AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044220 MtrunA17_Chr1g0210831 89.801 755 37 5 1 721 1 749 0.0 1353
Msa0044220 MtrunA17_Chr8g0377211 32.090 134 91 0 582 715 16 149 3.30e-19 85.5
Msa0044220 MtrunA17_Chr3g0115111 35.200 125 79 2 590 713 86 209 5.23e-14 75.9
Msa0044220 MtrunA17_Chr3g0115111 32.407 108 73 0 587 694 106 213 4.81e-11 66.2
Msa0044220 MtrunA17_Chr5g0424301 34.375 128 82 2 587 713 94 220 6.90e-14 75.5
Msa0044220 MtrunA17_Chr8g0377191 31.746 126 86 0 587 712 14 139 1.05e-13 70.9
Msa0044220 MtrunA17_Chr8g0377191 30.894 123 85 0 590 712 63 185 2.09e-13 69.7
Msa0044220 MtrunA17_Chr1g0171491 27.861 201 101 5 538 713 31 212 1.29e-13 74.7
Msa0044220 MtrunA17_Chr8g0383331 33.333 114 76 0 592 705 34 147 1.84e-13 68.9
Msa0044220 MtrunA17_Chr8g0383331 31.633 98 67 0 587 684 52 149 1.11e-11 63.9
Msa0044220 MtrunA17_Chr1g0180261 26.490 151 88 1 587 714 53 203 1.84e-12 70.9
Msa0044220 MtrunA17_Chr8g0385201 31.429 140 71 3 599 714 45 183 1.96e-12 70.9
Msa0044220 MtrunA17_Chr7g0233351 30.597 134 93 0 581 714 234 367 3.60e-12 69.3
Msa0044220 MtrunA17_Chr8g0336161 32.836 134 90 0 581 714 239 372 4.44e-12 68.9
Msa0044220 MtrunA17_Chr8g0336161 28.022 182 104 1 558 712 166 347 2.17e-11 66.6
Msa0044220 MtrunA17_Chr8g0380791 29.134 127 90 0 587 713 61 187 5.76e-12 69.3
Msa0044220 MtrunA17_Chr8g0380791 31.126 151 94 3 525 675 55 195 8.20e-12 68.9
Msa0044220 MtrunA17_Chr4g0059911 35.433 127 82 0 583 709 54 180 6.86e-12 67.8
Msa0044220 MtrunA17_Chr8g0353121 33.333 126 84 0 587 712 78 203 1.58e-11 67.8
Msa0044220 MtrunA17_Chr3g0131001 30.625 160 86 4 578 713 48 206 1.65e-11 67.8
Msa0044220 MtrunA17_Chr7g0256301 32.308 130 82 4 587 713 96 222 1.76e-11 67.8
Msa0044220 MtrunA17_Chr8g0382971 32.031 128 87 0 587 714 27 154 2.88e-11 65.9
Msa0044220 MtrunA17_Chr3g0082501 30.952 126 87 0 587 712 89 214 7.88e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044220 AT1G75010.1 46.210 686 318 7 71 721 69 738 0.0 610
Msa0044220 AT1G60890.2 35.433 127 82 0 587 713 71 197 3.23e-16 83.6
Msa0044220 AT1G60890.1 35.433 127 82 0 587 713 59 185 3.39e-16 83.2
Msa0044220 AT2G26420.2 30.994 171 113 2 549 714 12 182 7.43e-15 79.0
Msa0044220 AT2G26420.3 30.994 171 113 2 549 714 12 182 7.43e-15 79.0
Msa0044220 AT2G26420.1 30.994 171 113 2 549 714 12 182 1.02e-14 78.6
Msa0044220 AT1G21980.1 27.027 185 106 3 558 713 43 227 2.95e-14 77.0
Msa0044220 AT1G77740.2 30.061 163 109 2 561 720 52 212 2.73e-13 73.9
Msa0044220 AT1G77740.2 31.496 127 87 0 587 713 102 228 2.01e-12 71.2
Msa0044220 AT1G77740.1 30.061 163 109 2 561 720 52 212 2.73e-13 73.9
Msa0044220 AT1G77740.1 31.496 127 87 0 587 713 102 228 2.01e-12 71.2
Msa0044220 AT3G07960.1 30.667 150 81 2 587 713 29 178 3.07e-13 73.9
Msa0044220 AT4G17080.1 29.851 134 94 0 581 714 299 432 4.68e-13 72.8
Msa0044220 AT4G17080.1 30.400 125 87 0 588 712 283 407 5.00e-11 66.2
Msa0044220 AT3G07960.3 30.667 150 81 2 587 713 29 178 6.23e-13 72.8
Msa0044220 AT1G10900.2 30.709 127 88 0 587 713 59 185 6.91e-13 72.8
Msa0044220 AT1G10900.1 30.709 127 88 0 587 713 59 185 6.91e-13 72.8
Msa0044220 AT1G10900.3 30.709 127 88 0 587 713 59 185 6.91e-13 72.8
Msa0044220 AT3G07960.2 30.667 150 81 2 587 713 29 178 7.44e-13 72.4
Msa0044220 AT3G07960.4 30.667 150 81 2 587 713 29 178 7.44e-13 72.4
Msa0044220 AT2G35170.1 29.851 134 94 0 581 714 268 401 3.01e-12 70.1
Msa0044220 AT3G09920.3 25.828 151 89 1 587 714 55 205 8.93e-11 65.9
Msa0044220 AT3G09920.4 25.828 151 89 1 587 714 55 205 8.93e-11 65.9
Msa0044220 AT3G09920.2 25.828 151 89 1 587 714 55 205 8.93e-11 65.9
Msa0044220 AT3G09920.1 25.828 151 89 1 587 714 55 205 8.93e-11 65.9

Find 175 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCATCAGCTTCCCTTTCT+TGG 0.160785 1_1:-75725091 None:intergenic
TGAATAGGTACACTGAAATT+TGG 0.182648 1_1:+75727839 Msa0044220:intron
TATATTTGATTGTCCTTTCC+TGG 0.194395 1_1:+75723015 Msa0044220:CDS
GAGAATACTAATTTACTTAT+TGG 0.199862 1_1:+75721329 Msa0044220:CDS
GAAATATCTATGATGGTTTA+TGG 0.235774 1_1:+75725943 Msa0044220:CDS
ATGCATATGACTGCACTATT+TGG 0.239687 1_1:-75723300 None:intergenic
CTTCTTCGTCACTGCCATTA+TGG 0.243673 1_1:+75719802 Msa0044220:CDS
AGGAAAATGCAGGGCAAGTT+TGG 0.247568 1_1:-75724502 None:intergenic
TTTAATAATTTCTGAATTGC+AGG 0.270512 1_1:-75722792 None:intergenic
GACAGAACACCGTGCTTCTT+TGG 0.282395 1_1:-75725296 None:intergenic
CTTAACCCTTCAAAGCTAAA+AGG 0.285883 1_1:-75720970 None:intergenic
TCCTAATGGCTTTGTATAAT+AGG 0.293854 1_1:+75728082 Msa0044220:three_prime_UTR
ATCGGTGGTTTGCAAACTTC+TGG 0.294923 1_1:+75726342 Msa0044220:CDS
AGCTGTCTTCTCTGCGCTTT+TGG 0.295123 1_1:+75720016 Msa0044220:CDS
AAAATTACCTTCTTCATTAA+CGG 0.298913 1_1:-75724891 None:intergenic
AAGAAGCCAGAATTGGATTT+GGG 0.299412 1_1:+75722957 Msa0044220:CDS
AACCAGGGGCGTCTTGTTCT+TGG 0.303924 1_1:+75725915 Msa0044220:intron
AAGTCTGGTGATGCCTTCTT+TGG 0.305312 1_1:+75726401 Msa0044220:CDS
AAAGAAGCCAGAATTGGATT+TGG 0.312541 1_1:+75722956 Msa0044220:CDS
AGTGGGGCTTTGACGATTCC+TGG 0.320062 1_1:-75720458 None:intergenic
TTTCCTGGGTGTTTCTTTGA+AGG 0.320867 1_1:+75723030 Msa0044220:CDS
CGCAGAGAAGACAGCTGAAA+TGG 0.336689 1_1:-75720009 None:intergenic
ATCATCAGCTTCCCTTTCTT+GGG 0.346872 1_1:-75725090 None:intergenic
TTCTTGAAATAGAATGTTCC+TGG 0.349806 1_1:-75725987 None:intergenic
GCAGCTTGGAAACTGGAATC+TGG 0.352297 1_1:+75725037 Msa0044220:CDS
TGTTGTGGAAATACAATATA+GGG 0.352525 1_1:+75725725 Msa0044220:CDS
CTAGGGAGCAGCTTGGAAAC+TGG 0.352578 1_1:+75725030 Msa0044220:CDS
TGCTATATCACTATCATTGA+TGG 0.371386 1_1:-75723340 None:intergenic
AGCAGCCCCAAATCCAATTC+TGG 0.372964 1_1:-75722963 None:intergenic
CTGTTGTGGAAATACAATAT+AGG 0.375868 1_1:+75725724 Msa0044220:CDS
TTCTCAGGTAAAAGCTTTGA+TGG 0.377982 1_1:+75721295 Msa0044220:intron
TCTTCATTAACGGATTCATA+AGG 0.378330 1_1:-75724881 None:intergenic
GCTCAAAGTTGTCTGCTTCA+AGG 0.379579 1_1:+75724715 Msa0044220:CDS
GCTAAAAGGCTTCAAAACTA+TGG 0.380131 1_1:-75720956 None:intergenic
AGTCAGCAACAAACTGTCTC+TGG 0.381755 1_1:+75724552 Msa0044220:CDS
TGTTATAAAGAAGCCAGAAT+TGG 0.388043 1_1:+75722950 Msa0044220:CDS
GAATAGGTACACTGAAATTT+GGG 0.392508 1_1:+75727840 Msa0044220:intron
TAACAATTTACCTTCCCTTC+AGG 0.393081 1_1:-75725783 None:intergenic
ATTCAAGGTGAAATTAGAAA+TGG 0.394932 1_1:-75719734 None:intergenic
TTGAAATTGAAATTGATTCA+AGG 0.396028 1_1:-75719749 None:intergenic
TGCAATGACTTCAACCAAAT+CGG 0.396115 1_1:-75719941 None:intergenic
GAAATTAGAAATGGCTTTGA+AGG 0.397619 1_1:-75719725 None:intergenic
TCGTGTATTCTGTTGTTTGA+CGG 0.402618 1_1:-75723380 None:intergenic
AGCTTTGATGGGGAAACTTA+AGG 0.404513 1_1:+75721307 Msa0044220:CDS
AGAAGAAGCGAAATCCGATT+TGG 0.405146 1_1:+75719927 Msa0044220:CDS
ATATTTGATTGTCCTTTCCT+GGG 0.406458 1_1:+75723016 Msa0044220:CDS
CTTCCTTAGGTGGCTAGTGC+AGG 0.407971 1_1:+75720862 Msa0044220:intron
TTGGTTGAAGTCATTGCAAT+TGG 0.411903 1_1:+75719946 Msa0044220:CDS
CTTCATTAACGGATTCATAA+GGG 0.412878 1_1:-75724880 None:intergenic
GAGCTGTTATTGCTCGTGTT+TGG 0.413127 1_1:-75724696 None:intergenic
GAGATCTTATAACGTTGATA+AGG 0.414385 1_1:+75724608 Msa0044220:CDS
GGAACATTCTATTTCAAGAA+TGG 0.415848 1_1:+75725990 Msa0044220:CDS
AGTAGGTTGGGCTCGACATC+AGG 0.417739 1_1:-75723432 None:intergenic
AGATCTTATAACGTTGATAA+GGG 0.421092 1_1:+75724609 Msa0044220:CDS
CTATATTGTATTTCCACAAC+AGG 0.424847 1_1:-75725723 None:intergenic
GTATAATAGGTGTTTATTGT+GGG 0.432689 1_1:+75728095 Msa0044220:three_prime_UTR
AAGAATGGAGATATGTTTCA+AGG 0.440013 1_1:+75726005 Msa0044220:CDS
TAGGTGGCTAGTGCAGGATA+TGG 0.445358 1_1:+75720868 Msa0044220:intron
GTCTTTGAAATTGCCAAAGA+AGG 0.449174 1_1:-75726414 None:intergenic
TGTATAATAGGTGTTTATTG+TGG 0.449285 1_1:+75728094 Msa0044220:three_prime_UTR
CAAAAGAGTGGGCCCAAGAA+AGG 0.452782 1_1:+75725078 Msa0044220:CDS
TTCTGGAAGGGAAAGGCAAA+TGG 0.454145 1_1:+75726359 Msa0044220:CDS
TGGCACAGCGGCAAGAGATC+AGG 0.458775 1_1:+75725963 Msa0044220:CDS
CAGTTTCCAAGCTGCTCCCT+AGG 0.460619 1_1:-75725029 None:intergenic
ATAAGGGATAGGACAATTAG+AGG 0.460878 1_1:-75724864 None:intergenic
AACCTCTAGACCGATCCTAA+TGG 0.464637 1_1:+75728068 Msa0044220:three_prime_UTR
GGCAATTGTGAGTCCGTTTG+TGG 0.465780 1_1:-75720935 None:intergenic
AAGATACTTACCTAAGTGTA+AGG 0.466797 1_1:-75723467 None:intergenic
GGTCTAGAGGTTAGAGGCTG+AGG 0.467719 1_1:-75728057 None:intergenic
