Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041900 | XP_039684219.1 | 95.417 | 480 | 14 | 3 | 23 | 499 | 1 | 475 | 0.0 | 954 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041900 | sp|Q9LZS0|PTL_ARATH | 45.972 | 422 | 165 | 12 | 23 | 409 | 1 | 394 | 3.90e-93 | 298 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041900 | A0A396H5V1 | 95.417 | 480 | 14 | 3 | 23 | 499 | 1 | 475 | 0.0 | 954 |
Gene ID | Type | Classification |
---|---|---|
Msa1041900 | TF | Trihelix |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017510 | Msa1041900 | 0.817640 | 2.969713e-52 | -8.615850e-47 |
Msa0072370 | Msa1041900 | 0.814504 | 1.489404e-51 | -8.615850e-47 |
Msa0110970 | Msa1041900 | 0.832948 | 7.062753e-56 | -8.615850e-47 |
Msa0118570 | Msa1041900 | 0.804671 | 1.931276e-49 | -8.615850e-47 |
Msa0828560 | Msa1041900 | 0.801745 | 7.789928e-49 | -8.615850e-47 |
Msa0157290 | Msa1041900 | 0.818224 | 2.191336e-52 | -8.615850e-47 |
Msa0410650 | Msa1041900 | 0.807891 | 4.051005e-50 | -8.615850e-47 |
Msa1041900 | Msa1080100 | 0.912759 | 1.347799e-83 | -8.615850e-47 |
Msa1041900 | Msa1080240 | 0.925003 | 3.300583e-90 | -8.615850e-47 |
Msa1041900 | Msa1085200 | 0.805314 | 1.416914e-49 | -8.615850e-47 |
Msa1041900 | Msa1125000 | 0.905992 | 2.386031e-80 | -8.615850e-47 |
Msa1041900 | Msa1127950 | 0.802295 | 6.002726e-49 | -8.615850e-47 |
Msa1041900 | Msa1167280 | 0.893035 | 9.141402e-75 | -8.615850e-47 |
Msa1041900 | Msa1351760 | 0.818100 | 2.338177e-52 | -8.615850e-47 |
Msa1041900 | Msa1374550 | 0.828214 | 1.018001e-54 | -8.615850e-47 |
Msa1041900 | Msa1430240 | 0.815271 | 1.006906e-51 | -8.615850e-47 |
Msa0239570 | Msa1041900 | 0.806111 | 9.638504e-50 | -8.615850e-47 |
Msa0300690 | Msa1041900 | 0.803151 | 3.997447e-49 | -8.615850e-47 |
Msa0317280 | Msa1041900 | 0.832447 | 9.404110e-56 | -8.615850e-47 |
Msa0317340 | Msa1041900 | 0.800618 | 1.324265e-48 | -8.615850e-47 |
Msa0363070 | Msa1041900 | 0.808777 | 2.621238e-50 | -8.615850e-47 |
Msa0487630 | Msa1041900 | 0.806515 | 7.922888e-50 | -8.615850e-47 |
Msa0507680 | Msa1041900 | 0.803005 | 4.284732e-49 | -8.615850e-47 |
Msa0527550 | Msa1041900 | 0.841952 | 3.477971e-58 | -8.615850e-47 |
Msa0574890 | Msa1041900 | 0.803777 | 2.964194e-49 | -8.615850e-47 |
Msa0880140 | Msa1041900 | 0.815864 | 7.429824e-52 | -8.615850e-47 |
Msa0925180 | Msa1041900 | 0.814966 | 1.177080e-51 | -8.615850e-47 |
Msa0930780 | Msa1041900 | 0.809214 | 2.114004e-50 | -8.615850e-47 |
Msa0936410 | Msa1041900 | 0.803128 | 4.041914e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041900 | MtrunA17_Chr7g0265831 | 95.417 | 480 | 14 | 3 | 23 | 499 | 1 | 475 | 0.0 | 954 |
Msa1041900 | MtrunA17_Chr1g0179191 | 52.290 | 524 | 146 | 17 | 39 | 498 | 27 | 510 | 1.29e-152 | 445 |
Msa1041900 | MtrunA17_Chr1g0198171 | 38.161 | 435 | 209 | 16 | 39 | 435 | 10 | 422 | 1.95e-79 | 256 |
Msa1041900 | MtrunA17_Chr1g0201941 | 37.209 | 301 | 134 | 4 | 141 | 387 | 57 | 356 | 8.30e-49 | 177 |
Msa1041900 | MtrunA17_Chr1g0201941 | 43.000 | 100 | 54 | 3 | 132 | 230 | 446 | 543 | 5.52e-18 | 87.0 |
Msa1041900 | MtrunA17_Chr1g0201911 | 35.556 | 270 | 143 | 4 | 141 | 389 | 55 | 314 | 4.40e-39 | 149 |
Msa1041900 | MtrunA17_Chr1g0201911 | 41.732 | 127 | 62 | 4 | 130 | 255 | 361 | 476 | 3.43e-20 | 94.0 |
Msa1041900 | MtrunA17_Chr6g0463941 | 64.423 | 104 | 31 | 3 | 134 | 235 | 46 | 145 | 2.57e-34 | 136 |
Msa1041900 | MtrunA17_Chr6g0463941 | 44.330 | 97 | 52 | 2 | 137 | 232 | 460 | 555 | 4.11e-19 | 90.5 |
Msa1041900 | MtrunA17_Chr1g0190851 | 26.648 | 349 | 199 | 12 | 48 | 388 | 29 | 328 | 5.71e-16 | 80.5 |
Msa1041900 | MtrunA17_Chr1g0190851 | 37.634 | 93 | 54 | 3 | 141 | 230 | 418 | 509 | 1.85e-11 | 66.6 |
Msa1041900 | MtrunA17_Chr7g0273941 | 33.588 | 131 | 65 | 4 | 110 | 230 | 361 | 479 | 2.90e-14 | 75.1 |
