Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125000 | XP_039684219.1 | 95.208 | 480 | 15 | 3 | 23 | 499 | 1 | 475 | 0.0 | 951 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125000 | sp|Q9LZS0|PTL_ARATH | 45.390 | 423 | 166 | 12 | 23 | 409 | 1 | 394 | 1.53e-93 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125000 | A0A396H5V1 | 95.208 | 480 | 15 | 3 | 23 | 499 | 1 | 475 | 0.0 | 951 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1125000 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa1125000 | 0.821604 | 3.696447e-53 | -8.615850e-47 |
| Msa0003700 | Msa1125000 | 0.821528 | 3.849228e-53 | -8.615850e-47 |
| Msa0016670 | Msa1125000 | 0.816009 | 6.897356e-52 | -8.615850e-47 |
| Msa0017510 | Msa1125000 | 0.885760 | 6.157204e-72 | -8.615850e-47 |
| Msa0024210 | Msa1125000 | -0.802011 | 6.869397e-49 | -8.615850e-47 |
| Msa0028640 | Msa1125000 | 0.835879 | 1.297625e-56 | -8.615850e-47 |
| Msa0046100 | Msa1125000 | 0.808146 | 3.574880e-50 | -8.615850e-47 |
| Msa0050390 | Msa1125000 | 0.803156 | 3.986728e-49 | -8.615850e-47 |
| Msa0053780 | Msa1125000 | 0.819389 | 1.191917e-52 | -8.615850e-47 |
| Msa0072370 | Msa1125000 | 0.820522 | 6.561857e-53 | -8.615850e-47 |
| Msa0075220 | Msa1125000 | 0.815492 | 8.994394e-52 | -8.615850e-47 |
| Msa0076250 | Msa1125000 | 0.807946 | 3.942796e-50 | -8.615850e-47 |
| Msa0089630 | Msa1125000 | 0.800870 | 1.176306e-48 | -8.615850e-47 |
| Msa0101810 | Msa1125000 | -0.801083 | 1.064510e-48 | -8.615850e-47 |
| Msa0110970 | Msa1125000 | 0.866019 | 3.869850e-65 | -8.615850e-47 |
| Msa0118570 | Msa1125000 | 0.822646 | 2.119007e-53 | -8.615850e-47 |
| Msa0120020 | Msa1125000 | -0.801861 | 7.373854e-49 | -8.615850e-47 |
| Msa0120040 | Msa1125000 | -0.809095 | 2.241054e-50 | -8.615850e-47 |
| Msa0616220 | Msa1125000 | 0.803671 | 3.119552e-49 | -8.615850e-47 |
| Msa0627450 | Msa1125000 | 0.802773 | 4.783954e-49 | -8.615850e-47 |
| Msa0657970 | Msa1125000 | 0.812617 | 3.873862e-51 | -8.615850e-47 |
| Msa0669320 | Msa1125000 | 0.833819 | 4.284263e-56 | -8.615850e-47 |
| Msa0682620 | Msa1125000 | 0.810445 | 1.148400e-50 | -8.615850e-47 |
| Msa0683510 | Msa1125000 | 0.805851 | 1.093539e-49 | -8.615850e-47 |
| Msa0683570 | Msa1125000 | 0.822063 | 2.894629e-53 | -8.615850e-47 |
| Msa0688770 | Msa1125000 | 0.817377 | 3.403131e-52 | -8.615850e-47 |
| Msa0710800 | Msa1125000 | 0.812595 | 3.917808e-51 | -8.615850e-47 |
| Msa0729720 | Msa1125000 | 0.813828 | 2.100414e-51 | -8.615850e-47 |
| Msa0731940 | Msa1125000 | 0.801184 | 1.014698e-48 | -8.615850e-47 |
| Msa0741240 | Msa1125000 | 0.817258 | 3.619588e-52 | -8.615850e-47 |
| Msa0754520 | Msa1125000 | 0.801852 | 7.404019e-49 | -8.615850e-47 |
| Msa0762210 | Msa1125000 | 0.801967 | 7.012060e-49 | -8.615850e-47 |
| Msa0770080 | Msa1125000 | 0.822255 | 2.611992e-53 | -8.615850e-47 |
| Msa0777570 | Msa1125000 | -0.809334 | 1.992049e-50 | -8.615850e-47 |
| Msa0786500 | Msa1125000 | 0.808912 | 2.453064e-50 | -8.615850e-47 |
| Msa0803890 | Msa1125000 | 0.810680 | 1.021805e-50 | -8.615850e-47 |
| Msa0810220 | Msa1125000 | 0.801936 | 7.117046e-49 | -8.615850e-47 |
| Msa0810480 | Msa1125000 | 0.806097 | 9.706041e-50 | -8.615850e-47 |
| Msa0821760 | Msa1125000 | 0.813786 | 2.145495e-51 | -8.615850e-47 |
| Msa0822870 | Msa1125000 | 0.834056 | 3.737946e-56 | -8.615850e-47 |
| Msa0824660 | Msa1125000 | 0.803172 | 3.957853e-49 | -8.615850e-47 |
| Msa0824680 | Msa1125000 | 0.812240 | 4.683826e-51 | -8.615850e-47 |
| Msa0826130 | Msa1125000 | 0.811307 | 7.474180e-51 | -8.615850e-47 |
| Msa0828560 | Msa1125000 | 0.839653 | 1.393511e-57 | -8.615850e-47 |
| Msa0833220 | Msa1125000 | 0.806618 | 7.538559e-50 | -8.615850e-47 |
| Msa0841940 | Msa1125000 | 0.802411 | 5.683319e-49 | -8.615850e-47 |
| Msa0140780 | Msa1125000 | 0.820532 | 6.526385e-53 | -8.615850e-47 |
| Msa0157290 | Msa1125000 | 0.886219 | 4.138741e-72 | -8.615850e-47 |
| Msa0163980 | Msa1125000 | 0.803829 | 2.891437e-49 | -8.615850e-47 |
| Msa0169860 | Msa1125000 | 0.800352 | 1.500442e-48 | -8.615850e-47 |
| Msa0182680 | Msa1125000 | 0.808456 | 3.069702e-50 | -8.615850e-47 |
| Msa0194280 | Msa1125000 | 0.802252 | 6.126252e-49 | -8.615850e-47 |
| Msa0197420 | Msa1125000 | 0.801796 | 7.601712e-49 | -8.615850e-47 |
| Msa0197930 | Msa1125000 | 0.830959 | 2.189205e-55 | -8.615850e-47 |
| Msa0200260 | Msa1125000 | 0.823470 | 1.361623e-53 | -8.615850e-47 |
| Msa0215320 | Msa1125000 | -0.818306 | 2.099770e-52 | -8.615850e-47 |
| Msa0221290 | Msa1125000 | 0.804596 | 2.002704e-49 | -8.615850e-47 |
| Msa0223690 | Msa1125000 | 0.806725 | 7.155517e-50 | -8.615850e-47 |
| Msa0387510 | Msa1125000 | 0.805920 | 1.057348e-49 | -8.615850e-47 |
| Msa0388960 | Msa1125000 | 0.805777 | 1.133190e-49 | -8.615850e-47 |
| Msa0392420 | Msa1125000 | 0.823241 | 1.539778e-53 | -8.615850e-47 |
| Msa0392460 | Msa1125000 | 0.821078 | 4.889233e-53 | -8.615850e-47 |
| Msa0392490 | Msa1125000 | 0.830559 | 2.743952e-55 | -8.615850e-47 |
| Msa0392510 | Msa1125000 | 0.826869 | 2.141324e-54 | -8.615850e-47 |