GAGCACGACTTCATAAATAG+TGG 0.468451 1_1:-75720476 None:intergenic
GGGCGTCTTGTTCTTGGAGA+TGG 0.473196 1_1:+75725921 Msa0044220:CDS
AGCATATTCCACCTTCCTGT+TGG 0.473885 1_1:+75725134 Msa0044220:CDS
GGAGATGGAAATATCTATGA+TGG 0.474755 1_1:+75725936 Msa0044220:CDS
GATTGTGACGAAATCCATAA+TGG 0.476709 1_1:-75719816 None:intergenic
AGAAATGGCTTTGAAGGCTG+TGG 0.477808 1_1:-75719719 None:intergenic
TACAGCGGCGGAATTGATAT+CGG 0.484499 1_1:+75719904 Msa0044220:intron
ACCTATTATACAAAGCCATT+AGG 0.489564 1_1:-75728083 None:intergenic
AGGATCGGTCTAGAGGTTAG+AGG 0.490600 1_1:-75728063 None:intergenic
TATGAATCCGTTAATGAAGA+AGG 0.494377 1_1:+75724884 Msa0044220:CDS
GACAGTCGTGATCAGTAGGT+TGG 0.494454 1_1:-75723445 None:intergenic
CATTGCAATTGGCGGTAGAA+AGG 0.494720 1_1:+75719957 Msa0044220:CDS
TCTCAGGTAAAAGCTTTGAT+GGG 0.495980 1_1:+75721296 Msa0044220:intron
TTCTTTGGCAATTTCAAAGA+CGG 0.496112 1_1:+75726416 Msa0044220:CDS
CAGCTTGGAAACTGGAATCT+GGG 0.497400 1_1:+75725038 Msa0044220:CDS
ACAAACTGTCTCTGGGAAAG+AGG 0.503277 1_1:+75724560 Msa0044220:CDS
GTGGGGCTTTGACGATTCCT+GGG 0.506556 1_1:-75720457 None:intergenic
GGAAACTGGAATCTGGGCCC+TGG 0.507776 1_1:+75725044 Msa0044220:CDS
TGACAAACACTGCGCAGAGT+TGG 0.508108 1_1:+75724671 Msa0044220:CDS
ATGCTTAGATTATCCACCAT+TGG 0.509193 1_1:-75725116 None:intergenic
GCCAAGGTGGTCTGCCTGAA+GGG 0.513027 1_1:+75725769 Msa0044220:CDS
GGCAGGTGTGGAAGCAGTGA+TGG 0.515489 1_1:+75725226 Msa0044220:intron
AGCACGACTTCATAAATAGT+GGG 0.518051 1_1:-75720475 None:intergenic
GCTTTGACGATTCCTGGGGA+AGG 0.519897 1_1:-75720452 None:intergenic
ACAGTCGTGATCAGTAGGTT+GGG 0.522663 1_1:-75723444 None:intergenic
GTTGAAGTCATTGCAATTGG+CGG 0.525641 1_1:+75719949 Msa0044220:CDS
ATCTCTGCAGAACCTTCCCC+AGG 0.527558 1_1:+75720440 Msa0044220:intron
AAGGGAAAGGCAAATGGAGA+GGG 0.532264 1_1:+75726365 Msa0044220:CDS
CAACAGAGGTCTACTAAACA+AGG 0.532845 1_1:+75720176 Msa0044220:CDS
AAAAGAGTGGGCCCAAGAAA+GGG 0.535989 1_1:+75725079 Msa0044220:CDS
AGGGAAAGGCAAATGGAGAG+GGG 0.536953 1_1:+75726366 Msa0044220:CDS
TGGATAGTATACCACCACTC+TGG 0.537473 1_1:-75724482 None:intergenic
TGTTCGTGCAGCATCTATGC+TGG 0.537748 1_1:+75725319 Msa0044220:CDS
GTTTAGACAGATGACTAAGC+TGG 0.543408 1_1:+75727890 Msa0044220:exon
TTAACGGATTCATAAGGGAT+AGG 0.544925 1_1:-75724875 None:intergenic
GGTAGTATACATAACGTCCT+AGG 0.546472 1_1:-75728036 None:intergenic
GTCAGCAACAAACTGTCTCT+GGG 0.548258 1_1:+75724553 Msa0044220:CDS
TGCCAAGGTGGTCTGCCTGA+AGG 0.548874 1_1:+75725768 Msa0044220:CDS
GAAACTGTAAGGTCCACAAA+CGG 0.552096 1_1:+75720922 Msa0044220:CDS
CTTTGTATGTTGTATAATAG+CGG 0.556147 1_1:+75727978 Msa0044220:three_prime_UTR
GCTATATCACTATCATTGAT+GGG 0.557581 1_1:-75723339 None:intergenic
GGATAGTATACCACCACTCT+GGG 0.558036 1_1:-75724481 None:intergenic
AGGTGGTCTGCCTGAAGGGA+AGG 0.558342 1_1:+75725773 Msa0044220:CDS
TTCAAAGACGGATGGCGGCA+TGG 0.564291 1_1:+75726428 Msa0044220:CDS
CACATTGTGATGTGTAGAAA+CGG 0.566826 1_1:-75719850 None:intergenic
TGGTTTGCAAACTTCTGGAA+GGG 0.569915 1_1:+75726347 Msa0044220:CDS
TTGGCAATTTCAAAGACGGA+TGG 0.570378 1_1:+75726420 Msa0044220:CDS
TACACTGAAATTTGGGATCA+CGG 0.572724 1_1:+75727847 Msa0044220:CDS
GCAATTTCAAAGACGGATGG+CGG 0.577985 1_1:+75726423 Msa0044220:CDS
ACTCTGGGAAGGTTGTTGTA+CGG 0.578741 1_1:-75724466 None:intergenic
TGCAAACTTCTGGAAGGGAA+AGG 0.579004 1_1:+75726352 Msa0044220:CDS
TAAGGACAGTCGTGATCAGT+AGG 0.582500 1_1:-75723449 None:intergenic
GTGGTTTGCAAACTTCTGGA+AGG 0.583196 1_1:+75726346 Msa0044220:CDS
AGCTGATGATACACCAATGG+TGG 0.587823 1_1:+75725103 Msa0044220:CDS
CTCAGGTAAAAGCTTTGATG+GGG 0.588289 1_1:+75721297 Msa0044220:intron
TCACGACTGTCCTTACACTT+AGG 0.588645 1_1:+75723457 Msa0044220:CDS
AACAAAGTGGAGTCCTGTTG+TGG 0.594201 1_1:+75725710 Msa0044220:CDS
TCCCTTCAGGCAGACCACCT+TGG 0.595487 1_1:-75725770 None:intergenic
ATCTTATAACGTTGATAAGG+GGG 0.598467 1_1:+75724611 Msa0044220:CDS
AGATACAAGGGACGATGCCA+AGG 0.599966 1_1:+75725753 Msa0044220:CDS
GAGATATGTTTCAAGGATCG+TGG 0.601230 1_1:+75726012 Msa0044220:CDS
GATCTTATAACGTTGATAAG+GGG 0.602409 1_1:+75724610 Msa0044220:CDS
AGCGGCAAGAGATCAGGTCC+AGG 0.603757 1_1:+75725969 Msa0044220:CDS
GATTTGAAGTGGCAAAAGAG+TGG 0.603772 1_1:+75725066 Msa0044220:CDS
TTCAAAGAAACACCCAGGAA+AGG 0.604072 1_1:-75723028 None:intergenic
TTATACAAAGCCATTAGGAT+CGG 0.612198 1_1:-75728078 None:intergenic
GAAGGGAAAGGCAAATGGAG+AGG 0.613049 1_1:+75726364 Msa0044220:CDS
AGCCATTAGGATCGGTCTAG+AGG 0.613884 1_1:-75728070 None:intergenic
ATTTGAAGTGGCAAAAGAGT+GGG 0.615548 1_1:+75725067 Msa0044220:CDS
ATATAGGGGAGGAAGATACA+AGG 0.618509 1_1:+75725740 Msa0044220:CDS
TCTGGGCCCTGGATTTGAAG+TGG 0.618907 1_1:+75725055 Msa0044220:CDS
GGATGATGTCATGCACGGCA+AGG 0.621090 1_1:+75726037 Msa0044220:CDS
GAAATGGCTTTGAAGGCTGT+GGG 0.624043 1_1:-75719718 None:intergenic
AACGTGATTTGTCAACAAAG+TGG 0.625546 1_1:+75725697 Msa0044220:CDS
GTGTGAATGCAAATGGAGAG+AGG 0.626401 1_1:+75726462 Msa0044220:CDS
GCCTCACACCAACAGGAAGG+TGG 0.629056 1_1:-75725142 None:intergenic
AGAAGCCAGAATTGGATTTG+GGG 0.631126 1_1:+75722958 Msa0044220:CDS
TGGAGGGATGATGTCATGCA+CGG 0.631513 1_1:+75726032 Msa0044220:CDS
GTTGTGGAAATACAATATAG+GGG 0.640990 1_1:+75725726 Msa0044220:CDS
AGTATACCACCACTCTGGGA+AGG 0.644388 1_1:-75724477 None:intergenic
AGGCAAGGAAGTTTGAACCT+AGG 0.644931 1_1:+75728019 Msa0044220:three_prime_UTR
AGACTTGTTGACTCTAGATG+AGG 0.648376 1_1:+75722570 Msa0044220:CDS
TATGTTTCAAGGATCGTGGA+GGG 0.652467 1_1:+75726016 Msa0044220:CDS
GGAAGCTGATGATACACCAA+TGG 0.657220 1_1:+75725100 Msa0044220:CDS
AGTAACAAACCAAAGAAGCA+CGG 0.658630 1_1:+75725287 Msa0044220:CDS
ATGACTAAGCTGGATAAATG+TGG 0.659330 1_1:+75727900 Msa0044220:exon
TCTACACATCACAATGTGCA+CGG 0.659684 1_1:+75719855 Msa0044220:CDS
AGGGTTAAGACGAAAAGATG+AGG 0.662671 1_1:+75720984 Msa0044220:CDS
GAATGTACAAACAAGGACAA+TGG 0.663850 1_1:-75720504 None:intergenic
AAGGCCTCACACCAACAGGA+AGG 0.668342 1_1:-75725145 None:intergenic
GTGGAAATACAATATAGGGG+AGG 0.668898 1_1:+75725729 Msa0044220:CDS
AAATATCAAAAGCGACAGTG+TGG 0.674008 1_1:-75720897 None:intergenic
TGGGGCTTTGACGATTCCTG+GGG 0.674157 1_1:-75720456 None:intergenic
GTCAAACAACAGAATACACG+AGG 0.682365 1_1:+75723382 Msa0044220:CDS
GCACGACTTCATAAATAGTG+GGG 0.684283 1_1:-75720474 None:intergenic
AAGAAGCACAATTACAACAG+AGG 0.686634 1_1:+75720162 Msa0044220:CDS
CAACAACCTTCCCAGAGTGG+TGG 0.686943 1_1:+75724471 Msa0044220:CDS
ATATGTTTCAAGGATCGTGG+AGG 0.691184 1_1:+75726015 Msa0044220:CDS
TACAAGGGACGATGCCAAGG+TGG 0.695745 1_1:+75725756 Msa0044220:CDS
GAAAGGCAAATGGAGAGGGG+CGG 0.715092 1_1:+75726369 Msa0044220:CDS
TATAGGGGAGGAAGATACAA+GGG 0.718321 1_1:+75725741 Msa0044220:CDS
GTACAACAACCTTCCCAGAG+TGG 0.725672 1_1:+75724468 Msa0044220:CDS
ATACCTTCAAAGAAACACCC+AGG 0.745843 1_1:-75723033 None:intergenic
TATGATGGTTTATGGCACAG+CGG 0.781523 1_1:+75725951 Msa0044220:CDS
ACACATCACAATGTGCACGG+AGG 0.784389 1_1:+75719858 Msa0044220:CDS
TCAAACAACAGAATACACGA+GGG 0.791232 1_1:+75723383 Msa0044220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAGTAAAAAATATTAAGA+TGG - chr1_1:75721189-75721208 None:intergenic 10.0%
!!! AATATTTTTTACTTAATGAT+TGG + chr1_1:75721193-75721212 Msa0044220:intron 10.0%
!!! ATTGATTTTTATCTAATAAT+TGG - chr1_1:75722053-75722072 None:intergenic 10.0%
!!! ATTATTCTACTTTATTTTTA+AGG + chr1_1:75728125-75728144 Msa0044220:three_prime_UTR 10.0%
!!! AGAATAAAATATCTTTTCTA+CGG - chr1_1:75720686-75720705 None:intergenic 15.0%
!! AAAACATAATTGATTAAACA+AGG - chr1_1:75721227-75721246 None:intergenic 15.0%
!! ATGATTAAAAACTTCATTAA+AGG + chr1_1:75721413-75721432 Msa0044220:intron 15.0%
!!! CAATTTTTTGTACATATTTT+AGG + chr1_1:75722069-75722088 Msa0044220:intron 15.0%
!!! TTATTTATTTTTAAGAATGC+AGG - chr1_1:75722222-75722241 None:intergenic 15.0%
!!! AAAAAGTTATCTAAAACAAA+TGG - chr1_1:75723189-75723208 None:intergenic 15.0%
!!! GCAATTATAATTTTATACAA+TGG - chr1_1:75723264-75723283 None:intergenic 15.0%
!!! AATCTTTTATCTATAATACT+GGG - chr1_1:75724651-75724670 None:intergenic 15.0%
!!! AAATCTTTTATCTATAATAC+TGG - chr1_1:75724652-75724671 None:intergenic 15.0%
!!! AAAATTTGTTTAAAAAAGGA+AGG - chr1_1:75724793-75724812 None:intergenic 15.0%
!!! GGATAAAATTTGTTTAAAAA+AGG - chr1_1:75724797-75724816 None:intergenic 15.0%
!!! TTCGTATAAATAATTTTACT+TGG + chr1_1:75726927-75726946 Msa0044220:intron 15.0%
!!! TATAAATAATTTTACTTGGT+AGG + chr1_1:75726931-75726950 Msa0044220:intron 15.0%