Msa1041900 | MtrunA17_Chr2g0290511 | 32.812 | 128 | 82 | 3 | 104 | 228 | 223 | 349 | 2.10e-13 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1041900 | AT5G03680.1 | 45.972 | 422 | 165 | 12 | 23 | 409 | 1 | 394 | 3.97e-94 | 298 |
Msa1041900 | AT3G10000.1 | 39.872 | 469 | 223 | 11 | 69 | 499 | 34 | 481 | 1.61e-91 | 287 |
Msa1041900 | AT3G10000.2 | 38.166 | 469 | 221 | 12 | 69 | 499 | 34 | 471 | 1.08e-81 | 261 |
Msa1041900 | AT1G76890.2 | 34.727 | 311 | 141 | 7 | 134 | 388 | 34 | 338 | 3.65e-41 | 155 |
Msa1041900 | AT1G76890.2 | 39.437 | 142 | 73 | 3 | 134 | 274 | 390 | 519 | 2.95e-20 | 94.4 |
Msa1041900 | AT1G76880.1 | 55.856 | 111 | 43 | 2 | 121 | 231 | 46 | 150 | 1.41e-30 | 125 |
Msa1041900 | AT1G76880.1 | 43.000 | 100 | 55 | 2 | 134 | 232 | 401 | 499 | 1.81e-17 | 85.9 |
Msa1041900 | AT1G33240.3 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 4.69e-30 | 124 |
Msa1041900 | AT1G33240.3 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.54e-16 | 82.4 |
Msa1041900 | AT1G33240.1 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 6.39e-30 | 124 |
Msa1041900 | AT1G33240.1 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.47e-16 | 82.4 |
Msa1041900 | AT1G33240.2 | 43.820 | 89 | 48 | 2 | 141 | 228 | 396 | 483 | 2.45e-16 | 82.4 |
Msa1041900 | AT1G33240.2 | 64.407 | 59 | 18 | 1 | 181 | 239 | 62 | 117 | 2.84e-15 | 79.0 |
Msa1041900 | AT5G28300.1 | 38.614 | 101 | 50 | 4 | 141 | 230 | 459 | 558 | 1.59e-12 | 70.5 |
Msa1041900 | AT5G47660.1 | 41.758 | 91 | 45 | 4 | 141 | 228 | 303 | 388 | 1.44e-11 | 66.6 |
Find 114 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGATGATATTATTACTTATT+AGG | 0.192936 | 7_1:-79582533 | Msa1041900:three_prime_UTR |
GCAAAGCATAAATGATAATT+AGG | 0.220249 | 7_1:+79582311 | None:intergenic |
AGCTAGGGATGCTGCTTTAA+TGG | 0.226192 | 7_1:-79583011 | Msa1041900:CDS |
ATTATTGCTTTCTCCATATA+AGG | 0.243458 | 7_1:+79583456 | None:intergenic |
CGTCAACTTGAAGCCTTATA+TGG | 0.244935 | 7_1:-79583469 | Msa1041900:CDS |
TATTACTTATTAGGTAATTA+AGG | 0.265081 | 7_1:-79582524 | Msa1041900:three_prime_UTR |
AAACTTCAACTCACTGGTTT+TGG | 0.276459 | 7_1:+79582645 | None:intergenic |
TACTATCATAGTGTTGATTA+TGG | 0.322614 | 7_1:+79584735 | None:intergenic |
TGATTCACAGCTGAAGAAAT+TGG | 0.325251 | 7_1:-79583188 | Msa1041900:CDS |
TTGGGGTATGACACTAATTC+AGG | 0.332866 | 7_1:-79582349 | Msa1041900:three_prime_UTR |
CTCTTTGGGATCAACTTTCT+AGG | 0.339621 | 7_1:-79584310 | Msa1041900:intron |
GCTTCAACTCCTTCATTTAG+TGG | 0.343719 | 7_1:-79584470 | Msa1041900:CDS |
TATATTATAAGATAAGAAAA+AGG | 0.352475 | 7_1:+79584837 | None:intergenic |
TTCAAAGAAGCTACTCAAAA+AGG | 0.354316 | 7_1:-79584335 | Msa1041900:CDS |
GGAGTAGTGGAAGAAGCTTC+TGG | 0.362256 | 7_1:-79583234 | Msa1041900:CDS |
TTGATCATTAACATCACAAT+AGG | 0.364480 | 7_1:+79582811 | None:intergenic |
TTATGCTTTGCAAATGGATC+TGG | 0.367317 | 7_1:-79582299 | Msa1041900:three_prime_UTR |
CATACCCCAACAACACTTGA+TGG | 0.388209 | 7_1:+79582362 | None:intergenic |
AAATTGTTGGTAGTTGATCT+TGG | 0.391857 | 7_1:+79584674 | None:intergenic |
ATTCAATTATCTCATGGAAA+TGG | 0.397721 | 7_1:-79584762 | Msa1041900:CDS |
CACAAAGACATTGGAACAAA+AGG | 0.401812 | 7_1:-79583134 | Msa1041900:CDS |
GTGTTGTTGATGTGGGTTGC+CGG | 0.402706 | 7_1:+79584628 | None:intergenic |
ATATTCCATCAAGTGTTGTT+GGG | 0.413234 | 7_1:-79582367 | Msa1041900:three_prime_UTR |
TGTTGATGTGGGTTGCCGGC+GGG | 0.415527 | 7_1:+79584632 | None:intergenic |
AATGATATGTAATTCATGTA+TGG | 0.419239 | 7_1:-79582241 | Msa1041900:three_prime_UTR |
TATCATTTATGCTTTGCAAA+TGG | 0.427237 | 7_1:-79582305 | Msa1041900:three_prime_UTR |
GAAACAAGAGAAAGAAAGGT+TGG | 0.430312 | 7_1:-79583077 | Msa1041900:CDS |
CCCTCAGTACTCATCAAGAA+TGG | 0.434497 | 7_1:+79582713 | None:intergenic |
TGTGGGAGTGAAGATGAAGA+AGG | 0.446001 | 7_1:+79583433 | None:intergenic |
GGAGGAAACAAGAGAAAGAA+AGG | 0.446373 | 7_1:-79583081 | Msa1041900:CDS |
GCTGAAACTACTGGTTTCAT+TGG | 0.454310 | 7_1:-79584437 | Msa1041900:CDS |