| Msa0395790 | Msa1125000 | 0.809596 | 1.749672e-50 | -8.615850e-47 |
| Msa0410650 | Msa1125000 | 0.846913 | 1.610410e-59 | -8.615850e-47 |
| Msa0417270 | Msa1125000 | 0.814681 | 1.361448e-51 | -8.615850e-47 |
| Msa0417880 | Msa1125000 | 0.811427 | 7.039069e-51 | -8.615850e-47 |
| Msa0422850 | Msa1125000 | 0.822227 | 2.651256e-53 | -8.615850e-47 |
| Msa0422930 | Msa1125000 | 0.821746 | 3.426922e-53 | -8.615850e-47 |
| Msa0436490 | Msa1125000 | -0.802774 | 4.783650e-49 | -8.615850e-47 |
| Msa0440750 | Msa1125000 | 0.803071 | 4.153242e-49 | -8.615850e-47 |
| Msa0443260 | Msa1125000 | 0.827015 | 1.975874e-54 | -8.615850e-47 |
| Msa0450440 | Msa1125000 | 0.809666 | 1.690251e-50 | -8.615850e-47 |
| Msa0450720 | Msa1125000 | 0.801879 | 7.309687e-49 | -8.615850e-47 |
| Msa0461720 | Msa1125000 | 0.811060 | 8.454851e-51 | -8.615850e-47 |
| Msa0467430 | Msa1125000 | 0.810041 | 1.404023e-50 | -8.615850e-47 |
| Msa0469030 | Msa1125000 | 0.831352 | 1.752739e-55 | -8.615850e-47 |
| Msa0475790 | Msa1125000 | 0.804319 | 2.286591e-49 | -8.615850e-47 |
| Msa0480980 | Msa1125000 | 0.812208 | 4.759643e-51 | -8.615850e-47 |
| Msa1004550 | Msa1125000 | 0.817605 | 3.024409e-52 | -8.615850e-47 |
| Msa1004600 | Msa1125000 | 0.816159 | 6.385773e-52 | -8.615850e-47 |
| Msa1005870 | Msa1125000 | 0.829504 | 4.961719e-55 | -8.615850e-47 |
| Msa1007610 | Msa1125000 | -0.806793 | 6.923784e-50 | -8.615850e-47 |
| Msa1019430 | Msa1125000 | 0.818450 | 1.948363e-52 | -8.615850e-47 |
| Msa1019470 | Msa1125000 | 0.824742 | 6.845581e-54 | -8.615850e-47 |
| Msa1038930 | Msa1125000 | 0.803793 | 2.942127e-49 | -8.615850e-47 |
| Msa1040400 | Msa1125000 | 0.814319 | 1.636874e-51 | -8.615850e-47 |
| Msa1041900 | Msa1125000 | 0.905992 | 2.386031e-80 | -8.615850e-47 |
| Msa1043370 | Msa1125000 | 0.811347 | 7.326121e-51 | -8.615850e-47 |
| Msa1047980 | Msa1125000 | 0.825954 | 3.536843e-54 | -8.615850e-47 |
| Msa1051830 | Msa1125000 | 0.810575 | 1.076563e-50 | -8.615850e-47 |
| Msa1070000 | Msa1125000 | 0.811022 | 8.619055e-51 | -8.615850e-47 |
| Msa1075220 | Msa1125000 | -0.808642 | 2.801490e-50 | -8.615850e-47 |
| Msa1077180 | Msa1125000 | 0.815944 | 7.128975e-52 | -8.615850e-47 |
| Msa1080100 | Msa1125000 | 0.887683 | 1.150310e-72 | -8.615850e-47 |
| Msa1080240 | Msa1125000 | 0.902051 | 1.438734e-78 | -8.615850e-47 |
| Msa1085200 | Msa1125000 | 0.849784 | 2.589601e-60 | -8.615850e-47 |
| Msa1092010 | Msa1125000 | 0.829223 | 5.803754e-55 | -8.615850e-47 |
| Msa1093840 | Msa1125000 | 0.805136 | 1.544239e-49 | -8.615850e-47 |
| Msa1097640 | Msa1125000 | 0.804375 | 2.226865e-49 | -8.615850e-47 |
| Msa0239570 | Msa1125000 | 0.823564 | 1.294101e-53 | -8.615850e-47 |
| Msa0243100 | Msa1125000 | 0.833439 | 5.330135e-56 | -8.615850e-47 |
| Msa0244860 | Msa1125000 | 0.813273 | 2.781912e-51 | -8.615850e-47 |
| Msa0244960 | Msa1125000 | 0.805041 | 1.616583e-49 | -8.615850e-47 |
| Msa0257460 | Msa1125000 | 0.801601 | 8.335516e-49 | -8.615850e-47 |
| Msa0259380 | Msa1125000 | 0.800800 | 1.216000e-48 | -8.615850e-47 |
| Msa0259500 | Msa1125000 | 0.800230 | 1.588762e-48 | -8.615850e-47 |
| Msa0261340 | Msa1125000 | 0.831128 | 1.989276e-55 | -8.615850e-47 |
| Msa0264150 | Msa1125000 | 0.800066 | 1.715569e-48 | -8.615850e-47 |
| Msa0274290 | Msa1125000 | 0.810854 | 9.371843e-51 | -8.615850e-47 |
| Msa0283450 | Msa1125000 | 0.817482 | 3.223755e-52 | -8.615850e-47 |
| Msa0283520 | Msa1125000 | 0.811664 | 6.253761e-51 | -8.615850e-47 |
| Msa0287650 | Msa1125000 | 0.832882 | 7.335726e-56 | -8.615850e-47 |
| Msa0291540 | Msa1125000 | 0.801716 | 7.895265e-49 | -8.615850e-47 |
| Msa0292400 | Msa1125000 | 0.821298 | 4.348303e-53 | -8.615850e-47 |
| Msa0297740 | Msa1125000 | 0.806388 | 8.429691e-50 | -8.615850e-47 |
| Msa0300690 | Msa1125000 | 0.836923 | 7.040567e-57 | -8.615850e-47 |
| Msa0305700 | Msa1125000 | 0.830941 | 2.211610e-55 | -8.615850e-47 |
| Msa0316810 | Msa1125000 | 0.815323 | 9.805712e-52 | -8.615850e-47 |
| Msa0317280 | Msa1125000 | 0.841870 | 3.655293e-58 | -8.615850e-47 |
| Msa0332000 | Msa1125000 | 0.819087 | 1.396208e-52 | -8.615850e-47 |
| Msa0344570 | Msa1125000 | 0.812362 | 4.404670e-51 | -8.615850e-47 |
| Msa0345330 | Msa1125000 | 0.812323 | 4.492465e-51 | -8.615850e-47 |
| Msa0345410 | Msa1125000 | 0.809566 | 1.775946e-50 | -8.615850e-47 |
| Msa0357340 | Msa1125000 | 0.814703 | 1.346152e-51 | -8.615850e-47 |
| Msa0363070 | Msa1125000 | 0.825750 | 3.952974e-54 | -8.615850e-47 |
| Msa0363200 | Msa1125000 | 0.816252 | 6.086591e-52 | -8.615850e-47 |
| Msa1108160 | Msa1125000 | 0.811012 | 8.660688e-51 | -8.615850e-47 |
| Msa1121440 | Msa1125000 | 0.803768 | 2.978026e-49 | -8.615850e-47 |
| Msa1124680 | Msa1125000 | -0.810728 | 9.979319e-51 | -8.615850e-47 |
| Msa1125000 | Msa1127950 | 0.828651 | 7.985033e-55 | -8.615850e-47 |
| Msa1125000 | Msa1128710 | 0.812277 | 4.596931e-51 | -8.615850e-47 |
| Msa1125000 | Msa1130270 | -0.805246 | 1.464179e-49 | -8.615850e-47 |
| Msa1125000 | Msa1135390 | 0.820837 | 5.554556e-53 | -8.615850e-47 |
