAATACA+TGG - chr8_4:26119799-26119818 Msa1321000:intron 15.0%
!! AGATAATATATGTAATACAT+GGG - chr8_4:26119800-26119819 Msa1321000:intron 15.0%
!!! TTTATTTAAAATAGTATGTG+GGG + chr8_4:26120064-26120083 None:intergenic 15.0%
!! AATGATATGTGAAAAAAATA+TGG + chr8_4:26121026-26121045 None:intergenic 15.0%
!! ATTTATACTATAGCTAGTAA+GGG + chr8_4:26115535-26115554 None:intergenic 20.0%
!! TATTTATACTATAGCTAGTA+AGG + chr8_4:26115536-26115555 None:intergenic 20.0%
!! ACATTTATATTTCCCTTATT+TGG - chr8_4:26115900-26115919 Msa1321000:CDS 20.0%
!! AAAAAAGAGAGAGAAATTTA+TGG - chr8_4:26115924-26115943 Msa1321000:intron 20.0%
!! AATGAAGAAGAAAAATTCAA+AGG - chr8_4:26116566-26116585 Msa1321000:intron 20.0%
!! AAAAATTACACAAGATAAGT+AGG + chr8_4:26117054-26117073 None:intergenic 20.0%
!!! TTGTGTAATTTTTTATTTGG+AGG - chr8_4:26117061-26117080 Msa1321000:intron 20.0%
!!! TTTTACAATGTTATATAGAC+AGG + chr8_4:26117265-26117284 None:intergenic 20.0%
!!! TTTTACACCAATAACTATAT+CGG - chr8_4:26117305-26117324 Msa1321000:intron 20.0%
!!! CAAAGTTTTCAATAATATTG+AGG + chr8_4:26117543-26117562 None:intergenic 20.0%
!! AGGTAAATATTAAACAATTG+AGG + chr8_4:26117578-26117597 None:intergenic 20.0%
!! TAATCATCTTGTGATAATAT+TGG + chr8_4:26117752-26117771 None:intergenic 20.0%
!! TTACAATTAAGATATGAAAG+TGG + chr8_4:26117983-26118002 None:intergenic 20.0%
!!! GGGACTTAAAATTTTAATAT+TGG + chr8_4:26118087-26118106 None:intergenic 20.0%
!! TAAAAAGATTTAGTTACACA+TGG + chr8_4:26118280-26118299 None:intergenic 20.0%
!!! ATGCTATTTTATTTTAGTGT+CGG - chr8_4:26118378-26118397 Msa1321000:intron 20.0%
!! AAGTAACTAGTTAGTAATTA+GGG - chr8_4:26118605-26118624 Msa1321000:intron 20.0%
!! TATTCCAACAATTAAATAGA+GGG - chr8_4:26118972-26118991 Msa1321000:intron 20.0%
!!! AATAATTCGCTTACTTTTTT+AGG + chr8_4:26119118-26119137 None:intergenic 20.0%
!! AAAAAAGTAAGCGAATTATT+TGG - chr8_4:26119118-26119137 Msa1321000:intron 20.0%
!! ATCATTGTAACTAAAAATGT+TGG + chr8_4:26119251-26119270 None:intergenic 20.0%
!! TCAAGATAACAATTTCATTA+AGG - chr8_4:26119426-26119445 Msa1321000:intron 20.0%
!!! AAATTTTTATTACGTACACA+TGG + chr8_4:26119623-26119642 None:intergenic 20.0%
!! ATGTTATTGAGATTTATTTC+CGG + chr8_4:26120177-26120196 None:intergenic 20.0%
!!! TCTTTTACAACTTTTGATTT+TGG + chr8_4:26120325-26120344 None:intergenic 20.0%
!!! TTTTAAGACTAATTTCTGTT+AGG + chr8_4:26121124-26121143 None:intergenic 20.0%
!! ATAGGTTTATAAAATGGAAT+TGG + chr8_4:26121415-26121434 None:intergenic 20.0%
!! TTGTGAATAGGTTTATAAAA+TGG + chr8_4:26121421-26121440 None:intergenic 20.0%
!!! TTTGTTATAGGTTTGTAAAT+TGG + chr8_4:26121451-26121470 None:intergenic 20.0%
! AGTAGTACATATTCATAGAT+TGG - chr8_4:26115850-26115869 Msa1321000:CDS 25.0%
! GTAGTACATATTCATAGATT+GGG - chr8_4:26115851-26115870 Msa1321000:CDS 25.0%
!!! ATTTTTGTTTACTCTTGGTT+TGG - chr8_4:26115876-26115895 Msa1321000:CDS 25.0%
!!! CTCTCTTTTTTACCAAATAA+GGG + chr8_4:26115915-26115934 None:intergenic 25.0%
!!! TCTCTCTTTTTTACCAAATA+AGG + chr8_4:26115916-26115935 None:intergenic 25.0%
! TCCTTAAAGTCATGTTTAAA+TGG - chr8_4:26115980-26115999 Msa1321000:intron 25.0%
! ACCATTTAAACATGACTTTA+AGG + chr8_4:26115984-26116003 None:intergenic 25.0%
! TTACTCGATTTATAAACTCT+AGG + chr8_4:26116459-26116478 None:intergenic 25.0%
!!! GTTTCTTGAATATTGGTTTT+TGG + chr8_4:26116631-26116650 None:intergenic 25.0%
! ATAGGTTTGTAAAATGGAAT+TGG + chr8_4:26116653-26116672 None:intergenic 25.0%
