AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0032400


Find 288 sgRNAs with CRISPR-Local

Find 887 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr1_1 gene 59462379 59475013 59462379 ID=Msa0032400;Name=Msa0032400
chr1_1 mRNA 59462379 59475013 59462379 ID=Msa0032400-mRNA-1;Parent=Msa0032400;Name=Msa0032400-mRNA-1;_AED=0.07;_eAED=0.07;_QI=99|0.94|0.94|1|1|1|19|296|1232
chr1_1 exon 59462379 59462737 59462379 ID=Msa0032400-mRNA-1:exon:18334;Parent=Msa0032400-mRNA-1
chr1_1 exon 59463113 59463193 59463113 ID=Msa0032400-mRNA-1:exon:18333;Parent=Msa0032400-mRNA-1
chr1_1 exon 59463930 59464037 59463930 ID=Msa0032400-mRNA-1:exon:18332;Parent=Msa0032400-mRNA-1
chr1_1 exon 59464118 59464177 59464118 ID=Msa0032400-mRNA-1:exon:18331;Parent=Msa0032400-mRNA-1
chr1_1 exon 59465069 59465143 59465069 ID=Msa0032400-mRNA-1:exon:18330;Parent=Msa0032400-mRNA-1
chr1_1 exon 59465231 59465416 59465231 ID=Msa0032400-mRNA-1:exon:18329;Parent=Msa0032400-mRNA-1
chr1_1 exon 59466507 59466626 59466507 ID=Msa0032400-mRNA-1:exon:18328;Parent=Msa0032400-mRNA-1
chr1_1 exon 59466809 59466991 59466809 ID=Msa0032400-mRNA-1:exon:18327;Parent=Msa0032400-mRNA-1
chr1_1 exon 59467601 59467729 59467601 ID=Msa0032400-mRNA-1:exon:18326;Parent=Msa0032400-mRNA-1
chr1_1 exon 59468681 59468882 59468681 ID=Msa0032400-mRNA-1:exon:18325;Parent=Msa0032400-mRNA-1
chr1_1 exon 59468975 59469096 59468975 ID=Msa0032400-mRNA-1:exon:18324;Parent=Msa0032400-mRNA-1
chr1_1 exon 59470030 59470254 59470030 ID=Msa0032400-mRNA-1:exon:18323;Parent=Msa0032400-mRNA-1
chr1_1 exon 59471133 59471264 59471133 ID=Msa0032400-mRNA-1:exon:18322;Parent=Msa0032400-mRNA-1
chr1_1 exon 59471351 59471440 59471351 ID=Msa0032400-mRNA-1:exon:18321;Parent=Msa0032400-mRNA-1
chr1_1 exon 59471739 59472005 59471739 ID=Msa0032400-mRNA-1:exon:18320;Parent=Msa0032400-mRNA-1
chr1_1 exon 59472101 59472394 59472101 ID=Msa0032400-mRNA-1:exon:18319;Parent=Msa0032400-mRNA-1
chr1_1 exon 59472488 59472688 59472488 ID=Msa0032400-mRNA-1:exon:18318;Parent=Msa0032400-mRNA-1
chr1_1 exon 59473046 59473325 59473046 ID=Msa0032400-mRNA-1:exon:18317;Parent=Msa0032400-mRNA-1
chr1_1 exon 59474034 59475013 59474034 ID=Msa0032400-mRNA-1:exon:18316;Parent=Msa0032400-mRNA-1
chr1_1 five_prime_UTR 59474915 59475013 59474915 ID=Msa0032400-mRNA-1:five_prime_utr;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59474034 59474914 59474034 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59473046 59473325 59473046 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59472488 59472688 59472488 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59472101 59472394 59472101 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59471739 59472005 59471739 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59471351 59471440 59471351 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59471133 59471264 59471133 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59470030 59470254 59470030 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59468975 59469096 59468975 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59468681 59468882 59468681 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59467601 59467729 59467601 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59466809 59466991 59466809 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59466507 59466626 59466507 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59465231 59465416 59465231 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59465069 59465143 59465069 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59464118 59464177 59464118 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59463930 59464037 59463930 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59463113 59463193 59463113 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 CDS 59462675 59462737 59462675 ID=Msa0032400-mRNA-1:cds;Parent=Msa0032400-mRNA-1
chr1_1 three_prime_UTR 59462379 59462674 59462379 ID=Msa0032400-mRNA-1:three_prime_utr;Parent=Msa0032400-mRNA-1
Gene Sequence