| Msa1125000 | Msa1137570 | 0.808814 | 2.574213e-50 | -8.615850e-47 |
| Msa1125000 | Msa1139810 | 0.812879 | 3.394100e-51 | -8.615850e-47 |
| Msa1125000 | Msa1140210 | 0.829358 | 5.381789e-55 | -8.615850e-47 |
| Msa1125000 | Msa1151910 | 0.837172 | 6.080018e-57 | -8.615850e-47 |
| Msa1125000 | Msa1162550 | -0.800900 | 1.160125e-48 | -8.615850e-47 |
| Msa1125000 | Msa1165020 | 0.801472 | 8.859554e-49 | -8.615850e-47 |
| Msa1125000 | Msa1167280 | 0.877940 | 4.198838e-69 | -8.615850e-47 |
| Msa1125000 | Msa1168160 | 0.804114 | 2.523592e-49 | -8.615850e-47 |
| Msa1125000 | Msa1169710 | 0.804451 | 2.146811e-49 | -8.615850e-47 |
| Msa1125000 | Msa1172450 | 0.815128 | 1.083611e-51 | -8.615850e-47 |
| Msa1125000 | Msa1173100 | 0.800214 | 1.600690e-48 | -8.615850e-47 |
| Msa1125000 | Msa1193290 | 0.801437 | 9.010021e-49 | -8.615850e-47 |
| Msa1125000 | Msa1201470 | 0.823804 | 1.137111e-53 | -8.615850e-47 |
| Msa1125000 | Msa1209460 | 0.802656 | 5.059674e-49 | -8.615850e-47 |
| Msa1125000 | Msa1218550 | 0.803940 | 2.742812e-49 | -8.615850e-47 |
| Msa1125000 | Msa1222970 | 0.819820 | 9.500495e-53 | -8.615850e-47 |
| Msa1125000 | Msa1225250 | 0.807913 | 4.007669e-50 | -8.615850e-47 |
| Msa1125000 | Msa1228210 | 0.822141 | 2.776219e-53 | -8.615850e-47 |
| Msa1125000 | Msa1236100 | 0.802343 | 5.868014e-49 | -8.615850e-47 |
| Msa1125000 | Msa1238930 | 0.806043 | 9.964887e-50 | -8.615850e-47 |
| Msa1125000 | Msa1240310 | 0.802064 | 6.699606e-49 | -8.615850e-47 |
| Msa1125000 | Msa1242220 | 0.807680 | 4.490242e-50 | -8.615850e-47 |
| Msa1125000 | Msa1242230 | 0.836616 | 8.431629e-57 | -8.615850e-47 |
| Msa1125000 | Msa1242240 | 0.832329 | 1.005788e-55 | -8.615850e-47 |
| Msa1125000 | Msa1252140 | 0.811253 | 7.678005e-51 | -8.615850e-47 |
| Msa1125000 | Msa1267220 | 0.836004 | 1.206038e-56 | -8.615850e-47 |
| Msa1125000 | Msa1271300 | 0.800957 | 1.129616e-48 | -8.615850e-47 |
| Msa1125000 | Msa1283840 | 0.815563 | 8.668962e-52 | -8.615850e-47 |
| Msa1125000 | Msa1283860 | 0.822368 | 2.459404e-53 | -8.615850e-47 |
| Msa1125000 | Msa1284260 | 0.828722 | 7.677916e-55 | -8.615850e-47 |
| Msa1125000 | Msa1293770 | 0.805662 | 1.198021e-49 | -8.615850e-47 |
| Msa1125000 | Msa1303250 | 0.818621 | 1.781777e-52 | -8.615850e-47 |
| Msa1125000 | Msa1308380 | 0.807667 | 4.518537e-50 | -8.615850e-47 |
| Msa1125000 | Msa1313150 | 0.801570 | 8.461043e-49 | -8.615850e-47 |
| Msa1125000 | Msa1320740 | 0.805950 | 1.042363e-49 | -8.615850e-47 |
| Msa1125000 | Msa1322860 | 0.837506 | 4.993737e-57 | -8.615850e-47 |
| Msa1125000 | Msa1322890 | 0.803685 | 3.098342e-49 | -8.615850e-47 |
| Msa1125000 | Msa1324500 | 0.813996 | 1.928427e-51 | -8.615850e-47 |
| Msa1125000 | Msa1327050 | 0.832295 | 1.025340e-55 | -8.615850e-47 |
| Msa1125000 | Msa1346370 | 0.821499 | 3.908815e-53 | -8.615850e-47 |
| Msa1125000 | Msa1351760 | 0.844772 | 6.146410e-59 | -8.615850e-47 |
| Msa1125000 | Msa1367080 | 0.815627 | 8.390769e-52 | -8.615850e-47 |
| Msa1125000 | Msa1374040 | 0.802490 | 5.472091e-49 | -8.615850e-47 |
| Msa1125000 | Msa1374550 | 0.865093 | 7.583858e-65 | -8.615850e-47 |
| Msa1125000 | Msa1409870 | 0.815946 | 7.123121e-52 | -8.615850e-47 |
| Msa1125000 | Msa1411700 | 0.813718 | 2.221411e-51 | -8.615850e-47 |
| Msa1125000 | Msa1430240 | 0.839104 | 1.934135e-57 | -8.615850e-47 |
| Msa1125000 | Msa1436570 | 0.807182 | 5.726650e-50 | -8.615850e-47 |
| Msa1125000 | Msa1438250 | 0.800972 | 1.121361e-48 | -8.615850e-47 |
| Msa1125000 | Msa1460020 | 0.808052 | 3.743380e-50 | -8.615850e-47 |
| Msa1125000 | Msa1461300 | 0.820467 | 6.756103e-53 | -8.615850e-47 |
| Msa0487570 | Msa1125000 | 0.826997 | 1.995395e-54 | -8.615850e-47 |
| Msa0487630 | Msa1125000 | 0.842739 | 2.150838e-58 | -8.615850e-47 |
| Msa0490390 | Msa1125000 | 0.801219 | 9.983122e-49 | -8.615850e-47 |
| Msa0495320 | Msa1125000 | 0.803634 | 3.174606e-49 | -8.615850e-47 |
| Msa0498060 | Msa1125000 | 0.820003 | 8.628625e-53 | -8.615850e-47 |
| Msa0503580 | Msa1125000 | 0.814168 | 1.767816e-51 | -8.615850e-47 |
| Msa0503590 | Msa1125000 | 0.801944 | 7.089759e-49 | -8.615850e-47 |
| Msa0507680 | Msa1125000 | 0.844650 | 6.628763e-59 | -8.615850e-47 |
| Msa0509610 | Msa1125000 | 0.821217 | 4.540924e-53 | -8.615850e-47 |
| Msa0510980 | Msa1125000 | 0.806595 | 7.622182e-50 | -8.615850e-47 |
| Msa0518690 | Msa1125000 | 0.807028 | 6.173948e-50 | -8.615850e-47 |
| Msa0522590 | Msa1125000 | -0.814805 | 1.277733e-51 | -8.615850e-47 |
| Msa0523460 | Msa1125000 | 0.818704 | 1.706080e-52 | -8.615850e-47 |
| Msa0527550 | Msa1125000 | 0.833767 | 4.413675e-56 | -8.615850e-47 |
| Msa0535040 | Msa1125000 | 0.804662 | 1.940128e-49 | -8.615850e-47 |
| Msa0571140 | Msa1125000 | 0.817037 | 4.058647e-52 | -8.615850e-47 |
| Msa0574890 | Msa1125000 | 0.870595 | 1.296321e-66 | -8.615850e-47 |
| Msa0581760 | Msa1125000 | 0.804583 | 2.014449e-49 | -8.615850e-47 |
| Msa0585300 | Msa1125000 | 0.802314 | 5.950392e-49 | -8.615850e-47 |