!!! TTGAGGTAATTTTATTATTT+TGG + chr1_1:75727188-75727207 Msa0044220:intron 15.0%
!!! ACTATTAACCATTATTTTTT+GGG + chr1_1:75727717-75727736 Msa0044220:intron 15.0%
!!! AAATTTTACCCAAAAAATAA+TGG - chr1_1:75727728-75727747 None:intergenic 15.0%
!!! TTATTTTTTGGGTAAAATTT+CGG + chr1_1:75727728-75727747 Msa0044220:intron 15.0%
!!! TTGAAATTGAAATTGATTCA+AGG - chr1_1:75719752-75719771 None:intergenic 20.0%
!! TAAATAAGTGAAGAAAAACA+GGG + chr1_1:75720331-75720350 Msa0044220:intron 20.0%
!!! TTGATATTTTTGAAACTGTA+AGG + chr1_1:75720911-75720930 Msa0044220:CDS 20.0%
!!! GATTTATTTTGTTACTGTAA+TGG + chr1_1:75721026-75721045 Msa0044220:intron 20.0%
!! GAGAATACTAATTTACTTAT+TGG + chr1_1:75721329-75721348 Msa0044220:CDS 20.0%
!! AAGAAAAAGTTGCAAAAATA+TGG - chr1_1:75721366-75721385 None:intergenic 20.0%
!! TAATGCGTTTGATAAAAATA+TGG + chr1_1:75721645-75721664 Msa0044220:intron 20.0%
!! AAATACCCTTATAAATTTCA+TGG + chr1_1:75721916-75721935 Msa0044220:intron 20.0%
!! TTTAGCCATGAAATTTATAA+GGG - chr1_1:75721924-75721943 None:intergenic 20.0%
!! ATTTAGCCATGAAATTTATA+AGG - chr1_1:75721925-75721944 None:intergenic 20.0%
!!! CAAATTTTCAAACTTTTTGT+AGG - chr1_1:75722497-75722516 None:intergenic 20.0%
!! GTTTGTGTAAAAATATCATA+TGG + chr1_1:75722690-75722709 Msa0044220:intron 20.0%
!! TTTAATAATTTCTGAATTGC+AGG - chr1_1:75722795-75722814 None:intergenic 20.0%
!! AAGAAAGATATAAACAAACA+GGG - chr1_1:75722856-75722875 None:intergenic 20.0%
!! GTTTATATCTTTCTTGAAAT+AGG + chr1_1:75722861-75722880 Msa0044220:intron 20.0%
!!! TGATTTTAAATCGATAAAAC+TGG + chr1_1:75723938-75723957 Msa0044220:intron 20.0%
!!! TGAATGACAATTATTTTCAA+AGG - chr1_1:75724269-75724288 None:intergenic 20.0%
!!! TTCTTGATTTGTTAAGTATT+AGG + chr1_1:75724383-75724402 Msa0044220:intron 20.0%
!!! TCTTGATTTGTTAAGTATTA+GGG + chr1_1:75724384-75724403 Msa0044220:intron 20.0%
!! AAAATTACCTTCTTCATTAA+CGG - chr1_1:75724894-75724913 None:intergenic 20.0%
!!! ATTTACATCTTCATTTTTGA+AGG + chr1_1:75725250-75725269 Msa0044220:CDS 20.0%
!! GTCAGTATTATTAATGATAT+TGG + chr1_1:75725414-75725433 Msa0044220:intron 20.0%
!! AGTATTATTAATGATATTGG+TGG + chr1_1:75725417-75725436 Msa0044220:intron 20.0%
!! GTATTATTAATGATATTGGT+GGG + chr1_1:75725418-75725437 Msa0044220:intron 20.0%
!! GTTCTTTATACTAAGAATAA+AGG + chr1_1:75725497-75725516 Msa0044220:intron 20.0%
!! TAAACTTTAACAAATCTCAA+TGG - chr1_1:75725539-75725558 None:intergenic 20.0%
!! AAGTTTAATTGTAAAGTAGT+AGG + chr1_1:75725552-75725571 Msa0044220:intron 20.0%
!! TTGAAAATATATTGTAATCC+AGG + chr1_1:75725630-75725649 Msa0044220:intron 20.0%
!!! AAAAAGAGGAAAAAGAATTT+TGG - chr1_1:75725849-75725868 None:intergenic 20.0%
!!! AATTCTTTTTCCTCTTTTTT+TGG + chr1_1:75725850-75725869 Msa0044220:intron 20.0%
!!! TAATTTTATTATTTTGGTCC+AGG + chr1_1:75727194-75727213 Msa0044220:intron 20.0%
!! AAGACGACAAATATAAAATT+AGG + chr1_1:75727231-75727250 Msa0044220:intron 20.0%
!! AAACATCAATTAATCAACAA+AGG - chr1_1:75727428-75727447 None:intergenic 20.0%
!!! TTTGTTGATTAATTGATGTT+TGG + chr1_1:75727427-75727446 Msa0044220:intron 20.0%
!!! TTGTTGATTAATTGATGTTT+GGG + chr1_1:75727428-75727447 Msa0044220:intron 20.0%
!!! AACATTTTGACATTTCAAAT+TGG - chr1_1:75727615-75727634 None:intergenic 20.0%
!!! AACTTTTCAAACTTTACAAT+TGG + chr1_1:75727643-75727662 Msa0044220:intron 20.0%
!!! GACTATTAACCATTATTTTT+TGG + chr1_1:75727716-75727735 Msa0044220:intron 20.0%
!!! ACAGTAATAATCACAATTTT+AGG - chr1_1:75727928-75727947 None:intergenic 20.0%
! ATTCAAGGTGAAATTAGAAA+TGG - chr1_1:75719737-75719756 None:intergenic 25.0%
! TACATAATGAATCTGTATTC+TGG - chr1_1:75720287-75720306 None:intergenic 25.0%
! GTAAATAAGTGAAGAAAAAC+AGG + chr1_1:75720330-75720349 Msa0044220:intron 25.0%
! AAATAAGTGAAGAAAAACAG+GGG + chr1_1:75720332-75720351 Msa0044220:intron 25.0%
! CAAAATCTCTGTTTCAATAT+TGG + chr1_1:75720548-75720567 Msa0044220:intron 25.0%
! TCTATTCAACTGAAATTCTT+AGG + chr1_1:75720703-75720722 Msa0044220:intron 25.0%
! AATAAGAGAAACTATCAAGA+AGG + chr1_1:75721612-75721631 Msa0044220:intron 25.0%
! TGGTTTATGATAAAACACTA+TGG + chr1_1:75721665-75721684 Msa0044220:intron 25.0%
! ATACTTGTCAATCTGATATT+TGG + chr1_1:75721779-75721798 Msa0044220:intron 25.0%
!! ATCATAGAAAGTATGAGAAT+TGG + chr1_1:75721982-75722001 Msa0044220:intron 25.0%
!! TCATAGAAAGTATGAGAATT+GGG + chr1_1:75721983-75722002 Msa0044220:intron 25.0%
! ATTGGTTACTTCATACTTAT+AGG - chr1_1:75722035-75722054 None:intergenic 25.0%
! TGCTTGTAATGCAAAAAAAA+AGG + chr1_1:75722274-75722293 Msa0044220:intron 25.0%
! ATTTCTATCATTGGGATTAA+GGG + chr1_1:75722368-75722387 Msa0044220:intron 25.0%
!! CTTTTATCAGTTTAATTGAC+TGG - chr1_1:75722419-75722438 None:intergenic 25.0%
!!! TACAGATTTTAGAACAGATA+TGG - chr1_1:75722638-75722657 None:intergenic 25.0%
! TATGGTTAAAGACTTATAGA+TGG + chr1_1:75722708-75722727 Msa0044220:intron 25.0%
!! TTATAGATGGAATGTTTTAC+AGG + chr1_1:75722721-75722740 Msa0044220:intron 25.0%
! CAAGAAAGATATAAACAAAC+AGG - chr1_1:75722857-75722876 None:intergenic 25.0%
! ATATCTGTAAATAGTAAGAC+AGG - chr1_1:75722925-75722944 None:intergenic 25.0%
! GTCTTACTATTTACAGATAT+TGG + chr1_1:75722925-75722944 Msa0044220:intron 25.0%
! AAAGTGTGAAAATTTAAGCT+AGG - chr1_1:75723061-75723080 None:intergenic 25.0%
!! ATTTTATACAATGGAAGAGA+AGG - chr1_1:75723255-75723274 None:intergenic 25.0%
!!! TATAATTGCCATGTTTTTTC+AGG + chr1_1:75723275-75723294 Msa0044220:intron 25.0%
!!! TGAAGCTCGTATTTTTTTTT+TGG - chr1_1:75723798-75723817 None:intergenic 25.0%
! TAAGTGATTGACAATATACA+AGG + chr1_1:75724038-75724057 Msa0044220:intron 25.0%
!!! TAATGTAAGAGTGTTTAGAT+AGG + chr1_1:75724076-75724095 Msa0044220:intron 25.0%
!!! CTTGATTTGTTAAGTATTAG+GGG + chr1_1:75724385-75724404 Msa0044220:intron 25.0%
!! AGATCTTATAACGTTGATAA+GGG + chr1_1:75724609-75724628 Msa0044220:CDS 25.0%
!!! GGATAATTATTTTTCTGTGT+TGG + chr1_1:75724921-75724940 Msa0044220:intron 25.0%
! AAAATATATTGTAATCCAGG+TGG + chr1_1:75725633-75725652 Msa0044220:intron 25.0%
!! AGGTTTGACTTTATATTTAC+AGG + chr1_1:75725668-75725687 Msa0044220:intron 25.0%
!! TTTGACTTTATATTTACAGG+AGG + chr1_1:75725671-75725690 Msa0044220:intron 25.0%
! TGTTGTGGAAATACAATATA+GGG + chr1_1:75725725-75725744 Msa0044220:CDS 25.0%
! TTAAATGAAAATCTACAACC+AGG + chr1_1:75725899-75725918 Msa0044220:intron 25.0%
! TAAATGAAAATCTACAACCA+GGG + chr1_1:75725900-75725919 Msa0044220:intron 25.0%
! GAAATATCTATGATGGTTTA+TGG + chr1_1:75725943-75725962 Msa0044220:CDS 25.0%
!!! TACCGTTTTAAATTTAACTC+TGG + chr1_1:75726064-75726083 Msa0044220:intron 25.0%
! GACCAGAGTTAAATTTAAAA+CGG - chr1_1:75726069-75726088 None:intergenic 25.0%
! ATGATGCTTATCAATTATGT+AGG + chr1_1:75726295-75726314 Msa0044220:intron 25.0%
! TGATGCTTATCAATTATGTA+GGG + chr1_1:75726296-75726315 Msa0044220:intron 25.0%
!!! TTTTTTTGTGTGAATGCAAA+TGG + chr1_1:75726455-75726474 Msa0044220:CDS 25.0%
! AATACACATGTGAACAAAAA+GGG - chr1_1:75726710-75726729 None:intergenic 25.0%
! TAATACACATGTGAACAAAA+AGG - chr1_1:75726711-75726730 None:intergenic 25.0%
! TAACAGAAAGAAGACTTAAA+CGG - chr1_1:75726784-75726803 None:intergenic 25.0%
!! AGTAGTAAAGATTGATGATA+TGG + chr1_1:75727002-75727021 Msa0044220:intron 25.0%
!! TTTTATATTTGTCGTCTTGA+TGG - chr1_1:75727229-75727248 None:intergenic 25.0%
! TCACGTAGAATATTAACAAA+AGG + chr1_1:75727330-75727349 Msa0044220:intron 25.0%
! CACGTAGAATATTAACAAAA+GGG + chr1_1:75727331-75727350 Msa0044220:intron 25.0%
! GTTAAAACTTGGATAAAGAT+AGG + chr1_1:75727397-75727416 Msa0044220:intron 25.0%
! CGCGAAGTATAATTAATTAT+GGG - chr1_1:75727523-75727542 None:intergenic 25.0%
! ACGCGAAGTATAATTAATTA+TGG - chr1_1:75727524-75727543 None:intergenic 25.0%
! TAAACACAAGTTTGTAAACA+GGG - chr1_1:75727579-75727598 None:intergenic 25.0%
! TTAAACACAAGTTTGTAAAC+AGG - chr1_1:75727580-75727599 None:intergenic 25.0%
! ACTTTACAATTGGAGTATAT+AGG + chr1_1:75727653-75727672 Msa0044220:intron 25.0%
! CTTTGTATGTTGTATAATAG+CGG + chr1_1:75727978-75727997 Msa0044220:three_prime_UTR 25.0%
! TGTATAATAGGTGTTTATTG+TGG + chr1_1:75728094-75728113 Msa0044220:three_prime_UTR 25.0%
! GTATAATAGGTGTTTATTGT+GGG + chr1_1:75728095-75728114 Msa0044220:three_prime_UTR 25.0%
!! GAAATTAGAAATGGCTTTGA+AGG - chr1_1:75719728-75719747 None:intergenic 30.0%
AATAGCGATTGCATGAAATT+AGG - chr1_1:75720059-75720078 None:intergenic 30.0%
ATTTCATGCAATCGCTATTT+AGG + chr1_1:75720060-75720079 Msa0044220:intron 30.0%