! TTGTGAATAGGTTTGTAAAA+TGG + chr8_4:26116659-26116678 None:intergenic 25.0%
!! TTATAGATTGGAACGTATTT+TGG + chr8_4:26116707-26116726 None:intergenic 25.0%
! TTGTAAATTGGAATTACCTT+TGG + chr8_4:26116767-26116786 None:intergenic 25.0%
! TTGTAAATTGGAATTACCTT+TGG + chr8_4:26116767-26116786 None:intergenic 25.0%
! ATAGGTTTGTAAATTGGAAT+AGG + chr8_4:26116887-26116906 None:intergenic 25.0%
!! TTTGGAATAGGTTTGTAAAT+TGG + chr8_4:26116893-26116912 None:intergenic 25.0%
! AATTTACAAACCTATTCCAA+AGG - chr8_4:26116892-26116911 Msa1321000:intron 25.0%
!! ATTTATGTGAAAAGGCTTTT+AGG + chr8_4:26116978-26116997 None:intergenic 25.0%
! AATAGTACTAAGATATAGCT+AGG + chr8_4:26117008-26117027 None:intergenic 25.0%
!! TTTCTTTTGTGAATTCTGAT+GGG + chr8_4:26117214-26117233 None:intergenic 25.0%
!! ATTTCTTTTGTGAATTCTGA+TGG + chr8_4:26117215-26117234 None:intergenic 25.0%
! AGTAAAACCGATATAGTTAT+TGG + chr8_4:26117315-26117334 None:intergenic 25.0%
! AAACAAAAAATTCACTGAAG+AGG - chr8_4:26117337-26117356 Msa1321000:intron 25.0%
!! TTTTATAGAACTCAACACTT+AGG + chr8_4:26117376-26117395 None:intergenic 25.0%
! TAAATCAATATTGTCAGAGT+GGG + chr8_4:26117860-26117879 None:intergenic 25.0%
! ATAAATCAATATTGTCAGAG+TGG + chr8_4:26117861-26117880 None:intergenic 25.0%
! ATTGAGAAATTATGAACAAG+AGG + chr8_4:26118154-26118173 None:intergenic 25.0%
!! TAACTAAATCTTTTTACGCT+AGG - chr8_4:26118284-26118303 Msa1321000:intron 25.0%
!! AACTAAATCTTTTTACGCTA+GGG - chr8_4:26118285-26118304 Msa1321000:intron 25.0%
! GAAGTAACTAGTTAGTAATT+AGG - chr8_4:26118604-26118623 Msa1321000:intron 25.0%
!! TAATTACCTTTGAGAAAGTA+AGG - chr8_4:26118836-26118855 Msa1321000:intron 25.0%
! GTATTCCAACAATTAAATAG+AGG - chr8_4:26118971-26118990 Msa1321000:intron 25.0%
! AATTCCCTCTATTTAATTGT+TGG + chr8_4:26118979-26118998 None:intergenic 25.0%
!! AACTAAAAATGTTGGTTATG+TGG + chr8_4:26119243-26119262 None:intergenic 25.0%
! CTTTCAAAAGATGTTTGTTT+CGG + chr8_4:26119482-26119501 None:intergenic 25.0%
! ACATGAAACTGTTATATTAC+TGG - chr8_4:26119700-26119719 Msa1321000:intron 25.0%
!! TGCTTATTCACAAAGTTTTA+AGG + chr8_4:26119942-26119961 None:intergenic 25.0%
!! TCAACATTTTGTCAATCAAA+TGG - chr8_4:26120005-26120024 Msa1321000:intron 25.0%
!!! TATGTTGTTGATTTATGTTG+AGG + chr8_4:26120256-26120275 None:intergenic 25.0%
!!! AACTTTTGATTTTGGAGTTT+TGG + chr8_4:26120317-26120336 None:intergenic 25.0%
! ATGAACTCATGTATAGTATT+AGG - chr8_4:26120476-26120495 Msa1321000:CDS 25.0%
! TGAATATGTGTATATCTATG+TGG + chr8_4:26120697-26120716 None:intergenic 25.0%
!! TTTTTCACATAGATTCACAT+TGG - chr8_4:26120725-26120744 Msa1321000:intron 25.0%
!! AAATGATGATGATGAAATAG+TGG + chr8_4:26120902-26120921 None:intergenic 25.0%
!! TGAAATGATGATGAAAATGA+TGG + chr8_4:26120984-26121003 None:intergenic 25.0%
! TTACTCAAGTTATAAACTCT+TGG + chr8_4:26121223-26121242 None:intergenic 25.0%
!! TAATTTTGAATTTCTTGTGC+AGG - chr8_4:26121240-26121259 Msa1321000:intron 25.0%
! AATGAAGAAGGAAAATTCAA+AGG - chr8_4:26121328-26121347 Msa1321000:intron 25.0%
!!! GTTTCTTGAATATTGGTTTT+TGG + chr8_4:26116631-26116650 None:intergenic 25.0%
!!! ATTGGAACGTATTTTGTTAT+AGG + chr8_4:26121463-26121482 None:intergenic 25.0%
! TTGTAAATTGGAATTACCTT+TGG + chr8_4:26116767-26116786 None:intergenic 25.0%
! TTGTAAATTGGAATTACCTT+TGG + chr8_4:26116767-26116786 None:intergenic 25.0%
! TTGTAAATTGGAATTACCTT+TGG + chr8_4:26116767-26116786 None:intergenic 25.0%
! AATGGAATAGGTTTGTAAAT+TGG + chr8_4:26121619-26121638 None:intergenic 25.0%