| Msa0594660 | Msa1125000 | 0.822097 | 2.842451e-53 | -8.615850e-47 |
| Msa0601750 | Msa1125000 | 0.825346 | 4.927274e-54 | -8.615850e-47 |
| Msa0602240 | Msa1125000 | 0.814598 | 1.420079e-51 | -8.615850e-47 |
| Msa0602250 | Msa1125000 | 0.815922 | 7.213312e-52 | -8.615850e-47 |
| Msa0843220 | Msa1125000 | 0.826806 | 2.216732e-54 | -8.615850e-47 |
| Msa0849100 | Msa1125000 | 0.845867 | 3.105636e-59 | -8.615850e-47 |
| Msa0861510 | Msa1125000 | 0.802652 | 5.068848e-49 | -8.615850e-47 |
| Msa0861600 | Msa1125000 | 0.802709 | 4.933129e-49 | -8.615850e-47 |
| Msa0861870 | Msa1125000 | 0.826354 | 2.841368e-54 | -8.615850e-47 |
| Msa0866270 | Msa1125000 | 0.806728 | 7.143467e-50 | -8.615850e-47 |
| Msa0867890 | Msa1125000 | 0.804232 | 2.384088e-49 | -8.615850e-47 |
| Msa0878290 | Msa1125000 | 0.806437 | 8.230808e-50 | -8.615850e-47 |
| Msa0880140 | Msa1125000 | 0.884465 | 1.873394e-71 | -8.615850e-47 |
| Msa0880780 | Msa1125000 | 0.800022 | 1.751116e-48 | -8.615850e-47 |
| Msa0890320 | Msa1125000 | 0.807533 | 4.825783e-50 | -8.615850e-47 |
| Msa0896220 | Msa1125000 | 0.810163 | 1.321327e-50 | -8.615850e-47 |
| Msa0896970 | Msa1125000 | 0.813263 | 2.796519e-51 | -8.615850e-47 |
| Msa0908050 | Msa1125000 | 0.803811 | 2.917197e-49 | -8.615850e-47 |
| Msa0925180 | Msa1125000 | 0.849268 | 3.607003e-60 | -8.615850e-47 |
| Msa0930780 | Msa1125000 | 0.831571 | 1.547650e-55 | -8.615850e-47 |
| Msa0934890 | Msa1125000 | 0.811656 | 6.278458e-51 | -8.615850e-47 |
| Msa0936340 | Msa1125000 | 0.804937 | 1.699806e-49 | -8.615850e-47 |
| Msa0936410 | Msa1125000 | 0.825469 | 4.607704e-54 | -8.615850e-47 |
| Msa0944030 | Msa1125000 | 0.809799 | 1.582638e-50 | -8.615850e-47 |
| Msa0947660 | Msa1125000 | 0.811948 | 5.423379e-51 | -8.615850e-47 |
| Msa0967380 | Msa1125000 | 0.806890 | 6.601660e-50 | -8.615850e-47 |
| Msa0973250 | Msa1125000 | 0.810814 | 9.560507e-51 | -8.615850e-47 |
| Msa0975340 | Msa1125000 | 0.801566 | 8.476125e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125000 | MtrunA17_Chr7g0265831 | 95.208 | 480 | 15 | 3 | 23 | 499 | 1 | 475 | 0.0 | 951 |
| Msa1125000 | MtrunA17_Chr1g0179191 | 52.099 | 524 | 147 | 17 | 39 | 498 | 27 | 510 | 2.57e-152 | 444 |
| Msa1125000 | MtrunA17_Chr1g0198171 | 38.161 | 435 | 209 | 16 | 39 | 435 | 10 | 422 | 2.37e-79 | 256 |
| Msa1125000 | MtrunA17_Chr1g0201941 | 37.209 | 301 | 134 | 4 | 141 | 387 | 57 | 356 | 1.07e-48 | 177 |
| Msa1125000 | MtrunA17_Chr1g0201941 | 43.000 | 100 | 54 | 3 | 132 | 230 | 446 | 543 | 5.67e-18 | 87.0 |
| Msa1125000 | MtrunA17_Chr1g0201911 | 35.556 | 270 | 143 | 4 | 141 | 389 | 55 | 314 | 3.91e-39 | 149 |
| Msa1125000 | MtrunA17_Chr1g0201911 | 41.732 | 127 | 62 | 4 | 130 | 255 | 361 | 476 | 3.56e-20 | 93.6 |
| Msa1125000 | MtrunA17_Chr6g0463941 | 64.423 | 104 | 31 | 3 | 134 | 235 | 46 | 145 | 2.41e-34 | 136 |
| Msa1125000 | MtrunA17_Chr6g0463941 | 44.330 | 97 | 52 | 2 | 137 | 232 | 460 | 555 | 4.30e-19 | 90.5 |
| Msa1125000 | MtrunA17_Chr1g0190851 | 26.648 | 349 | 199 | 12 | 48 | 388 | 29 | 328 | 1.03e-15 | 79.7 |
| Msa1125000 | MtrunA17_Chr1g0190851 | 37.634 | 93 | 54 | 3 | 141 | 230 | 418 | 509 | 1.98e-11 | 66.2 |
| Msa1125000 | MtrunA17_Chr7g0273941 | 33.588 | 131 | 65 | 4 | 110 | 230 | 361 | 479 | 3.01e-14 | 75.1 |
| Msa1125000 | MtrunA17_Chr2g0290511 | 33.884 | 121 | 76 | 3 | 111 | 228 | 230 | 349 | 5.64e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125000 | AT5G03680.1 | 45.390 | 423 | 166 | 12 | 23 | 409 | 1 | 394 | 1.55e-94 | 298 |
| Msa1125000 | AT3G10000.1 | 39.872 | 469 | 223 | 11 | 69 | 499 | 34 | 481 | 6.54e-92 | 288 |
| Msa1125000 | AT3G10000.2 | 38.166 | 469 | 221 | 12 | 69 | 499 | 34 | 471 | 3.18e-82 | 263 |
| Msa1125000 | AT1G76890.2 | 34.727 | 311 | 141 | 7 | 134 | 388 | 34 | 338 | 4.57e-41 | 155 |
| Msa1125000 | AT1G76890.2 | 39.437 | 142 | 73 | 3 | 134 | 274 | 390 | 519 | 3.14e-20 | 94.4 |
| Msa1125000 | AT1G76880.1 | 55.856 | 111 | 43 | 2 | 121 | 231 | 46 | 150 | 1.26e-30 | 125 |
| Msa1125000 | AT1G76880.1 | 43.000 | 100 | 55 | 2 | 134 | 232 | 401 | 499 | 1.98e-17 | 85.9 |
| Msa1125000 | AT1G33240.3 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 4.64e-30 | 124 |
| Msa1125000 | AT1G33240.3 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.80e-16 | 82.0 |
| Msa1125000 | AT1G33240.1 | 60.606 | 99 | 35 | 2 | 141 | 239 | 62 | 156 | 5.62e-30 | 124 |
| Msa1125000 | AT1G33240.1 | 43.820 | 89 | 48 | 2 | 141 | 228 | 435 | 522 | 2.45e-16 | 82.4 |
| Msa1125000 | AT1G33240.2 | 43.820 | 89 | 48 | 2 | 141 | 228 | 396 | 483 | 2.77e-16 | 82.4 |
| Msa1125000 | AT1G33240.2 | 64.407 | 59 | 18 | 1 | 181 | 239 | 62 | 117 | 2.84e-15 | 79.0 |
| Msa1125000 | AT5G28300.1 | 38.614 | 101 | 50 | 4 | 141 | 230 | 459 | 558 | 1.68e-12 | 70.5 |
| Msa1125000 | AT5G47660.1 | 41.758 | 91 | 45 | 4 | 141 | 228 | 303 | 388 | 1.44e-11 | 66.6 |
Find 112 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGATATTATTACTTATT+AGG | 0.192936 | 7_3:+76288477 | Msa1125000:three_prime_UTR |
| GCAAAGCATAAATGATAATT+AGG | 0.220249 | 7_3:-76288699 | None:intergenic |