AATAAGTGAAGAAAAACAGG+GGG + chr1_1:75720333-75720352 Msa0044220:intron 30.0%
AACAGTATGTGACATATGAA+TGG - chr1_1:75720396-75720415 None:intergenic 30.0%
! TGTCACATACTGTTGTTTAA+AGG + chr1_1:75720402-75720421 Msa0044220:intron 30.0%
! ATTTTGCTACGAGAGTTTTA+AGG - chr1_1:75720534-75720553 None:intergenic 30.0%
TGGCTGAAAAAATACAACTT+AGG - chr1_1:75720792-75720811 None:intergenic 30.0%
!! CTATCATAGAGATTGTTTTG+AGG - chr1_1:75721067-75721086 None:intergenic 30.0%
! GTTTCTCTTATTGTTTTCCT+AGG - chr1_1:75721604-75721623 None:intergenic 30.0%
TTGTCAATCTGATATTTGGT+AGG + chr1_1:75721783-75721802 Msa0044220:intron 30.0%
TACTTTCTATGATTTCAAGC+TGG - chr1_1:75721975-75721994 None:intergenic 30.0%
GTTACTTCATACTTATAGGA+AGG - chr1_1:75722031-75722050 None:intergenic 30.0%
!!! TTTTTTCAGGCAATATGGAT+CGG - chr1_1:75722143-75722162 None:intergenic 30.0%
!!! TTGAGTTTTTTCAGGCAATA+TGG - chr1_1:75722148-75722167 None:intergenic 30.0%
TCTCAAGTTTATCATGCATA+TGG + chr1_1:75722311-75722330 Msa0044220:intron 30.0%
ATGCATATGGTGACAATAAT+TGG + chr1_1:75722324-75722343 Msa0044220:intron 30.0%
TATGGTGACAATAATTGGAA+AGG + chr1_1:75722329-75722348 Msa0044220:intron 30.0%
TGACAATAATTGGAAAGGTA+TGG + chr1_1:75722334-75722353 Msa0044220:intron 30.0%
! AATTGGAAAGGTATGGTAAT+TGG + chr1_1:75722341-75722360 Msa0044220:intron 30.0%
! ATTGGATGGATTTCTATCAT+TGG + chr1_1:75722359-75722378 Msa0044220:intron 30.0%
! TTGGATGGATTTCTATCATT+GGG + chr1_1:75722360-75722379 Msa0044220:intron 30.0%
GATTTCTATCATTGGGATTA+AGG + chr1_1:75722367-75722386 Msa0044220:intron 30.0%
GTCTCATAAACAACAAAAGT+GGG - chr1_1:75722520-75722539 None:intergenic 30.0%
TGTCTCATAAACAACAAAAG+TGG - chr1_1:75722521-75722540 None:intergenic 30.0%
TATAAACAAACAGGGCTAAT+GGG - chr1_1:75722848-75722867 None:intergenic 30.0%
ATATAAACAAACAGGGCTAA+TGG - chr1_1:75722849-75722868 None:intergenic 30.0%
! AGTGCATTGATAATCAAGTT+TGG - chr1_1:75722888-75722907 None:intergenic 30.0%
TGTTATAAAGAAGCCAGAAT+TGG + chr1_1:75722950-75722969 Msa0044220:CDS 30.0%
TATATTTGATTGTCCTTTCC+TGG + chr1_1:75723015-75723034 Msa0044220:CDS 30.0%
ATATTTGATTGTCCTTTCCT+GGG + chr1_1:75723016-75723035 Msa0044220:CDS 30.0%
! GAGGAAATCATTCTGAAAAA+GGG - chr1_1:75723164-75723183 None:intergenic 30.0%
! AGAGGAAATCATTCTGAAAA+AGG - chr1_1:75723165-75723184 None:intergenic 30.0%
! TTATCTAAAACAAATGGCAG+AGG - chr1_1:75723183-75723202 None:intergenic 30.0%
ATTTGGATCCTGAAAAAACA+TGG - chr1_1:75723286-75723305 None:intergenic 30.0%
GCTATATCACTATCATTGAT+GGG - chr1_1:75723342-75723361 None:intergenic 30.0%
TGCTATATCACTATCATTGA+TGG - chr1_1:75723343-75723362 None:intergenic 30.0%
AAGATACTTACCTAAGTGTA+AGG - chr1_1:75723470-75723489 None:intergenic 30.0%
!!! TTTGTTTTGTTGCAAAGAGA+AGG + chr1_1:75723488-75723507 Msa0044220:intron 30.0%
! TGTCTAATTTTCTGTAGTCT+CGG + chr1_1:75723685-75723704 Msa0044220:intron 30.0%
! AAGTTCAGAAAACTTTTTGC+TGG + chr1_1:75723719-75723738 Msa0044220:intron 30.0%
AAAGCTCGTATTTGACAATA+AGG - chr1_1:75723775-75723794 None:intergenic 30.0%
TTTCTTCCTCATGTTGTATA+CGG + chr1_1:75723820-75723839 Msa0044220:intron 30.0%
AGAAGAAAAAAACTCCATCA+AGG - chr1_1:75723847-75723866 None:intergenic 30.0%
ATATACAAGGATCTGATCAT+TGG + chr1_1:75724051-75724070 Msa0044220:intron 30.0%
!! TAACGTAAGAGTGTTTAGAT+AGG + chr1_1:75724131-75724150 Msa0044220:intron 30.0%
! ACAGACACTTGAAATTCTTT+TGG - chr1_1:75724161-75724180 None:intergenic 30.0%
! AATTTCAAGTGTCTGTTAAG+TGG + chr1_1:75724165-75724184 Msa0044220:intron 30.0%
! GTGTGGTATGTTAATTTTGA+TGG + chr1_1:75724318-75724337 Msa0044220:intron 30.0%
CTGCTATAATCATATGAAGA+GGG - chr1_1:75724441-75724460 None:intergenic 30.0%
AAAAACAAGAGGAAAATGCA+GGG - chr1_1:75724514-75724533 None:intergenic 30.0%
GAGATCTTATAACGTTGATA+AGG + chr1_1:75724608-75724627 Msa0044220:CDS 30.0%
! GATCTTATAACGTTGATAAG+GGG + chr1_1:75724610-75724629 Msa0044220:CDS 30.0%
! ATCTTATAACGTTGATAAGG+GGG + chr1_1:75724611-75724630 Msa0044220:CDS 30.0%
GATAATGAAAGAAGATAGAG+AGG - chr1_1:75724744-75724763 None:intergenic 30.0%
TTTATCCTGTATTACATGAC+AGG + chr1_1:75724810-75724829 Msa0044220:intron 30.0%
TTATCCTGTATTACATGACA+GGG + chr1_1:75724811-75724830 Msa0044220:intron 30.0%
!! CTTCATTAACGGATTCATAA+GGG - chr1_1:75724883-75724902 None:intergenic 30.0%
!! TCTTCATTAACGGATTCATA+AGG - chr1_1:75724884-75724903 None:intergenic 30.0%
TATGAATCCGTTAATGAAGA+AGG + chr1_1:75724884-75724903 Msa0044220:CDS 30.0%
!! AAGAAGGTAATTTTGAGAGA+TGG + chr1_1:75724900-75724919 Msa0044220:intron 30.0%
!! TCATTTTTGAAGGCAAAACA+CGG + chr1_1:75725260-75725279 Msa0044220:CDS 30.0%
TACTAAGAATAAAGGAAGTG+TGG + chr1_1:75725505-75725524 Msa0044220:intron 30.0%
CTATATTGTATTTCCACAAC+AGG - chr1_1:75725726-75725745 None:intergenic 30.0%
CTGTTGTGGAAATACAATAT+AGG + chr1_1:75725724-75725743 Msa0044220:CDS 30.0%
GTTGTGGAAATACAATATAG+GGG + chr1_1:75725726-75725745 Msa0044220:CDS 30.0%
AATTATTCTCTTCAGCTTGT+TGG - chr1_1:75725876-75725895 None:intergenic 30.0%
AAATGAAAATCTACAACCAG+GGG + chr1_1:75725901-75725920 Msa0044220:intron 30.0%
TTCTTGAAATAGAATGTTCC+TGG - chr1_1:75725990-75726009 None:intergenic 30.0%
GGAACATTCTATTTCAAGAA+TGG + chr1_1:75725990-75726009 Msa0044220:CDS 30.0%
AAGAATGGAGATATGTTTCA+AGG + chr1_1:75726005-75726024 Msa0044220:CDS 30.0%
! GTATTGGTACAACATATCAA+CGG - chr1_1:75726138-75726157 None:intergenic 30.0%
TACAGCAGTAATTTGAGTAT+TGG - chr1_1:75726154-75726173 None:intergenic 30.0%
TTCTAGCAACTGTTATTGTA+TGG + chr1_1:75726182-75726201 Msa0044220:intron 30.0%
TCTAGCAACTGTTATTGTAT+GGG + chr1_1:75726183-75726202 Msa0044220:intron 30.0%
! CGCACATAAATTAGACATTT+TGG - chr1_1:75726228-75726247 None:intergenic 30.0%
TTTGGTAAAACACTAGAAGA+AGG + chr1_1:75726269-75726288 Msa0044220:intron 30.0%
!! TTTATTTTCACACTGGTGAT+CGG + chr1_1:75726324-75726343 Msa0044220:CDS 30.0%
TTCTTTGGCAATTTCAAAGA+CGG + chr1_1:75726416-75726435 Msa0044220:CDS 30.0%
TTGCATTCACACAAAAAAAC+TGG - chr1_1:75726454-75726473 None:intergenic 30.0%
! TTGTTCACATGTGTTTTATG+AGG + chr1_1:75726514-75726533 Msa0044220:intron 30.0%
! TGTTCACATGTGTTTTATGA+GGG + chr1_1:75726515-75726534 Msa0044220:intron 30.0%
AAATTAAAGTTCAGGACTTG+AGG - chr1_1:75726853-75726872 None:intergenic 30.0%
! AGTAAAGATTGATGATATGG+AGG + chr1_1:75727005-75727024 Msa0044220:intron 30.0%
GTTATAGTTGTCTGTAATTG+AGG + chr1_1:75727171-75727190 Msa0044220:intron 30.0%
!!! TATACTTCGCGTTTTTTAAG+AGG + chr1_1:75727532-75727551 Msa0044220:intron 30.0%
AAACACAAGTTTGTAAACAG+GGG - chr1_1:75727578-75727597 None:intergenic 30.0%
TGAATAGGTACACTGAAATT+TGG + chr1_1:75727839-75727858 Msa0044220:intron 30.0%
GAATAGGTACACTGAAATTT+GGG + chr1_1:75727840-75727859 Msa0044220:intron 30.0%
!! GGTATTTTTACATACGATGA+AGG + chr1_1:75727999-75728018 Msa0044220:three_prime_UTR 30.0%
TTATACAAAGCCATTAGGAT+CGG - chr1_1:75728081-75728100 None:intergenic 30.0%
!! TCCTAATGGCTTTGTATAAT+AGG + chr1_1:75728082-75728101 Msa0044220:three_prime_UTR 30.0%
ACCTATTATACAAAGCCATT+AGG - chr1_1:75728086-75728105 None:intergenic 30.0%
GATTGTGACGAAATCCATAA+TGG - chr1_1:75719819-75719838 None:intergenic 35.0%
CACATTGTGATGTGTAGAAA+CGG - chr1_1:75719853-75719872 None:intergenic 35.0%
TGCAATGACTTCAACCAAAT+CGG - chr1_1:75719944-75719963 None:intergenic 35.0%
TTGGTTGAAGTCATTGCAAT+TGG + chr1_1:75719946-75719965 Msa0044220:CDS 35.0%
! AAGAAGCACAATTACAACAG+AGG + chr1_1:75720162-75720181 Msa0044220:CDS 35.0%
!! TGAATCTGTATTCTGGTTTG+AGG - chr1_1:75720280-75720299 None:intergenic 35.0%
AGCACGACTTCATAAATAGT+GGG - chr1_1:75720478-75720497 None:intergenic 35.0%
GAATGTACAAACAAGGACAA+TGG - chr1_1:75720507-75720526 None:intergenic 35.0%
AGGAAAGGAATGTACAAACA+AGG - chr1_1:75720514-75720533 None:intergenic 35.0%
CTACACTTGAGGTAACTTTA+TGG - chr1_1:75720584-75720603 None:intergenic 35.0%
GATAAAGCAAACTACACTTG+AGG - chr1_1:75720595-75720614 None:intergenic 35.0%
AAAGCTGACTGACATGAATT+AGG + chr1_1:75720758-75720777 Msa0044220:intron 35.0%
CTGACATGAATTAGGATGTA+TGG + chr1_1:75720766-75720785 Msa0044220:intron 35.0%
TCGTGAAAGTGGTCTAAATA+TGG + chr1_1:75720816-75720835 Msa0044220:intron 35.0%
AAATATCAAAAGCGACAGTG+TGG - chr1_1:75720900-75720919 None:intergenic 35.0%
GCTAAAAGGCTTCAAAACTA+TGG - chr1_1:75720959-75720978 None:intergenic 35.0%
!!! TTGAAGCCTTTTAGCTTTGA+AGG + chr1_1:75720964-75720983 Msa0044220:CDS 35.0%