CATGGTTGAAAAATTCAACA+AGG + chr8_4:26115648-26115667 None:intergenic 30.0%
TATTATACTCACAAACCTGA+AGG + chr8_4:26115773-26115792 None:intergenic 30.0%
!!! GGGTTATTTTTGTTTACTCT+TGG - chr8_4:26115871-26115890 Msa1321000:CDS 30.0%
AAACAAAACAAACACACACT+TGG - chr8_4:26116418-26116437 Msa1321000:intron 30.0%
! TAATTTTGCATTTCTTGTGC+AGG - chr8_4:26116476-26116495 Msa1321000:intron 30.0%
! CATCTAAAACACAAACTCAA+AGG - chr8_4:26116596-26116615 Msa1321000:intron 30.0%
! GGAATTGGTTTCTTGAATAT+TGG + chr8_4:26116638-26116657 None:intergenic 30.0%
ATTGGAATGTCTTTGTGAAT+AGG + chr8_4:26116671-26116690 None:intergenic 30.0%
! TTTGGTGTAGGTTTGTAAAT+TGG + chr8_4:26116689-26116708 None:intergenic 30.0%
! TTTGGAATAGGCTTGTAAAT+GGG + chr8_4:26116749-26116768 None:intergenic 30.0%
!! ATTGGAATTACCTTTGGAAT+AGG + chr8_4:26116761-26116780 None:intergenic 30.0%
! TTTGGAATAGGCTTGTAAAT+TGG + chr8_4:26116749-26116768 None:intergenic 30.0%
AATTTACAAGCCTATTCCAA+AGG - chr8_4:26116796-26116815 Msa1321000:intron 30.0%
!! ATTGGAATTACCTTTGGAAT+AGG + chr8_4:26116761-26116780 None:intergenic 30.0%
!! TTTGGAATTGGCTTGTAAAT+TGG + chr8_4:26116845-26116864 None:intergenic 30.0%
AATTTACAAGCCAATTCCAA+AGG - chr8_4:26116844-26116863 Msa1321000:intron 30.0%
TTGTAAACTGGAATTACCTT+TGG + chr8_4:26116863-26116882 None:intergenic 30.0%
TTTACAATGGGAATTTCCTT+TGG + chr8_4:26116911-26116930 None:intergenic 30.0%
!! TAATGGATTGGCTTTACAAT+GGG + chr8_4:26116923-26116942 None:intergenic 30.0%
!! TTAATGGATTGGCTTTACAA+TGG + chr8_4:26116924-26116943 None:intergenic 30.0%
! GCATGATAATCTTAATGGAT+TGG + chr8_4:26116935-26116954 None:intergenic 30.0%
TCCATTAAGATTATCATGCT+TGG - chr8_4:26116936-26116955 Msa1321000:intron 30.0%
TCCAAGCATGATAATCTTAA+TGG + chr8_4:26116940-26116959 None:intergenic 30.0%
GTGTAGCTATTTATGTGAAA+AGG + chr8_4:26116986-26117005 None:intergenic 30.0%
GCAAACTGAGAACTTTATTA+AGG + chr8_4:26117119-26117138 None:intergenic 30.0%
CGAATACATCAATGACAAAT+TGG + chr8_4:26117141-26117160 None:intergenic 30.0%
TTCGCTGAATATCTATAATG+TGG - chr8_4:26117157-26117176 Msa1321000:intron 30.0%
!! ATATTGAGGAGTGCTTTAAA+GGG + chr8_4:26117529-26117548 None:intergenic 30.0%
!! AATATTGAGGAGTGCTTTAA+AGG + chr8_4:26117530-26117549 None:intergenic 30.0%
TTAAACAATTGAGGACGAAA+GGG + chr8_4:26117569-26117588 None:intergenic 30.0%
ATTAAACAATTGAGGACGAA+AGG + chr8_4:26117570-26117589 None:intergenic 30.0%
TGAAGAGTTGAATAGTCATA+AGG - chr8_4:26117626-26117645 Msa1321000:intron 30.0%
ATTTCTCAATTAGAACGAAG+CGG - chr8_4:26118164-26118183 Msa1321000:intron 30.0%
!! TAGGGTATGTGTTATTTCTA+GGG - chr8_4:26118252-26118271 Msa1321000:intron 30.0%
!! TCTAAGATGAACCTCTATTT+TGG - chr8_4:26118309-26118328 Msa1321000:intron 30.0%
TTATCCAACAACCAAAATAG+AGG + chr8_4:26118323-26118342 None:intergenic 30.0%
GGATGTGAGATACATAATAT+TGG - chr8_4:26118561-26118580 Msa1321000:intron 30.0%
TAGTTAGTAATTAGGGAAAC+TGG - chr8_4:26118612-26118631 Msa1321000:intron 30.0%
CTTAAAGGTTCTCTCATATA+CGG + chr8_4:26118762-26118781 None:intergenic 30.0%
! AGAGAACCTTTAAGAAGATT+GGG - chr8_4:26118768-26118787 Msa1321000:intron 30.0%
TATCTAAGTGATGAGTTCAT+GGG + chr8_4:26118924-26118943 None:intergenic 30.0%
TAACATTCTGCAATCAAAAC+AGG - chr8_4:26119019-26119038 Msa1321000:intron 30.0%
CTACTTAGCACTTTATTACT+TGG - chr8_4:26119172-26119191 Msa1321000:intron 30.0%
! AAATGTTGGTTATGTGGTTA+GGG + chr8_4:26119237-26119256 None:intergenic 30.0%
