Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547760 | XP_003606581.1 | 97.802 | 546 | 12 | 0 | 1 | 546 | 1 | 546 | 0.0 | 1089 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547760 | sp|Q6AWW5|Y5262_ARATH | 61.090 | 532 | 191 | 4 | 19 | 546 | 5 | 524 | 0.0 | 635 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547760 | G7JSN3 | 97.802 | 546 | 12 | 0 | 1 | 546 | 1 | 546 | 0.0 | 1089 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0547760 | -0.824927 | 6.191702e-54 | -8.615850e-47 |
| Msa0006070 | Msa0547760 | 0.800932 | 1.142878e-48 | -8.615850e-47 |
| Msa0055730 | Msa0547760 | 0.805300 | 1.427022e-49 | -8.615850e-47 |
| Msa0100090 | Msa0547760 | 0.803377 | 3.588899e-49 | -8.615850e-47 |
| Msa0173990 | Msa0547760 | 0.825746 | 3.962135e-54 | -8.615850e-47 |
| Msa0188630 | Msa0547760 | 0.802089 | 6.619474e-49 | -8.615850e-47 |
| Msa0202750 | Msa0547760 | 0.807414 | 5.114710e-50 | -8.615850e-47 |
| Msa0212310 | Msa0547760 | 0.830124 | 3.504138e-55 | -8.615850e-47 |
| Msa0215320 | Msa0547760 | -0.815311 | 9.867194e-52 | -8.615850e-47 |
| Msa0217400 | Msa0547760 | 0.803159 | 3.982881e-49 | -8.615850e-47 |
| Msa0398380 | Msa0547760 | 0.823680 | 1.216112e-53 | -8.615850e-47 |
| Msa0414950 | Msa0547760 | -0.808108 | 3.641813e-50 | -8.615850e-47 |
| Msa0419820 | Msa0547760 | 0.808516 | 2.980042e-50 | -8.615850e-47 |
| Msa0421780 | Msa0547760 | -0.830689 | 2.549825e-55 | -8.615850e-47 |
| Msa0432770 | Msa0547760 | 0.801137 | 1.037870e-48 | -8.615850e-47 |
| Msa0459770 | Msa0547760 | -0.823439 | 1.384166e-53 | -8.615850e-47 |
| Msa0466390 | Msa0547760 | 0.821589 | 3.725766e-53 | -8.615850e-47 |
| Msa0467960 | Msa0547760 | -0.837671 | 4.529510e-57 | -8.615850e-47 |
| Msa0243710 | Msa0547760 | 0.827088 | 1.897704e-54 | -8.615850e-47 |
| Msa0270270 | Msa0547760 | 0.821802 | 3.326574e-53 | -8.615850e-47 |
| Msa0272530 | Msa0547760 | 0.800919 | 1.149610e-48 | -8.615850e-47 |
| Msa0279790 | Msa0547760 | 0.804926 | 1.708478e-49 | -8.615850e-47 |
| Msa0312690 | Msa0547760 | -0.800574 | 1.352227e-48 | -8.615850e-47 |
| Msa0320100 | Msa0547760 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
| Msa0323080 | Msa0547760 | 0.817928 | 2.556755e-52 | -8.615850e-47 |
| Msa0326670 | Msa0547760 | 0.814233 | 1.710349e-51 | -8.615850e-47 |
| Msa0333720 | Msa0547760 | -0.802964 | 4.368873e-49 | -8.615850e-47 |
| Msa0335040 | Msa0547760 | 0.807429 | 5.077610e-50 | -8.615850e-47 |
| Msa0339790 | Msa0547760 | 0.805130 | 1.548352e-49 | -8.615850e-47 |
| Msa0340450 | Msa0547760 | 0.814588 | 1.427320e-51 | -8.615850e-47 |
| Msa0344830 | Msa0547760 | 0.822371 | 2.455332e-53 | -8.615850e-47 |
| Msa0347360 | Msa0547760 | 0.805149 | 1.534809e-49 | -8.615850e-47 |
| Msa0350990 | Msa0547760 | 0.805196 | 1.499819e-49 | -8.615850e-47 |
| Msa0351030 | Msa0547760 | 0.803066 | 4.161874e-49 | -8.615850e-47 |
| Msa0484780 | Msa0547760 | 0.828463 | 8.864210e-55 | -8.615850e-47 |
| Msa0516370 | Msa0547760 | 0.807755 | 4.328226e-50 | -8.615850e-47 |
| Msa0521880 | Msa0547760 | 0.802188 | 6.314750e-49 | -8.615850e-47 |
| Msa0535060 | Msa0547760 | 0.804903 | 1.727686e-49 | -8.615850e-47 |
| Msa0547760 | Msa0548280 | -0.810424 | 1.160690e-50 | -8.615850e-47 |
| Msa0547760 | Msa0558690 | 0.817282 | 3.575490e-52 | -8.615850e-47 |
| Msa0547760 | Msa0562440 | 0.829690 | 4.469587e-55 | -8.615850e-47 |
| Msa0547760 | Msa0567020 | 0.818709 | 1.701714e-52 | -8.615850e-47 |
| Msa0547760 | Msa0568820 | 0.815103 | 1.097105e-51 | -8.615850e-47 |
| Msa0547760 | Msa0579290 | 0.801261 | 9.785930e-49 | -8.615850e-47 |
| Msa0547760 | Msa0579390 | 0.812619 | 3.869945e-51 | -8.615850e-47 |
| Msa0547760 | Msa0591770 | 0.802671 | 5.022914e-49 | -8.615850e-47 |
| Msa0547760 | Msa0596800 | 0.801367 | 9.309401e-49 | -8.615850e-47 |
| Msa0547760 | Msa0621590 | 0.813092 | 3.049581e-51 | -8.615850e-47 |
| Msa0547760 | Msa0623080 | 0.840054 | 1.095392e-57 | -8.615850e-47 |
| Msa0547760 | Msa0638280 | 0.827616 | 1.418076e-54 | -8.615850e-47 |
| Msa0547760 | Msa0638320 | 0.832394 | 9.691252e-56 | -8.615850e-47 |
| Msa0547760 | Msa0657970 | 0.802250 | 6.132598e-49 | -8.615850e-47 |
| Msa0547760 | Msa0669850 | 0.804443 | 2.154809e-49 | -8.615850e-47 |
| Msa0547760 | Msa0677270 | 0.823536 | 1.313635e-53 | -8.615850e-47 |
| Msa0547760 | Msa0689010 | 0.916386 | 1.896267e-85 | -8.615850e-47 |
| Msa0547760 | Msa0693380 | 0.823948 | 1.052334e-53 | -8.615850e-47 |
| Msa0547760 | Msa0752160 | 0.805291 | 1.433177e-49 | -8.615850e-47 |
| Msa0547760 | Msa0780400 | 0.821382 | 4.159764e-53 | -8.615850e-47 |
| Msa0547760 | Msa0790660 | -0.803628 | 3.183681e-49 | -8.615850e-47 |
| Msa0547760 | Msa0824680 | 0.809486 | 1.847613e-50 | -8.615850e-47 |
| Msa0547760 | Msa0850960 | 0.818578 | 1.821796e-52 | -8.615850e-47 |
| Msa0547760 | Msa0867890 | 0.806521 | 7.899995e-50 | -8.615850e-47 |
| Msa0547760 | Msa0874500 | 0.800606 | 1.332200e-48 | -8.615850e-47 |
| Msa0547760 | Msa0906990 | 0.809050 | 2.291973e-50 | -8.615850e-47 |
| Msa0547760 | Msa0907070 | 0.809895 | 1.508853e-50 | -8.615850e-47 |
| Msa0547760 | Msa0925250 | 0.819098 | 1.388176e-52 | -8.615850e-47 |
| Msa0547760 | Msa0930460 | -0.815488 | 9.009352e-52 | -8.615850e-47 |
| Msa0547760 | Msa0951450 | 0.819722 | 1.000485e-52 | -8.615850e-47 |
| Msa0547760 | Msa0961490 | 0.824050 | 9.955128e-54 | -8.615850e-47 |
| Msa0547760 | Msa0962180 | 0.805938 | 1.048284e-49 | -8.615850e-47 |
| Msa0547760 | Msa0966090 | 0.834206 | 3.426407e-56 | -8.615850e-47 |
| Msa0547760 | Msa0975220 | 0.802847 | 4.618483e-49 | -8.615850e-47 |
| Msa0547760 | Msa0990960 | 0.803928 | 2.757990e-49 | -8.615850e-47 |
| Msa0547760 | Msa0992490 | -0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa0547760 | Msa1000300 | 0.817416 | 3.334907e-52 | -8.615850e-47 |
| Msa0547760 | Msa1027290 | 0.817323 | 3.499605e-52 | -8.615850e-47 |
| Msa0547760 | Msa1034360 | 0.819089 | 1.394844e-52 | -8.615850e-47 |
| Msa0547760 | Msa1046300 | 0.825789 | 3.870209e-54 | -8.615850e-47 |
| Msa0547760 | Msa1074060 | 0.833704 | 4.578123e-56 | -8.615850e-47 |
| Msa0547760 | Msa1075220 | -0.807526 | 4.841879e-50 | -8.615850e-47 |
| Msa0547760 | Msa1082500 | 0.844453 | 7.488103e-59 | -8.615850e-47 |
| Msa0547760 | Msa1130270 | -0.819681 | 1.022176e-52 | -8.615850e-47 |
| Msa0547760 | Msa1156180 | 0.816502 | 5.350070e-52 | -8.615850e-47 |
| Msa0547760 | Msa1195920 | 0.805453 | 1.325032e-49 | -8.615850e-47 |
| Msa0547760 | Msa1217860 | 0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa0547760 | Msa1271210 | 0.809256 | 2.070303e-50 | -8.615850e-47 |
| Msa0547760 | Msa1278840 | 0.806762 | 7.028987e-50 | -8.615850e-47 |
| Msa0547760 | Msa1305870 | 0.807303 | 5.398962e-50 | -8.615850e-47 |
| Msa0547760 | Msa1308380 | 0.802781 | 4.767044e-49 | -8.615850e-47 |
| Msa0547760 | Msa1336490 | 0.818597 | 1.804399e-52 | -8.615850e-47 |