>Msa0032400

ATGGATTCCATTCTCTATTCTTCTTCTTCACCATCTCTTCGATTTCCATCACACCTTCCTTTCACCTCTTTCCGCCCCCTTCCAAATCATACACTCCTCTTCAAACCACCACCACGCGCTTCCATCACTCTCTCCGCAAATCAACAAAACAACCACACCGTTTTATCCCAACCAACTAACTCAACTCTTGTTTTATCCCAATGCTGCTTAACAAAACAACTCATTCTTCGCGCGTTATTCTGTTTCGCCGTCGGTGTTTCTACCTTCGGAACATTTCAAATTGCGCCGGCGTTTGCACTTCCGACGATACCTTGGGTTCAATTTTTGAGTAAGAAGAAAGAGAAGAAGAATCAACACGAGTATTCTGATTGCACGCAAAAAGTGGTGGAGACTGTGCCGAGTTTGTTGAGGACTATTGAAGAGGTTAGGAAAGGGAACGGTGATTTTGAAGATGTGAAACGAGCTTTGGAGTTTGTGAAATTGAAGAGAGATGAAATGGAGAGAGAGATTCTCGAGAGGATGCATCCGGTTTTGATGGATTTGAAGGAGGAGTTGAGGTTGTTGCAGATAAAGGAAGGTGAGATTAGTTGGCAGATGGCGGAGGTGAACAGGGAGTATAGAAAATTGATGGGGTGGGAGATGGATATGAAGGATAACGTAGTGAATGAGTTGGAGAAGAAGGTGTTGGACAAGAGAATGGTGGAGTTGGAGAAGAAGTGGAATGAGATTTTGGTGAAAATTGATGAAATGGAGGATGTCATTTCGAGGAAAGAGACGGTGGCGTTGAGTTATGGGGTGTTGGAGATTTGTTTTATTGAGAAGGAATGTGAGAACTTGGTGGAGAGATTCAAACAAGAAATCAAACAGAAGAAAATCGAAAGTTCATTCGCAAGCTCAGTTAACAAGCTATCAAAATCCGTCATTCAAAAAGACTTGGAAACTGTGCAAAGAAAGCAAATAGAGCAAACTATTCTACCTAGCATTGTGGATGTTGATGATCTCGGGCCATTCCTTCATCAAGACTCTGTTGATTTTGACCCACATTTAGAAAGATGTCTCAAAGACTCAAGGGAGCAGCAGAAGAATTTAGAGGCCCAGATAAGGAAAGATATGAAGTATGACAAGGAAAAGCGTAGTGTTGTGTACTCACCTGAAGAAGAGGAAAGGATTCTTTTGGACCGAGATAGGGTAGTGTCAAAGACTTGGTACAATGAAGAGAAAAATAGATGGGAGATGGATCCAGTGGCTGTTCCTCATGCTGTCTCAAAAAAGCTAATAGAGCATGTTCGGATTAGGTATGATGGGCGTGCAATGTATATTGCATTGAAGGGGGAGGACAAAGAGTTTTATGTAGACATAAAGGAATTCGAAAGGCTTTTTGAAGATATTGGGGGTTTTGATGTGCTATATAGGAAAATGCTAGCCTGTGGTATTCCAACAGCTGTTCATCTAATGTGGATTCCTTTGTCAGAGTTAAGTGTGCGCCAACGGATTTCTGTGATATTAAGGTTCCCTCTTCGATTTTTGAGTGGCCGGTGGAATTTCGAAACTGTCTTGACTACAAGAAATTTGATCTTTGACAATATTAAGGAAATGACTGATGACATAATGACAGTGATAGGGTTTCCTATTGTGGAATATATACTCCCTAACCCGGTGAGGGTAAAATTGGGAATGGCTTGGCCAGAGGAAGAGACAATGAACACTCCATGGTACTTGAATTGGCAATTAAATGCAGAAGCAAGAGTTCAATCCAGACGAGCAGATGGTGATTTTCGATGGATCATGTTGTTTATCGCAAGAGCTGCTATTTCAGGATTTGTTTTGACTAACGTGTTCCAATTTATGAGGAGAAAAATTCCAAGACTTCTTGGTTATGGTCCTATGCGAAAAAGTCCGAATAGGAGGAAACTTGAGCAAGTGGCTTATTACTATGACGAAAGAAAGGGACGTATGATGGATAGGAGAAGGGAGGGTGTTGATCCTATAAAAACAGCTTTTGAGCACATGAAGAGGGTGAAGAAACCACCAATACCATTGAATAACTTTTCTAGCATTGACTCTATGAAAGAGGAAATCGGTGAAGTTGTGGCATTTTTGCAAAATCCAAGGGCATTTCAAGAAATGGGAGCGCGGGCACCTCGGATGTCTATATTAACTGCTAAGATCCGTACCTGGGAACTTTTTATATTGCAGGGTGTTCTTATTGTAGGTGAGAGGGGTACGGGCAAAACGTCTCTAGCAATGGCTATAGCTGCTGAGGCTAAGGTGCCTGTTGTTGAAATTAAGGCCCAACAATTGGAGGCTGGGATGTGGGTTGGACAAAGTGCATCCAATGTTCGTGAATTGTTTCAAACAGCAAGAGATTTGGCTCCTGTAATATTGTTCGTGGAAGATTTTGACCTATTTGCTGGTGTACGTGGCAAATTTATCCACACCGAAAATCAAGATCATGAAGCTTTCATTAATCAATTGCTTGTGGAACTTGACGGATTTGAGAAACAAGACGGTGTTGTTTTGATGGCTACTACAAGAAATCTTAAGCAAATTGACGAGGCCTTGAAGAGGCCAGGTCGCATGGATAGAATATTTCATCTTCAAAGACCAACACAGGCAGAGAGAGAAAACATTTTGTACTCAGCAGCGAAGGAAACCATGGATGACCAGCTTGTCGAATATGTAGACTGGAAAAAGGTTGCTGAGAAGACGGCTCTTTTACGACCTATCGAGTTAAAACTTGTTCCCATAGCTTTAGAAGGAAGTGCCTTCCGGAGCAAAGTTCTTGACACAGATGAAATAATGAGCTACTGTAGTTTCTTTGCAACTTTCAGTTCTTCGATGCCCCAATGGCTGAGGCAAACCAAAATTGTCAAGAAGTTAAACAAAATGTTGGTGAATCACCTGGGACTGACATTAACAAAAGAAGATCTCCAAAATGTTGTTGATTTGATGGAACCATACGGCCAGATAAGCAATGGAATAGAGCTTTTGAGCCCTCCTCTTGATTGGACAAGGGAAACTAAATTTCCACATGCTGTCTGGGCTGCTGGTCGTGGTCTTGTTGCTCATTTATTACCAAATTTTGATGTTGTTGATAATCTTTGGCTTGAGCCTCTATCTTGGCAGGGAATTGGATGTACGAAAATCACGAAAGCAAGAAATGATGGTTACATTGATGGGAATATAGAATCAAGATCATATCTTGAAAAGAAACTTGTATTTTGTTTTGGTTCTTATGTTGCATCCCAAATGTTACTTCCTTTTGGGGAAGAAAACTTACTGTCTTCATCTGAGATGCAGCAGGCACAAGAGATAGCTACACGAATGGTCATTCAATATGGATGGGGGCCTGATGATAGTGCTGCAGTTTATTACTGTAGTAATGCGGTTGCTACATTAAGCATGGCAGGTGACCATGAGTATGTGATGGCAGCTAAAGTTCAAAAGATGTATGATTTGGCATATCTCAAAGCAAGAGAAATGCTGCAGAGAAATCGCCTGGTACTAGAAAAGATTGTAGAGGAATTACTTGAATTTGAAATTTTGACTAGAAAGGATTTAGAAAGAATTACTGAAGCTAATGATGGAATCAGGGAGAAAGAGCCCTTTACTCTTGTTGAAGTTCAAGCTAGTGAGCCAACGTCAGGCAGCCTCCTTGAAAGAGGAAATGCATCAGGAGGTGCTTTGCTAGCATCCTAG