! AAAATGTTGGTTATGTGGTT+AGG + chr8_4:26119238-26119257 None:intergenic 30.0%
! TTTGATTTCACTTGTGGAAA+TGG + chr8_4:26119396-26119415 None:intergenic 30.0%
! TTCTTCTTTGATTTCACTTG+TGG + chr8_4:26119402-26119421 None:intergenic 30.0%
TTAAATACCTAGAGATGTGA+AGG + chr8_4:26119533-26119552 None:intergenic 30.0%
! ATCCACTCTCAAATTTTCTT+AGG - chr8_4:26119868-26119887 Msa1321000:intron 30.0%
TTCCTAAGAAAATTTGAGAG+TGG + chr8_4:26119873-26119892 None:intergenic 30.0%
AAATAGTATGTGGGGTTTAA+GGG + chr8_4:26120056-26120075 None:intergenic 30.0%
AAAATAGTATGTGGGGTTTA+AGG + chr8_4:26120057-26120076 None:intergenic 30.0%
CATAAAATATCAAGTCACAC+CGG - chr8_4:26120155-26120174 Msa1321000:intron 30.0%
TTTATATTATACCCTACGTG+TGG + chr8_4:26120439-26120458 None:intergenic 30.0%
GACAAGAATACATGTGATTA+TGG + chr8_4:26120543-26120562 None:intergenic 30.0%
AATCTCAAATCATCTTCACA+AGG - chr8_4:26120586-26120605 Msa1321000:CDS 30.0%
AAACAAAACAAACACACCTT+TGG - chr8_4:26121182-26121201 Msa1321000:intron 30.0%
! CATCTAAAACACAAACTCAA+AGG - chr8_4:26116596-26116615 Msa1321000:intron 30.0%
! GGAATTGGTTTCTTGAATAT+TGG + chr8_4:26116638-26116657 None:intergenic 30.0%
ATTGGAAGATCTTTGTGAAT+AGG + chr8_4:26121433-26121452 None:intergenic 30.0%
! TTTGGAATAGGCTTGTAAAT+GGG + chr8_4:26116749-26116768 None:intergenic 30.0%
!! ATTGGAATTACCTTTGGAAT+AGG + chr8_4:26116761-26116780 None:intergenic 30.0%
ATTGGAAAAGGCTTGTAAAT+TGG + chr8_4:26121541-26121560 None:intergenic 30.0%
ATAGGCTTGTAAATTGGAAA+AGG + chr8_4:26121553-26121572 None:intergenic 30.0%
!! TTTGGAATTGGCTTGTAAAT+TGG + chr8_4:26116845-26116864 None:intergenic 30.0%
AATTTACAAGCCAATTCCAA+AGG - chr8_4:26116844-26116863 Msa1321000:intron 30.0%
!! ATTGGAATTACCTTTGGAAT+TGG + chr8_4:26116761-26116780 None:intergenic 30.0%
AAAGGCTTGTAAAATGGAAT+AGG + chr8_4:26121631-26121650 None:intergenic 30.0%
AAGAGTGGTTTAGAAGTGAA+AGG + chr8_4:26115615-26115634 None:intergenic 35.0%
! CTAAACCACTCTTTCTTTTG+TGG - chr8_4:26115622-26115641 Msa1321000:CDS 35.0%
! CATATTGGAAGCTTTTCTCA+TGG + chr8_4:26115666-26115685 None:intergenic 35.0%
GAAAAGCTTCCAATATGCAA+AGG - chr8_4:26115669-26115688 Msa1321000:CDS 35.0%
AACAGAAGTAGCATAACAGA+AGG + chr8_4:26115735-26115754 None:intergenic 35.0%
ACTATCGTCATAATCACACA+AGG + chr8_4:26116028-26116047 None:intergenic 35.0%
ATTCAAACCAATACACACAC+AGG - chr8_4:26116228-26116247 Msa1321000:intron 35.0%
GGTTCAAGAAGAATTGAACT+CGG - chr8_4:26116260-26116279 Msa1321000:intron 35.0%
ACAACAAAGACAAACCTAGA+AGG - chr8_4:26116539-26116558 Msa1321000:intron 35.0%
CTTCTTCATTATGTCCTTCT+AGG + chr8_4:26116556-26116575 None:intergenic 35.0%
!!! ATTGGAACGTATTTTGGTGT+AGG + chr8_4:26116701-26116720 None:intergenic 35.0%
TTGTGGATAGGCTTATAGAT+TGG + chr8_4:26116719-26116738 None:intergenic 35.0%
!! TGTAAATGGGAATTGGTTTG+TGG + chr8_4:26116736-26116755 None:intergenic 35.0%
ATAGGCTTGTAAATGGGAAT+TGG + chr8_4:26116743-26116762 None:intergenic 35.0%
!! CTTTGGAATAGGCTTGTAAA+TGG + chr8_4:26116750-26116769 None:intergenic 35.0%
CATTTACAAGCCTATTCCAA+AGG - chr8_4:26116748-26116767 Msa1321000:intron 35.0%
ATTGGAACAGGCTTGTAAAT+TGG + chr8_4:26116779-26116798 None:intergenic 35.0%
ATAGGCTTGTAAATTGGAAC+AGG + chr8_4:26116791-26116810 None:intergenic 35.0%
ATTGGAACAGGCTTGTAAAT+TGG + chr8_4:26116779-26116798 None:intergenic 35.0%
!! ATTGGCTTGTAAATTGGAAC+AGG + chr8_4:26116839-26116858 None:intergenic 35.0%
!! ACTGGAATTACCTTTGGAAT+TGG + chr8_4:26116857-26116876 None:intergenic 35.0%