| Msa0547760 | Msa1351620 | 0.819007 | 1.455699e-52 | -8.615850e-47 |
| Msa0547760 | Msa1361850 | 0.800477 | 1.415168e-48 | -8.615850e-47 |
| Msa0547760 | Msa1362880 | 0.824573 | 7.502068e-54 | -8.615850e-47 |
| Msa0547760 | Msa1369530 | 0.816611 | 5.059292e-52 | -8.615850e-47 |
| Msa0547760 | Msa1384350 | 0.803169 | 3.962939e-49 | -8.615850e-47 |
| Msa0547760 | Msa1434350 | 0.801051 | 1.080447e-48 | -8.615850e-47 |
| Msa0547760 | Msa1439320 | 0.800887 | 1.166966e-48 | -8.615850e-47 |
| Msa0547760 | Msa1441190 | 0.800983 | 1.115588e-48 | -8.615850e-47 |
| Msa0547760 | Msa1455490 | 0.807787 | 4.261060e-50 | -8.615850e-47 |
| Msa0547760 | Msa1461250 | -0.803788 | 2.949373e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547760 | MtrunA17_Chr4g0030551 | 97.802 | 546 | 12 | 0 | 1 | 546 | 1 | 546 | 0.0 | 1089 |
| Msa0547760 | MtrunA17_Chr2g0327711 | 78.293 | 539 | 112 | 3 | 12 | 546 | 7 | 544 | 0.0 | 830 |
| Msa0547760 | MtrunA17_Chr7g0263421 | 60.000 | 525 | 205 | 3 | 22 | 546 | 1 | 520 | 0.0 | 613 |
| Msa0547760 | MtrunA17_Chr7g0276681 | 56.792 | 530 | 216 | 7 | 17 | 546 | 30 | 546 | 0.0 | 562 |
| Msa0547760 | MtrunA17_Chr1g0212971 | 46.570 | 554 | 255 | 9 | 16 | 546 | 58 | 593 | 2.11e-154 | 454 |
| Msa0547760 | MtrunA17_Chr1g0161231 | 43.561 | 528 | 272 | 8 | 35 | 546 | 14 | 531 | 1.31e-144 | 427 |
| Msa0547760 | MtrunA17_Chr8g0391711 | 45.010 | 491 | 249 | 7 | 66 | 546 | 59 | 538 | 6.41e-138 | 410 |
| Msa0547760 | MtrunA17_Chr7g0263471 | 43.613 | 548 | 268 | 9 | 19 | 546 | 56 | 582 | 4.95e-129 | 389 |
| Msa0547760 | MtrunA17_Chr2g0331191 | 25.847 | 561 | 321 | 13 | 28 | 514 | 67 | 606 | 9.41e-40 | 153 |
| Msa0547760 | MtrunA17_Chr2g0331191 | 25.391 | 256 | 184 | 4 | 32 | 286 | 2 | 251 | 8.52e-17 | 83.6 |
| Msa0547760 | MtrunA17_Chr2g0331201 | 25.813 | 523 | 290 | 14 | 32 | 478 | 71 | 571 | 8.66e-35 | 139 |
| Msa0547760 | MtrunA17_Chr2g0331201 | 23.016 | 252 | 148 | 4 | 72 | 288 | 38 | 278 | 2.03e-18 | 89.0 |
| Msa0547760 | MtrunA17_Chr5g0439161 | 26.566 | 463 | 284 | 16 | 67 | 491 | 207 | 651 | 1.13e-19 | 92.8 |
| Msa0547760 | MtrunA17_Chr7g0233331 | 24.297 | 391 | 232 | 11 | 74 | 432 | 9 | 367 | 1.33e-17 | 85.1 |
| Msa0547760 | MtrunA17_Chr8g0369921 | 23.148 | 324 | 212 | 6 | 74 | 384 | 10 | 309 | 8.10e-16 | 80.1 |
| Msa0547760 | MtrunA17_Chr8g0370361 | 25.000 | 288 | 180 | 6 | 109 | 384 | 47 | 310 | 9.35e-16 | 79.7 |
| Msa0547760 | MtrunA17_Chr3g0122941 | 26.408 | 284 | 178 | 10 | 35 | 294 | 109 | 385 | 9.90e-16 | 80.5 |
| Msa0547760 | MtrunA17_Chr3g0122941 | 28.571 | 196 | 122 | 4 | 100 | 282 | 100 | 290 | 9.99e-14 | 73.9 |
| Msa0547760 | MtrunA17_Chr6g0458951 | 32.683 | 205 | 117 | 6 | 108 | 294 | 192 | 393 | 1.38e-15 | 80.1 |
| Msa0547760 | MtrunA17_Chr8g0367671 | 24.315 | 292 | 183 | 5 | 109 | 386 | 48 | 315 | 3.54e-15 | 77.8 |
| Msa0547760 | MtrunA17_Chr1g0211241 | 29.474 | 190 | 131 | 3 | 109 | 298 | 139 | 325 | 7.29e-15 | 77.8 |
| Msa0547760 | MtrunA17_Chr5g0439361 | 22.691 | 379 | 257 | 8 | 123 | 480 | 5 | 368 | 7.96e-15 | 76.6 |
| Msa0547760 | MtrunA17_Chr8g0376971 | 30.769 | 195 | 119 | 3 | 70 | 248 | 102 | 296 | 1.32e-14 | 77.0 |
| Msa0547760 | MtrunA17_Chr8g0376971 | 26.484 | 219 | 143 | 3 | 108 | 308 | 188 | 406 | 3.03e-14 | 75.9 |
| Msa0547760 | MtrunA17_Chr5g0418551 | 33.750 | 160 | 101 | 4 | 143 | 300 | 58 | 214 | 2.01e-14 | 73.2 |
| Msa0547760 | MtrunA17_Chr3g0136651 | 22.902 | 441 | 236 | 14 | 107 | 477 | 3 | 409 | 2.12e-14 | 75.5 |
| Msa0547760 | MtrunA17_Chr8g0364031 | 25.397 | 252 | 172 | 3 | 77 | 315 | 13 | 261 | 2.17e-14 | 75.5 |
| Msa0547760 | MtrunA17_Chr8g0361991 | 28.387 | 155 | 109 | 1 | 109 | 261 | 11 | 165 | 7.77e-14 | 73.9 |
| Msa0547760 | MtrunA17_Chr1g0178581 | 23.620 | 326 | 179 | 5 | 106 | 384 | 9 | 311 | 1.39e-13 | 73.2 |
| Msa0547760 | MtrunA17_Chr3g0083331 | 22.785 | 316 | 209 | 7 | 104 | 384 | 5 | 320 | 2.52e-13 | 72.0 |
| Msa0547760 | MtrunA17_Chr2g0328031 | 28.095 | 210 | 126 | 4 | 71 | 261 | 12 | 215 | 3.84e-13 | 71.6 |
| Msa0547760 | MtrunA17_Chr7g0262731 | 27.200 | 250 | 164 | 8 | 103 | 341 | 7 | 249 | 4.91e-13 | 71.6 |
| Msa0547760 | MtrunA17_Chr8g0353311 | 23.939 | 330 | 174 | 8 | 107 | 384 | 12 | 316 | 7.86e-13 | 70.5 |
| Msa0547760 | MtrunA17_Chr5g0409271 | 30.942 | 223 | 127 | 6 | 101 | 322 | 8 | 204 | 7.86e-13 | 68.9 |
| Msa0547760 | MtrunA17_Chr5g0439351 | 20.089 | 448 | 306 | 9 | 62 | 480 | 261 | 685 | 8.91e-13 | 71.2 |
| Msa0547760 | MtrunA17_Chr6g0461061 | 28.472 | 288 | 169 | 13 | 34 | 315 | 246 | 502 | 2.65e-12 | 69.3 |
| Msa0547760 | MtrunA17_Chr6g0461061 | 30.811 | 185 | 105 | 7 | 29 | 213 | 308 | 469 | 5.42e-11 | 65.1 |
| Msa0547760 | MtrunA17_Chr8g0354071 | 22.741 | 343 | 215 | 8 | 116 | 432 | 2 | 320 | 4.64e-12 | 67.8 |
| Msa0547760 | MtrunA17_Chr8g0366431 | 24.113 | 282 | 165 | 7 | 173 | 430 | 32 | 288 | 4.77e-12 | 67.8 |
| Msa0547760 | MtrunA17_Chr1g0196261 | 29.018 | 224 | 131 | 10 | 99 | 298 | 210 | 429 | 6.41e-12 | 67.8 |
| Msa0547760 | MtrunA17_Chr4g0031491 | 23.167 | 341 | 223 | 9 | 68 | 382 | 3 | 330 | 6.90e-12 | 67.8 |
| Msa0547760 | MtrunA17_Chr4g0064931 | 31.606 | 193 | 123 | 6 | 109 | 298 | 40 | 226 | 7.91e-12 | 68.2 |
| Msa0547760 | MtrunA17_Chr3g0093531 | 22.741 | 343 | 215 | 8 | 116 | 432 | 2 | 320 | 1.43e-11 | 66.2 |
| Msa0547760 | MtrunA17_Chr5g0439191 | 33.117 | 154 | 94 | 5 | 135 | 280 | 1 | 153 | 1.73e-11 | 63.2 |
| Msa0547760 | MtrunA17_Chr2g0293861 | 32.026 | 153 | 95 | 5 | 136 | 280 | 27 | 178 | 2.30e-11 | 63.5 |
| Msa0547760 | MtrunA17_Chr4g0063141 | 29.762 | 168 | 113 | 4 | 136 | 303 | 548 | 710 | 4.70e-11 | 65.9 |
| Msa0547760 | MtrunA17_Chr7g0262761 | 25.907 | 193 | 131 | 4 | 74 | 255 | 12 | 203 | 9.32e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547760 | AT1G07710.2 | 69.636 | 550 | 156 | 5 | 1 | 546 | 1 | 543 | 0.0 | 725 |
| Msa0547760 | AT1G07710.1 | 69.636 | 550 | 156 | 5 | 1 | 546 | 1 | 543 | 0.0 | 725 |
| Msa0547760 | AT5G60070.1 | 64.727 | 550 | 185 | 5 | 2 | 546 | 3 | 548 | 0.0 | 694 |
| Msa0547760 | AT5G02620.4 | 61.090 | 532 | 191 | 4 | 19 | 546 | 5 | 524 | 0.0 | 635 |
| Msa0547760 | AT5G02620.1 | 61.090 | 532 | 191 | 4 | 19 | 546 | 5 | 524 | 0.0 | 635 |
| Msa0547760 | AT5G02620.3 | 61.090 | 532 | 191 | 4 | 19 | 546 | 5 | 524 | 0.0 | 635 |
| Msa0547760 | AT5G02620.5 | 58.739 | 555 | 190 | 5 | 19 | 546 | 5 | 547 | 0.0 | 624 |
| Msa0547760 | AT5G02620.2 | 58.739 | 555 | 190 | 5 | 19 | 546 | 5 | 547 | 0.0 | 624 |
| Msa0547760 | AT2G31820.1 | 55.617 | 543 | 227 | 8 | 8 | 546 | 130 | 662 | 0.0 | 564 |
| Msa0547760 | AT1G05640.1 | 56.957 | 539 | 216 | 9 | 15 | 546 | 98 | 627 | 0.0 | 553 |
| Msa0547760 | AT3G12360.2 | 46.069 | 547 | 264 | 9 | 16 | 546 | 47 | 578 | 1.80e-147 | 436 |
| Msa0547760 | AT3G12360.1 | 46.069 | 547 | 264 | 9 | 16 | 546 | 59 | 590 | 2.20e-147 | 436 |
| Msa0547760 | AT3G09550.1 | 44.161 | 548 | 270 | 8 | 19 | 546 | 76 | 607 | 1.16e-136 | 409 |