Protein sequence

>Msa0032400

MDSILYSSSSPSLRFPSHLPFTSFRPLPNHTLLFKPPPRASITLSANQQNNHTVLSQPTNSTLVLSQCCLTKQLILRALFCFAVGVSTFGTFQIAPAFALPTIPWVQFLSKKKEKKNQHEYSDCTQKVVETVPSLLRTIEEVRKGNGDFEDVKRALEFVKLKRDEMEREILERMHPVLMDLKEELRLLQIKEGEISWQMAEVNREYRKLMGWEMDMKDNVVNELEKKVLDKRMVELEKKWNEILVKIDEMEDVISRKETVALSYGVLEICFIEKECENLVERFKQEIKQKKIESSFASSVNKLSKSVIQKDLETVQRKQIEQTILPSIVDVDDLGPFLHQDSVDFDPHLERCLKDSREQQKNLEAQIRKDMKYDKEKRSVVYSPEEEERILLDRDRVVSKTWYNEEKNRWEMDPVAVPHAVSKKLIEHVRIRYDGRAMYIALKGEDKEFYVDIKEFERLFEDIGGFDVLYRKMLACGIPTAVHLMWIPLSELSVRQRISVILRFPLRFLSGRWNFETVLTTRNLIFDNIKEMTDDIMTVIGFPIVEYILPNPVRVKLGMAWPEEETMNTPWYLNWQLNAEARVQSRRADGDFRWIMLFIARAAISGFVLTNVFQFMRRKIPRLLGYGPMRKSPNRRKLEQVAYYYDERKGRMMDRRREGVDPIKTAFEHMKRVKKPPIPLNNFSSIDSMKEEIGEVVAFLQNPRAFQEMGARAPRMSILTAKIRTWELFILQGVLIVGERGTGKTSLAMAIAAEAKVPVVEIKAQQLEAGMWVGQSASNVRELFQTARDLAPVILFVEDFDLFAGVRGKFIHTENQDHEAFINQLLVELDGFEKQDGVVLMATTRNLKQIDEALKRPGRMDRIFHLQRPTQAERENILYSAAKETMDDQLVEYVDWKKVAEKTALLRPIELKLVPIALEGSAFRSKVLDTDEIMSYCSFFATFSSSMPQWLRQTKIVKKLNKMLVNHLGLTLTKEDLQNVVDLMEPYGQISNGIELLSPPLDWTRETKFPHAVWAAGRGLVAHLLPNFDVVDNLWLEPLSWQGIGCTKITKARNDGYIDGNIESRSYLEKKLVFCFGSYVASQMLLPFGEENLLSSSEMQQAQEIATRMVIQYGWGPDDSAAVYYCSNAVATLSMAGDHEYVMAAKVQKMYDLAYLKAREMLQRNRLVLEKIVEELLEFEILTRKDLERITEANDGIREKEPFTLVEVQASEPTSGSLLERGNASGGALLAS*