ATTGGAATAGGCTTGTAAAC+TGG + chr8_4:26116875-26116894 None:intergenic 35.0%
!! ATGGGAATTTCCTTTGGAAT+AGG + chr8_4:26116905-26116924 None:intergenic 35.0%
AGAAAGAGACTCAGTAAAGT+TGG - chr8_4:26117183-26117202 Msa1321000:intron 35.0%
! ATGTGTTTGCTACTCTCTAT+GGG - chr8_4:26117442-26117461 Msa1321000:intron 35.0%
!! TATTGAGGAGTGCTTTAAAG+GGG + chr8_4:26117528-26117547 None:intergenic 35.0%
TAAACAATTGAGGACGAAAG+GGG + chr8_4:26117568-26117587 None:intergenic 35.0%
CCATTCAACTCTTCATGAAA+GGG + chr8_4:26117664-26117683 None:intergenic 35.0%
ACCATTCAACTCTTCATGAA+AGG + chr8_4:26117665-26117684 None:intergenic 35.0%
! GAATAATATCTTGATGGGTC+TGG + chr8_4:26117777-26117796 None:intergenic 35.0%
CTCTAGTAGATGATTCTTGT+TGG + chr8_4:26118032-26118051 None:intergenic 35.0%
GAATCATCTACTAGAGCTAA+AGG - chr8_4:26118036-26118055 Msa1321000:intron 35.0%
! CAAGAGGCGTGATATTTATA+GGG + chr8_4:26118138-26118157 None:intergenic 35.0%
! ACAAGAGGCGTGATATTTAT+AGG + chr8_4:26118139-26118158 None:intergenic 35.0%
ACACATACCCTAGAAATACT+TGG + chr8_4:26118244-26118263 None:intergenic 35.0%
!! CTAGGGTATGTGTTATTTCT+AGG - chr8_4:26118251-26118270 Msa1321000:intron 35.0%
!!! TGAACCTCTATTTTGGTTGT+TGG - chr8_4:26118316-26118335 Msa1321000:intron 35.0%
ACCCTGAGATAAAAGTAGTT+AGG - chr8_4:26118539-26118558 Msa1321000:intron 35.0%
!! CCCTAACTACTTTTATCTCA+GGG + chr8_4:26118543-26118562 None:intergenic 35.0%
CCCTGAGATAAAAGTAGTTA+GGG - chr8_4:26118540-26118559 Msa1321000:intron 35.0%
!! TCCCTAACTACTTTTATCTC+AGG + chr8_4:26118544-26118563 None:intergenic 35.0%
! AGTTACTTCCTGATTTGAGT+AGG + chr8_4:26118593-26118612 None:intergenic 35.0%
TCAAGGAGAATGAAGTTACT+GGG + chr8_4:26118659-26118678 None:intergenic 35.0%
TTCAAGGAGAATGAAGTTAC+TGG + chr8_4:26118660-26118679 None:intergenic 35.0%
! GAGAGAACCTTTAAGAAGAT+TGG - chr8_4:26118767-26118786 Msa1321000:intron 35.0%
TGTAGTCCCAATCTTCTTAA+AGG + chr8_4:26118777-26118796 None:intergenic 35.0%
CTATCTAAGTGATGAGTTCA+TGG + chr8_4:26118925-26118944 None:intergenic 35.0%
! AATGTTGGTTATGTGGTTAG+GGG + chr8_4:26119236-26119255 None:intergenic 35.0%
AACACAACCAATCCCATATA+AGG - chr8_4:26119345-26119364 Msa1321000:intron 35.0%
ACACAACCAATCCCATATAA+GGG - chr8_4:26119346-26119365 Msa1321000:intron 35.0%
AAGAAAACCTTCACATCTCT+AGG - chr8_4:26119523-26119542 Msa1321000:intron 35.0%
TGATTGCATGTCTTTGCAAT+TGG + chr8_4:26119663-26119682 None:intergenic 35.0%
ATAGTCAACGAAAGTTTCCA+AGG + chr8_4:26120367-26120386 None:intergenic 35.0%
TGAATGATATGTATTCGACG+TGG + chr8_4:26120642-26120661 None:intergenic 35.0%
!! GAAACTGTGTTATTTGACGA+TGG + chr8_4:26120675-26120694 None:intergenic 35.0%
ATGATATGTTCATGCAGTCA+TGG + chr8_4:26120810-26120829 None:intergenic 35.0%
! TGATGATGATGAAATAGTGG+CGG + chr8_4:26120899-26120918 None:intergenic 35.0%
! GATGATAATGTGACGAGTAA+TGG + chr8_4:26121060-26121079 None:intergenic 35.0%
GCAACAAAGACAAAACTAGA+AGG - chr8_4:26121301-26121320 Msa1321000:intron 35.0%
CTAGAAGGACATAATGAAGA+AGG - chr8_4:26116554-26116573 Msa1321000:intron 35.0%
TTGTGGATAGGCTTATAGAT+TGG + chr8_4:26116719-26116738 None:intergenic 35.0%
!! TGTAAATGGGATTTGGTTTG+TGG + chr8_4:26121498-26121517 None:intergenic 35.0%
ATAGGCTTGTAAATGGGATT+TGG + chr8_4:26121505-26121524 None:intergenic 35.0%
!! CTTTGGAATAGGCTTGTAAA+TGG + chr8_4:26116750-26116769 None:intergenic 35.0%
CATTTACAAGCCTATTCCAA+AGG - chr8_4:26116748-26116767 Msa1321000:intron 35.0%