| Msa0547760 | AT3G09550.3 | 44.161 | 548 | 270 | 8 | 19 | 546 | 76 | 607 | 1.16e-136 | 409 |
| Msa0547760 | AT3G09550.2 | 44.161 | 548 | 270 | 8 | 19 | 546 | 83 | 614 | 1.63e-136 | 409 |
| Msa0547760 | AT2G01680.1 | 43.943 | 487 | 250 | 4 | 35 | 507 | 14 | 491 | 2.10e-134 | 401 |
| Msa0547760 | AT2G24600.3 | 25.749 | 501 | 315 | 17 | 32 | 501 | 72 | 546 | 5.42e-38 | 148 |
| Msa0547760 | AT2G24600.4 | 25.749 | 501 | 315 | 17 | 32 | 501 | 72 | 546 | 5.42e-38 | 148 |
| Msa0547760 | AT1G34050.1 | 26.854 | 499 | 318 | 12 | 21 | 507 | 75 | 538 | 6.57e-38 | 147 |
| Msa0547760 | AT5G54710.1 | 25.775 | 516 | 323 | 13 | 32 | 523 | 103 | 582 | 1.85e-35 | 140 |
| Msa0547760 | AT5G54710.2 | 25.775 | 516 | 323 | 13 | 32 | 523 | 148 | 627 | 2.70e-35 | 140 |
| Msa0547760 | AT5G54710.2 | 27.155 | 232 | 156 | 3 | 94 | 323 | 5 | 225 | 5.42e-13 | 72.0 |
| Msa0547760 | AT5G54710.2 | 23.958 | 288 | 177 | 5 | 32 | 290 | 19 | 293 | 1.12e-12 | 71.2 |
| Msa0547760 | AT1G10340.1 | 23.985 | 517 | 297 | 13 | 72 | 501 | 39 | 546 | 5.23e-31 | 127 |
| Msa0547760 | AT1G10340.2 | 23.699 | 519 | 335 | 13 | 31 | 501 | 37 | 542 | 6.79e-31 | 127 |
| Msa0547760 | AT4G03500.1 | 24.910 | 554 | 329 | 16 | 3 | 486 | 63 | 599 | 2.54e-30 | 125 |
| Msa0547760 | AT4G03500.2 | 24.910 | 554 | 329 | 16 | 3 | 486 | 40 | 576 | 2.82e-30 | 125 |
| Msa0547760 | AT4G03500.3 | 24.910 | 554 | 329 | 16 | 3 | 486 | 40 | 576 | 2.82e-30 | 125 |
| Msa0547760 | AT1G03670.1 | 25.052 | 479 | 279 | 13 | 29 | 472 | 144 | 577 | 2.91e-27 | 116 |
| Msa0547760 | AT4G14390.1 | 26.279 | 430 | 266 | 10 | 33 | 428 | 168 | 580 | 8.45e-27 | 115 |
| Msa0547760 | AT4G14390.4 | 26.107 | 429 | 267 | 10 | 33 | 428 | 168 | 579 | 9.92e-27 | 115 |
| Msa0547760 | AT4G14390.2 | 26.107 | 429 | 267 | 10 | 33 | 428 | 149 | 560 | 1.19e-26 | 115 |
| Msa0547760 | AT4G03470.1 | 23.695 | 498 | 321 | 14 | 27 | 491 | 149 | 620 | 3.29e-25 | 110 |
| Msa0547760 | AT4G03460.1 | 24.508 | 457 | 273 | 14 | 32 | 429 | 81 | 524 | 1.63e-24 | 108 |
| Msa0547760 | AT4G03460.1 | 33.088 | 136 | 80 | 2 | 134 | 258 | 75 | 210 | 2.22e-12 | 70.1 |
| Msa0547760 | AT4G03480.2 | 26.234 | 385 | 222 | 9 | 67 | 429 | 309 | 653 | 7.14e-24 | 106 |
| Msa0547760 | AT4G03480.1 | 26.234 | 385 | 222 | 9 | 67 | 429 | 312 | 656 | 7.59e-24 | 106 |
| Msa0547760 | AT4G03460.2 | 23.888 | 427 | 258 | 12 | 62 | 429 | 74 | 492 | 1.12e-23 | 105 |
| Msa0547760 | AT5G50140.1 | 23.846 | 520 | 307 | 17 | 27 | 517 | 57 | 516 | 6.93e-23 | 102 |
| Msa0547760 | AT5G50140.1 | 24.815 | 270 | 179 | 6 | 80 | 331 | 6 | 269 | 1.00e-14 | 77.4 |
| Msa0547760 | AT2G24600.2 | 26.463 | 393 | 241 | 14 | 32 | 399 | 72 | 441 | 7.97e-23 | 102 |
| Msa0547760 | AT2G24600.1 | 26.463 | 393 | 241 | 14 | 32 | 399 | 72 | 441 | 7.97e-23 | 102 |
| Msa0547760 | AT5G54700.2 | 26.409 | 337 | 176 | 9 | 165 | 486 | 23 | 302 | 2.67e-22 | 99.0 |
| Msa0547760 | AT4G05040.3 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.3 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.2 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.2 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.5 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.5 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.4 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.4 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.1 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.1 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.6 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.6 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G05040.7 | 25.293 | 427 | 281 | 10 | 30 | 429 | 148 | 563 | 3.72e-22 | 100 |
| Msa0547760 | AT4G05040.7 | 28.161 | 174 | 110 | 3 | 140 | 298 | 82 | 255 | 6.87e-11 | 65.5 |
| Msa0547760 | AT4G10720.2 | 26.488 | 336 | 203 | 9 | 109 | 427 | 41 | 349 | 4.72e-22 | 99.0 |
| Msa0547760 | AT4G10720.1 | 27.645 | 293 | 174 | 7 | 109 | 384 | 41 | 312 | 8.63e-22 | 98.6 |
| Msa0547760 | AT4G14390.3 | 25.521 | 384 | 242 | 9 | 33 | 383 | 149 | 521 | 3.38e-19 | 91.3 |
| Msa0547760 | AT4G03490.2 | 21.315 | 502 | 285 | 14 | 62 | 500 | 64 | 518 | 6.84e-19 | 90.9 |
| Msa0547760 | AT5G54700.1 | 24.927 | 341 | 197 | 9 | 170 | 486 | 34 | 339 | 6.97e-19 | 90.1 |
| Msa0547760 | AT4G14400.2 | 23.841 | 453 | 255 | 10 | 33 | 429 | 71 | 489 | 9.98e-19 | 90.1 |
| Msa0547760 | AT4G14400.3 | 23.841 | 453 | 255 | 10 | 33 | 429 | 71 | 489 | 9.98e-19 | 90.1 |
| Msa0547760 | AT5G51160.1 | 25.135 | 370 | 219 | 11 | 135 | 461 | 43 | 397 | 1.03e-18 | 89.4 |
| Msa0547760 | AT4G03490.4 | 21.748 | 515 | 305 | 14 | 62 | 500 | 84 | 576 | 1.08e-18 | 90.1 |
| Msa0547760 | AT4G03490.3 | 21.748 | 515 | 305 | 14 | 62 | 500 | 84 | 576 | 1.13e-18 | 90.1 |
| Msa0547760 | AT4G14400.1 | 23.841 | 453 | 255 | 10 | 33 | 429 | 137 | 555 | 1.18e-18 | 90.1 |
| Msa0547760 | AT4G03490.5 | 21.748 | 515 | 305 | 14 | 62 | 500 | 74 | 566 | 1.21e-18 | 90.1 |
| Msa0547760 | AT4G03490.1 | 21.315 | 502 | 285 | 14 | 62 | 500 | 74 | 528 | 1.30e-18 | 90.1 |
| Msa0547760 | AT4G03440.2 | 25.464 | 377 | 238 | 13 | 67 | 429 | 262 | 609 | 1.91e-17 | 86.3 |
| Msa0547760 | AT4G03440.3 | 25.464 | 377 | 238 | 13 | 67 | 429 | 262 | 609 | 1.91e-17 | 86.3 |
| Msa0547760 | AT4G03440.1 | 25.464 | 377 | 238 | 13 | 67 | 429 | 269 | 616 | 1.96e-17 | 86.3 |
| Msa0547760 | AT4G03450.2 | 24.851 | 503 | 268 | 17 | 27 | 468 | 101 | 554 | 6.70e-17 | 84.3 |
| Msa0547760 | AT4G03450.2 | 24.176 | 273 | 184 | 6 | 35 | 290 | 40 | 306 | 2.61e-11 | 66.6 |
| Msa0547760 | AT5G15500.2 | 25.526 | 333 | 176 | 7 | 108 | 388 | 5 | 317 | 8.16e-17 | 83.6 |
| Msa0547760 | AT4G03450.1 | 24.851 | 503 | 268 | 17 | 27 | 468 | 101 | 554 | 8.25e-17 | 84.3 |
| Msa0547760 | AT4G03450.1 | 24.176 | 273 | 184 | 6 | 35 | 290 | 40 | 306 | 2.94e-11 | 66.6 |
| Msa0547760 | AT2G03430.1 | 32.353 | 204 | 131 | 6 | 56 | 257 | 33 | 231 | 1.48e-15 | 77.0 |
| Msa0547760 | AT2G03430.1 | 34.759 | 187 | 109 | 7 | 64 | 245 | 8 | 186 | 4.47e-13 | 69.7 |
| Msa0547760 | AT2G03430.1 | 31.818 | 198 | 119 | 9 | 109 | 298 | 16 | 205 | 3.09e-11 | 64.3 |
| Msa0547760 | AT3G04140.1 | 26.480 | 321 | 193 | 11 | 35 | 316 | 106 | 422 | 2.53e-15 | 79.7 |
| Msa0547760 | AT3G04140.1 | 31.034 | 203 | 119 | 4 | 100 | 281 | 97 | 299 | 3.58e-14 | 75.9 |
| Msa0547760 | AT3G01750.2 | 27.419 | 248 | 139 | 7 | 35 | 248 | 109 | 349 | 3.75e-14 | 75.9 |
| Msa0547760 | AT3G01750.1 | 27.419 | 248 | 139 | 7 | 35 | 248 | 109 | 349 | 3.75e-14 | 75.9 |
| Msa0547760 | AT1G14500.1 | 24.255 | 235 | 159 | 4 | 109 | 326 | 41 | 273 | 1.46e-12 | 70.1 |
| Msa0547760 | AT1G14500.1 | 27.922 | 154 | 107 | 3 | 112 | 262 | 8 | 160 | 1.14e-11 | 67.4 |
| Msa0547760 | AT5G57740.1 | 28.378 | 222 | 120 | 6 | 109 | 294 | 55 | 273 | 1.46e-12 | 70.5 |
| Msa0547760 | AT5G54620.1 | 28.182 | 220 | 142 | 5 | 109 | 313 | 41 | 259 | 1.92e-12 | 69.7 |