| AGCTAGGGATGCTGCTTTAA+TGG | 0.226192 | 7_3:+76287999 | Msa1125000:CDS |
| ATTATTGCTTTCTCCATATA+AGG | 0.243458 | 7_3:-76287554 | None:intergenic |
| CGTCAACTTGAAGCCTTATA+TGG | 0.244935 | 7_3:+76287541 | Msa1125000:CDS |
| AAATTTCAACTCACTGGTTT+TGG | 0.258916 | 7_3:-76288365 | None:intergenic |
| TATTACTTATTAGGTAATTA+AGG | 0.265081 | 7_3:+76288486 | Msa1125000:three_prime_UTR |
| TACTATCATAGTGTTGATTA+TGG | 0.322614 | 7_3:-76286262 | None:intergenic |
| TGATTCACAGCTGAAGAAAT+TGG | 0.325251 | 7_3:+76287822 | Msa1125000:CDS |
| TTGGGGTATGACACTAATTC+AGG | 0.332866 | 7_3:+76288661 | Msa1125000:three_prime_UTR |
| CTCTTTGGGATCAACTTTCT+AGG | 0.339621 | 7_3:+76286687 | Msa1125000:CDS |
| GCTTCAACTCCTTCATTTAG+TGG | 0.343719 | 7_3:+76286527 | Msa1125000:CDS |
| TATATTATAAGATAAGAAAA+AGG | 0.352475 | 7_3:-76286160 | None:intergenic |
| TTCAAAGAAGCTACTCAAAA+AGG | 0.354316 | 7_3:+76286662 | Msa1125000:CDS |
| GGAGTAGTGGAAGAAGCTTC+TGG | 0.362256 | 7_3:+76287776 | Msa1125000:CDS |
| TTGATCATTAACATCACAAT+AGG | 0.364480 | 7_3:-76288199 | None:intergenic |
| TTATGCTTTGCAAATGGATC+TGG | 0.367317 | 7_3:+76288711 | Msa1125000:three_prime_UTR |
| CATACCCCAACAACACTTGA+TGG | 0.388209 | 7_3:-76288648 | None:intergenic |
| AAATTGTTGGTAGTTGATCT+TGG | 0.391857 | 7_3:-76286323 | None:intergenic |
| ATTCAATTATCTCATGGAAA+TGG | 0.397721 | 7_3:+76286235 | Msa1125000:CDS |
| CACAAAGACATTGGAACAAA+AGG | 0.401812 | 7_3:+76287876 | Msa1125000:CDS |
| GTGTTGTTGATGTGGGTTGC+CGG | 0.402706 | 7_3:-76286369 | None:intergenic |
| ATATTCCATCAAGTGTTGTT+GGG | 0.413234 | 7_3:+76288643 | Msa1125000:three_prime_UTR |
| ATACTATTGAAATTTGAGAT+AGG | 0.414627 | 7_3:-76286209 | None:intergenic |
| TGTTGATGTGGGTTGCCGGC+GGG | 0.415527 | 7_3:-76286365 | None:intergenic |
| AATGATATGTAATTCATGTA+TGG | 0.419239 | 7_3:+76288769 | Msa1125000:three_prime_UTR |
| TATCATTTATGCTTTGCAAA+TGG | 0.427237 | 7_3:+76288705 | Msa1125000:three_prime_UTR |
| GAAACAAGAGAAAGAAAGGT+TGG | 0.430312 | 7_3:+76287933 | Msa1125000:CDS |
| CCCTCAGTACTCATCAAGAA+TGG | 0.434497 | 7_3:-76288297 | None:intergenic |
| GTTGTGAAATTTCAACTCAC+TGG | 0.445766 | 7_3:-76288371 | None:intergenic |
| TGTGGGAGTGAAGATGAAGA+AGG | 0.446001 | 7_3:-76287577 | None:intergenic |
| GGAGGAAACAAGAGAAAGAA+AGG | 0.446373 | 7_3:+76287929 | Msa1125000:CDS |
| GCTGAAACTACTGGTTTCAT+TGG | 0.454310 | 7_3:+76286560 | Msa1125000:CDS |
| ATGGGGACCATTACCCTTGT+TGG | 0.461250 | 7_3:+76286014 | None:intergenic |
| ATTGGTGTTGATGCTTCAAC+TGG | 0.466336 | 7_3:+76286578 | Msa1125000:CDS |
| AAACATTTCCTGATTGTTGT+TGG | 0.473343 | 7_3:-76287614 | None:intergenic |
| GGAGAAGCAAGAAGAATGGT+TGG | 0.477059 | 7_3:+76287846 | Msa1125000:CDS |
| AAAGAGCTTGGATTGAAGCT+AGG | 0.477669 | 7_3:+76287983 | Msa1125000:CDS |
| TTTGGGCTAAAGAAAGAGCT+TGG | 0.478480 | 7_3:+76287971 | Msa1125000:CDS |
| TATATTCCATCAAGTGTTGT+TGG | 0.481226 | 7_3:+76288642 | Msa1125000:three_prime_UTR |
| TATCACAGTGTTTGTTAATG+TGG | 0.481655 | 7_3:-76287642 | None:intergenic |
| GGAAAAGCAGGAAGACAAGA+TGG | 0.483853 | 7_3:+76287499 | Msa1125000:CDS |
| GTGGGAGAATTACAACTTGA+AGG | 0.483975 | 7_3:+76288329 | Msa1125000:CDS |
| ATTAAGACCAACAAGGGTAA+TGG | 0.488890 | 7_3:-76286021 | None:intergenic |
| AAGACCAAGGAAGGAAAAGC+AGG | 0.489921 | 7_3:+76287487 | Msa1125000:CDS |
| TGAGTAGCTTCTTTGAATTG+AGG | 0.494836 | 7_3:-76286656 | None:intergenic |
| ATCTCATAGTGTTGTTGATG+TGG | 0.498646 | 7_3:-76286377 | None:intergenic |
| TATAATGTTAACAATGGAGA+TGG | 0.503073 | 7_3:+76288168 | Msa1125000:CDS |
| AATGATCAAAGGGAAGAACT+TGG | 0.504968 | 7_3:+76288213 | Msa1125000:CDS |
| ACTCAATCTTCTTCTCATGA+TGG | 0.508615 | 7_3:+76288066 | Msa1125000:CDS |
| CACTATGAGATGATGATGTT+TGG | 0.510125 | 7_3:+76286389 | Msa1125000:CDS |
| TATCATATTCAATTATCTCA+TGG | 0.512431 | 7_3:+76286229 | Msa1125000:CDS |
| CCTCAGTACTCATCAAGAAT+GGG | 0.515932 | 7_3:-76288296 | None:intergenic |
| TTGTGATGTTAATGATCAAA+GGG | 0.516121 | 7_3:+76288203 | Msa1125000:CDS |
| TGGAAATAATAAGAAGAGAA+AGG | 0.518093 | 7_3:+76288086 | Msa1125000:CDS |
| ATCACAGTGTTTGTTAATGT+GGG | 0.521709 | 7_3:-76287641 | None:intergenic |
| TGTTTATATAATGTTAACAA+TGG | 0.527902 | 7_3:+76288162 | Msa1125000:CDS |
| TTGATGCTTCAACTGGAAGA+TGG | 0.530593 | 7_3:+76286585 | Msa1125000:CDS |
| CCATTCTTGATGAGTACTGA+GGG | 0.532198 | 7_3:+76288297 | Msa1125000:CDS |
| GGGTGTTAAGAGAAGAAGAG+TGG | 0.532295 | 7_3:+76287908 | Msa1125000:CDS |
| AAGAGCTTGGATTGAAGCTA+GGG | 0.532871 | 7_3:+76287984 | Msa1125000:CDS |
| TACTGAGGGAGGAAATATGT+GGG | 0.537099 | 7_3:+76288311 | Msa1125000:CDS |
| AACTTAGAAGCTGAAACTAC+TGG | 0.538788 | 7_3:+76286551 | Msa1125000:CDS |
| GTTGATGTGGGTTGCCGGCG+GGG | 0.539548 | 7_3:-76286364 | None:intergenic |
| ATTGTGATGTTAATGATCAA+AGG | 0.541913 | 7_3:+76288202 | Msa1125000:CDS |
| TCTAAGTTACCACTAAATGA+AGG | 0.544833 | 7_3:-76286536 | None:intergenic |
| AAGAGCTAACTGAAGAAATG+AGG | 0.545636 | 7_3:+76288435 | Msa1125000:three_prime_UTR |
| GCACTAGTGGTAGTGTTGGT+AGG | 0.547488 | 7_3:-76286506 | None:intergenic |