TTTGGCATAGGCTTGTAAAT+TGG + chr8_4:26121559-26121578 None:intergenic 35.0%
AATTTACAAGCCTATGCCAA+AGG - chr8_4:26121558-26121577 Msa1321000:five_prime_UTR 35.0%
ATTGGAATTACCTTTGGCAT+AGG + chr8_4:26121571-26121590 None:intergenic 35.0%
! CTTTGGAAAGGCTTGTAAAA+TGG + chr8_4:26121637-26121656 None:intergenic 35.0%
! CATTTTACAAGCCTTTCCAA+AGG - chr8_4:26121635-26121654 Msa1321000:five_prime_UTR 35.0%
CAAAAGTGGCCTTTGCATAT+TGG + chr8_4:26115681-26115700 None:intergenic 40.0%
!! CAATATGCAAAGGCCACTTT+TGG - chr8_4:26115679-26115698 Msa1321000:CDS 40.0%
TAGCATAACAGAAGGTGACA+AGG + chr8_4:26115727-26115746 None:intergenic 40.0%
GTAGCAAGAAATGATCCTTC+AGG - chr8_4:26115755-26115774 Msa1321000:CDS 40.0%
GAAACCAAGTGAACACAGAT+GGG - chr8_4:26116498-26116517 Msa1321000:intron 40.0%
!! ATGGGAATTGGTTTGTGGAT+AGG + chr8_4:26116731-26116750 None:intergenic 40.0%
TAGAGAGTAGCAAACACATG+TGG + chr8_4:26117441-26117460 None:intergenic 40.0%
! CATGTGTTTGCTACTCTCTA+TGG - chr8_4:26117441-26117460 Msa1321000:intron 40.0%
! TGTGTTTGCTACTCTCTATG+GGG - chr8_4:26117443-26117462 Msa1321000:intron 40.0%
CAACTCTTCATGAAAGGGTA+TGG + chr8_4:26117659-26117678 None:intergenic 40.0%
CCCTTTCATGAAGAGTTGAA+TGG - chr8_4:26117661-26117680 Msa1321000:intron 40.0%
! ACTCATTGGTTGAGAACTAG+TGG - chr8_4:26117957-26117976 Msa1321000:intron 40.0%
TCAAGAGGAAGACAAACACT+AGG - chr8_4:26118188-26118207 Msa1321000:intron 40.0%
ACAAACACTAGGAGCTTCAA+GGG - chr8_4:26118199-26118218 Msa1321000:intron 40.0%
TCCTCACTCCAAGTATTTCT+AGG - chr8_4:26118233-26118252 Msa1321000:intron 40.0%
! CCTCACTCCAAGTATTTCTA+GGG - chr8_4:26118234-26118253 Msa1321000:intron 40.0%
ACTTCATTCTCCTTGAACCT+TGG - chr8_4:26118663-26118682 Msa1321000:intron 40.0%
ATTCTCCTTGAACCTTGGTA+AGG - chr8_4:26118668-26118687 Msa1321000:intron 40.0%
AAGATTGGGACTACACTAGT+GGG - chr8_4:26118782-26118801 Msa1321000:intron 40.0%
GACTACACTAGTGGGAATTT+AGG - chr8_4:26118790-26118809 Msa1321000:intron 40.0%
AGTTGCACATGTTGATCACA+CGG + chr8_4:26118878-26118897 None:intergenic 40.0%
TGATTGCAGAATGTTAGCGA+CGG + chr8_4:26119015-26119034 None:intergenic 40.0%
!! AGTAGAGTATCGTATCCACA+TGG + chr8_4:26119157-26119176 None:intergenic 40.0%
!!! GGGATTGGTTGTGTTTTCTT+GGG + chr8_4:26119340-26119359 None:intergenic 40.0%
!!! TGGGATTGGTTGTGTTTTCT+TGG + chr8_4:26119341-26119360 None:intergenic 40.0%
ATGAGTCCCTTATATGGGAT+TGG + chr8_4:26119355-26119374 None:intergenic 40.0%
GAAGCATGAGTCCCTTATAT+GGG + chr8_4:26119360-26119379 None:intergenic 40.0%
! AGAAGCATGAGTCCCTTATA+TGG + chr8_4:26119361-26119380 None:intergenic 40.0%
!!! GATTTTGGAGTTTTGGCTAG+TGG + chr8_4:26120310-26120329 None:intergenic 40.0%
TATCACTTGTCACTGGAACT+TGG - chr8_4:26120779-26120798 Msa1321000:intron 40.0%
!! ATGGGATTTGGTTTGTGGAT+AGG + chr8_4:26121493-26121512 None:intergenic 40.0%
CAAGGCCACAAAAGAAAGAG+TGG + chr8_4:26115630-26115649 None:intergenic 45.0%
AAGGTGACAAGGAGCAACAA+AGG + chr8_4:26115716-26115735 None:intergenic 45.0%
ACACACTTGGCCATTAAGCT+AGG - chr8_4:26116431-26116450 Msa1321000:intron 45.0%
ACTCTAGGTGCCTAGCTTAA+TGG + chr8_4:26116444-26116463 None:intergenic 45.0%
GGAAACCAAGTGAACACAGA+TGG - chr8_4:26116497-26116516 Msa1321000:intron 45.0%
! CACATGAAGTTGGTCGTTAG+GGG + chr8_4:26118107-26118126 None:intergenic 45.0%
! CCACATGAAGTTGGTCGTTA+GGG + chr8_4:26118108-26118127 None:intergenic 45.0%
! TCCACATGAAGTTGGTCGTT+AGG + chr8_4:26118109-26118128 None:intergenic 45.0%