!!! TGAAGCCTTTTAGCTTTGAA+GGG + chr1_1:75720965-75720984 Msa0044220:CDS 35.0%
CTTAACCCTTCAAAGCTAAA+AGG - chr1_1:75720973-75720992 None:intergenic 35.0%
TATTCGTGTCATGAATTCTC+AGG + chr1_1:75721280-75721299 Msa0044220:intron 35.0%
! TTCTCAGGTAAAAGCTTTGA+TGG + chr1_1:75721295-75721314 Msa0044220:intron 35.0%
! TCTCAGGTAAAAGCTTTGAT+GGG + chr1_1:75721296-75721315 Msa0044220:intron 35.0%
!!! GCTCAATGTCTTTTTTTGTC+CGG + chr1_1:75721491-75721510 Msa0044220:intron 35.0%
GTCTTCACATATTGTGTTAC+CGG - chr1_1:75721513-75721532 None:intergenic 35.0%
GACCTATGAATTCAGTAGTA+AGG + chr1_1:75721530-75721549 Msa0044220:intron 35.0%
CTCCTTACTACTGAATTCAT+AGG - chr1_1:75721535-75721554 None:intergenic 35.0%
AGTAAGGAGAGTAGATCAAA+TGG + chr1_1:75721546-75721565 Msa0044220:intron 35.0%
ATATTTGGTAGGTGTCAGTT+GGG + chr1_1:75721794-75721813 Msa0044220:intron 35.0%
TATGATGTAGTGAAGAACAG+AGG + chr1_1:75721860-75721879 Msa0044220:intron 35.0%
ATGATGTAGTGAAGAACAGA+GGG + chr1_1:75721861-75721880 Msa0044220:intron 35.0%
TGCCTGAAAAAACTCAAACT+TGG + chr1_1:75722151-75722170 Msa0044220:intron 35.0%
!!! GTCCAAGTTTGAGTTTTTTC+AGG - chr1_1:75722156-75722175 None:intergenic 35.0%
!!! TGCTGTTTTGCTAGCTATTA+TGG + chr1_1:75722612-75722631 Msa0044220:CDS 35.0%
ATAAACAAACAGGGCTAATG+GGG - chr1_1:75722847-75722866 None:intergenic 35.0%
AAAGAAGCCAGAATTGGATT+TGG + chr1_1:75722956-75722975 Msa0044220:CDS 35.0%
AAGAAGCCAGAATTGGATTT+GGG + chr1_1:75722957-75722976 Msa0044220:CDS 35.0%
AAAAGGGTCTACTAGCAATA+TGG - chr1_1:75723148-75723167 None:intergenic 35.0%
ATGCATATGACTGCACTATT+TGG - chr1_1:75723303-75723322 None:intergenic 35.0%
! TCGTGTATTCTGTTGTTTGA+CGG - chr1_1:75723383-75723402 None:intergenic 35.0%
TCAAACAACAGAATACACGA+GGG + chr1_1:75723383-75723402 Msa0044220:CDS 35.0%
TGACTCAAATGTTAAATGCG+TGG + chr1_1:75723658-75723677 Msa0044220:intron 35.0%
TTCTTCCTCATGTTGTATAC+GGG + chr1_1:75723821-75723840 Msa0044220:intron 35.0%
! TTCTTCTGATTTTACGCTTG+TGG + chr1_1:75723863-75723882 Msa0044220:intron 35.0%
!! GGTACTAGATTTTGGAAAAC+AGG + chr1_1:75723967-75723986 Msa0044220:intron 35.0%
TGAAAATCCTGCAGAACTAA+AGG + chr1_1:75723994-75724013 Msa0044220:intron 35.0%
ACTAAAGGTAGTGAAATTGC+TGG + chr1_1:75724009-75724028 Msa0044220:intron 35.0%
! GAAGAATTTCAAGTGTCTGT+TGG + chr1_1:75724106-75724125 Msa0044220:intron 35.0%
GAATGTGTGTGATGATTATG+AGG + chr1_1:75724212-75724231 Msa0044220:intron 35.0%
GCTGCTATAATCATATGAAG+AGG - chr1_1:75724442-75724461 None:intergenic 35.0%
CAAAAACAAGAGGAAAATGC+AGG - chr1_1:75724515-75724534 None:intergenic 35.0%
!!! CTGCATTTTCCTCTTGTTTT+TGG + chr1_1:75724513-75724532 Msa0044220:CDS 35.0%
!!! TTCCTCTTGTTTTTGGCTTT+TGG + chr1_1:75724520-75724539 Msa0044220:CDS 35.0%
!!! TCCTCTTGTTTTTGGCTTTT+GGG + chr1_1:75724521-75724540 Msa0044220:CDS 35.0%
ATAAGGGATAGGACAATTAG+AGG - chr1_1:75724867-75724886 None:intergenic 35.0%
!! TTAACGGATTCATAAGGGAT+AGG - chr1_1:75724878-75724897 None:intergenic 35.0%
TGTTCAAATCAACTTGCACT+AGG + chr1_1:75724993-75725012 Msa0044220:intron 35.0%
! ATTTGAAGTGGCAAAAGAGT+GGG + chr1_1:75725067-75725086 Msa0044220:CDS 35.0%
ATGCTTAGATTATCCACCAT+TGG - chr1_1:75725119-75725138 None:intergenic 35.0%
TAAACAGTCTTTCGACTCTT+CGG - chr1_1:75725171-75725190 None:intergenic 35.0%
! TATGTCAAAAAAGCATGAGC+CGG + chr1_1:75725202-75725221 Msa0044220:intron 35.0%
AGTAACAAACCAAAGAAGCA+CGG + chr1_1:75725287-75725306 Msa0044220:CDS 35.0%
TACAGAATTCATGCGTTTCT+AGG - chr1_1:75725456-75725475 None:intergenic 35.0%
CCTAAAAAATTCTTACCACC+TGG - chr1_1:75725651-75725670 None:intergenic 35.0%
!!! CCAGGTGGTAAGAATTTTTT+AGG + chr1_1:75725648-75725667 Msa0044220:intron 35.0%
! AACGTGATTTGTCAACAAAG+TGG + chr1_1:75725697-75725716 Msa0044220:CDS 35.0%
TAACAATTTACCTTCCCTTC+AGG - chr1_1:75725786-75725805 None:intergenic 35.0%
!!! AAAGAATTTTGGAGTCTAGC+TGG - chr1_1:75725838-75725857 None:intergenic 35.0%
GGAGATGGAAATATCTATGA+TGG + chr1_1:75725936-75725955 Msa0044220:CDS 35.0%
GCTTATCAATTATGTAGGGT+TGG + chr1_1:75726300-75726319 Msa0044220:intron 35.0%
!!! GGTTGGTTTTATTTTCACAC+TGG + chr1_1:75726317-75726336 Msa0044220:CDS 35.0%
!! GTCTTTGAAATTGCCAAAGA+AGG - chr1_1:75726417-75726436 None:intergenic 35.0%
! GTTCACATGTGTTTTATGAG+GGG + chr1_1:75726516-75726535 Msa0044220:intron 35.0%
ACAACTTTACCATTGCATCA+AGG - chr1_1:75726544-75726563 None:intergenic 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr1_1:75726605-75726624 Msa0044220:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr1_1:75726610-75726629 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr1_1:75726610-75726629 Msa0044220:intron 35.0%
GGTGGCTAATATAAGTTGTT+TGG - chr1_1:75726763-75726782 None:intergenic 35.0%
ACATGACATTGACATTTGAG+AGG + chr1_1:75726805-75726824 Msa0044220:intron 35.0%
!! GGAAAAAGAAGTGTTGTTGA+AGG + chr1_1:75726826-75726845 Msa0044220:intron 35.0%
TGGTGGTCAAATTAAAGTTC+AGG - chr1_1:75726861-75726880 None:intergenic 35.0%
!! TTTAATTTGACCACCAATCC+AGG + chr1_1:75726865-75726884 Msa0044220:intron 35.0%
CTAAAGTTAATGTCCTGGAT+TGG - chr1_1:75726881-75726900 None:intergenic 35.0%
TCACACTAAAGTTAATGTCC+TGG - chr1_1:75726886-75726905 None:intergenic 35.0%
CTTTAGTGTGATAGTCATTG+TGG + chr1_1:75726895-75726914 Msa0044220:intron 35.0%
! AAGATTGATGATATGGAGGA+TGG + chr1_1:75727009-75727028 Msa0044220:intron 35.0%
CTTCTTCTATCTCTAGGTAT+TGG - chr1_1:75727036-75727055 None:intergenic 35.0%
CAATACCTAGAGATAGAAGA+AGG + chr1_1:75727034-75727053 Msa0044220:intron 35.0%
!!! CGGTCTGATGTTTTTTCTTT+TGG - chr1_1:75727060-75727079 None:intergenic 35.0%
TAGCAATCAATTGATCCATG+TGG + chr1_1:75727120-75727139 Msa0044220:intron 35.0%
! GAATCTAATGAAGTACCAGA+TGG - chr1_1:75727312-75727331 None:intergenic 35.0%
AAAAGGGCAGATATCAATTC+TGG + chr1_1:75727347-75727366 Msa0044220:intron 35.0%
ACCTCTATCATGGTTTATCA+TGG - chr1_1:75727495-75727514 None:intergenic 35.0%
AACACAAGTTTGTAAACAGG+GGG - chr1_1:75727577-75727596 None:intergenic 35.0%
TGACAGGCAATCAAACTAAA+CGG - chr1_1:75727791-75727810 None:intergenic 35.0%
!! TTTAGTTTGATTGCCTGTCA+TGG + chr1_1:75727791-75727810 Msa0044220:intron 35.0%
! TACACTGAAATTTGGGATCA+CGG + chr1_1:75727847-75727866 Msa0044220:CDS 35.0%
ATGACTAAGCTGGATAAATG+TGG + chr1_1:75727900-75727919 Msa0044220:exon 35.0%
! TTTTACATACGATGAAGGCA+AGG + chr1_1:75728004-75728023 Msa0044220:three_prime_UTR 35.0%
TCTACACATCACAATGTGCA+CGG + chr1_1:75719855-75719874 Msa0044220:CDS 40.0%
GACAAACTTCCATTGTCCAA+CGG + chr1_1:75719880-75719899 Msa0044220:intron 40.0%
AGAAGAAGCGAAATCCGATT+TGG + chr1_1:75719927-75719946 Msa0044220:CDS 40.0%
GTTGAAGTCATTGCAATTGG+CGG + chr1_1:75719949-75719968 Msa0044220:CDS 40.0%
TGTTGATGTCTCTTTGTGAC+AGG + chr1_1:75720117-75720136 Msa0044220:intron 40.0%
CAACAGAGGTCTACTAAACA+AGG + chr1_1:75720176-75720195 Msa0044220:CDS 40.0%
GCACGACTTCATAAATAGTG+GGG - chr1_1:75720477-75720496 None:intergenic 40.0%
GAGCACGACTTCATAAATAG+TGG - chr1_1:75720479-75720498 None:intergenic 40.0%
!!! GCTACGAGAGTTTTAAGGAA+AGG - chr1_1:75720529-75720548 None:intergenic 40.0%
! CTTAGGCATGCATGACTTTT+TGG + chr1_1:75720720-75720739 Msa0044220:intron 40.0%
TAGACCACTTTCACGAATCA+TGG - chr1_1:75720812-75720831 None:intergenic 40.0%
GTGGTCTAAATATGGACCTT+TGG + chr1_1:75720824-75720843 Msa0044220:intron 40.0%
GAAAAACGGGGAATAACCAA+AGG - chr1_1:75720843-75720862 None:intergenic 40.0%
!! ATTCCCCGTTTTTCTTCCTT+AGG + chr1_1:75720849-75720868 Msa0044220:intron 40.0%
AGCCACCTAAGGAAGAAAAA+CGG - chr1_1:75720857-75720876 None:intergenic 40.0%
GAAACTGTAAGGTCCACAAA+CGG + chr1_1:75720922-75720941 Msa0044220:CDS 40.0%
AGGGTTAAGACGAAAAGATG+AGG + chr1_1:75720984-75721003 Msa0044220:CDS 40.0%
! CTCAGGTAAAAGCTTTGATG+GGG + chr1_1:75721297-75721316 Msa0044220:intron 40.0%
! AGCTTTGATGGGGAAACTTA+AGG + chr1_1:75721307-75721326 Msa0044220:CDS 40.0%
AAAGGCTGTCGTATCATGTT+TGG + chr1_1:75721431-75721450 Msa0044220:intron 40.0%
AAGGAGAGTAGATCAAATGG+AGG + chr1_1:75721549-75721568 Msa0044220:intron 40.0%
AGGAGAGTAGATCAAATGGA+GGG + chr1_1:75721550-75721569 Msa0044220:intron 40.0%
GATATTTGGTAGGTGTCAGT+TGG + chr1_1:75721793-75721812 Msa0044220:intron 40.0%
! TCGGAGTTCTTTTGTATGTG+TGG - chr1_1:75722124-75722143 None:intergenic 40.0%
! TTTTTGCATTACAAGCAGCG+TGG - chr1_1:75722271-75722290 None:intergenic 40.0%
! GGAAAGGTATGGTAATTGGA+TGG + chr1_1:75722345-75722364 Msa0044220:intron 40.0%