| Msa0547760 | AT5G54620.1 | 28.188 | 149 | 105 | 1 | 116 | 262 | 12 | 160 | 9.27e-12 | 67.8 |
| Msa0547760 | AT2G28840.1 | 29.940 | 167 | 102 | 4 | 109 | 261 | 50 | 215 | 2.03e-12 | 69.7 |
| Msa0547760 | AT4G19150.1 | 35.833 | 120 | 75 | 2 | 109 | 228 | 20 | 137 | 2.41e-12 | 67.4 |
| Msa0547760 | AT2G26650.1 | 34.395 | 157 | 97 | 5 | 104 | 260 | 550 | 700 | 5.58e-12 | 69.3 |
| Msa0547760 | AT2G26650.2 | 34.395 | 157 | 97 | 5 | 104 | 260 | 445 | 595 | 6.22e-12 | 68.9 |
| Msa0547760 | AT3G04710.3 | 28.571 | 287 | 185 | 8 | 10 | 294 | 227 | 495 | 1.07e-11 | 68.2 |
| Msa0547760 | AT3G04710.1 | 28.571 | 287 | 185 | 8 | 10 | 294 | 3 | 271 | 1.48e-11 | 67.0 |
| Msa0547760 | AT3G04710.2 | 28.349 | 321 | 165 | 14 | 10 | 321 | 3 | 267 | 3.47e-11 | 65.9 |
| Msa0547760 | AT2G25600.1 | 29.268 | 205 | 135 | 7 | 112 | 314 | 552 | 748 | 5.32e-11 | 65.9 |
Find 130 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGGGGTAACTATTAT+TGG | 0.156648 | 4_1:-41121644 | Msa0547760:CDS |
| CATTGGGTACTATGAGTTAT+TGG | 0.186716 | 4_1:-41121601 | Msa0547760:CDS |
| TTCTTCCTTTGAGCCCTTAC+TGG | 0.196107 | 4_1:+41124388 | None:intergenic |
| CTATGAGTTATTGGGTTATT+AGG | 0.231803 | 4_1:-41121592 | Msa0547760:CDS |
| TACCTGAGTTCTTCCCTTCC+TGG | 0.243726 | 4_1:+41123126 | None:intergenic |
| TTTCCTGGAGGTATGTGTTT+TGG | 0.248926 | 4_1:+41121914 | None:intergenic |
| GCTGCTAAACAAGGGGATTT+AGG | 0.260704 | 4_1:-41124094 | Msa0547760:intron |
| TCAACCATGTTTATTGTTGA+TGG | 0.260913 | 4_1:+41123181 | None:intergenic |
| ACCCAATGTTGTAGCCATTA+TGG | 0.293380 | 4_1:+41121616 | None:intergenic |
| TGTAACGCGGACTGATAAAA+AGG | 0.298877 | 4_1:-41123275 | Msa0547760:CDS |
| CTTTATGTTGCTGCTGAGTA+TGG | 0.312082 | 4_1:-41124208 | Msa0547760:CDS |
| ACAAAAGGAGTTCATTAGTT+TGG | 0.318182 | 4_1:-41124463 | Msa0547760:five_prime_UTR |
| AGATATTGTAAAGATCTTAA+TGG | 0.322743 | 4_1:-41123518 | Msa0547760:CDS |
| CAATTGGGGTAACTATTATT+GGG | 0.329062 | 4_1:-41121643 | Msa0547760:CDS |
| ATGGTTATGTTGATATGGTT+AGG | 0.342881 | 4_1:-41124189 | Msa0547760:CDS |
| AATAAACATGGTTGATAGTA+AGG | 0.352466 | 4_1:-41123173 | Msa0547760:CDS |
| TTGCATTCTGCTGCAAGAAA+TGG | 0.353298 | 4_1:-41123343 | Msa0547760:CDS |
| AAACAAAGGTGGCTTGCAAT+TGG | 0.357257 | 4_1:-41121659 | Msa0547760:CDS |
| AACAAAGGTGGCTTGCAATT+GGG | 0.360089 | 4_1:-41121658 | Msa0547760:CDS |
| ATTGGGTACTATGAGTTATT+GGG | 0.363533 | 4_1:-41121600 | Msa0547760:CDS |
| CAGATTATCAAGTTGATACT+TGG | 0.370218 | 4_1:-41122319 | Msa0547760:CDS |
| GTTTGGTGAATTGTATTCAA+TGG | 0.375228 | 4_1:-41124446 | Msa0547760:exon |
| TGAGTATGGTTATGTTGATA+TGG | 0.383585 | 4_1:-41124194 | Msa0547760:CDS |
| AGGGAACATGGCTTCTTTGA+AGG | 0.397501 | 4_1:-41124305 | Msa0547760:CDS |
| CAAACACGAAGAAGCGTTCA+AGG | 0.397506 | 4_1:-41122073 | Msa0547760:CDS |
| TGCTGCAAGAAATGGACATT+TGG | 0.400973 | 4_1:-41123335 | Msa0547760:CDS |
| TATTATTGGGACTACCATAA+TGG | 0.409865 | 4_1:-41121630 | Msa0547760:CDS |
| CGATGATACGCCTTTACATT+CGG | 0.410988 | 4_1:-41124338 | Msa0547760:CDS |
| TTCAGTTTCCATGTCTTACA+TGG | 0.411173 | 4_1:-41125399 | None:intergenic |
| ACCATAATGGCTACAACATT+GGG | 0.411626 | 4_1:-41121617 | Msa0547760:CDS |
| TTTCATCTCCCTCGCGGTTG+TGG | 0.414269 | 4_1:-41121819 | Msa0547760:CDS |
| TACCATAATGGCTACAACAT+TGG | 0.414943 | 4_1:-41121618 | Msa0547760:CDS |
| GGATCGTCCACGAATTGGCC+TGG | 0.416257 | 4_1:+41121935 | None:intergenic |
| TCTTTGAAGGATACAGTTGA+TGG | 0.424259 | 4_1:-41124292 | Msa0547760:CDS |
| TTACATTCGGCAGCAAGAGC+AGG | 0.429178 | 4_1:-41124325 | Msa0547760:CDS |
| GCTGGAATTAAAGCAAGAAA+TGG | 0.432637 | 4_1:-41124136 | Msa0547760:CDS |
| AGCCTCAGGCTGCACCAGTA+AGG | 0.434924 | 4_1:-41124402 | Msa0547760:CDS |
| TATTATGATCTTGCTGATGC+TGG | 0.442983 | 4_1:-41124154 | Msa0547760:CDS |
| GCAGCCATCTTCACCGTCCC+AGG | 0.449913 | 4_1:-41121953 | Msa0547760:CDS |
| TTTAGTGGAACACACAAGTA+AGG | 0.450272 | 4_1:-41124863 | Msa0547760:intron |
| AACTGAAACTGTGCAGCCTC+AGG | 0.457584 | 4_1:-41124416 | Msa0547760:CDS |
| TGGTTATGTTGATATGGTTA+GGG | 0.459988 | 4_1:-41124188 | Msa0547760:CDS |
| GGCGCTTCACATGGCTGTGA+AGG | 0.462145 | 4_1:-41123245 | Msa0547760:CDS |
| TTAGACACAGCGGAGAAAAC+AGG | 0.464410 | 4_1:-41122247 | Msa0547760:CDS |
| AGTATTCATCGTGTTTGATT+CGG | 0.466809 | 4_1:-41121849 | Msa0547760:CDS |
| ACAAAGGTGGCTTGCAATTG+GGG | 0.480789 | 4_1:-41121657 | Msa0547760:CDS |
| ATTGAAGTAATAAGAACAAA+AGG | 0.482250 | 4_1:-41124478 | Msa0547760:five_prime_UTR |
| GCGATTCTTGAGAAGGAGCC+AGG | 0.483357 | 4_1:-41123301 | Msa0547760:CDS |
| GAAAATCTTCAATGGGAAGT+AGG | 0.483651 | 4_1:-41121544 | Msa0547760:CDS |
| GCCTCAGGCTGCACCAGTAA+GGG | 0.485466 | 4_1:-41124401 | Msa0547760:CDS |
| GAGTATAAGAAAATCTTCAA+TGG | 0.486162 | 4_1:-41121552 | Msa0547760:CDS |
| GCAACAATTGCTAGAAGTAA+TGG | 0.488412 | 4_1:-41123376 | Msa0547760:CDS |
| GATCGTCCACGAATTGGCCT+GGG | 0.491991 | 4_1:+41121936 | None:intergenic |
| AGTATAAGAAAATCTTCAAT+GGG | 0.497524 | 4_1:-41121551 | Msa0547760:CDS |
| TCAGATATACATGCACCAAC+AGG | 0.503945 | 4_1:+41125220 | None:intergenic |
| AAGCAAGTGTTGTGAAGTAG+TGG | 0.505499 | 4_1:+41125330 | None:intergenic |
| TTAGGCATAGAATCAATTTG+AGG | 0.507230 | 4_1:-41121574 | Msa0547760:CDS |
| CTTCATATTGCTGCTAAACA+AGG | 0.509684 | 4_1:-41124103 | Msa0547760:CDS |
| GTGAAATATCTATTAGAAGC+AGG | 0.514806 | 4_1:-41123409 | Msa0547760:CDS |
| AAAATGACGAAACAATTGAC+GGG | 0.518046 | 4_1:-41124367 | Msa0547760:CDS |
| CATCTCCCTCGCGGTTGTGG+TGG | 0.520207 | 4_1:-41121816 | Msa0547760:CDS |
| CACCGTCCCAGGCCAATTCG+TGG | 0.520703 | 4_1:-41121942 | Msa0547760:CDS |
| ATGCACCAACAGGAAACAAA+AGG | 0.529042 | 4_1:+41125230 | None:intergenic |
| TTGGCCTGGGACGGTGAAGA+TGG | 0.531539 | 4_1:+41121949 | None:intergenic |
| CGAAAGCAACCGTTGCTATG+AGG | 0.535432 | 4_1:+41121975 | None:intergenic |
| CTTGGACAAAGTGAAACAAA+TGG | 0.535956 | 4_1:-41122301 | Msa0547760:CDS |
| AGGGAACTAATATGTGATGT+TGG | 0.536320 | 4_1:+41124914 | None:intergenic |
| GCGCTTCACATGGCTGTGAA+GGG | 0.537881 | 4_1:-41123244 | Msa0547760:CDS |
| TGCAAGAAATGGACATTTGG+AGG | 0.543958 | 4_1:-41123332 | Msa0547760:CDS |
| CAAAGCAAAGAAGCAAATGA+TGG | 0.544079 | 4_1:-41121765 | Msa0547760:CDS |
| GCTCTTGCTGCCGAATGTAA+AGG | 0.544390 | 4_1:+41124328 | None:intergenic |
| TTTGACGAGTGTGTTCTAGT+TGG | 0.546084 | 4_1:+41122092 | None:intergenic |
| TCAGTCCGCGTTACAACACC+TGG | 0.546749 | 4_1:+41123283 | None:intergenic |
| GCCCTTACTGGTGCAGCCTG+AGG | 0.548134 | 4_1:+41124400 | None:intergenic |
| TACAGTTGATGGTGCTGAAG+AGG | 0.548363 | 4_1:-41124281 | Msa0547760:CDS |
| TTGTGTTGCAGCAGTGTGCA+AGG | 0.551289 | 4_1:+41123447 | None:intergenic |
| TACATTCGGCAGCAAGAGCA+GGG | 0.554949 | 4_1:-41124324 | Msa0547760:CDS |
| GGCAGCAAGAGCAGGGAACA+TGG | 0.558342 | 4_1:-41124317 | Msa0547760:CDS |
| CGCTTCACATGGCTGTGAAG+GGG | 0.560548 | 4_1:-41123243 | Msa0547760:CDS |
| GAAAATGACGAAACAATTGA+CGG | 0.563779 | 4_1:-41124368 | Msa0547760:CDS |