TTTGGGCTAAAGAAAGAGCT+TGG | 0.456386 | 7_1:-79583039 | Msa1041900:CDS |
ATACTATTGAAAGTTGAGAT+AGG | 0.456436 | 7_1:+79584788 | None:intergenic |
ATGGGGACCATTACCCTTGT+TGG | 0.461250 | 7_1:-79584989 | Msa1041900:five_prime_UTR |
ATTGGTGTTGATGCTTCAAC+TGG | 0.466336 | 7_1:-79584419 | Msa1041900:CDS |
AAACATTTCCTGATTGTTGT+TGG | 0.473343 | 7_1:+79583396 | None:intergenic |
GGAGAAGCAAGAAGAATGGT+TGG | 0.477059 | 7_1:-79583164 | Msa1041900:CDS |
AAAGAGCTTGGATTGAAGCT+AGG | 0.477669 | 7_1:-79583027 | Msa1041900:CDS |
TATATTCCATCAAGTGTTGT+TGG | 0.481226 | 7_1:-79582368 | Msa1041900:three_prime_UTR |
TATCACAGTGTTTGTTAATG+TGG | 0.481655 | 7_1:+79583368 | None:intergenic |
GGAAAAGCAGGAAGACAAGA+TGG | 0.483853 | 7_1:-79583511 | Msa1041900:CDS |
GTGGGAGAATTACAACTTGA+AGG | 0.483975 | 7_1:-79582681 | Msa1041900:CDS |
GTTGTGAAACTTCAACTCAC+TGG | 0.485337 | 7_1:+79582639 | None:intergenic |
ATTAAGACCAACAAGGGTAA+TGG | 0.488890 | 7_1:+79584982 | None:intergenic |
AAGACCAAGGAAGGAAAAGC+AGG | 0.489921 | 7_1:-79583523 | Msa1041900:CDS |
TGAGTAGCTTCTTTGAATTG+AGG | 0.494836 | 7_1:+79584341 | None:intergenic |
ATCTCATAGTGTTGTTGATG+TGG | 0.498646 | 7_1:+79584620 | None:intergenic |
TATAATGTTAACAATGGAGA+TGG | 0.503073 | 7_1:-79582842 | Msa1041900:CDS |
AATGATCAAAGGGAAGAACT+TGG | 0.504968 | 7_1:-79582797 | Msa1041900:CDS |
ACTCAATCTTCTTCTCATGA+TGG | 0.508615 | 7_1:-79582944 | Msa1041900:CDS |
AATTTAGAAGCTGAAACTAC+TGG | 0.509455 | 7_1:-79584446 | Msa1041900:CDS |
CACTATGAGATGATGATGTT+TGG | 0.510125 | 7_1:-79584608 | Msa1041900:CDS |
TATCATATTCAATTATCTCA+TGG | 0.512431 | 7_1:-79584768 | Msa1041900:CDS |
CCTCAGTACTCATCAAGAAT+GGG | 0.515932 | 7_1:+79582714 | None:intergenic |
TTGTGATGTTAATGATCAAA+GGG | 0.516121 | 7_1:-79582807 | Msa1041900:CDS |
TGGAAATAATAAGAAGAGAA+AGG | 0.518093 | 7_1:-79582924 | Msa1041900:CDS |
ATCACAGTGTTTGTTAATGT+GGG | 0.521709 | 7_1:+79583369 | None:intergenic |
TGTTTATATAATGTTAACAA+TGG | 0.527902 | 7_1:-79582848 | Msa1041900:CDS |
TTGATGCTTCAACTGGAAGA+TGG | 0.530593 | 7_1:-79584412 | Msa1041900:CDS |
CCATTCTTGATGAGTACTGA+GGG | 0.532198 | 7_1:-79582713 | Msa1041900:CDS |
GGGTGTTAAGAGAAGAAGAG+TGG | 0.532295 | 7_1:-79583102 | Msa1041900:CDS |
AAGAGCTTGGATTGAAGCTA+GGG | 0.532871 | 7_1:-79583026 | Msa1041900:CDS |
TACTGAGGGAGGAAATATGT+GGG | 0.537099 | 7_1:-79582699 | Msa1041900:CDS |
TCTAAATTACCACTAAATGA+AGG | 0.538013 | 7_1:+79584461 | None:intergenic |
GTTGATGTGGGTTGCCGGCG+GGG | 0.539548 | 7_1:+79584633 | None:intergenic |
ATTGTGATGTTAATGATCAA+AGG | 0.541913 | 7_1:-79582808 | Msa1041900:CDS |
AAGAGCTAACTGAAGAAATG+AGG | 0.545636 | 7_1:-79582575 | Msa1041900:three_prime_UTR |
TGGTGGAGAAGCAAGAAGAA+TGG | 0.548730 | 7_1:-79583168 | Msa1041900:CDS |
TCTCATAGTGTTGTTGATGT+GGG | 0.555577 | 7_1:+79584621 | None:intergenic |
CTCCGCCGTAGGGAAATTGT+TGG | 0.561007 | 7_1:+79584661 | None:intergenic |
GTTAACAATGGAGATGGAGC+TGG | 0.562473 | 7_1:-79582836 | Msa1041900:CDS |
TTGTTGATGTGGGTTGCCGG+CGG | 0.563154 | 7_1:+79584631 | None:intergenic |
AGTGTAAGAGTCTCTTGTCT+AGG | 0.565795 | 7_1:+79584389 | None:intergenic |
ATGATAACAACAATGTTGAT+CGG | 0.565825 | 7_1:-79582874 | Msa1041900:CDS |
TTCACAGCTGAAGAAATTGG+TGG | 0.567445 | 7_1:-79583185 | Msa1041900:CDS |
GGGAGAGTACAAACAAATGA+TGG | 0.567681 | 7_1:-79582776 | Msa1041900:CDS |
ACAGTAACAGCAGCAACAGC+AGG | 0.567957 | 7_1:+79584527 | None:intergenic |
GCACTAGTGGTGGTGTTGGT+AGG | 0.568004 | 7_1:+79584491 | None:intergenic |
GAAAAGCAGGAAGACAAGAT+GGG | 0.570202 | 7_1:-79583510 | Msa1041900:CDS |
GCGGGGAATAGCTCCGCCGT+AGG | 0.579850 | 7_1:+79584650 | None:intergenic |
TATTCCATCAAGTGTTGTTG+GGG | 0.581444 | 7_1:-79582366 | Msa1041900:three_prime_UTR |
AGTGGTGGTGTTGGTAGGAG+TGG | 0.582934 | 7_1:+79584496 | None:intergenic |
CAAAGAGAATGAGTTCTCCA+TGG | 0.584262 | 7_1:-79583272 | Msa1041900:CDS |
ATGATCAAAGGGAAGAACTT+GGG | 0.587215 | 7_1:-79582796 | Msa1041900:CDS |