GGAGAGTTTCCACATGAAGT+TGG + chr8_4:26118117-26118136 None:intergenic 45.0%
TTAGAACGAAGCGGTTCAAG+AGG - chr8_4:26118173-26118192 Msa1321000:intron 45.0%
GACAAACACTAGGAGCTTCA+AGG - chr8_4:26118198-26118217 Msa1321000:intron 45.0%
CCCTAGAAATACTTGGAGTG+AGG + chr8_4:26118237-26118256 None:intergenic 45.0%
GTATCAGGGTTACGCTTCAA+AGG + chr8_4:26118418-26118437 None:intergenic 45.0%
TATCTCAGGGTTCTGCTCTA+TGG + chr8_4:26118530-26118549 None:intergenic 45.0%
GGTGCAAACCTACTCAAATC+AGG - chr8_4:26118582-26118601 Msa1321000:intron 45.0%
! AGTTACTGGGCTGATTTCAG+TGG + chr8_4:26118646-26118665 None:intergenic 45.0%
GTCTACCTTACCAAGGTTCA+AGG + chr8_4:26118676-26118695 None:intergenic 45.0%
TACTAGCGTCTACCTTACCA+AGG + chr8_4:26118683-26118702 None:intergenic 45.0%
TTGGTAAGGTAGACGCTAGT+AGG - chr8_4:26118682-26118701 Msa1321000:intron 45.0%
TGGTAAGGTAGACGCTAGTA+GGG - chr8_4:26118683-26118702 Msa1321000:intron 45.0%
CTCTCGATAGTTCGACAAAC+GGG + chr8_4:26118712-26118731 None:intergenic 45.0%
CCTCTCGATAGTTCGACAAA+CGG + chr8_4:26118713-26118732 None:intergenic 45.0%
CGTTTGTCGAACTATCGAGA+GGG - chr8_4:26118711-26118730 Msa1321000:intron 45.0%
GAAGATTGGGACTACACTAG+TGG - chr8_4:26118781-26118800 Msa1321000:intron 45.0%
ATGGGGCCTTACTTTCTCAA+AGG + chr8_4:26118845-26118864 None:intergenic 45.0%
TCACACGGGTAGGTATGTAT+GGG + chr8_4:26118863-26118882 None:intergenic 45.0%
ATCACACGGGTAGGTATGTA+TGG + chr8_4:26118864-26118883 None:intergenic 45.0%
GTTGCACATGTTGATCACAC+GGG + chr8_4:26118877-26118896 None:intergenic 45.0%
TGTGCAACTCGACAACTGAT+AGG - chr8_4:26118889-26118908 Msa1321000:intron 45.0%
! GAGTATCGTATCCACATGGA+TGG + chr8_4:26119153-26119172 None:intergenic 45.0%
!! GGGTGATGATGGTTGGATTT+AGG + chr8_4:26119216-26119235 None:intergenic 45.0%
TATGTGGTTAGGGGTGATGA+TGG + chr8_4:26119227-26119246 None:intergenic 45.0%
AGTATGCGTCAAGAAGTCCT+TGG - chr8_4:26120347-26120366 Msa1321000:CDS 45.0%
AGCTGCACATCTACACAACA+AGG - chr8_4:26120396-26120415 Msa1321000:CDS 45.0%
TATACCCTACGTGTGGCAAA+TGG + chr8_4:26120432-26120451 None:intergenic 45.0%
ATCGCACTATCACTTGTCAC+TGG - chr8_4:26120772-26120791 Msa1321000:intron 45.0%
ACACCTTTGGCCATTGAACT+AGG - chr8_4:26121195-26121214 Msa1321000:intron 45.0%
ACTCTTGGAGCCTAGTTCAA+TGG + chr8_4:26121208-26121227 None:intergenic 45.0%
AGGACCAAGTGAACACAGAT+GGG - chr8_4:26121260-26121279 Msa1321000:intron 45.0%
TGGGAAGCTTGCAAATGAAG+AGG - chr8_4:26116517-26116536 Msa1321000:intron 45.0%
!!! ATAATTTAGTTTTTAATAAA+AGG + chr8_4:26116177-26116196 None:intergenic 5.0%
!!! AAGGCCACTTTTGGCCTTCT+CGG - chr8_4:26115688-26115707 Msa1321000:CDS 50.0%
GAGCAACAAAGGAACCGAGA+AGG + chr8_4:26115705-26115724 None:intergenic 50.0%
CGTAGTGCCTGTGTGTGTAT+TGG + chr8_4:26116238-26116257 None:intergenic 50.0%
TACACACACAGGCACTACGT+TGG - chr8_4:26116239-26116258 Msa1321000:intron 50.0%
GCTTCCCATCTGTGTTCACT+TGG + chr8_4:26116505-26116524 None:intergenic 50.0%
CCCTAACGACCAACTTCATG+TGG - chr8_4:26118105-26118124 Msa1321000:intron 50.0%
AACACTAGGAGCTTCAAGGG+AGG - chr8_4:26118202-26118221 Msa1321000:intron 50.0%
GAAGCGTAACCCTGATACCT+AGG - chr8_4:26118420-26118439 Msa1321000:intron 50.0%
ACCCTGATACCTAGGCACTT+AGG - chr8_4:26118428-26118447 Msa1321000:intron 50.0%
CCCTAAGTGCCTAGGTATCA+GGG + chr8_4:26118432-26118451 None:intergenic 50.0%
CCCTGATACCTAGGCACTTA+GGG - chr8_4:26118429-26118448 Msa1321000:intron 50.0%
TCCCTAAGTGCCTAGGTATC+AGG + chr8_4:26118433-26118452 None:intergenic 50.0%