| TGTGAAAGCGATTCTTGAGA+AGG | 0.565310 | 4_1:-41123308 | Msa0547760:CDS |
| GCAGAGTCTTGTGGTAGTAG+AGG | 0.567525 | 4_1:-41123221 | Msa0547760:CDS |
| AGCAAGTGTTGTGAAGTAGT+GGG | 0.567960 | 4_1:+41125331 | None:intergenic |
| ATTAGAAGCAGGTAGTAGCT+TGG | 0.570550 | 4_1:-41123398 | Msa0547760:CDS |
| CTGCACCAGTAAGGGCTCAA+AGG | 0.574302 | 4_1:-41124393 | Msa0547760:CDS |
| GAGGACCGCGACGACTGTTG+TGG | 0.574532 | 4_1:+41121994 | None:intergenic |
| TTCATATTGCTGCTAAACAA+GGG | 0.576566 | 4_1:-41124102 | Msa0547760:CDS |
| ACAGTTGATGGTGCTGAAGA+GGG | 0.580772 | 4_1:-41124280 | Msa0547760:CDS |
| TGCAAGGCTGTTGTGTTGGA+CGG | 0.580949 | 4_1:+41123463 | None:intergenic |
| ATATTTGCAAAGCAGAATCA+AGG | 0.582207 | 4_1:-41124244 | Msa0547760:CDS |
| AACCAGGAAGGGAAGAACTC+AGG | 0.589165 | 4_1:-41123128 | Msa0547760:intron |
| CTCAACAAAATGCACACAGA+AGG | 0.589714 | 4_1:-41122037 | Msa0547760:CDS |
| TTGCACACTGCTGCAACACA+AGG | 0.589896 | 4_1:-41123445 | Msa0547760:CDS |
| TCAGTTTCCATGTCTTACAT+GGG | 0.591587 | 4_1:-41125398 | None:intergenic |
| GGCATGGCAGTAAACAAAAG+TGG | 0.596158 | 4_1:-41122280 | Msa0547760:CDS |
| ATAAACATGGTTGATAGTAA+GGG | 0.597928 | 4_1:-41123172 | Msa0547760:CDS |
| GGGACAGACGGCGCTTCACA+TGG | 0.602708 | 4_1:-41123254 | Msa0547760:CDS |
| CTTCAATGGGAAGTAGGTCA+AGG | 0.604224 | 4_1:-41121538 | Msa0547760:CDS |
| ATACCTCCAGGAAAATCCCT+TGG | 0.605699 | 4_1:-41121905 | Msa0547760:CDS |
| GAGTGTGTTCTAGTTGGTGA+TGG | 0.607313 | 4_1:+41122098 | None:intergenic |
| GATCCAAAACACATACCTCC+AGG | 0.610901 | 4_1:-41121917 | Msa0547760:CDS |
| AATTGCACAATGGAAAAGAG+TGG | 0.611330 | 4_1:+41121406 | None:intergenic |
| TCATATTGCTGCTAAACAAG+GGG | 0.612141 | 4_1:-41124101 | Msa0547760:CDS |
| TTGCATATAGCAACCAGGAA+GGG | 0.612446 | 4_1:-41123139 | Msa0547760:CDS |
| CTAATATGTGATGTTGGTGT+AGG | 0.615558 | 4_1:+41124920 | None:intergenic |
| CAGCGTTGCATATAGCAACC+AGG | 0.616173 | 4_1:-41123144 | Msa0547760:CDS |
| TGTGAAGGGGCAGAGTCTTG+TGG | 0.617503 | 4_1:-41123230 | Msa0547760:CDS |
| TTCTGAATTGTCAATGACTG+TGG | 0.617789 | 4_1:-41123488 | Msa0547760:CDS |
| CACGATGAATACTAGAAACG+CGG | 0.624298 | 4_1:+41121859 | None:intergenic |
| GCAAGTGTTGTGAAGTAGTG+GGG | 0.625343 | 4_1:+41125332 | None:intergenic |
| TGAATTGTATTCAATGGACA+CGG | 0.625523 | 4_1:-41124440 | Msa0547760:exon |
| GTTGCATATAGCAACCAGGA+AGG | 0.628632 | 4_1:-41123140 | Msa0547760:CDS |
| ACAAAGTGAAACAAATGGCA+TGG | 0.631554 | 4_1:-41122296 | Msa0547760:CDS |
| TATGTGAATAAATTGCACAA+TGG | 0.635969 | 4_1:+41121396 | None:intergenic |
| GTCCACGAATTGGCCTGGGA+CGG | 0.639953 | 4_1:+41121940 | None:intergenic |
| AGTGTGCAAGGCTGTTGTGT+TGG | 0.641164 | 4_1:+41123459 | None:intergenic |
| CTATTATTAACAAACTAATG+TGG | 0.644964 | 4_1:-41121742 | Msa0547760:CDS |
| CAAGTGTTGTGAAGTAGTGG+GGG | 0.647416 | 4_1:+41125333 | None:intergenic |
| AAAAGCATTCTTACAGAACA+CGG | 0.650500 | 4_1:-41122211 | Msa0547760:CDS |
| CGTCGCGGTCCTCATAGCAA+CGG | 0.655824 | 4_1:-41121984 | Msa0547760:CDS |
| AGATCCATCAACAATAAACA+TGG | 0.658313 | 4_1:-41123185 | Msa0547760:CDS |
| AGGAGCCAGGTGTTGTAACG+CGG | 0.665895 | 4_1:-41123288 | Msa0547760:CDS |
| TTGAACCACCACAACCGCGA+GGG | 0.673202 | 4_1:+41121811 | None:intergenic |
| ACGATGAATACTAGAAACGC+GGG | 0.673783 | 4_1:+41121860 | None:intergenic |
| TTTGCAAAGCAGAATCAAGG+TGG | 0.681219 | 4_1:-41124241 | Msa0547760:CDS |
| AGAAAGGCAGAGTTATCACA+AGG | 0.686281 | 4_1:-41124668 | Msa0547760:five_prime_UTR |
| AAACTCCACAACAGTCGTCG+CGG | 0.698686 | 4_1:-41121999 | Msa0547760:CDS |
| AAATGACGAAACAATTGACG+GGG | 0.710948 | 4_1:-41124366 | Msa0547760:CDS |
| TTTGAACCACCACAACCGCG+AGG | 0.726688 | 4_1:+41121810 | None:intergenic |
| CGAAACAGCATTAGACACAG+CGG | 0.776505 | 4_1:-41122257 | Msa0547760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTAAATATTTTTACTATAT+TGG | - | chr4_1:41121760-41121779 | Msa0547760:CDS | 10.0% |
| !!! | TTATTTTTTTTTTTTGTTAC+AGG | - | chr4_1:41121847-41121866 | Msa0547760:CDS | 10.0% |
| !!! | TATTTTTTTTTTTTGTTACA+GGG | - | chr4_1:41121848-41121867 | Msa0547760:CDS | 10.0% |
| !! | AGTAAAAATATTTAGAAGAA+AGG | + | chr4_1:41121756-41121775 | None:intergenic | 15.0% |
| !! | ATATTAAATATACTCCTATA+TGG | + | chr4_1:41121820-41121839 | None:intergenic | 15.0% |
| !! | TCAGTGAAAAAATAAATAAA+AGG | + | chr4_1:41121974-41121993 | None:intergenic | 15.0% |
| !!! | TTTTGTATTTTTGTTTTTGT+TGG | - | chr4_1:41122257-41122276 | Msa0547760:CDS | 15.0% |
| !!! | AATCTTGATATTTTAAATTG+CGG | - | chr4_1:41122795-41122814 | Msa0547760:intron | 15.0% |
| !! | TTAATTCAATCCTAAAAAAT+TGG | - | chr4_1:41124017-41124036 | Msa0547760:intron | 15.0% |
| !!! | TAAAAAAGCATTGAGATTTA+AGG | + | chr4_1:41121915-41121934 | None:intergenic | 20.0% |
| !! | ATTGAAGTAATAAGAACAAA+AGG | - | chr4_1:41122316-41122335 | Msa0547760:CDS | 20.0% |
| !!! | CATTTCTATTATTCAAGTTT+AGG | + | chr4_1:41123137-41123156 | None:intergenic | 20.0% |
| !!! | TATCTATTTTATTTTGAACC+AGG | - | chr4_1:41123226-41123245 | Msa0547760:CDS | 20.0% |
| !!! | ATCTATTTTATTTTGAACCA+GGG | - | chr4_1:41123227-41123246 | Msa0547760:CDS | 20.0% |
| !! | AGATATTGTAAAGATCTTAA+TGG | - | chr4_1:41123276-41123295 | Msa0547760:CDS | 20.0% |
| !!! | ACGTTATAAACCAATTTTTT+AGG | + | chr4_1:41124030-41124049 | None:intergenic | 20.0% |
| !! | ATACAATTCAATTATGCATA+AGG | + | chr4_1:41124380-41124399 | None:intergenic | 20.0% |
| !! | CTATTATTAACAAACTAATG+TGG | - | chr4_1:41125052-41125071 | Msa0547760:intron | 20.0% |
| !! | AGTATAAGAAAATCTTCAAT+GGG | - | chr4_1:41125243-41125262 | Msa0547760:five_prime_UTR | 20.0% |
| ! | AAGAAGAAAAAGAACAAAAG+AGG | + | chr4_1:41121725-41121744 | None:intergenic | 25.0% |
| !! | AGATTTAAGGATAGCTTTTA+GGG | + | chr4_1:41121902-41121921 | None:intergenic | 25.0% |
| !!! | AAATCTCAATGCTTTTTTAG+TGG | - | chr4_1:41121916-41121935 | Msa0547760:CDS | 25.0% |
| ! | TTATTATGATGAATGCTCAA+AGG | - | chr4_1:41121995-41122014 | Msa0547760:CDS | 25.0% |
| ! | TAAGAGAAAAAAACCAATGA+TGG | + | chr4_1:41122029-41122048 | None:intergenic | 25.0% |
| !! | TTTTATCAGAGCAATGATTT+TGG | - | chr4_1:41122103-41122122 | Msa0547760:CDS | 25.0% |
| !!! | ATCTTCTTTGATTTGTTTCA+AGG | - | chr4_1:41122196-41122215 | Msa0547760:CDS | 25.0% |
| ! | AAAATTCTATGACTGCAATT+TGG | + | chr4_1:41122927-41122946 | None:intergenic | 25.0% |
| !!! | TTTTAAAAGAAAACCTTGAG+TGG | - | chr4_1:41122945-41122964 | Msa0547760:intron | 25.0% |
| ! | CAACTTGTGTTTATTTACTA+CGG | + | chr4_1:41123103-41123122 | None:intergenic | 25.0% |
| ! | AATAATAGAAATGTGTTGCA+AGG | - | chr4_1:41123144-41123163 | Msa0547760:CDS | 25.0% |
| ! | AACAAGATTTGATCAATGTT+CGG | + | chr4_1:41123179-41123198 | None:intergenic | 25.0% |
| ! | AACATTGATCAAATCTTGTT+TGG | - | chr4_1:41123179-41123198 | Msa0547760:CDS | 25.0% |
| !!! | AATAAACATGGTTGATAGTA+AGG | - | chr4_1:41123621-41123640 | Msa0547760:intron | 25.0% |
| !!! | ATAAACATGGTTGATAGTAA+GGG | - | chr4_1:41123622-41123641 | Msa0547760:intron | 25.0% |