TCTATCATTGGGATTAAGGG+TGG + chr1_1:75722371-75722390 Msa0044220:intron 40.0%
!! AGACTTGTTGACTCTAGATG+AGG + chr1_1:75722570-75722589 Msa0044220:CDS 40.0%
AGAAGCCAGAATTGGATTTG+GGG + chr1_1:75722958-75722977 Msa0044220:CDS 40.0%
TTCAAAGAAACACCCAGGAA+AGG - chr1_1:75723031-75723050 None:intergenic 40.0%
TTTCCTGGGTGTTTCTTTGA+AGG + chr1_1:75723030-75723049 Msa0044220:CDS 40.0%
ATACCTTCAAAGAAACACCC+AGG - chr1_1:75723036-75723055 None:intergenic 40.0%
GTCAAACAACAGAATACACG+AGG + chr1_1:75723382-75723401 Msa0044220:CDS 40.0%
AATCGATAAAACTGGCACTG+AGG + chr1_1:75723946-75723965 Msa0044220:intron 40.0%
!! TTCACTACCTTTAGTTCTGC+AGG - chr1_1:75724004-75724023 None:intergenic 40.0%
TTCAGTAGACCATTGCTTCT+TGG + chr1_1:75724285-75724304 Msa0044220:intron 40.0%
ATCCAATGACCAAGAAGCAA+TGG - chr1_1:75724297-75724316 None:intergenic 40.0%
TTCTTGGTCATTGGATAGTG+TGG + chr1_1:75724301-75724320 Msa0044220:intron 40.0%
ACCAGATCAGATGTAAGCAA+TGG + chr1_1:75724350-75724369 Msa0044220:intron 40.0%
CCAGATCAGATGTAAGCAAT+GGG + chr1_1:75724351-75724370 Msa0044220:intron 40.0%
GTCAAACATTCTTGGACGTA+TGG - chr1_1:75724412-75724431 None:intergenic 40.0%
TACGTCCAAGAATGTTTGAC+AGG + chr1_1:75724412-75724431 Msa0044220:intron 40.0%
GGAAACCTGTCAAACATTCT+TGG - chr1_1:75724420-75724439 None:intergenic 40.0%
!!! CCTCTTGTTTTTGGCTTTTG+GGG + chr1_1:75724522-75724541 Msa0044220:CDS 40.0%
! ACGTTGATAAGGGGGAAAAT+AGG + chr1_1:75724619-75724638 Msa0044220:CDS 40.0%
GAATCCCTGTCATGTAATAC+AGG - chr1_1:75724818-75724837 None:intergenic 40.0%
!! CTTTTGCCACTTCAAATCCA+GGG - chr1_1:75725064-75725083 None:intergenic 40.0%
!! TCTTTTGCCACTTCAAATCC+AGG - chr1_1:75725065-75725084 None:intergenic 40.0%
! GATTTGAAGTGGCAAAAGAG+TGG + chr1_1:75725066-75725085 Msa0044220:CDS 40.0%
ATCATCAGCTTCCCTTTCTT+GGG - chr1_1:75725093-75725112 None:intergenic 40.0%
TATCATCAGCTTCCCTTTCT+TGG - chr1_1:75725094-75725113 None:intergenic 40.0%
GTGGAAATACAATATAGGGG+AGG + chr1_1:75725729-75725748 Msa0044220:CDS 40.0%
ATATAGGGGAGGAAGATACA+AGG + chr1_1:75725740-75725759 Msa0044220:CDS 40.0%
TATAGGGGAGGAAGATACAA+GGG + chr1_1:75725741-75725760 Msa0044220:CDS 40.0%
!! AGCTTGTTGGCCAAAAAAAG+AGG - chr1_1:75725863-75725882 None:intergenic 40.0%
TATGATGGTTTATGGCACAG+CGG + chr1_1:75725951-75725970 Msa0044220:CDS 40.0%
GAGATATGTTTCAAGGATCG+TGG + chr1_1:75726012-75726031 Msa0044220:CDS 40.0%
ATATGTTTCAAGGATCGTGG+AGG + chr1_1:75726015-75726034 Msa0044220:CDS 40.0%
TATGTTTCAAGGATCGTGGA+GGG + chr1_1:75726016-75726035 Msa0044220:CDS 40.0%
TGTTATTGTATGGGCCATGT+GGG + chr1_1:75726192-75726211 Msa0044220:intron 40.0%
!! GAGAGCACTGACTATTACTT+TGG + chr1_1:75726251-75726270 Msa0044220:intron 40.0%
! TGGTTTGCAAACTTCTGGAA+GGG + chr1_1:75726347-75726366 Msa0044220:CDS 40.0%
TTGGCAATTTCAAAGACGGA+TGG + chr1_1:75726420-75726439 Msa0044220:CDS 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr1_1:75726604-75726623 Msa0044220:intron 40.0%
CAGAAAGAAGACTTAAACGG+TGG - chr1_1:75726781-75726800 None:intergenic 40.0%
! AAGTTAATGTCCTGGATTGG+TGG - chr1_1:75726878-75726897 None:intergenic 40.0%
! TTTGGCCTTCTTCTATCTCT+AGG - chr1_1:75727042-75727061 None:intergenic 40.0%
TCAGACCGAATCAATAAGAG+AGG + chr1_1:75727072-75727091 Msa0044220:intron 40.0%
! CGACACCTCTCTTATTGATT+CGG - chr1_1:75727080-75727099 None:intergenic 40.0%
!! AAGAGAGGTGTCGAGATAAA+TGG + chr1_1:75727087-75727106 Msa0044220:intron 40.0%
TCCTTCGCGAAGTTAAAACT+TGG + chr1_1:75727386-75727405 Msa0044220:intron 40.0%
!!! TCCAAGTTTTAACTTCGCGA+AGG - chr1_1:75727390-75727409 None:intergenic 40.0%
! TATCATGGCTTGAAGTTGGT+AGG - chr1_1:75727480-75727499 None:intergenic 40.0%
GGTTTATCATGGCTTGAAGT+TGG - chr1_1:75727484-75727503 None:intergenic 40.0%
GCCATGATAAACCATGATAG+AGG + chr1_1:75727491-75727510 Msa0044220:intron 40.0%
CAGAAAGTCAATTCCATGAC+AGG - chr1_1:75727807-75727826 None:intergenic 40.0%
CTGTGTACTGTCATGTGAAT+AGG + chr1_1:75727824-75727843 Msa0044220:intron 40.0%
GTTTAGACAGATGACTAAGC+TGG + chr1_1:75727890-75727909 Msa0044220:exon 40.0%
GGTAGTATACATAACGTCCT+AGG - chr1_1:75728039-75728058 None:intergenic 40.0%
!! GAAATGGCTTTGAAGGCTGT+GGG - chr1_1:75719721-75719740 None:intergenic 45.0%
!! AGAAATGGCTTTGAAGGCTG+TGG - chr1_1:75719722-75719741 None:intergenic 45.0%
CTTCTTCGTCACTGCCATTA+TGG + chr1_1:75719802-75719821 Msa0044220:CDS 45.0%
TACAGCGGCGGAATTGATAT+CGG + chr1_1:75719904-75719923 Msa0044220:intron 45.0%
CATTGCAATTGGCGGTAGAA+AGG + chr1_1:75719957-75719976 Msa0044220:CDS 45.0%
TCAGCCATGATTCGTGAAAG+TGG + chr1_1:75720805-75720824 Msa0044220:intron 45.0%
CCACCTAAGGAAGAAAAACG+GGG - chr1_1:75720855-75720874 None:intergenic 45.0%
GCCACCTAAGGAAGAAAAAC+GGG - chr1_1:75720856-75720875 None:intergenic 45.0%
TTTGGCTGTGCTAAGTCTGA+AGG + chr1_1:75721449-75721468 Msa0044220:intron 45.0%
!! AGGTGAAGCTTGCTGATGTT+TGG + chr1_1:75721469-75721488 Msa0044220:intron 45.0%
GGAGAGTAGATCAAATGGAG+GGG + chr1_1:75721551-75721570 Msa0044220:intron 45.0%
CTAGAGGTAGATGAAGACCT+AGG + chr1_1:75721584-75721603 Msa0044220:intron 45.0%
CTTATTCCACTAAGTGGGGT+CGG - chr1_1:75721710-75721729 None:intergenic 45.0%
! ACGCCTTATTCCACTAAGTG+GGG - chr1_1:75721714-75721733 None:intergenic 45.0%
! CACGCCTTATTCCACTAAGT+GGG - chr1_1:75721715-75721734 None:intergenic 45.0%
!! AGTTGGGCTTGTTAGTCTCA+TGG + chr1_1:75721810-75721829 Msa0044220:intron 45.0%
! CTTGTTAGTCTCATGGCCAT+GGG + chr1_1:75721817-75721836 Msa0044220:intron 45.0%
! CTTTTGTATGTGTGGCATGC+AGG - chr1_1:75722116-75722135 None:intergenic 45.0%
ACAGTCGTGATCAGTAGGTT+GGG - chr1_1:75723447-75723466 None:intergenic 45.0%
TAAGGACAGTCGTGATCAGT+AGG - chr1_1:75723452-75723471 None:intergenic 45.0%
TCACGACTGTCCTTACACTT+AGG + chr1_1:75723457-75723476 Msa0044220:CDS 45.0%
CATGCTTAGTGTCAATCGCA+CGG - chr1_1:75723620-75723639 None:intergenic 45.0%
ATGTTGTATACGGGCCTTGA+TGG + chr1_1:75723830-75723849 Msa0044220:intron 45.0%
! ACGCTTGTGGTTTGCATCAA+TGG + chr1_1:75723876-75723895 Msa0044220:intron 45.0%
! CGCTTGTGGTTTGCATCAAT+GGG + chr1_1:75723877-75723896 Msa0044220:intron 45.0%
! TGTGGTTTGCATCAATGGGA+TGG + chr1_1:75723881-75723900 Msa0044220:intron 45.0%
! GTGGTTTGCATCAATGGGAT+GGG + chr1_1:75723882-75723901 Msa0044220:intron 45.0%
! TGGTTTGCATCAATGGGATG+GGG + chr1_1:75723883-75723902 Msa0044220:intron 45.0%
!! GGCACTGAGGTACTAGATTT+TGG + chr1_1:75723959-75723978 Msa0044220:intron 45.0%
TCTGTTAAGTGGCTGTGAAC+AGG + chr1_1:75724176-75724195 Msa0044220:intron 45.0%
GACCATTGCTTCTTGGTCAT+TGG + chr1_1:75724292-75724311 Msa0044220:intron 45.0%
CCCATTGCTTACATCTGATC+TGG - chr1_1:75724354-75724373 None:intergenic 45.0%
CAGATGTAAGCAATGGGACA+AGG + chr1_1:75724357-75724376 Msa0044220:intron 45.0%
! ACTCTGGGAAGGTTGTTGTA+CGG - chr1_1:75724469-75724488 None:intergenic 45.0%
GGATAGTATACCACCACTCT+GGG - chr1_1:75724484-75724503 None:intergenic 45.0%
TGGATAGTATACCACCACTC+TGG - chr1_1:75724485-75724504 None:intergenic 45.0%
AGGAAAATGCAGGGCAAGTT+TGG - chr1_1:75724505-75724524 None:intergenic 45.0%
CCCCAAAAGCCAAAAACAAG+AGG - chr1_1:75724525-75724544 None:intergenic 45.0%
AGTCAGCAACAAACTGTCTC+TGG + chr1_1:75724552-75724571 Msa0044220:CDS 45.0%
GTCAGCAACAAACTGTCTCT+GGG + chr1_1:75724553-75724572 Msa0044220:CDS 45.0%
! ACAAACTGTCTCTGGGAAAG+AGG + chr1_1:75724560-75724579 Msa0044220:CDS 45.0%
GCTCAAAGTTGTCTGCTTCA+AGG + chr1_1:75724715-75724734 Msa0044220:CDS 45.0%
!! TAGGTGACTCTGCTTTTCCT+AGG + chr1_1:75725012-75725031 Msa0044220:intron 45.0%
!! AGGTGACTCTGCTTTTCCTA+GGG + chr1_1:75725013-75725032 Msa0044220:intron 45.0%
CAGCTTGGAAACTGGAATCT+GGG + chr1_1:75725038-75725057 Msa0044220:CDS 45.0%
AAAAGAGTGGGCCCAAGAAA+GGG + chr1_1:75725079-75725098 Msa0044220:CDS 45.0%
GGAAGCTGATGATACACCAA+TGG + chr1_1:75725100-75725119 Msa0044220:CDS 45.0%
AGCTGATGATACACCAATGG+TGG + chr1_1:75725103-75725122 Msa0044220:CDS 45.0%
AGCATATTCCACCTTCCTGT+TGG + chr1_1:75725134-75725153 Msa0044220:CDS 45.0%
AACAAAGTGGAGTCCTGTTG+TGG + chr1_1:75725710-75725729 Msa0044220:CDS 45.0%
CTGTTATTGTATGGGCCATG+TGG + chr1_1:75726191-75726210 Msa0044220:intron 45.0%
GTTATTGTATGGGCCATGTG+GGG + chr1_1:75726193-75726212 Msa0044220:intron 45.0%
TTGGCTAAGAAAACCCCACA+TGG - chr1_1:75726209-75726228 None:intergenic 45.0%
! ATTTTCACACTGGTGATCGG+TGG + chr1_1:75726327-75726346 Msa0044220:CDS 45.0%
! ATCGGTGGTTTGCAAACTTC+TGG + chr1_1:75726342-75726361 Msa0044220:CDS 45.0%