GGAGAAACTCACAAAGACAT+TGG | 0.587360 | 7_1:-79583143 | Msa1041900:CDS |
CGGGGAATAGCTCCGCCGTA+GGG | 0.588808 | 7_1:+79584651 | None:intergenic |
AACATGGCTATCAAAGGAGT+GGG | 0.590438 | 7_1:-79583591 | Msa1041900:CDS |
TGAAGCACTAGTGGTGGTGT+TGG | 0.592317 | 7_1:+79584487 | None:intergenic |
CCCATTCTTGATGAGTACTG+AGG | 0.594659 | 7_1:-79582714 | Msa1041900:CDS |
CTCAAATATTAAGACCAACA+AGG | 0.598102 | 7_1:+79584975 | None:intergenic |
GTGAAGAACATGGCTATCAA+AGG | 0.598664 | 7_1:-79583597 | Msa1041900:CDS |
AGGATAATGTGTGAAGAACA+TGG | 0.603245 | 7_1:-79583607 | Msa1041900:CDS |
CGAATTCAGTGGAGTTTGTG+AGG | 0.604333 | 7_1:+79583338 | None:intergenic |
GAACATGGCTATCAAAGGAG+TGG | 0.606340 | 7_1:-79583592 | Msa1041900:CDS |
AGAGCTAACTGAAGAAATGA+GGG | 0.609109 | 7_1:-79582574 | Msa1041900:three_prime_UTR |
AAGATGTTAAGCGGCAGAGT+CGG | 0.611463 | 7_1:+79584931 | None:intergenic |
TGATGATCATAGTACTCATG+AGG | 0.611714 | 7_1:-79583299 | Msa1041900:CDS |
TCAAATATTAAGACCAACAA+GGG | 0.614018 | 7_1:+79584976 | None:intergenic |
GATGATCATAGTACTCATGA+GGG | 0.620992 | 7_1:-79583298 | Msa1041900:CDS |
TGAAGATTGAAGATGTTAAG+CGG | 0.622485 | 7_1:+79584922 | None:intergenic |
TGAAGGAGTTGAAGCACTAG+TGG | 0.623923 | 7_1:+79584478 | None:intergenic |
CGATGATGTGTCGAATTCAG+TGG | 0.625749 | 7_1:+79583327 | None:intergenic |
AACTACCAACAATTTCCCTA+CGG | 0.632466 | 7_1:-79584666 | Msa1041900:CDS |
TACAACTTGAAGGTTAACAA+AGG | 0.634719 | 7_1:-79582671 | Msa1041900:CDS |
TGTTAAGAGAAGAAGAGTGG+AGG | 0.635425 | 7_1:-79583099 | Msa1041900:CDS |
TAGTGGAAGAAGCTTCTGGA+AGG | 0.636390 | 7_1:-79583230 | Msa1041900:CDS |
CTAGAAAGTTGATCCCAAAG+AGG | 0.637397 | 7_1:+79584311 | None:intergenic |
ACGGCGGAGCTATTCCCCGC+CGG | 0.640713 | 7_1:-79584647 | Msa1041900:CDS |
GTACTGAGGGAGGAAATATG+TGG | 0.650852 | 7_1:-79582700 | Msa1041900:CDS |
TACCAACAATTTCCCTACGG+CGG | 0.660564 | 7_1:-79584663 | Msa1041900:CDS |
TTCTTGATGAGTACTGAGGG+AGG | 0.678329 | 7_1:-79582710 | Msa1041900:CDS |
ATGATCATAGTACTCATGAG+GGG | 0.712141 | 7_1:-79583297 | Msa1041900:CDS |
AGGAGTTGAAGCACTAGTGG+TGG | 0.716487 | 7_1:+79584481 | None:intergenic |
ACAAAATCATGAAGACAACG+AGG | 0.773702 | 7_1:+79584563 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTATAAGATAAGAAAA+AGG | + | chr7_1:79582376-79582395 | None:intergenic | 10.0% |
!!! | TTTATATTTTTTTGACAAAA+TGG | + | chr7_1:79584762-79584781 | None:intergenic | 10.0% |
!! | TTGTCAAAAAAATATAAATA+TGG | - | chr7_1:79584764-79584783 | Msa1041900:CDS | 10.0% |
!! | TAAATAAGGAGATAATAAAA+GGG | + | chr7_1:79583215-79583234 | None:intergenic | 15.0% |
!! | TTAAATAAGGAGATAATAAA+AGG | + | chr7_1:79583216-79583235 | None:intergenic | 15.0% |
!!! | TTTTCATCTTTTTTTTTGTA+AGG | - | chr7_1:79583259-79583278 | Msa1041900:CDS | 15.0% |
!! | TGTTTATATAATGTTAACAA+TGG | - | chr7_1:79584362-79584381 | Msa1041900:CDS | 15.0% |
!! | TGATGATATTATTACTTATT+AGG | - | chr7_1:79584677-79584696 | Msa1041900:CDS | 15.0% |
!! | TATTACTTATTAGGTAATTA+AGG | - | chr7_1:79584686-79584705 | Msa1041900:CDS | 15.0% |
!!! | ATCAATATTTTTATCAATCT+CGG | - | chr7_1:79584715-79584734 | Msa1041900:CDS | 15.0% |
!! | TATCATATTCAATTATCTCA+TGG | - | chr7_1:79582442-79582461 | Msa1041900:three_prime_UTR | 20.0% |
!! | AAACATACCAAATAATTTGA+AGG | + | chr7_1:79582960-79582979 | None:intergenic | 20.0% |
!!! | AGTTGAGTGTATTTTAAATA+AGG | + | chr7_1:79583229-79583248 | None:intergenic | 20.0% |
!!! | TTTAAAATACACTCAACTTT+CGG | - | chr7_1:79583231-79583250 | Msa1041900:CDS | 20.0% |
!!! | TTTTGTAAGGAAATTTATTG+AGG | - | chr7_1:79583272-79583291 | Msa1041900:CDS | 20.0% |
!! | TTTGTAAGGAAATTTATTGA+GGG | - | chr7_1:79583273-79583292 | Msa1041900:CDS | 20.0% |
!! | TTTAAATTGTCAATAGGAAT+GGG | + | chr7_1:79583382-79583401 | None:intergenic | 20.0% |
!! | ATTTAAATTGTCAATAGGAA+TGG | + | chr7_1:79583383-79583402 | None:intergenic | 20.0% |
!!! | ATGTCATTTAAATTGTCAAT+AGG | + | chr7_1:79583388-79583407 | None:intergenic | 20.0% |