TGTCACATCCCTAAGTGCCT+AGG + chr8_4:26118440-26118459 None:intergenic 50.0%
CCGTTTGTCGAACTATCGAG+AGG - chr8_4:26118710-26118729 Msa1321000:intron 50.0%
CACACGGGTAGGTATGTATG+GGG + chr8_4:26118862-26118881 None:intergenic 50.0%
CACATGTTGATCACACGGGT+AGG + chr8_4:26118873-26118892 None:intergenic 50.0%
GGTTGAAACGACCATCCATG+TGG - chr8_4:26119139-26119158 Msa1321000:intron 50.0%
!! TGGTTAGGGGTGATGATGGT+TGG + chr8_4:26119223-26119242 None:intergenic 50.0%
TGGCTAGTGGTGCTCTGATT+AGG + chr8_4:26120297-26120316 None:intergenic 50.0%
AGAGACCATTTGCCACACGT+AGG - chr8_4:26120424-26120443 Msa1321000:CDS 50.0%
GAGACCATTTGCCACACGTA+GGG - chr8_4:26120425-26120444 Msa1321000:CDS 50.0%
GAGCCTAGTTCAATGGCCAA+AGG + chr8_4:26121201-26121220 None:intergenic 50.0%
CAGGACCAAGTGAACACAGA+TGG - chr8_4:26121259-26121278 Msa1321000:intron 50.0%
GCTTCCCATCTGTGTTCACT+TGG + chr8_4:26116505-26116524 None:intergenic 50.0%
GGAACCGAGAAGGCCAAAAG+TGG + chr8_4:26115695-26115714 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 26115526 26121660 26115526 ID=Msa1321000;Name=Msa1321000
chr8_4 mRNA 26115526 26121660 26115526 ID=Msa1321000-mRNA-1;Parent=Msa1321000;Name=Msa1321000-mRNA-1;_AED=0.05;_eAED=0.05;_QI=139|0.33|0.25|1|0.33|0.5|4|0|307
chr8_4 exon 26115526 26115924 26115526 ID=Msa1321000-mRNA-1:exon:8964;Parent=Msa1321000-mRNA-1
chr8_4 exon 26120261 26120458 26120261 ID=Msa1321000-mRNA-1:exon:8963;Parent=Msa1321000-mRNA-1
chr8_4 exon 26120474 26120688 26120474 ID=Msa1321000-mRNA-1:exon:8962;Parent=Msa1321000-mRNA-1
chr8_4 exon 26121410 26121660 26121410 ID=Msa1321000-mRNA-1:exon:8961;Parent=Msa1321000-mRNA-1
chr8_4 five_prime_UTR 26121522 26121660 26121522 ID=Msa1321000-mRNA-1:five_prime_utr;Parent=Msa1321000-mRNA-1
chr8_4 CDS 26121410 26121521 26121410 ID=Msa1321000-mRNA-1:cds;Parent=Msa1321000-mRNA-1
chr8_4 CDS 26120474 26120688 26120474 ID=Msa1321000-mRNA-1:cds;Parent=Msa1321000-mRNA-1
chr8_4 CDS 26120261 26120458 26120261 ID=Msa1321000-mRNA-1:cds;Parent=Msa1321000-mRNA-1
chr8_4 CDS 26115526 26115924 26115526 ID=Msa1321000-mRNA-1:cds;Parent=Msa1321000-mRNA-1
Gene Sequence

>Msa1321000

ATGAGAAAAGCTTCCAATATGCAAAGGCCACTTTTGGCCTTCTCGGTTCCTTTGTTGCTCCTTGTCACCTTCTGTTATGCTACTTCTGTTGTAGCAAGAAATGATCCTTCAGGAAACCAAGTGAACACAGATGGGAAGCTTGCAAATGAAGAGACAACAAAGACAAACCTAGAAGGACATAATGAAGAAGAAAAATTCAAAGGATTTTTTCATCTAAAACACAAACTCAAAGGATATTTTCACCAAAAACCAATATTCAAGAAACCAATTCCATTTTACAAACCTATTCACAAAGACATTCCAATTTACAAACCTACACCAAAATACCCTATCCACAAACCAATTCCCATTTACAAGCCTATTCCAAAGGTAATTCCAATTTACAAGCCTGTTCCAATTTACAAGCCTATTCCAAAGGTAATTCCAATTTACAAGCCTGTTCCAATTTACAAGCCAATTCCAAAGGTAATTCCAGTTTACAAGCCTATTCCAATTTACAAACCTATTCCAAAGGAAATTCCCATTGACCAAGTGAACACAGATGGGAAGCTTGCAAATGAAGAGGCAACAAAGACAAAACTAGAAGGACATAATGAAGAAGGAAAATTCAAAGGATTTTTTCATCTAAAACACAAACTCAAAGGATATTTTTACCAAAAACCAATATTCAAGAAACCAATTCCATTTTATAAACCTATTCACAAAGATCTTCCAATTTACAAACCTATAACAAAATACGTTCCAATCTATAAGCCTATCCACAAACCAAATCCCATTTACAAGCCTATTCCAAAGGTAATTCCAATTTACAAGCCTTTTCCAATTTACAAGCCTATGCCAAAGGTAATTCCAATTTACAAGCCAATTCCAAAGGTAATTCCAATTTACAAACCTATTCCATTTTACAAGCCTTTCCAAAGGTAG

Protein sequence

>Msa1321000

MRKASNMQRPLLAFSVPLLLLVTFCYATSVVARNDPSGNQVNTDGKLANEETTKTNLEGHNEEEKFKGFFHLKHKLKGYFHQKPIFKKPIPFYKPIHKDIPIYKPTPKYPIHKPIPIYKPIPKVIPIYKPVPIYKPIPKVIPIYKPVPIYKPIPKVIPVYKPIPIYKPIPKEIPIDQVNTDGKLANEEATKTKLEGHNEEGKFKGFFHLKHKLKGYFYQKPIFKKPIPFYKPIHKDLPIYKPITKYVPIYKPIHKPNPIYKPIPKVIPIYKPFPIYKPMPKVIPIYKPIPKVIPIYKPIPFYKPFQR*