| ! | CTTTGAACAAAGATAAAGAA+GGG | + | chr4_1:41123881-41123900 | None:intergenic | 25.0% |
| ! | ACTTTGAACAAAGATAAAGA+AGG | + | chr4_1:41123882-41123901 | None:intergenic | 25.0% |
| ! | TATGTGAATAATGTGTTAGA+TGG | - | chr4_1:41123951-41123970 | Msa0547760:intron | 25.0% |
| ! | AATCTGAACAGAGTTTATAA+AGG | + | chr4_1:41124062-41124081 | None:intergenic | 25.0% |
| ! | ACTGTTAATGTAAAGAACAT+AGG | - | chr4_1:41124184-41124203 | Msa0547760:CDS | 25.0% |
| ! | TTGAATTGTATCTACCTATT+TGG | - | chr4_1:41124389-41124408 | Msa0547760:CDS | 25.0% |
| !! | AATTAACCTCTATCAACTTT+TGG | - | chr4_1:41124447-41124466 | Msa0547760:exon | 25.0% |
| ! | GAGTATAAGAAAATCTTCAA+TGG | - | chr4_1:41125242-41125261 | Msa0547760:five_prime_UTR | 25.0% |
| TATGAAAAAACACGATGAGA+GGG | + | chr4_1:41121423-41121442 | None:intergenic | 30.0% | |
| TTATGAAAAAACACGATGAG+AGG | + | chr4_1:41121424-41121443 | None:intergenic | 30.0% | |
| ! | ACTTTCTTTTTGCACCATAT+AGG | - | chr4_1:41121803-41121822 | Msa0547760:CDS | 30.0% |
| ! | GAGATTTAAGGATAGCTTTT+AGG | + | chr4_1:41121903-41121922 | None:intergenic | 30.0% |
| !!! | AAAGGTTTTGAATCCATCAT+TGG | - | chr4_1:41122013-41122032 | Msa0547760:CDS | 30.0% |
| ACAAAAGGAGTTCATTAGTT+TGG | - | chr4_1:41122331-41122350 | Msa0547760:intron | 30.0% | |
| ! | GTTTGGTGAATTGTATTCAA+TGG | - | chr4_1:41122348-41122367 | Msa0547760:intron | 30.0% |
| TGAATTGTATTCAATGGACA+CGG | - | chr4_1:41122354-41122373 | Msa0547760:intron | 30.0% | |
| GAAAATGACGAAACAATTGA+CGG | - | chr4_1:41122426-41122445 | Msa0547760:intron | 30.0% | |
| AAAATGACGAAACAATTGAC+GGG | - | chr4_1:41122427-41122446 | Msa0547760:intron | 30.0% | |
| ATATTTGCAAAGCAGAATCA+AGG | - | chr4_1:41122550-41122569 | Msa0547760:intron | 30.0% | |
| TGAGTATGGTTATGTTGATA+TGG | - | chr4_1:41122600-41122619 | Msa0547760:intron | 30.0% | |
| ATGGTTATGTTGATATGGTT+AGG | - | chr4_1:41122605-41122624 | Msa0547760:intron | 30.0% | |
| TGGTTATGTTGATATGGTTA+GGG | - | chr4_1:41122606-41122625 | Msa0547760:intron | 30.0% | |
| TTCATATTGCTGCTAAACAA+GGG | - | chr4_1:41122692-41122711 | Msa0547760:intron | 30.0% | |
| ! | GTTCTTTTGTGTTTTGTGAA+AGG | - | chr4_1:41122760-41122779 | Msa0547760:intron | 30.0% |
| AATCTCAGTTCTGTTGTTAT+TGG | - | chr4_1:41123028-41123047 | Msa0547760:intron | 30.0% | |
| AACCTATTCACTTATCAGTA+AGG | + | chr4_1:41123059-41123078 | None:intergenic | 30.0% | |
| ! | TTACTACGGTTTAGTTTACA+AGG | + | chr4_1:41123089-41123108 | None:intergenic | 30.0% |
| GTGAAATATCTATTAGAAGC+AGG | - | chr4_1:41123385-41123404 | Msa0547760:CDS | 30.0% | |
| AGATCCATCAACAATAAACA+TGG | - | chr4_1:41123609-41123628 | Msa0547760:intron | 30.0% | |
| TCAACCATGTTTATTGTTGA+TGG | + | chr4_1:41123616-41123635 | None:intergenic | 30.0% | |
| AACTCAGGTAAATTTGACTA+TGG | - | chr4_1:41123681-41123700 | Msa0547760:intron | 30.0% | |
| GACATGTTTATCAACAAAGA+TGG | + | chr4_1:41123792-41123811 | None:intergenic | 30.0% | |
| CATGTCGTCACTTAAAATTT+CGG | - | chr4_1:41123806-41123825 | Msa0547760:intron | 30.0% | |
| CTATGAAGTACAAACACTTA+CGG | + | chr4_1:41124278-41124297 | None:intergenic | 30.0% | |
| !! | CAGATTATCAAGTTGATACT+TGG | - | chr4_1:41124475-41124494 | Msa0547760:five_prime_UTR | 30.0% |
| !! | AAAAGCATTCTTACAGAACA+CGG | - | chr4_1:41124583-41124602 | Msa0547760:intron | 30.0% |
| ! | TGTTTTCGGTTGAGATTTTA+TGG | + | chr4_1:41124626-41124645 | None:intergenic | 30.0% |
| AGTATTCATCGTGTTTGATT+CGG | - | chr4_1:41124945-41124964 | Msa0547760:intron | 30.0% | |
| !!! | GCTTATTTCTGTGTCATTTT+TGG | - | chr4_1:41125086-41125105 | Msa0547760:intron | 30.0% |
| !!! | GCTTTGTCTTTTTTAGTTGT+GGG | - | chr4_1:41125108-41125127 | Msa0547760:intron | 30.0% |
| !!! | CTTTGTCTTTTTTAGTTGTG+GGG | - | chr4_1:41125109-41125128 | Msa0547760:intron | 30.0% |
| CAATTGGGGTAACTATTATT+GGG | - | chr4_1:41125151-41125170 | Msa0547760:five_prime_UTR | 30.0% | |
| TATTATTGGGACTACCATAA+TGG | - | chr4_1:41125164-41125183 | Msa0547760:five_prime_UTR | 30.0% | |
| ATTGGGTACTATGAGTTATT+GGG | - | chr4_1:41125194-41125213 | Msa0547760:five_prime_UTR | 30.0% | |
| CTATGAGTTATTGGGTTATT+AGG | - | chr4_1:41125202-41125221 | Msa0547760:five_prime_UTR | 30.0% | |
| TTAGGCATAGAATCAATTTG+AGG | - | chr4_1:41125220-41125239 | Msa0547760:five_prime_UTR | 30.0% | |
| CTAATATGTGATGTTGGTGT+AGG | + | chr4_1:41121877-41121896 | None:intergenic | 35.0% | |
| AGGGAACTAATATGTGATGT+TGG | + | chr4_1:41121883-41121902 | None:intergenic | 35.0% | |
| TTTAGTGGAACACACAAGTA+AGG | - | chr4_1:41121931-41121950 | Msa0547760:CDS | 35.0% | |
| !! | AGAGCAATGATTTTGGAGAA+AGG | - | chr4_1:41122110-41122129 | Msa0547760:CDS | 35.0% |
| AAATGACGAAACAATTGACG+GGG | - | chr4_1:41122428-41122447 | Msa0547760:intron | 35.0% | |
| ! | TCTTTGAAGGATACAGTTGA+TGG | - | chr4_1:41122502-41122521 | Msa0547760:intron | 35.0% |
| TATTATGATCTTGCTGATGC+TGG | - | chr4_1:41122640-41122659 | Msa0547760:intron | 35.0% | |
| GCTGGAATTAAAGCAAGAAA+TGG | - | chr4_1:41122658-41122677 | Msa0547760:intron | 35.0% | |
| CTTCATATTGCTGCTAAACA+AGG | - | chr4_1:41122691-41122710 | Msa0547760:intron | 35.0% | |
| TCATATTGCTGCTAAACAAG+GGG | - | chr4_1:41122693-41122712 | Msa0547760:intron | 35.0% | |
| ACAAGGGGATTTAGGTATTA+TGG | - | chr4_1:41122708-41122727 | Msa0547760:intron | 35.0% | |
| TTTGTGAAAGGAGTAATGAG+TGG | - | chr4_1:41122772-41122791 | Msa0547760:intron | 35.0% | |
| TGTCTTCGCAATCATAATTG+AGG | + | chr4_1:41122882-41122901 | None:intergenic | 35.0% | |
| GTGTCATAAAAATCCACTCA+AGG | + | chr4_1:41122961-41122980 | None:intergenic | 35.0% | |
| AAAGCACAAAATGAGCAACT+TGG | + | chr4_1:41122983-41123002 | None:intergenic | 35.0% | |
| TGCCTTACTGATAAGTGAAT+AGG | - | chr4_1:41123054-41123073 | Msa0547760:intron | 35.0% | |
| AAACTGTTAGAACAAAACCC+TGG | + | chr4_1:41123247-41123266 | None:intergenic | 35.0% | |
| TTCTGAATTGTCAATGACTG+TGG | - | chr4_1:41123306-41123325 | Msa0547760:CDS | 35.0% | |
| GCAACAATTGCTAGAAGTAA+TGG | - | chr4_1:41123418-41123437 | Msa0547760:CDS | 35.0% | |
| AAGATAGTGTTCACAAGAAG+TGG | - | chr4_1:41123750-41123769 | Msa0547760:intron | 35.0% | |
| ATCTCACAAACTGTGTTTGT+AGG | + | chr4_1:41123848-41123867 | None:intergenic | 35.0% | |
| TCTTTGTTCAAAGTGTGACT+TGG | - | chr4_1:41123888-41123907 | Msa0547760:intron | 35.0% | |
| CTTTGTTCAAAGTGTGACTT+GGG | - | chr4_1:41123889-41123908 | Msa0547760:intron | 35.0% | |
| ! | GTATGTGTAAGGGGTATATA+GGG | + | chr4_1:41123916-41123935 | None:intergenic | 35.0% |
| !! | CCAATTTTGGTATGTGTAAG+GGG | + | chr4_1:41123925-41123944 | None:intergenic | 35.0% |
| !! | CCCAATTTTGGTATGTGTAA+GGG | + | chr4_1:41123926-41123945 | None:intergenic | 35.0% |
| CCCTTACACATACCAAAATT+GGG | - | chr4_1:41123923-41123942 | Msa0547760:intron | 35.0% | |
| TTGGTACTATCCTAGAACTT+GGG | - | chr4_1:41123988-41124007 | Msa0547760:intron | 35.0% | |
| AGTGCTTTGTAGGATAATAG+CGG | + | chr4_1:41124118-41124137 | None:intergenic | 35.0% | |