!! | AAAACAACAAAAGCTTAATT+GGG | + | chr7_1:79583545-79583564 | None:intergenic | 20.0% |
!! | AAAAACAACAAAAGCTTAAT+TGG | + | chr7_1:79583546-79583565 | None:intergenic | 20.0% |
!!! | ACAACTTTTTTTTTCTTCTA+AGG | - | chr7_1:79584589-79584608 | Msa1041900:CDS | 20.0% |
!!! | ACAAAAAGTTAGTTTAATGA+TGG | - | chr7_1:79584814-79584833 | Msa1041900:CDS | 20.0% |
!!! | CAAAAAGTTAGTTTAATGAT+GGG | - | chr7_1:79584815-79584834 | Msa1041900:CDS | 20.0% |
!! | AATGATATGTAATTCATGTA+TGG | - | chr7_1:79584969-79584988 | Msa1041900:five_prime_UTR | 20.0% |
! | TCAAATATTAAGACCAACAA+GGG | + | chr7_1:79582237-79582256 | None:intergenic | 25.0% |
! | ATACTATTGAAAGTTGAGAT+AGG | + | chr7_1:79582425-79582444 | None:intergenic | 25.0% |
! | ATTCAATTATCTCATGGAAA+TGG | - | chr7_1:79582448-79582467 | Msa1041900:three_prime_UTR | 25.0% |
!!! | TACTATCATAGTGTTGATTA+TGG | + | chr7_1:79582478-79582497 | None:intergenic | 25.0% |
! | TCTAAATTACCACTAAATGA+AGG | + | chr7_1:79582752-79582771 | None:intergenic | 25.0% |
!! | TCCTTTTCCTTCAAATTATT+TGG | - | chr7_1:79582950-79582969 | Msa1041900:CDS | 25.0% |
! | ACCAAATAATTTGAAGGAAA+AGG | + | chr7_1:79582954-79582973 | None:intergenic | 25.0% |
! | TTTGTGTTAACAAAAATGAG+TGG | - | chr7_1:79582977-79582996 | Msa1041900:CDS | 25.0% |
! | AAGAACCTTAACAAAAAGTA+GGG | + | chr7_1:79583069-79583088 | None:intergenic | 25.0% |
! | AAAGAACCTTAACAAAAAGT+AGG | + | chr7_1:79583070-79583089 | None:intergenic | 25.0% |
!! | TTTTGTTAAGGTTCTTTTAC+TGG | - | chr7_1:79583073-79583092 | Msa1041900:CDS | 25.0% |
! | AAAAAAGGTAGTACTAATCT+TGG | + | chr7_1:79583150-79583169 | None:intergenic | 25.0% |
! | ACAATTTCAAAAGGGAAAAA+AGG | + | chr7_1:79583165-79583184 | None:intergenic | 25.0% |
! | AAAACTTTGCACTTAAAAGA+GGG | + | chr7_1:79583191-79583210 | None:intergenic | 25.0% |
! | AAAAACTTTGCACTTAAAAG+AGG | + | chr7_1:79583192-79583211 | None:intergenic | 25.0% |
! | TTGTAAGGAAATTTATTGAG+GGG | - | chr7_1:79583274-79583293 | Msa1041900:CDS | 25.0% |
! | CTAATTCTATCTATCTTACA+TGG | - | chr7_1:79583319-79583338 | Msa1041900:CDS | 25.0% |
! | AATTAATATTGAACCCTAGT+TGG | + | chr7_1:79583519-79583538 | None:intergenic | 25.0% |
! | AAACAACAAAAGCTTAATTG+GGG | + | chr7_1:79583544-79583563 | None:intergenic | 25.0% |
! | ATTATTGCTTTCTCCATATA+AGG | + | chr7_1:79583757-79583776 | None:intergenic | 25.0% |
!!! | TGGTACAAAAATTGTTTTGT+GGG | + | chr7_1:79583797-79583816 | None:intergenic | 25.0% |
!!! | TTGGTACAAAAATTGTTTTG+TGG | + | chr7_1:79583798-79583817 | None:intergenic | 25.0% |
!!! | TGGAAAAAGAGCATAAATTT+TGG | - | chr7_1:79584153-79584172 | Msa1041900:intron | 25.0% |
!!! | GGAAAAAGAGCATAAATTTT+GGG | - | chr7_1:79584154-79584173 | Msa1041900:intron | 25.0% |
! | TGGAAATAATAAGAAGAGAA+AGG | - | chr7_1:79584286-79584305 | Msa1041900:intron | 25.0% |
! | ATGATAACAACAATGTTGAT+CGG | - | chr7_1:79584336-79584355 | Msa1041900:CDS | 25.0% |
! | TATAATGTTAACAATGGAGA+TGG | - | chr7_1:79584368-79584387 | Msa1041900:CDS | 25.0% |
! | TTGATCATTAACATCACAAT+AGG | + | chr7_1:79584402-79584421 | None:intergenic | 25.0% |
! | ATTGTGATGTTAATGATCAA+AGG | - | chr7_1:79584402-79584421 | Msa1041900:CDS | 25.0% |
! | TTGTGATGTTAATGATCAAA+GGG | - | chr7_1:79584403-79584422 | Msa1041900:CDS | 25.0% |
! | GCAAAGCATAAATGATAATT+AGG | + | chr7_1:79584902-79584921 | None:intergenic | 25.0% |
! | TATCATTTATGCTTTGCAAA+TGG | - | chr7_1:79584905-79584924 | Msa1041900:five_prime_UTR | 25.0% |
CTCAAATATTAAGACCAACA+AGG | + | chr7_1:79582238-79582257 | None:intergenic | 30.0% | |
TGAAGATTGAAGATGTTAAG+CGG | + | chr7_1:79582291-79582310 | None:intergenic | 30.0% | |
!! | AAATTGTTGGTAGTTGATCT+TGG | + | chr7_1:79582539-79582558 | None:intergenic | 30.0% |
AATTTAGAAGCTGAAACTAC+TGG | - | chr7_1:79582764-79582783 | Msa1041900:CDS | 30.0% | |
TTCAAAGAAGCTACTCAAAA+AGG | - | chr7_1:79582875-79582894 | Msa1041900:CDS | 30.0% | |