| TGGTGGAGAAGCAAGAAGAA+TGG | 0.548730 | 7_3:+76287842 | Msa1125000:CDS |
| TCTCATAGTGTTGTTGATGT+GGG | 0.555577 | 7_3:-76286376 | None:intergenic |
| CTCCGCCGTAGGGAAATTGT+TGG | 0.561007 | 7_3:-76286336 | None:intergenic |
| GTTAACAATGGAGATGGAGC+TGG | 0.562473 | 7_3:+76288174 | Msa1125000:CDS |
| TTGTTGATGTGGGTTGCCGG+CGG | 0.563154 | 7_3:-76286366 | None:intergenic |
| AGTGTAAGAGTCTCTTGTCT+AGG | 0.565795 | 7_3:-76286608 | None:intergenic |
| ATGATAACAACAATGTTGAT+CGG | 0.565825 | 7_3:+76288136 | Msa1125000:CDS |
| TTCACAGCTGAAGAAATTGG+TGG | 0.567445 | 7_3:+76287825 | Msa1125000:CDS |
| GGGAGAGTACAAACAAATGA+TGG | 0.567681 | 7_3:+76288234 | Msa1125000:CDS |
| ACAGTAACAGCAGCAACAGC+AGG | 0.567957 | 7_3:-76286470 | None:intergenic |
| GAAAAGCAGGAAGACAAGAT+GGG | 0.570202 | 7_3:+76287500 | Msa1125000:CDS |
| GCGGGGAATAGCTCCGCCGT+AGG | 0.579850 | 7_3:-76286347 | None:intergenic |
| TATTCCATCAAGTGTTGTTG+GGG | 0.581444 | 7_3:+76288644 | Msa1125000:three_prime_UTR |
| TGAAGCACTAGTGGTAGTGT+TGG | 0.582167 | 7_3:-76286510 | None:intergenic |
| CAAAGAGAATGAGTTCTCCA+TGG | 0.584262 | 7_3:+76287738 | Msa1125000:CDS |
| ATGATCAAAGGGAAGAACTT+GGG | 0.587215 | 7_3:+76288214 | Msa1125000:CDS |
| GGAGAAACTCACAAAGACAT+TGG | 0.587360 | 7_3:+76287867 | Msa1125000:CDS |
| CGGGGAATAGCTCCGCCGTA+GGG | 0.588808 | 7_3:-76286346 | None:intergenic |
| AACATGGCTATCAAAGGAGT+GGG | 0.590438 | 7_3:+76287419 | Msa1125000:CDS |
| AGTGGTAGTGTTGGTAGGAG+TGG | 0.591896 | 7_3:-76286501 | None:intergenic |
| CCCATTCTTGATGAGTACTG+AGG | 0.594659 | 7_3:+76288296 | Msa1125000:CDS |
| CTCAAATATTAAGACCAACA+AGG | 0.598102 | 7_3:-76286028 | None:intergenic |
| GTGAAGAACATGGCTATCAA+AGG | 0.598664 | 7_3:+76287413 | Msa1125000:CDS |
| AGGATAATGTGTGAAGAACA+TGG | 0.603245 | 7_3:+76287403 | Msa1125000:intron |
| CGAATTCAGTGGAGTTTGTG+AGG | 0.604333 | 7_3:-76287672 | None:intergenic |
| GAACATGGCTATCAAAGGAG+TGG | 0.606340 | 7_3:+76287418 | Msa1125000:CDS |
| AGAGCTAACTGAAGAAATGA+GGG | 0.609109 | 7_3:+76288436 | Msa1125000:three_prime_UTR |
| AAGATGTTAAGCGGCAGAGT+CGG | 0.611463 | 7_3:-76286072 | None:intergenic |
| TGATGATCATAGTACTCATG+AGG | 0.611714 | 7_3:+76287711 | Msa1125000:CDS |
| TGAAGGAGTTGAAGCACTAG+TGG | 0.611717 | 7_3:-76286519 | None:intergenic |
| TCAAATATTAAGACCAACAA+GGG | 0.614018 | 7_3:-76286027 | None:intergenic |
| GATGATCATAGTACTCATGA+GGG | 0.620992 | 7_3:+76287712 | Msa1125000:CDS |
| TGAAGATTGAAGATGTTAAG+CGG | 0.622485 | 7_3:-76286081 | None:intergenic |
| CGATGATGTGTCGAATTCAG+TGG | 0.625749 | 7_3:-76287683 | None:intergenic |
| AACTACCAACAATTTCCCTA+CGG | 0.632466 | 7_3:+76286331 | Msa1125000:CDS |
| TGTTAAGAGAAGAAGAGTGG+AGG | 0.635425 | 7_3:+76287911 | Msa1125000:CDS |
| TAGTGGAAGAAGCTTCTGGA+AGG | 0.636390 | 7_3:+76287780 | Msa1125000:CDS |
| CTAGAAAGTTGATCCCAAAG+AGG | 0.637397 | 7_3:-76286686 | None:intergenic |
| ACGGCGGAGCTATTCCCCGC+CGG | 0.640713 | 7_3:+76286350 | Msa1125000:CDS |
| GTACTGAGGGAGGAAATATG+TGG | 0.650852 | 7_3:+76288310 | Msa1125000:CDS |
| TACCAACAATTTCCCTACGG+CGG | 0.660564 | 7_3:+76286334 | Msa1125000:CDS |
| TTCTTGATGAGTACTGAGGG+AGG | 0.678329 | 7_3:+76288300 | Msa1125000:CDS |
| ATGATCATAGTACTCATGAG+GGG | 0.712141 | 7_3:+76287713 | Msa1125000:CDS |
| ACAAAATCATGAAGACAACG+AGG | 0.773702 | 7_3:-76286434 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATAAGATAAGAAAA+AGG | - | chr7_3:76286163-76286182 | None:intergenic | 10.0% |
| !! | TAAATAAAGAGATAATAAAA+GGG | - | chr7_3:76287014-76287033 | None:intergenic | 10.0% |
| !! | TTAAATAAAGAGATAATAAA+AGG | - | chr7_3:76287015-76287034 | None:intergenic | 10.0% |
| !!! | TTTATATTTTTTTGACAAAA+TGG | - | chr7_3:76288562-76288581 | None:intergenic | 10.0% |
| !! | TTGTCAAAAAAATATAAATA+TGG | + | chr7_3:76288564-76288583 | Msa1125000:three_prime_UTR | 10.0% |
| !! | TGTTTATATAATGTTAACAA+TGG | + | chr7_3:76288162-76288181 | Msa1125000:CDS | 15.0% |
| !! | TGATGATATTATTACTTATT+AGG | + | chr7_3:76288477-76288496 | Msa1125000:three_prime_UTR | 15.0% |
| !! | TATTACTTATTAGGTAATTA+AGG | + | chr7_3:76288486-76288505 | Msa1125000:three_prime_UTR | 15.0% |
| !!! | ATCAATATTTTTATCAATCT+CGG | + | chr7_3:76288515-76288534 | Msa1125000:three_prime_UTR | 15.0% |
| !!! | ATACTATTGAAATTTGAGAT+AGG | - | chr7_3:76286212-76286231 | None:intergenic | 20.0% |
| !! | TATCATATTCAATTATCTCA+TGG | + | chr7_3:76286229-76286248 | Msa1125000:CDS | 20.0% |
| !!! | TCATTTTCCTTCAAATTATT+TGG | + | chr7_3:76286737-76286756 | Msa1125000:intron | 20.0% |
| !! | AAACATACCAAATAATTTGA+AGG | - | chr7_3:76286747-76286766 | None:intergenic | 20.0% |
| !!! | TTTTTGTGGAATTTTTGTTA+AGG | + | chr7_3:76286860-76286879 | Msa1125000:intron | 20.0% |
| !!! | TTTAAAATACACTCAACTTT+CGG | + | chr7_3:76287030-76287049 | Msa1125000:intron | 20.0% |
| !!! | ATGTCATTTAAATTGTCAAT+AGG | - | chr7_3:76287186-76287205 | None:intergenic | 20.0% |
| !! | AAAACAACAAAAGCTTAATT+GGG | - | chr7_3:76287345-76287364 | None:intergenic | 20.0% |
| !! | AAAAACAACAAAAGCTTAAT+TGG | - | chr7_3:76287346-76287365 | None:intergenic | 20.0% |