| TGTCAATGTCGTATATGTGT+CGG | + | chr4_1:41124145-41124164 | None:intergenic | 35.0% | |
| ATGTAAAGAACATAGGACAC+CGG | - | chr4_1:41124191-41124210 | Msa0547760:CDS | 35.0% | |
| TGAACTCGTATGATACCTAT+TGG | + | chr4_1:41124219-41124238 | None:intergenic | 35.0% | |
| GTACAAACACTTACGGAATT+AGG | + | chr4_1:41124271-41124290 | None:intergenic | 35.0% | |
| ACTTCATAGCTGCTAATTCT+TGG | - | chr4_1:41124289-41124308 | Msa0547760:CDS | 35.0% | |
| CTTCATAGCTGCTAATTCTT+GGG | - | chr4_1:41124290-41124309 | Msa0547760:CDS | 35.0% | |
| TTCATAGCTGCTAATTCTTG+GGG | - | chr4_1:41124291-41124310 | Msa0547760:CDS | 35.0% | |
| TACCTATTTGGATTAAGTGC+TGG | - | chr4_1:41124401-41124420 | Msa0547760:CDS | 35.0% | |
| ATCCAGCACTTAATCCAAAT+AGG | + | chr4_1:41124406-41124425 | None:intergenic | 35.0% | |
| !! | GATTAAGTGCTGGATTATTC+AGG | - | chr4_1:41124411-41124430 | Msa0547760:CDS | 35.0% |
| !! | GCATTTCCAAAAGTTGATAG+AGG | + | chr4_1:41124456-41124475 | None:intergenic | 35.0% |
| CTTGGACAAAGTGAAACAAA+TGG | - | chr4_1:41124493-41124512 | Msa0547760:five_prime_UTR | 35.0% | |
| ACAAAGTGAAACAAATGGCA+TGG | - | chr4_1:41124498-41124517 | Msa0547760:five_prime_UTR | 35.0% | |
| CAAAGCAAAGAAGCAAATGA+TGG | - | chr4_1:41125029-41125048 | Msa0547760:intron | 35.0% | |
| !!! | GGCTTTGTCTTTTTTAGTTG+TGG | - | chr4_1:41125107-41125126 | Msa0547760:intron | 35.0% |
| TAGTTGTGGGGAAAAAACAA+AGG | - | chr4_1:41125121-41125140 | Msa0547760:intron | 35.0% | |
| GCAATTGGGGTAACTATTAT+TGG | - | chr4_1:41125150-41125169 | Msa0547760:five_prime_UTR | 35.0% | |
| TACCATAATGGCTACAACAT+TGG | - | chr4_1:41125176-41125195 | Msa0547760:five_prime_UTR | 35.0% | |
| ACCATAATGGCTACAACATT+GGG | - | chr4_1:41125177-41125196 | Msa0547760:five_prime_UTR | 35.0% | |
| CATTGGGTACTATGAGTTAT+TGG | - | chr4_1:41125193-41125212 | Msa0547760:five_prime_UTR | 35.0% | |
| GAAAATCTTCAATGGGAAGT+AGG | - | chr4_1:41125250-41125269 | Msa0547760:five_prime_UTR | 35.0% | |
| ! | AGCAAGTGTTGTGAAGTAGT+GGG | + | chr4_1:41121466-41121485 | None:intergenic | 40.0% |
| ! | AAGCAAGTGTTGTGAAGTAG+TGG | + | chr4_1:41121467-41121486 | None:intergenic | 40.0% |
| !! | CACTACCTTTTGTTTCCTGT+TGG | - | chr4_1:41121559-41121578 | Msa0547760:CDS | 40.0% |
| ATGCACCAACAGGAAACAAA+AGG | + | chr4_1:41121567-41121586 | None:intergenic | 40.0% | |
| TCAGATATACATGCACCAAC+AGG | + | chr4_1:41121577-41121596 | None:intergenic | 40.0% | |
| AGAAAGGCAGAGTTATCACA+AGG | - | chr4_1:41122126-41122145 | Msa0547760:CDS | 40.0% | |
| CGATGATACGCCTTTACATT+CGG | - | chr4_1:41122456-41122475 | Msa0547760:intron | 40.0% | |
| TTTGCAAAGCAGAATCAAGG+TGG | - | chr4_1:41122553-41122572 | Msa0547760:intron | 40.0% | |
| CTTTATGTTGCTGCTGAGTA+TGG | - | chr4_1:41122586-41122605 | Msa0547760:intron | 40.0% | |
| ATTAGAAGCAGGTAGTAGCT+TGG | - | chr4_1:41123396-41123415 | Msa0547760:CDS | 40.0% | |
| TTGCATTCTGCTGCAAGAAA+TGG | - | chr4_1:41123451-41123470 | Msa0547760:CDS | 40.0% | |
| TGCTGCAAGAAATGGACATT+TGG | - | chr4_1:41123459-41123478 | Msa0547760:CDS | 40.0% | |
| TGCAAGAAATGGACATTTGG+AGG | - | chr4_1:41123462-41123481 | Msa0547760:CDS | 40.0% | |
| TGTGAAAGCGATTCTTGAGA+AGG | - | chr4_1:41123486-41123505 | Msa0547760:CDS | 40.0% | |
| ! | TGTAACGCGGACTGATAAAA+AGG | - | chr4_1:41123519-41123538 | Msa0547760:CDS | 40.0% |
| ! | GTAACGCGGACTGATAAAAA+GGG | - | chr4_1:41123520-41123539 | Msa0547760:intron | 40.0% |
| GACTGATAAAAAGGGACAGA+CGG | - | chr4_1:41123528-41123547 | Msa0547760:intron | 40.0% | |
| TTGCATATAGCAACCAGGAA+GGG | - | chr4_1:41123655-41123674 | Msa0547760:intron | 40.0% | |
| ! | GGTATGTGTAAGGGGTATAT+AGG | + | chr4_1:41123917-41123936 | None:intergenic | 40.0% |
| CCCCTTACACATACCAAAAT+TGG | - | chr4_1:41123922-41123941 | Msa0547760:intron | 40.0% | |
| !! | GCCCAATTTTGGTATGTGTA+AGG | + | chr4_1:41123927-41123946 | None:intergenic | 40.0% |
| ACACATACCAAAATTGGGCT+TGG | - | chr4_1:41123928-41123947 | Msa0547760:intron | 40.0% | |
| ! | TCACATACCAAGCCCAATTT+TGG | + | chr4_1:41123938-41123957 | None:intergenic | 40.0% |
| TGTTAGATGGCTTGATGAAC+AGG | - | chr4_1:41123964-41123983 | Msa0547760:intron | 40.0% | |
| CTTGGTACTATCCTAGAACT+TGG | - | chr4_1:41123987-41124006 | Msa0547760:intron | 40.0% | |
| TTAAGCACAACCCAAGTTCT+AGG | + | chr4_1:41124001-41124020 | None:intergenic | 40.0% | |
| TGCTTTGTAGGATAATAGCG+GGG | + | chr4_1:41124116-41124135 | None:intergenic | 40.0% | |
| GTGCTTTGTAGGATAATAGC+GGG | + | chr4_1:41124117-41124136 | None:intergenic | 40.0% | |
| !! | TCTCTTGTTGCAGCTGTTTT+CGG | + | chr4_1:41124640-41124659 | None:intergenic | 40.0% |
| TTTGACGAGTGTGTTCTAGT+TGG | + | chr4_1:41124705-41124724 | None:intergenic | 40.0% | |
| CTCAACAAAATGCACACAGA+AGG | - | chr4_1:41124757-41124776 | Msa0547760:intron | 40.0% | |
| !! | TTTCCTGGAGGTATGTGTTT+TGG | + | chr4_1:41124883-41124902 | None:intergenic | 40.0% |
| !!! | AGCTATTTTTGCTTCGCCAA+GGG | + | chr4_1:41124908-41124927 | None:intergenic | 40.0% |
| !!! | AAGCTATTTTTGCTTCGCCA+AGG | + | chr4_1:41124909-41124928 | None:intergenic | 40.0% |
| ACGATGAATACTAGAAACGC+GGG | + | chr4_1:41124937-41124956 | None:intergenic | 40.0% | |
| CACGATGAATACTAGAAACG+CGG | + | chr4_1:41124938-41124957 | None:intergenic | 40.0% | |
| TTGTGGGGAAAAAACAAAGG+TGG | - | chr4_1:41125124-41125143 | Msa0547760:intron | 40.0% | |
| ! | AAACAAAGGTGGCTTGCAAT+TGG | - | chr4_1:41125135-41125154 | Msa0547760:five_prime_UTR | 40.0% |
| ! | AACAAAGGTGGCTTGCAATT+GGG | - | chr4_1:41125136-41125155 | Msa0547760:five_prime_UTR | 40.0% |
| ACCCAATGTTGTAGCCATTA+TGG | + | chr4_1:41125181-41125200 | None:intergenic | 40.0% | |
| ! | CAAGTGTTGTGAAGTAGTGG+GGG | + | chr4_1:41121464-41121483 | None:intergenic | 45.0% |
| ! | GCAAGTGTTGTGAAGTAGTG+GGG | + | chr4_1:41121465-41121484 | None:intergenic | 45.0% |
| TTCTTCCTTTGAGCCCTTAC+TGG | + | chr4_1:41122409-41122428 | None:intergenic | 45.0% | |
| AGGGAACATGGCTTCTTTGA+AGG | - | chr4_1:41122489-41122508 | Msa0547760:intron | 45.0% | |
| !! | TACAGTTGATGGTGCTGAAG+AGG | - | chr4_1:41122513-41122532 | Msa0547760:intron | 45.0% |
| !! | ACAGTTGATGGTGCTGAAGA+GGG | - | chr4_1:41122514-41122533 | Msa0547760:intron | 45.0% |
| GCTGCTAAACAAGGGGATTT+AGG | - | chr4_1:41122700-41122719 | Msa0547760:intron | 45.0% | |
| TTGCGGTTGAAGTCATGTTG+CGG | - | chr4_1:41122812-41122831 | Msa0547760:intron | 45.0% | |
| GTTGCATATAGCAACCAGGA+AGG | - | chr4_1:41123654-41123673 | Msa0547760:intron | 45.0% | |
| CACAGTTTGTGAGATGTGAG+AGG | - | chr4_1:41123853-41123872 | Msa0547760:intron | 45.0% | |
| CGTATGATACCTATTGGTGC+CGG | + | chr4_1:41124213-41124232 | None:intergenic | 45.0% | |
| GGCATGGCAGTAAACAAAAG+TGG | - | chr4_1:41124514-41124533 | Msa0547760:intron | 45.0% | |
| CGAAACAGCATTAGACACAG+CGG | - | chr4_1:41124537-41124556 | Msa0547760:intron | 45.0% | |
| TTAGACACAGCGGAGAAAAC+AGG | - | chr4_1:41124547-41124566 | Msa0547760:intron | 45.0% | |