!!! | TTTGTCCCTACTTTTTGTTA+AGG | - | chr7_1:79583061-79583080 | Msa1041900:CDS | 30.0% |
! | AAATTTATTGAGGGGTACAA+GGG | - | chr7_1:79583282-79583301 | Msa1041900:CDS | 30.0% |
AATATTCATAGCTCCAACTA+GGG | - | chr7_1:79583503-79583522 | Msa1041900:CDS | 30.0% | |
! | CATTGCTTGTATTGATGTTA+AGG | - | chr7_1:79583583-79583602 | Msa1041900:CDS | 30.0% |
CAAATACTACAAAAAGACCA+AGG | - | chr7_1:79583674-79583693 | Msa1041900:intron | 30.0% | |
! | TTTTTGTACCAACAACAATC+AGG | - | chr7_1:79583806-79583825 | Msa1041900:intron | 30.0% |
AAACATTTCCTGATTGTTGT+TGG | + | chr7_1:79583817-79583836 | None:intergenic | 30.0% | |
! | ATCACAGTGTTTGTTAATGT+GGG | + | chr7_1:79583844-79583863 | None:intergenic | 30.0% |
! | TATCACAGTGTTTGTTAATG+TGG | + | chr7_1:79583845-79583864 | None:intergenic | 30.0% |
GAAGCTTTGCAAAAATTAAC+AGG | - | chr7_1:79584221-79584240 | Msa1041900:intron | 30.0% | |
TACAACTTGAAGGTTAACAA+AGG | - | chr7_1:79584539-79584558 | Msa1041900:CDS | 30.0% | |
ATCTCGGAGAGAAAAAAATA+TGG | - | chr7_1:79584731-79584750 | Msa1041900:CDS | 30.0% | |
! | TGTCTTCAATTTTTCTGTTG+AGG | + | chr7_1:79584795-79584814 | None:intergenic | 30.0% |
! | TATATTCCATCAAGTGTTGT+TGG | - | chr7_1:79584842-79584861 | Msa1041900:five_prime_UTR | 30.0% |
! | ATATTCCATCAAGTGTTGTT+GGG | - | chr7_1:79584843-79584862 | Msa1041900:five_prime_UTR | 30.0% |
ATTAAGACCAACAAGGGTAA+TGG | + | chr7_1:79582231-79582250 | None:intergenic | 35.0% | |
AACTACCAACAATTTCCCTA+CGG | - | chr7_1:79582544-79582563 | Msa1041900:three_prime_UTR | 35.0% | |
! | TCTCATAGTGTTGTTGATGT+GGG | + | chr7_1:79582592-79582611 | None:intergenic | 35.0% |
! | ATCTCATAGTGTTGTTGATG+TGG | + | chr7_1:79582593-79582612 | None:intergenic | 35.0% |
! | CACTATGAGATGATGATGTT+TGG | - | chr7_1:79582602-79582621 | Msa1041900:three_prime_UTR | 35.0% |
ACAAAATCATGAAGACAACG+AGG | + | chr7_1:79582650-79582669 | None:intergenic | 35.0% | |
TGAGTAGCTTCTTTGAATTG+AGG | + | chr7_1:79582872-79582891 | None:intergenic | 35.0% | |
TACTCAAAAAGGTCCTCTTT+GGG | - | chr7_1:79582886-79582905 | Msa1041900:CDS | 35.0% | |
TACTGGAAATGACTATACAC+TGG | - | chr7_1:79583090-79583109 | Msa1041900:CDS | 35.0% | |
! | GAGGGTACACAATTTCAAAA+GGG | + | chr7_1:79583173-79583192 | None:intergenic | 35.0% |
! | AGAGGGTACACAATTTCAAA+AGG | + | chr7_1:79583174-79583193 | None:intergenic | 35.0% |
! | GAAATTTATTGAGGGGTACA+AGG | - | chr7_1:79583281-79583300 | Msa1041900:CDS | 35.0% |
!! | CAATAGGAATGGGTTTTTGA+AGG | + | chr7_1:79583372-79583391 | None:intergenic | 35.0% |
CTAGTTGGAGCTATGAATAT+TGG | + | chr7_1:79583504-79583523 | None:intergenic | 35.0% | |
CAATATTCATAGCTCCAACT+AGG | - | chr7_1:79583502-79583521 | Msa1041900:CDS | 35.0% | |
AGGATAATGTGTGAAGAACA+TGG | - | chr7_1:79583603-79583622 | Msa1041900:CDS | 35.0% | |
TACTACAAAAAGACCAAGGA+AGG | - | chr7_1:79583678-79583697 | Msa1041900:intron | 35.0% | |
TGATGATCATAGTACTCATG+AGG | - | chr7_1:79583911-79583930 | Msa1041900:intron | 35.0% | |
GATGATCATAGTACTCATGA+GGG | - | chr7_1:79583912-79583931 | Msa1041900:intron | 35.0% | |
ATGATCATAGTACTCATGAG+GGG | - | chr7_1:79583913-79583932 | Msa1041900:intron | 35.0% | |
!!! | CCTCTTTTTTCTCTTATCCA+TGG | + | chr7_1:79583958-79583977 | None:intergenic | 35.0% |
CCATGGATAAGAGAAAAAAG+AGG | - | chr7_1:79583955-79583974 | Msa1041900:intron | 35.0% | |
AAGAGAAAAAAGAGGAGTAG+TGG | - | chr7_1:79583963-79583982 | Msa1041900:intron | 35.0% | |
TGATTCACAGCTGAAGAAAT+TGG | - | chr7_1:79584022-79584041 | Msa1041900:intron | 35.0% | |
CACAAAGACATTGGAACAAA+AGG | - | chr7_1:79584076-79584095 | Msa1041900:intron | 35.0% | |
TGGAACAAAAGGAAAAAGAG+AGG | - | chr7_1:79584087-79584106 | Msa1041900:intron | 35.0% | |
GGAACAAAAGGAAAAAGAGA+GGG | - | chr7_1:79584088-79584107 | Msa1041900:intron | 35.0% | |
GAAACAAGAGAAAGAAAGGT+TGG | - | chr7_1:79584133-79584152 | Msa1041900:intron | 35.0% | |