! GTGGTTTGCAAACTTCTGGA+AGG + chr1_1:75726346-75726365 Msa0044220:CDS 45.0%
! TGCAAACTTCTGGAAGGGAA+AGG + chr1_1:75726352-75726371 Msa0044220:CDS 45.0%
! TTCTGGAAGGGAAAGGCAAA+TGG + chr1_1:75726359-75726378 Msa0044220:CDS 45.0%
AAGGGAAAGGCAAATGGAGA+GGG + chr1_1:75726365-75726384 Msa0044220:CDS 45.0%
! AAGTCTGGTGATGCCTTCTT+TGG + chr1_1:75726401-75726420 Msa0044220:CDS 45.0%
GCAATTTCAAAGACGGATGG+CGG + chr1_1:75726423-75726442 Msa0044220:CDS 45.0%
GTGTGAATGCAAATGGAGAG+AGG + chr1_1:75726462-75726481 Msa0044220:CDS 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr1_1:75726559-75726578 Msa0044220:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr1_1:75726599-75726618 None:intergenic 45.0%
CTGCGTACAATACACCAAAG+TGG + chr1_1:75726633-75726652 Msa0044220:intron 45.0%
CGTACAATACACCAAAGTGG+TGG + chr1_1:75726636-75726655 Msa0044220:intron 45.0%
CATGTGGCTAACCTTATCCA+GGG + chr1_1:75727136-75727155 Msa0044220:intron 45.0%
ATGTGGCTAACCTTATCCAG+GGG + chr1_1:75727137-75727156 Msa0044220:intron 45.0%
! AAGACTTTTCCCCCTGGATA+AGG - chr1_1:75727150-75727169 None:intergenic 45.0%
TTATCCAGGGGGAAAAGTCT+TGG + chr1_1:75727149-75727168 Msa0044220:intron 45.0%
! ATAACCAAGACTTTTCCCCC+TGG - chr1_1:75727156-75727175 None:intergenic 45.0%
ACCAACTTGTCAAAGCCATC+TGG + chr1_1:75727294-75727313 Msa0044220:intron 45.0%
!! ACCAGATGGCTTTGACAAGT+TGG - chr1_1:75727298-75727317 None:intergenic 45.0%
ATGGGATCGAACCTCTATCA+TGG - chr1_1:75727505-75727524 None:intergenic 45.0%
AGGCAAGGAAGTTTGAACCT+AGG + chr1_1:75728019-75728038 Msa0044220:three_prime_UTR 45.0%
AACCTCTAGACCGATCCTAA+TGG + chr1_1:75728068-75728087 Msa0044220:three_prime_UTR 45.0%
!!! AAATATAATTTATTTTTAAC+AGG + chr1_1:75722459-75722478 Msa0044220:intron 5.0%
ACACATCACAATGTGCACGG+AGG + chr1_1:75719858-75719877 Msa0044220:CDS 50.0%
CCATTGTCCAACGGTTACAG+CGG + chr1_1:75719889-75719908 Msa0044220:intron 50.0%
CGCAGAGAAGACAGCTGAAA+TGG - chr1_1:75720012-75720031 None:intergenic 50.0%
! AGCTGTCTTCTCTGCGCTTT+TGG + chr1_1:75720016-75720035 Msa0044220:CDS 50.0%
!! CCCCGTTTTTCTTCCTTAGG+TGG + chr1_1:75720852-75720871 Msa0044220:intron 50.0%
TATCCTGCACTAGCCACCTA+AGG - chr1_1:75720868-75720887 None:intergenic 50.0%
TAGGTGGCTAGTGCAGGATA+TGG + chr1_1:75720868-75720887 Msa0044220:intron 50.0%
GGCAATTGTGAGTCCGTTTG+TGG - chr1_1:75720938-75720957 None:intergenic 50.0%
GAGGGGAGTCAAATCACTAG+AGG + chr1_1:75721568-75721587 Msa0044220:intron 50.0%
CGACCCCACTTAGTGGAATA+AGG + chr1_1:75721708-75721727 Msa0044220:intron 50.0%
! CCACGCCTTATTCCACTAAG+TGG - chr1_1:75721716-75721735 None:intergenic 50.0%
CCACTTAGTGGAATAAGGCG+TGG + chr1_1:75721713-75721732 Msa0044220:intron 50.0%
! GCTTGTTAGTCTCATGGCCA+TGG + chr1_1:75721816-75721835 Msa0044220:intron 50.0%
TGCATTACAAGCAGCGTGGT+TGG - chr1_1:75722267-75722286 None:intergenic 50.0%
TTGGGATTAAGGGTGGTTGC+TGG + chr1_1:75722378-75722397 Msa0044220:intron 50.0%
TTAAGGGTGGTTGCTGGAAG+TGG + chr1_1:75722384-75722403 Msa0044220:intron 50.0%
AGCAGCCCCAAATCCAATTC+TGG - chr1_1:75722966-75722985 None:intergenic 50.0%
GACAGTCGTGATCAGTAGGT+TGG - chr1_1:75723448-75723467 None:intergenic 50.0%
CAAGGCCCGTATACAACATG+AGG - chr1_1:75723829-75723848 None:intergenic 50.0%
GGTTTGCATCAATGGGATGG+GGG + chr1_1:75723884-75723903 Msa0044220:intron 50.0%
GTACAACAACCTTCCCAGAG+TGG + chr1_1:75724468-75724487 Msa0044220:CDS 50.0%
! AGTATACCACCACTCTGGGA+AGG - chr1_1:75724480-75724499 None:intergenic 50.0%
TGACAAACACTGCGCAGAGT+TGG + chr1_1:75724671-75724690 Msa0044220:CDS 50.0%
GCAGCTTGGAAACTGGAATC+TGG + chr1_1:75725037-75725056 Msa0044220:CDS 50.0%
CAAAAGAGTGGGCCCAAGAA+AGG + chr1_1:75725078-75725097 Msa0044220:CDS 50.0%
CAGTCTTTCGACTCTTCGGA+AGG - chr1_1:75725167-75725186 None:intergenic 50.0%
! GTCAAAAAAGCATGAGCCGG+AGG + chr1_1:75725205-75725224 Msa0044220:intron 50.0%
GACAGAACACCGTGCTTCTT+TGG - chr1_1:75725299-75725318 None:intergenic 50.0%
TGTTCGTGCAGCATCTATGC+TGG + chr1_1:75725319-75725338 Msa0044220:CDS 50.0%
AGATACAAGGGACGATGCCA+AGG + chr1_1:75725753-75725772 Msa0044220:CDS 50.0%
TGGAGGGATGATGTCATGCA+CGG + chr1_1:75726032-75726051 Msa0044220:CDS 50.0%
GAAGGGAAAGGCAAATGGAG+AGG + chr1_1:75726364-75726383 Msa0044220:CDS 50.0%
AGGGAAAGGCAAATGGAGAG+GGG + chr1_1:75726366-75726385 Msa0044220:CDS 50.0%
! GGGCGGTTTTACACAAAGTC+TGG + chr1_1:75726386-75726405 Msa0044220:CDS 50.0%
GTCACGTGACTGAAAGGTCA+CGG + chr1_1:75726565-75726584 Msa0044220:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG + chr1_1:75726566-75726585 Msa0044220:intron 50.0%
CTAAAGCTCCCGCATACACA+GGG - chr1_1:75726675-75726694 None:intergenic 50.0%
ACTAAAGCTCCCGCATACAC+AGG - chr1_1:75726676-75726695 None:intergenic 50.0%
!! GAGGTGTCGAGATAAATGGC+AGG + chr1_1:75727091-75727110 Msa0044220:intron 50.0%
! CCTGGATAAGGTTAGCCACA+TGG - chr1_1:75727138-75727157 None:intergenic 50.0%
CCATGTGGCTAACCTTATCC+AGG + chr1_1:75727135-75727154 Msa0044220:intron 50.0%
TGTGGCTAACCTTATCCAGG+GGG + chr1_1:75727138-75727157 Msa0044220:intron 50.0%
!! CTTGAAGTTGGTAGGAGCGA+GGG - chr1_1:75727472-75727491 None:intergenic 50.0%
AACAGGGGGATGCTTGACAA+GGG - chr1_1:75727563-75727582 None:intergenic 50.0%
AAACAGGGGGATGCTTGACA+AGG - chr1_1:75727564-75727583 None:intergenic 50.0%
AGGATCGGTCTAGAGGTTAG+AGG - chr1_1:75728066-75728085 None:intergenic 50.0%
AGCCATTAGGATCGGTCTAG+AGG - chr1_1:75728073-75728092 None:intergenic 50.0%
CCGCTGTAACCGTTGGACAA+TGG - chr1_1:75719892-75719911 None:intergenic 55.0%
TTGTCCAACGGTTACAGCGG+CGG + chr1_1:75719892-75719911 Msa0044220:intron 55.0%
AATTCCGCCGCTGTAACCGT+TGG - chr1_1:75719899-75719918 None:intergenic 55.0%
ATCTCTGCAGAACCTTCCCC+AGG + chr1_1:75720440-75720459 Msa0044220:intron 55.0%
GCTTTGACGATTCCTGGGGA+AGG - chr1_1:75720455-75720474 None:intergenic 55.0%
! TGGGGCTTTGACGATTCCTG+GGG - chr1_1:75720459-75720478 None:intergenic 55.0%
! GTGGGGCTTTGACGATTCCT+GGG - chr1_1:75720460-75720479 None:intergenic 55.0%
! AGTGGGGCTTTGACGATTCC+TGG - chr1_1:75720461-75720480 None:intergenic 55.0%
CTTCCTTAGGTGGCTAGTGC+AGG + chr1_1:75720862-75720881 Msa0044220:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr1_1:75721701-75721720 Msa0044220:intron 55.0%
TAGTCTCATGGCCATGGGTC+TGG + chr1_1:75721822-75721841 Msa0044220:intron 55.0%
ATGGCCATGGGTCTGGACTA+TGG + chr1_1:75721829-75721848 Msa0044220:intron 55.0%
CACTCCATAGTCCAGACCCA+TGG - chr1_1:75721836-75721855 None:intergenic 55.0%
! AGTAGGTTGGGCTCGACATC+AGG - chr1_1:75723435-75723454 None:intergenic 55.0%
CAACAACCTTCCCAGAGTGG+TGG + chr1_1:75724471-75724490 Msa0044220:CDS 55.0%
! GCTTTTCCTAGGGAGCAGCT+TGG + chr1_1:75725023-75725042 Msa0044220:CDS 55.0%
CAGTTTCCAAGCTGCTCCCT+AGG - chr1_1:75725032-75725051 None:intergenic 55.0%
CTAGGGAGCAGCTTGGAAAC+TGG + chr1_1:75725030-75725049 Msa0044220:CDS 55.0%
TCTGGGCCCTGGATTTGAAG+TGG + chr1_1:75725055-75725074 Msa0044220:CDS 55.0%
TCCACCTTCCTGTTGGTGTG+AGG + chr1_1:75725141-75725160 Msa0044220:intron 55.0%
AAGGCCTCACACCAACAGGA+AGG - chr1_1:75725148-75725167 None:intergenic 55.0%
! AAAAAGCATGAGCCGGAGGC+AGG + chr1_1:75725209-75725228 Msa0044220:intron 55.0%
TACAAGGGACGATGCCAAGG+TGG + chr1_1:75725756-75725775 Msa0044220:CDS 55.0%
!! AACCAGGGGCGTCTTGTTCT+TGG + chr1_1:75725915-75725934 Msa0044220:intron 55.0%
! GGGCGTCTTGTTCTTGGAGA+TGG + chr1_1:75725921-75725940 Msa0044220:CDS 55.0%
GGATGATGTCATGCACGGCA+AGG + chr1_1:75726037-75726056 Msa0044220:CDS 55.0%
GAAAGGCAAATGGAGAGGGG+CGG + chr1_1:75726369-75726388 Msa0044220:CDS 55.0%
! TTCAAAGACGGATGGCGGCA+TGG + chr1_1:75726428-75726447 Msa0044220:CDS 55.0%
TGAGGGGAGCCTTGATGCAA+TGG + chr1_1:75726532-75726551 Msa0044220:intron 55.0%
AAGGTCACGGGATCAAGTCC+TGG + chr1_1:75726578-75726597 Msa0044220:intron 55.0%
!! CAAAGTGGTGGATCCCTTCC+CGG + chr1_1:75726648-75726667 Msa0044220:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+TGG + chr1_1:75726680-75726699 Msa0044220:intron 55.0%
! TGCGGGAGCTTTAGTGCACT+GGG + chr1_1:75726681-75726700 Msa0044220:intron 55.0%
!! GCTTGAAGTTGGTAGGAGCG+AGG - chr1_1:75727473-75727492 None:intergenic 55.0%
GGTCTAGAGGTTAGAGGCTG+AGG - chr1_1:75728060-75728079 None:intergenic 55.0%
GGAAACTGGAATCTGGGCCC+TGG + chr1_1:75725044-75725063 Msa0044220:CDS 60.0%
GCCTCACACCAACAGGAAGG+TGG - chr1_1:75725145-75725164 None:intergenic 60.0%
TCGGAAGGCCTCACACCAAC+AGG - chr1_1:75725152-75725171 None:intergenic 60.0%