| !!! | ACAACTTTTTTTTTCTTCTA+AGG | + | chr7_3:76288389-76288408 | Msa1125000:three_prime_UTR | 20.0% |
| !!! | ACAAAAAGTTAGTTTAATGA+TGG | + | chr7_3:76288614-76288633 | Msa1125000:three_prime_UTR | 20.0% |
| !!! | CAAAAAGTTAGTTTAATGAT+GGG | + | chr7_3:76288615-76288634 | Msa1125000:three_prime_UTR | 20.0% |
| !! | AATGATATGTAATTCATGTA+TGG | + | chr7_3:76288769-76288788 | Msa1125000:three_prime_UTR | 20.0% |
| ! | TCAAATATTAAGACCAACAA+GGG | - | chr7_3:76286030-76286049 | None:intergenic | 25.0% |
| ! | ATTCAATTATCTCATGGAAA+TGG | + | chr7_3:76286235-76286254 | Msa1125000:CDS | 25.0% |
| !!! | TACTATCATAGTGTTGATTA+TGG | - | chr7_3:76286265-76286284 | None:intergenic | 25.0% |
| ! | TTTGTGTTAACAAAAATGAG+TGG | + | chr7_3:76286764-76286783 | Msa1125000:intron | 25.0% |
| ! | TAATTATTTATGCTTGCACT+TGG | + | chr7_3:76286814-76286833 | Msa1125000:intron | 25.0% |
| ! | CAAAAATTCCACAAAAAGTA+GGG | - | chr7_3:76286857-76286876 | None:intergenic | 25.0% |
| ! | ACAAAAATTCCACAAAAAGT+AGG | - | chr7_3:76286858-76286877 | None:intergenic | 25.0% |
| !! | TTTTGTTAAGGTTCTTTTAC+TGG | + | chr7_3:76286872-76286891 | Msa1125000:intron | 25.0% |
| ! | AAAAAAGGTAGTACTAATCT+TGG | - | chr7_3:76286949-76286968 | None:intergenic | 25.0% |
| ! | ACAATTTCAAAAGGGAAAAA+AGG | - | chr7_3:76286964-76286983 | None:intergenic | 25.0% |
| ! | AATTAATATTGAACCCTAGT+TGG | - | chr7_3:76287318-76287337 | None:intergenic | 25.0% |
| ! | AAACAACAAAAGCTTAATTG+GGG | - | chr7_3:76287344-76287363 | None:intergenic | 25.0% |
| ! | ATTATTGCTTTCTCCATATA+AGG | - | chr7_3:76287557-76287576 | None:intergenic | 25.0% |
| !!! | TGGTACAAAAATTGTTTTGT+GGG | - | chr7_3:76287597-76287616 | None:intergenic | 25.0% |
| !!! | TTGGTACAAAAATTGTTTTG+TGG | - | chr7_3:76287598-76287617 | None:intergenic | 25.0% |
| !!! | TGGAAAAAGAGCATAATTTT+TGG | + | chr7_3:76287953-76287972 | Msa1125000:CDS | 25.0% |
| !!! | GGAAAAAGAGCATAATTTTT+GGG | + | chr7_3:76287954-76287973 | Msa1125000:CDS | 25.0% |
| ! | TGGAAATAATAAGAAGAGAA+AGG | + | chr7_3:76288086-76288105 | Msa1125000:CDS | 25.0% |
| ! | ATGATAACAACAATGTTGAT+CGG | + | chr7_3:76288136-76288155 | Msa1125000:CDS | 25.0% |
| ! | TATAATGTTAACAATGGAGA+TGG | + | chr7_3:76288168-76288187 | Msa1125000:CDS | 25.0% |
| ! | TTGATCATTAACATCACAAT+AGG | - | chr7_3:76288202-76288221 | None:intergenic | 25.0% |
| ! | ATTGTGATGTTAATGATCAA+AGG | + | chr7_3:76288202-76288221 | Msa1125000:CDS | 25.0% |
| ! | TTGTGATGTTAATGATCAAA+GGG | + | chr7_3:76288203-76288222 | Msa1125000:CDS | 25.0% |
| ! | GCAAAGCATAAATGATAATT+AGG | - | chr7_3:76288702-76288721 | None:intergenic | 25.0% |
| ! | TATCATTTATGCTTTGCAAA+TGG | + | chr7_3:76288705-76288724 | Msa1125000:three_prime_UTR | 25.0% |
| CTCAAATATTAAGACCAACA+AGG | - | chr7_3:76286031-76286050 | None:intergenic | 30.0% | |
| TGAAGATTGAAGATGTTAAG+CGG | - | chr7_3:76286084-76286103 | None:intergenic | 30.0% | |
| !! | AAATTGTTGGTAGTTGATCT+TGG | - | chr7_3:76286326-76286345 | None:intergenic | 30.0% |
| TCTAAGTTACCACTAAATGA+AGG | - | chr7_3:76286539-76286558 | None:intergenic | 30.0% | |
| TTCAAAGAAGCTACTCAAAA+AGG | + | chr7_3:76286662-76286681 | Msa1125000:CDS | 30.0% | |
| !!! | AATTTTGTCCCTACTTTTTG+TGG | + | chr7_3:76286846-76286865 | Msa1125000:intron | 30.0% |
| AACACTTTGCACTTAAAAGA+GGG | - | chr7_3:76286990-76287009 | None:intergenic | 30.0% | |
| AAACACTTTGCACTTAAAAG+AGG | - | chr7_3:76286991-76287010 | None:intergenic | 30.0% | |
| ! | TTTTGTGAGCAAATTCATTG+AGG | + | chr7_3:76287069-76287088 | Msa1125000:intron | 30.0% |
| TTTGTGAGCAAATTCATTGA+GGG | + | chr7_3:76287070-76287089 | Msa1125000:intron | 30.0% | |
| CTAATTCTATCTGTCTAACA+TGG | + | chr7_3:76287117-76287136 | Msa1125000:intron | 30.0% | |
| ! | CAATAGGAATGAGTTTTTGA+AGG | - | chr7_3:76287170-76287189 | None:intergenic | 30.0% |
| ACATATTACACGACAATACA+TGG | + | chr7_3:76287214-76287233 | Msa1125000:intron | 30.0% | |
| AATATTCATAGCTCCAACTA+GGG | + | chr7_3:76287302-76287321 | Msa1125000:intron | 30.0% | |
| AACAACAAAAGCTTAATTGG+GGG | - | chr7_3:76287343-76287362 | None:intergenic | 30.0% | |
| ! | CATTGCTTGTATTGATGTTA+AGG | + | chr7_3:76287383-76287402 | Msa1125000:intron | 30.0% |
| CAAATACTACAAAAAGACCA+AGG | + | chr7_3:76287474-76287493 | Msa1125000:CDS | 30.0% | |
| ! | TTTTTGTACCAACAACAATC+AGG | + | chr7_3:76287606-76287625 | Msa1125000:CDS | 30.0% |
| AAACATTTCCTGATTGTTGT+TGG | - | chr7_3:76287617-76287636 | None:intergenic | 30.0% | |
| ! | ATCACAGTGTTTGTTAATGT+GGG | - | chr7_3:76287644-76287663 | None:intergenic | 30.0% |
| ! | TATCACAGTGTTTGTTAATG+TGG | - | chr7_3:76287645-76287664 | None:intergenic | 30.0% |
| GAAGCTTTGCAAAAATTAAC+AGG | + | chr7_3:76288021-76288040 | Msa1125000:CDS | 30.0% | |
| !!! | AAATTTCAACTCACTGGTTT+TGG | - | chr7_3:76288368-76288387 | None:intergenic | 30.0% |
| ATCTCGGAGAGAAAAAAATA+TGG | + | chr7_3:76288531-76288550 | Msa1125000:three_prime_UTR | 30.0% | |
| ! | TGTCTTCAATTTTTCTGTTG+AGG | - | chr7_3:76288595-76288614 | None:intergenic | 30.0% |
| ! | TATATTCCATCAAGTGTTGT+TGG | + | chr7_3:76288642-76288661 | Msa1125000:three_prime_UTR | 30.0% |