ACTCAATCTTCTTCTCATGA+TGG | - | chr7_1:79584266-79584285 | Msa1041900:intron | 35.0% | |
AATGATCAAAGGGAAGAACT+TGG | - | chr7_1:79584413-79584432 | Msa1041900:CDS | 35.0% | |
ATGATCAAAGGGAAGAACTT+GGG | - | chr7_1:79584414-79584433 | Msa1041900:CDS | 35.0% | |
!!! | AAACTTCAACTCACTGGTTT+TGG | + | chr7_1:79584568-79584587 | None:intergenic | 35.0% |
AAGAGCTAACTGAAGAAATG+AGG | - | chr7_1:79584635-79584654 | Msa1041900:CDS | 35.0% | |
AGAGCTAACTGAAGAAATGA+GGG | - | chr7_1:79584636-79584655 | Msa1041900:CDS | 35.0% | |
! | TATTCCATCAAGTGTTGTTG+GGG | - | chr7_1:79584844-79584863 | Msa1041900:five_prime_UTR | 35.0% |
TTATGCTTTGCAAATGGATC+TGG | - | chr7_1:79584911-79584930 | Msa1041900:five_prime_UTR | 35.0% | |
! | TGAGTCTTTTCATTGACGAC+AGG | - | chr7_1:79582254-79582273 | Msa1041900:three_prime_UTR | 40.0% |
GCTTCAACTCCTTCATTTAG+TGG | - | chr7_1:79582740-79582759 | Msa1041900:CDS | 40.0% | |
!! | GCTGAAACTACTGGTTTCAT+TGG | - | chr7_1:79582773-79582792 | Msa1041900:CDS | 40.0% |
!! | ATTGGTGTTGATGCTTCAAC+TGG | - | chr7_1:79582791-79582810 | Msa1041900:CDS | 40.0% |
TTGATGCTTCAACTGGAAGA+TGG | - | chr7_1:79582798-79582817 | Msa1041900:CDS | 40.0% | |
AGTGTAAGAGTCTCTTGTCT+AGG | + | chr7_1:79582824-79582843 | None:intergenic | 40.0% | |
CTACTCAAAAAGGTCCTCTT+TGG | - | chr7_1:79582885-79582904 | Msa1041900:CDS | 40.0% | |
! | CTAGAAAGTTGATCCCAAAG+AGG | + | chr7_1:79582902-79582921 | None:intergenic | 40.0% |
!! | CTCTTTGGGATCAACTTTCT+AGG | - | chr7_1:79582900-79582919 | Msa1041900:CDS | 40.0% |
TTGGGATCAACTTTCTAGGT+AGG | - | chr7_1:79582904-79582923 | Msa1041900:CDS | 40.0% | |
AGGAAGAGTCTGTGATTGAT+TGG | + | chr7_1:79583352-79583371 | None:intergenic | 40.0% | |
GTGAAGAACATGGCTATCAA+AGG | - | chr7_1:79583613-79583632 | Msa1041900:intron | 40.0% | |
AACATGGCTATCAAAGGAGT+GGG | - | chr7_1:79583619-79583638 | Msa1041900:intron | 40.0% | |
AAAGGAGTGGGAAAAAATGC+AGG | - | chr7_1:79583631-79583650 | Msa1041900:intron | 40.0% | |
AAGGAGTGGGAAAAAATGCA+GGG | - | chr7_1:79583632-79583651 | Msa1041900:intron | 40.0% | |
GAAAAGCAGGAAGACAAGAT+GGG | - | chr7_1:79583700-79583719 | Msa1041900:intron | 40.0% | |
! | CGTCAACTTGAAGCCTTATA+TGG | - | chr7_1:79583741-79583760 | Msa1041900:intron | 40.0% |
CAAAGAGAATGAGTTCTCCA+TGG | - | chr7_1:79583938-79583957 | Msa1041900:intron | 40.0% | |
TTCACAGCTGAAGAAATTGG+TGG | - | chr7_1:79584025-79584044 | Msa1041900:intron | 40.0% | |
GGAGAAACTCACAAAGACAT+TGG | - | chr7_1:79584067-79584086 | Msa1041900:intron | 40.0% | |
TGTTAAGAGAAGAAGAGTGG+AGG | - | chr7_1:79584111-79584130 | Msa1041900:intron | 40.0% | |
GGAGGAAACAAGAGAAAGAA+AGG | - | chr7_1:79584129-79584148 | Msa1041900:intron | 40.0% | |
TTTGGGCTAAAGAAAGAGCT+TGG | - | chr7_1:79584171-79584190 | Msa1041900:intron | 40.0% | |
AAAGAGCTTGGATTGAAGCT+AGG | - | chr7_1:79584183-79584202 | Msa1041900:intron | 40.0% | |
AAGAGCTTGGATTGAAGCTA+GGG | - | chr7_1:79584184-79584203 | Msa1041900:intron | 40.0% | |
! | GGGAGAGTACAAACAAATGA+TGG | - | chr7_1:79584434-79584453 | Msa1041900:CDS | 40.0% |
CCTCAGTACTCATCAAGAAT+GGG | + | chr7_1:79584499-79584518 | None:intergenic | 40.0% | |
!! | CCATTCTTGATGAGTACTGA+GGG | - | chr7_1:79584497-79584516 | Msa1041900:CDS | 40.0% |
TACTGAGGGAGGAAATATGT+GGG | - | chr7_1:79584511-79584530 | Msa1041900:CDS | 40.0% | |
GTGGGAGAATTACAACTTGA+AGG | - | chr7_1:79584529-79584548 | Msa1041900:CDS | 40.0% | |
GTTGTGAAACTTCAACTCAC+TGG | + | chr7_1:79584574-79584593 | None:intergenic | 40.0% | |
TTGGGGTATGACACTAATTC+AGG | - | chr7_1:79584861-79584880 | Msa1041900:five_prime_UTR | 40.0% | |
AAGATGTTAAGCGGCAGAGT+CGG | + | chr7_1:79582282-79582301 | None:intergenic | 45.0% | |
TACCAACAATTTCCCTACGG+CGG | - | chr7_1:79582547-79582566 | Msa1041900:three_prime_UTR | 45.0% | |
! | TGAAGGAGTTGAAGCACTAG+TGG | + | chr7_1:79582735-79582754 | None:intergenic | 45.0% |