ACTGCTTCCACACCTGCCTC+CGG - chr1_1:75725224-75725243 None:intergenic 60.0%
GGCAGGTGTGGAAGCAGTGA+TGG + chr1_1:75725226-75725245 Msa0044220:intron 60.0%
TGCCAAGGTGGTCTGCCTGA+AGG + chr1_1:75725768-75725787 Msa0044220:CDS 60.0%
GCCAAGGTGGTCTGCCTGAA+GGG + chr1_1:75725769-75725788 Msa0044220:CDS 60.0%
TCCCTTCAGGCAGACCACCT+TGG - chr1_1:75725773-75725792 None:intergenic 60.0%
AGGTGGTCTGCCTGAAGGGA+AGG + chr1_1:75725773-75725792 Msa0044220:CDS 60.0%
CTCCAAGAACAAGACGCCCC+TGG - chr1_1:75725920-75725939 None:intergenic 60.0%
TGGCACAGCGGCAAGAGATC+AGG + chr1_1:75725963-75725982 Msa0044220:CDS 60.0%
AGCGGCAAGAGATCAGGTCC+AGG + chr1_1:75725969-75725988 Msa0044220:CDS 60.0%
CGGGAAGGGATCCACCACTT+TGG - chr1_1:75726650-75726669 None:intergenic 60.0%
GCATACACAGGGTCCGGGAA+GGG - chr1_1:75726664-75726683 None:intergenic 60.0%
CTTCCCGGACCCTGTGTATG+CGG + chr1_1:75726663-75726682 Msa0044220:intron 60.0%
TTCCCGGACCCTGTGTATGC+GGG + chr1_1:75726664-75726683 Msa0044220:intron 60.0%
! TCTTGATGGCAGTCGCTGCC+TGG - chr1_1:75727215-75727234 None:intergenic 60.0%
CGCATACACAGGGTCCGGGA+AGG - chr1_1:75726665-75726684 None:intergenic 65.0%
CTCCCGCATACACAGGGTCC+GGG - chr1_1:75726669-75726688 None:intergenic 65.0%
GCTCCCGCATACACAGGGTC+CGG - chr1_1:75726670-75726689 None:intergenic 65.0%
GCATGAGCCGGAGGCAGGTG+TGG + chr1_1:75725214-75725233 Msa0044220:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 75719700 75728148 75719700 ID=Msa0044220;Name=Msa0044220
chr1_1 mRNA 75719700 75728148 75719700 ID=Msa0044220-mRNA-1;Parent=Msa0044220;Name=Msa0044220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.83|0.68|1|0.72|0.52|19|245|722
chr1_1 exon 75719700 75719893 75719700 ID=Msa0044220-mRNA-1:exon:25607;Parent=Msa0044220-mRNA-1
chr1_1 exon 75719909 75720037 75719909 ID=Msa0044220-mRNA-1:exon:25608;Parent=Msa0044220-mRNA-1
chr1_1 exon 75720139 75720197 75720139 ID=Msa0044220-mRNA-1:exon:25609;Parent=Msa0044220-mRNA-1
chr1_1 exon 75720450 75720514 75720450 ID=Msa0044220-mRNA-1:exon:25610;Parent=Msa0044220-mRNA-1
chr1_1 exon 75720871 75721005 75720871 ID=Msa0044220-mRNA-1:exon:25611;Parent=Msa0044220-mRNA-1
chr1_1 exon 75721302 75721350 75721302 ID=Msa0044220-mRNA-1:exon:25612;Parent=Msa0044220-mRNA-1
chr1_1 exon 75722542 75722654 75722542 ID=Msa0044220-mRNA-1:exon:25613;Parent=Msa0044220-mRNA-1
chr1_1 exon 75722743 75722814 75722743 ID=Msa0044220-mRNA-1:exon:25614;Parent=Msa0044220-mRNA-1
chr1_1 exon 75722941 75723051 75722941 ID=Msa0044220-mRNA-1:exon:25615;Parent=Msa0044220-mRNA-1
chr1_1 exon 75723297 75723478 75723297 ID=Msa0044220-mRNA-1:exon:25616;Parent=Msa0044220-mRNA-1
chr1_1 exon 75724461 75724651 75724461 ID=Msa0044220-mRNA-1:exon:25617;Parent=Msa0044220-mRNA-1
chr1_1 exon 75724661 75724736 75724661 ID=Msa0044220-mRNA-1:exon:25618;Parent=Msa0044220-mRNA-1
chr1_1 exon 75724832 75724905 75724832 ID=Msa0044220-mRNA-1:exon:25619;Parent=Msa0044220-mRNA-1
chr1_1 exon 75725015 75725155 75725015 ID=Msa0044220-mRNA-1:exon:25620;Parent=Msa0044220-mRNA-1
chr1_1 exon 75725231 75725340 75725231 ID=Msa0044220-mRNA-1:exon:25621;Parent=Msa0044220-mRNA-1
chr1_1 exon 75725690 75725794 75725690 ID=Msa0044220-mRNA-1:exon:25622;Parent=Msa0044220-mRNA-1
chr1_1 exon 75725921 75726058 75725921 ID=Msa0044220-mRNA-1:exon:25623;Parent=Msa0044220-mRNA-1
chr1_1 exon 75726317 75726483 75726317 ID=Msa0044220-mRNA-1:exon:25624;Parent=Msa0044220-mRNA-1
chr1_1 exon 75727846 75728148 75727846 ID=Msa0044220-mRNA-1:exon:25625;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75719700 75719893 75719700 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75719909 75720037 75719909 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75720139 75720197 75720139 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75720450 75720514 75720450 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75720871 75721005 75720871 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75721302 75721350 75721302 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75722542 75722654 75722542 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75722743 75722814 75722743 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75722941 75723051 75722941 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75723297 75723478 75723297 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75724461 75724651 75724461 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75724661 75724736 75724661 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75724832 75724905 75724832 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75725015 75725155 75725015 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75725231 75725340 75725231 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75725690 75725794 75725690 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75725921 75726058 75725921 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75726317 75726483 75726317 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 CDS 75727846 75727903 75727846 ID=Msa0044220-mRNA-1:cds;Parent=Msa0044220-mRNA-1
chr1_1 three_prime_UTR 75727904 75728148 75727904 ID=Msa0044220-mRNA-1:three_prime_utr;Parent=Msa0044220-mRNA-1
Gene Sequence

>Msa0044220

ATGGAGCTTACTGCACATCCCACAGCCTTCAAAGCCATTTCTAATTTCACCTTGAATCAATTTCAATTTCAATTTCAATTTCAATGTCGATGTTCTCTTTCTCTTCTTCGTCACTGCCATTATGGATTTCGTCACAATCGCAATTCAAAACCGTTTCTACACATCACAATGTGCACGGAGGACAAACTTCCATTCGGCGGAATTGATATCGGAGAAGAAGCGAAATCCGATTTGGTTGAAGTCATTGCAATTGGCGGTAGAAAGGACGCTGTTATTGATTTCTGCTTGAATTCTCCATTTCAGCTGTCTTCTCTGCGCTTTTGGAATATCATTGTGAAAGATTCACAAGAAGCACAATTACAACAGAGGTCTACTAAACAAGAACCTTCCCCAGGAATCGTCAAAGCCCCACTATTTATGAAGTCGTGCTCAAAGACCATTGTCCTTGTGGCTAGTGCAGGATATGGATCAGACCACACTGTCGCTTTTGATATTTTTGAAACTGTAAGGTCCACAAACGGACTCACAATTGCCATAGTTTTGAAGCCTTTTAGCTTTGAAGGGTTAAGACGAAAAGATGAGGTAAAAGCTTTGATGGGGAAACTTAAGGAGAATACTAATTTACTTATTGAAATTGATATCGACGCACTTCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGATTGCAAATGATGCTGTTTTGCTAGCTATTATGGCCATATCTGTTCTAAAATCTGAAATGCACAGAAAATATATAGATAGATTGCATAATAGCATGAAAGAAACCTGCAATTCAGAAATTATTAAAATATTGGAGTGTTATAAAGAAGCCAGAATTGGATTTGGGGCTGCTTATAATATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCTTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGTGCAGTCATATGCATTATTGCGTGTTCTGAGCCCATCAATGATAGTGATATAGCAATCTTTCTGCGTATTTTCCGTCAAACAACAGAATACACGAGGGATATTATAATATCAACAGTACTTGAGCCTGATGTCGAGCCCAACCTACTGATCACGACTGTCCTTACACTTAGCTCAACCGTACAACAACCTTCCCAGAGTGGTGGTATACTATCCAAACTTGCCCTGCATTTTCCTCTTGTTTTTGGCTTTTGGGGAAAACATAGTCAGCAACAAACTGTCTCTGGGAAAGAGGATGCAGTATCTTCTCATGAAACAATGAGATCTTATAACGTTGATAAGGGGGAAAATAGGATTGCTCCCAATAAAAGATTTGACAAACACTGCGCAGAGTTGGAGCCAAACACGAGCAATAACAGCTCAAAGTTGTCTGCTTCAAGGGATTCTGAAAAAAATGAAGATTTATTTGACACCTCTAATTGTCCTATCCCTTATGAATCCGTTAATGAAGAAGGTGACTCTGCTTTTCCTAGGGAGCAGCTTGGAAACTGGAATCTGGGCCCTGGATTTGAAGTGGCAAAAGAGTGGGCCCAAGAAAGGGAAGCTGATGATACACCAATGGTGGATAATCTAAGCATATTCCACCTTCCTGTTGGTGTGGAAGCAGTGATGGAATTTACATCTTCATTTTTGAAGGCAAAACACGGTAATAGTAACAAACCAAAGAAGCACGGTGTTCTGTCTGTTCGTGCAGCATCTATGCTGGAGGCAGAACGTGATTTGTCAACAAAGTGGAGTCCTGTTGTGGAAATACAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGTGGTCTGCCTGAAGGGAAGGGGCGTCTTGTTCTTGGAGATGGAAATATCTATGATGGTTTATGGCACAGCGGCAAGAGATCAGGTCCAGGAACATTCTATTTCAAGAATGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCAAATGGAGAGGGGCGGTTTTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGACGGATGGCGGCATGGCCAGTTTTTTTGTGTGAATGCAAATGGAGAGAGGTACACTGAAATTTGGGATCACGGTGTTCTTCTAGACAGCAAGTGTTTAGACAGATGA
Protein sequence

>Msa0044220

MELTAHPTAFKAISNFTLNQFQFQFQFQCRCSLSLLRHCHYGFRHNRNSKPFLHITMCTEDKLPFGGIDIGEEAKSDLVEVIAIGGRKDAVIDFCLNSPFQLSSLRFWNIIVKDSQEAQLQQRSTKQEPSPGIVKAPLFMKSCSKTIVLVASAGYGSDHTVAFDIFETVRSTNGLTIAIVLKPFSFEGLRRKDEVKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKIANDAVLLAIMAISVLKSEMHRKYIDRLHNSMKETCNSEIIKILECYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSAVICIIACSEPINDSDIAIFLRIFRQTTEYTRDIIISTVLEPDVEPNLLITTVLTLSSTVQQPSQSGGILSKLALHFPLVFGFWGKHSQQQTVSGKEDAVSSHETMRSYNVDKGENRIAPNKRFDKHCAELEPNTSNNSSKLSASRDSEKNEDLFDTSNCPIPYESVNEEGDSAFPREQLGNWNLGPGFEVAKEWAQEREADDTPMVDNLSIFHLPVGVEAVMEFTSSFLKAKHGNSNKPKKHGVLSVRAASMLEAERDLSTKWSPVVEIQYRGGRYKGRCQGGLPEGKGRLVLGDGNIYDGLWHSGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFFCVNANGERYTEIWDHGVLLDSKCLDR*