| !! | GAGTGTGTTCTAGTTGGTGA+TGG | + | chr4_1:41124699-41124718 | None:intergenic | 45.0% |
| !! | CAAACACGAAGAAGCGTTCA+AGG | - | chr4_1:41124721-41124740 | Msa0547760:intron | 45.0% |
| !! | GTTTTGGATCGTCCACGAAT+TGG | + | chr4_1:41124867-41124886 | None:intergenic | 45.0% |
| GATCCAAAACACATACCTCC+AGG | - | chr4_1:41124877-41124896 | Msa0547760:five_prime_UTR | 45.0% | |
| ATACCTCCAGGAAAATCCCT+TGG | - | chr4_1:41124889-41124908 | Msa0547760:five_prime_UTR | 45.0% | |
| ! | ACAAAGGTGGCTTGCAATTG+GGG | - | chr4_1:41125137-41125156 | Msa0547760:five_prime_UTR | 45.0% |
| CTTCAATGGGAAGTAGGTCA+AGG | - | chr4_1:41125256-41125275 | Msa0547760:five_prime_UTR | 45.0% | |
| !! | AAAATAAAAAAAATAAAAAC+TGG | + | chr4_1:41122085-41122104 | None:intergenic | 5.0% |
| ! | AGTAGTGGGGGCTAATGCAA+TGG | + | chr4_1:41121452-41121471 | None:intergenic | 50.0% |
| AACTGAAACTGTGCAGCCTC+AGG | - | chr4_1:41122378-41122397 | Msa0547760:intron | 50.0% | |
| GCTCTTGCTGCCGAATGTAA+AGG | + | chr4_1:41122469-41122488 | None:intergenic | 50.0% | |
| TTACATTCGGCAGCAAGAGC+AGG | - | chr4_1:41122469-41122488 | Msa0547760:intron | 50.0% | |
| TACATTCGGCAGCAAGAGCA+GGG | - | chr4_1:41122470-41122489 | Msa0547760:intron | 50.0% | |
| TGCAAGGCTGTTGTGTTGGA+CGG | + | chr4_1:41123334-41123353 | None:intergenic | 50.0% | |
| AGTGTGCAAGGCTGTTGTGT+TGG | + | chr4_1:41123338-41123357 | None:intergenic | 50.0% | |
| TTGTGTTGCAGCAGTGTGCA+AGG | + | chr4_1:41123350-41123369 | None:intergenic | 50.0% | |
| TTGCACACTGCTGCAACACA+AGG | - | chr4_1:41123349-41123368 | Msa0547760:CDS | 50.0% | |
| ! | GCAGAGTCTTGTGGTAGTAG+AGG | - | chr4_1:41123573-41123592 | Msa0547760:intron | 50.0% |
| CAGCGTTGCATATAGCAACC+AGG | - | chr4_1:41123650-41123669 | Msa0547760:intron | 50.0% | |
| AACCAGGAAGGGAAGAACTC+AGG | - | chr4_1:41123666-41123685 | Msa0547760:intron | 50.0% | |
| TACCTGAGTTCTTCCCTTCC+TGG | + | chr4_1:41123671-41123690 | None:intergenic | 50.0% | |
| GATGGCTTGATGAACAGGCT+TGG | - | chr4_1:41123969-41123988 | Msa0547760:intron | 50.0% | |
| TGTCGGAGTCAGTGCTTTGT+AGG | + | chr4_1:41124128-41124147 | None:intergenic | 50.0% | |
| AAACTCCACAACAGTCGTCG+CGG | - | chr4_1:41124795-41124814 | Msa0547760:intron | 50.0% | |
| CGAAAGCAACCGTTGCTATG+AGG | + | chr4_1:41124822-41124841 | None:intergenic | 50.0% | |
| CTGCACCAGTAAGGGCTCAA+AGG | - | chr4_1:41122401-41122420 | Msa0547760:intron | 55.0% | |
| GCGATTCTTGAGAAGGAGCC+AGG | - | chr4_1:41123493-41123512 | Msa0547760:CDS | 55.0% | |
| ! | AGGAGCCAGGTGTTGTAACG+CGG | - | chr4_1:41123506-41123525 | Msa0547760:CDS | 55.0% |
| TCAGTCCGCGTTACAACACC+TGG | + | chr4_1:41123514-41123533 | None:intergenic | 55.0% | |
| GCGCTTCACATGGCTGTGAA+GGG | - | chr4_1:41123550-41123569 | Msa0547760:intron | 55.0% | |
| CGCTTCACATGGCTGTGAAG+GGG | - | chr4_1:41123551-41123570 | Msa0547760:intron | 55.0% | |
| TGTGAAGGGGCAGAGTCTTG+TGG | - | chr4_1:41123564-41123583 | Msa0547760:intron | 55.0% | |
| CATAGGACACCGGCACCAAT+AGG | - | chr4_1:41124201-41124220 | Msa0547760:CDS | 55.0% | |
| ! | GATCGTCCACGAATTGGCCT+GGG | + | chr4_1:41124861-41124880 | None:intergenic | 55.0% |
| ! | TCGCCAAGGGATTTTCCTGG+AGG | + | chr4_1:41124895-41124914 | None:intergenic | 55.0% |
| ! | GCTTCGCCAAGGGATTTTCC+TGG | + | chr4_1:41124898-41124917 | None:intergenic | 55.0% |
| TTTCATCTCCCTCGCGGTTG+TGG | - | chr4_1:41124975-41124994 | Msa0547760:intron | 55.0% | |
| TTGAACCACCACAACCGCGA+GGG | + | chr4_1:41124986-41125005 | None:intergenic | 55.0% | |
| TTTGAACCACCACAACCGCG+AGG | + | chr4_1:41124987-41125006 | None:intergenic | 55.0% | |
| AGCCTCAGGCTGCACCAGTA+AGG | - | chr4_1:41122392-41122411 | Msa0547760:intron | 60.0% | |
| GCCTCAGGCTGCACCAGTAA+GGG | - | chr4_1:41122393-41122412 | Msa0547760:intron | 60.0% | |
| GGCAGCAAGAGCAGGGAACA+TGG | - | chr4_1:41122477-41122496 | Msa0547760:intron | 60.0% | |
| GGCGCTTCACATGGCTGTGA+AGG | - | chr4_1:41123549-41123568 | Msa0547760:intron | 60.0% | |
| CGTCGCGGTCCTCATAGCAA+CGG | - | chr4_1:41124810-41124829 | Msa0547760:intron | 60.0% | |
| TTGGCCTGGGACGGTGAAGA+TGG | + | chr4_1:41124848-41124867 | None:intergenic | 60.0% | |
| ! | GTCCACGAATTGGCCTGGGA+CGG | + | chr4_1:41124857-41124876 | None:intergenic | 60.0% |
| GGATCGTCCACGAATTGGCC+TGG | + | chr4_1:41124862-41124881 | None:intergenic | 60.0% | |
| ! | CGCGCTTTTCATCTCCCTCG+CGG | - | chr4_1:41124969-41124988 | Msa0547760:intron | 60.0% |
| GCCCTTACTGGTGCAGCCTG+AGG | + | chr4_1:41122397-41122416 | None:intergenic | 65.0% | |
| GGGACAGACGGCGCTTCACA+TGG | - | chr4_1:41123540-41123559 | Msa0547760:intron | 65.0% | |
| GAGGACCGCGACGACTGTTG+TGG | + | chr4_1:41124803-41124822 | None:intergenic | 65.0% | |
| GCAGCCATCTTCACCGTCCC+AGG | - | chr4_1:41124841-41124860 | Msa0547760:intron | 65.0% | |
| CACCGTCCCAGGCCAATTCG+TGG | - | chr4_1:41124852-41124871 | Msa0547760:intron | 65.0% | |
| CATCTCCCTCGCGGTTGTGG+TGG | - | chr4_1:41124978-41124997 | Msa0547760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 41121410 | 41125406 | 41121410 | ID=Msa0547760;Name=Msa0547760 |
| chr4_1 | mRNA | 41121410 | 41125406 | 41121410 | ID=Msa0547760-mRNA-1;Parent=Msa0547760;Name=Msa0547760-mRNA-1;_AED=0.12;_eAED=0.12;_QI=492|1|1|1|0.4|0.33|6|53|546 |
| chr4_1 | exon | 41121410 | 41122338 | 41121410 | ID=Msa0547760-mRNA-1:exon:10566;Parent=Msa0547760-mRNA-1 |
| chr4_1 | exon | 41123129 | 41123538 | 41123129 | ID=Msa0547760-mRNA-1:exon:10565;Parent=Msa0547760-mRNA-1 |
| chr4_1 | exon | 41124095 | 41124529 | 41124095 | ID=Msa0547760-mRNA-1:exon:10564;Parent=Msa0547760-mRNA-1 |
| chr4_1 | exon | 41124657 | 41124704 | 41124657 | ID=Msa0547760-mRNA-1:exon:10563;Parent=Msa0547760-mRNA-1 |
| chr4_1 | exon | 41124864 | 41124947 | 41124864 | ID=Msa0547760-mRNA-1:exon:10562;Parent=Msa0547760-mRNA-1 |
| chr4_1 | exon | 41125127 | 41125406 | 41125127 | ID=Msa0547760-mRNA-1:exon:10561;Parent=Msa0547760-mRNA-1 |
| chr4_1 | five_prime_UTR | 41125127 | 41125406 | 41125127 | ID=Msa0547760-mRNA-1:five_prime_utr;Parent=Msa0547760-mRNA-1 |
| chr4_1 | five_prime_UTR | 41124864 | 41124947 | 41124864 | ID=Msa0547760-mRNA-1:five_prime_utr;Parent=Msa0547760-mRNA-1 |
| chr4_1 | five_prime_UTR | 41124657 | 41124704 | 41124657 | ID=Msa0547760-mRNA-1:five_prime_utr;Parent=Msa0547760-mRNA-1 |
| chr4_1 | five_prime_UTR | 41124450 | 41124529 | 41124450 | ID=Msa0547760-mRNA-1:five_prime_utr;Parent=Msa0547760-mRNA-1 |
| chr4_1 | CDS | 41124095 | 41124449 | 41124095 | ID=Msa0547760-mRNA-1:cds;Parent=Msa0547760-mRNA-1 |
| chr4_1 | CDS | 41123129 | 41123538 | 41123129 | ID=Msa0547760-mRNA-1:cds;Parent=Msa0547760-mRNA-1 |
| chr4_1 | CDS | 41121463 | 41122338 | 41121463 | ID=Msa0547760-mRNA-1:cds;Parent=Msa0547760-mRNA-1 |
| chr4_1 | three_prime_UTR | 41121410 | 41121462 | 41121410 | ID=Msa0547760-mRNA-1:three_prime_utr;Parent=Msa0547760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