!! | GTACGTAGCATGTGCTACTT+TGG | - | chr7_1:79583473-79583492 | Msa1041900:CDS | 45.0% |
GAACATGGCTATCAAAGGAG+TGG | - | chr7_1:79583618-79583637 | Msa1041900:intron | 45.0% | |
AAGACCAAGGAAGGAAAAGC+AGG | - | chr7_1:79583687-79583706 | Msa1041900:intron | 45.0% | |
!! | TCTTCCTGCTTTTCCTTCCT+TGG | + | chr7_1:79583694-79583713 | None:intergenic | 45.0% |
GGAAAAGCAGGAAGACAAGA+TGG | - | chr7_1:79583699-79583718 | Msa1041900:intron | 45.0% | |
TGTGGGAGTGAAGATGAAGA+AGG | + | chr7_1:79583780-79583799 | None:intergenic | 45.0% | |
CGAATTCAGTGGAGTTTGTG+AGG | + | chr7_1:79583875-79583894 | None:intergenic | 45.0% | |
CGATGATGTGTCGAATTCAG+TGG | + | chr7_1:79583886-79583905 | None:intergenic | 45.0% | |
TAGTGGAAGAAGCTTCTGGA+AGG | - | chr7_1:79583980-79583999 | Msa1041900:intron | 45.0% | |
TGGTGGAGAAGCAAGAAGAA+TGG | - | chr7_1:79584042-79584061 | Msa1041900:intron | 45.0% | |
GGAGAAGCAAGAAGAATGGT+TGG | - | chr7_1:79584046-79584065 | Msa1041900:intron | 45.0% | |
GGGTGTTAAGAGAAGAAGAG+TGG | - | chr7_1:79584108-79584127 | Msa1041900:intron | 45.0% | |
!! | AGCTAGGGATGCTGCTTTAA+TGG | - | chr7_1:79584199-79584218 | Msa1041900:intron | 45.0% |
GTTAACAATGGAGATGGAGC+TGG | - | chr7_1:79584374-79584393 | Msa1041900:CDS | 45.0% | |
! | CCCATTCTTGATGAGTACTG+AGG | - | chr7_1:79584496-79584515 | Msa1041900:CDS | 45.0% |
CCCTCAGTACTCATCAAGAA+TGG | + | chr7_1:79584500-79584519 | None:intergenic | 45.0% | |
!! | TTCTTGATGAGTACTGAGGG+AGG | - | chr7_1:79584500-79584519 | Msa1041900:CDS | 45.0% |
GTACTGAGGGAGGAAATATG+TGG | - | chr7_1:79584510-79584529 | Msa1041900:CDS | 45.0% | |
CATACCCCAACAACACTTGA+TGG | + | chr7_1:79584851-79584870 | None:intergenic | 45.0% | |
! | GTGTTGTTGATGTGGGTTGC+CGG | + | chr7_1:79582585-79582604 | None:intergenic | 50.0% |
ACAGTAACAGCAGCAACAGC+AGG | + | chr7_1:79582686-79582705 | None:intergenic | 50.0% | |
! | TGAAGCACTAGTGGTGGTGT+TGG | + | chr7_1:79582726-79582745 | None:intergenic | 50.0% |
! | AGGAGTTGAAGCACTAGTGG+TGG | + | chr7_1:79582732-79582751 | None:intergenic | 50.0% |
! | GGAGTAGTGGAAGAAGCTTC+TGG | - | chr7_1:79583976-79583995 | Msa1041900:intron | 50.0% |
CTCCGCCGTAGGGAAATTGT+TGG | + | chr7_1:79582552-79582571 | None:intergenic | 55.0% | |
! | TTGTTGATGTGGGTTGCCGG+CGG | + | chr7_1:79582582-79582601 | None:intergenic | 55.0% |
!! | AGTGGTGGTGTTGGTAGGAG+TGG | + | chr7_1:79582717-79582736 | None:intergenic | 55.0% |
!! | GCACTAGTGGTGGTGTTGGT+AGG | + | chr7_1:79582722-79582741 | None:intergenic | 55.0% |
! | TGTTGATGTGGGTTGCCGGC+GGG | + | chr7_1:79582581-79582600 | None:intergenic | 60.0% |
CGGGGAATAGCTCCGCCGTA+GGG | + | chr7_1:79582562-79582581 | None:intergenic | 65.0% | |
! | GTTGATGTGGGTTGCCGGCG+GGG | + | chr7_1:79582580-79582599 | None:intergenic | 65.0% |
GCGGGGAATAGCTCCGCCGT+AGG | + | chr7_1:79582563-79582582 | None:intergenic | 70.0% | |
ACGGCGGAGCTATTCCCCGC+CGG | - | chr7_1:79582563-79582582 | Msa1041900:three_prime_UTR | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 79582223 | 79585009 | 79582223 | ID=Msa1041900;Name=Msa1041900 |
chr7_1 | mRNA | 79582223 | 79585009 | 79582223 | ID=Msa1041900-mRNA-1;Parent=Msa1041900;Name=Msa1041900-mRNA-1;_AED=0.00;_eAED=0.00;_QI=172|1|1|1|1|1|2|432|499 |
chr7_1 | exon | 79582223 | 79583627 | 79582223 | ID=Msa1041900-mRNA-1:exon:21521;Parent=Msa1041900-mRNA-1 |
chr7_1 | exon | 79584311 | 79585009 | 79584311 | ID=Msa1041900-mRNA-1:exon:21520;Parent=Msa1041900-mRNA-1 |
chr7_1 | five_prime_UTR | 79584838 | 79585009 | 79584838 | ID=Msa1041900-mRNA-1:five_prime_utr;Parent=Msa1041900-mRNA-1 |
chr7_1 | CDS | 79584311 | 79584837 | 79584311 | ID=Msa1041900-mRNA-1:cds;Parent=Msa1041900-mRNA-1 |
chr7_1 | CDS | 79582655 | 79583627 | 79582655 | ID=Msa1041900-mRNA-1:cds;Parent=Msa1041900-mRNA-1 |
chr7_1 | three_prime_UTR | 79582223 | 79582654 | 79582223 | ID=Msa1041900-mRNA-1:three_prime_utr;Parent=Msa1041900-mRNA-1 |
Gene Sequence |
Protein sequence |