| ! | ATATTCCATCAAGTGTTGTT+GGG | + | chr7_3:76288643-76288662 | Msa1125000:three_prime_UTR | 30.0% |
| ATTAAGACCAACAAGGGTAA+TGG | - | chr7_3:76286024-76286043 | None:intergenic | 35.0% | |
| AACTACCAACAATTTCCCTA+CGG | + | chr7_3:76286331-76286350 | Msa1125000:CDS | 35.0% | |
| ! | TCTCATAGTGTTGTTGATGT+GGG | - | chr7_3:76286379-76286398 | None:intergenic | 35.0% |
| ! | ATCTCATAGTGTTGTTGATG+TGG | - | chr7_3:76286380-76286399 | None:intergenic | 35.0% |
| ! | CACTATGAGATGATGATGTT+TGG | + | chr7_3:76286389-76286408 | Msa1125000:CDS | 35.0% |
| ACAAAATCATGAAGACAACG+AGG | - | chr7_3:76286437-76286456 | None:intergenic | 35.0% | |
| AACTTAGAAGCTGAAACTAC+TGG | + | chr7_3:76286551-76286570 | Msa1125000:CDS | 35.0% | |
| TGAGTAGCTTCTTTGAATTG+AGG | - | chr7_3:76286659-76286678 | None:intergenic | 35.0% | |
| TACTCAAAAAGGTCCTCTTT+GGG | + | chr7_3:76286673-76286692 | Msa1125000:CDS | 35.0% | |
| ! | GAGGGTACACAATTTCAAAA+GGG | - | chr7_3:76286972-76286991 | None:intergenic | 35.0% |
| ! | AGAGGGTACACAATTTCAAA+AGG | - | chr7_3:76286973-76286992 | None:intergenic | 35.0% |
| TTGTGAGCAAATTCATTGAG+GGG | + | chr7_3:76287071-76287090 | Msa1125000:intron | 35.0% | |
| CTAGTTGGAGCTATGAATAT+TGG | - | chr7_3:76287303-76287322 | None:intergenic | 35.0% | |
| CAATATTCATAGCTCCAACT+AGG | + | chr7_3:76287301-76287320 | Msa1125000:intron | 35.0% | |
| AGGATAATGTGTGAAGAACA+TGG | + | chr7_3:76287403-76287422 | Msa1125000:intron | 35.0% | |
| TACTACAAAAAGACCAAGGA+AGG | + | chr7_3:76287478-76287497 | Msa1125000:CDS | 35.0% | |
| TGATGATCATAGTACTCATG+AGG | + | chr7_3:76287711-76287730 | Msa1125000:CDS | 35.0% | |
| GATGATCATAGTACTCATGA+GGG | + | chr7_3:76287712-76287731 | Msa1125000:CDS | 35.0% | |
| ATGATCATAGTACTCATGAG+GGG | + | chr7_3:76287713-76287732 | Msa1125000:CDS | 35.0% | |
| !!! | CCTCTTTTTTCTCTTATCCA+TGG | - | chr7_3:76287758-76287777 | None:intergenic | 35.0% |
| CCATGGATAAGAGAAAAAAG+AGG | + | chr7_3:76287755-76287774 | Msa1125000:CDS | 35.0% | |
| AAGAGAAAAAAGAGGAGTAG+TGG | + | chr7_3:76287763-76287782 | Msa1125000:CDS | 35.0% | |
| TGATTCACAGCTGAAGAAAT+TGG | + | chr7_3:76287822-76287841 | Msa1125000:CDS | 35.0% | |
| CACAAAGACATTGGAACAAA+AGG | + | chr7_3:76287876-76287895 | Msa1125000:CDS | 35.0% | |
| TGGAACAAAAGGAAAAAGAG+AGG | + | chr7_3:76287887-76287906 | Msa1125000:CDS | 35.0% | |
| GGAACAAAAGGAAAAAGAGA+GGG | + | chr7_3:76287888-76287907 | Msa1125000:CDS | 35.0% | |
| GAAACAAGAGAAAGAAAGGT+TGG | + | chr7_3:76287933-76287952 | Msa1125000:CDS | 35.0% | |
| ACTCAATCTTCTTCTCATGA+TGG | + | chr7_3:76288066-76288085 | Msa1125000:CDS | 35.0% | |
| AATGATCAAAGGGAAGAACT+TGG | + | chr7_3:76288213-76288232 | Msa1125000:CDS | 35.0% | |
| ATGATCAAAGGGAAGAACTT+GGG | + | chr7_3:76288214-76288233 | Msa1125000:CDS | 35.0% | |
| GTTGTGAAATTTCAACTCAC+TGG | - | chr7_3:76288374-76288393 | None:intergenic | 35.0% | |
| AAGAGCTAACTGAAGAAATG+AGG | + | chr7_3:76288435-76288454 | Msa1125000:three_prime_UTR | 35.0% | |
| AGAGCTAACTGAAGAAATGA+GGG | + | chr7_3:76288436-76288455 | Msa1125000:three_prime_UTR | 35.0% | |
| ! | TATTCCATCAAGTGTTGTTG+GGG | + | chr7_3:76288644-76288663 | Msa1125000:three_prime_UTR | 35.0% |
| TTATGCTTTGCAAATGGATC+TGG | + | chr7_3:76288711-76288730 | Msa1125000:three_prime_UTR | 35.0% | |
| ! | TGAGTCTTTTCATTGACGAC+AGG | + | chr7_3:76286047-76286066 | Msa1125000:five_prime_UTR | 40.0% |
| GCTTCAACTCCTTCATTTAG+TGG | + | chr7_3:76286527-76286546 | Msa1125000:CDS | 40.0% | |
| !! | GCTGAAACTACTGGTTTCAT+TGG | + | chr7_3:76286560-76286579 | Msa1125000:CDS | 40.0% |
| !! | ATTGGTGTTGATGCTTCAAC+TGG | + | chr7_3:76286578-76286597 | Msa1125000:CDS | 40.0% |
| TTGATGCTTCAACTGGAAGA+TGG | + | chr7_3:76286585-76286604 | Msa1125000:CDS | 40.0% | |
| AGTGTAAGAGTCTCTTGTCT+AGG | - | chr7_3:76286611-76286630 | None:intergenic | 40.0% | |
| CTACTCAAAAAGGTCCTCTT+TGG | + | chr7_3:76286672-76286691 | Msa1125000:CDS | 40.0% | |
| ! | CTAGAAAGTTGATCCCAAAG+AGG | - | chr7_3:76286689-76286708 | None:intergenic | 40.0% |
| !! | CTCTTTGGGATCAACTTTCT+AGG | + | chr7_3:76286687-76286706 | Msa1125000:CDS | 40.0% |
| TTGGGATCAACTTTCTAGGT+AGG | + | chr7_3:76286691-76286710 | Msa1125000:intron | 40.0% | |
| TGTGAGCAAATTCATTGAGG+GGG | + | chr7_3:76287072-76287091 | Msa1125000:intron | 40.0% | |
| ! | AAATTCATTGAGGGGGTACA+AGG | + | chr7_3:76287079-76287098 | Msa1125000:intron | 40.0% |
| ! | AATTCATTGAGGGGGTACAA+GGG | + | chr7_3:76287080-76287099 | Msa1125000:intron | 40.0% |
| AGGAAGAGTCTGTGATTGAT+TGG | - | chr7_3:76287150-76287169 | None:intergenic | 40.0% | |
| !! | GTACGTAGCATGTGTTACTT+TGG | + | chr7_3:76287272-76287291 | Msa1125000:intron | 40.0% |
| GTGAAGAACATGGCTATCAA+AGG | + | chr7_3:76287413-76287432 | Msa1125000:CDS | 40.0% | |
| AACATGGCTATCAAAGGAGT+GGG | + | chr7_3:76287419-76287438 | Msa1125000:CDS | 40.0% | |
| AAAGGAGTGGGAAAAAATGC+AGG | + | chr7_3:76287431-76287450 | Msa1125000:CDS | 40.0% | |
| AAGGAGTGGGAAAAAATGCA+GGG | + | chr7_3:76287432-76287451 | Msa1125000:CDS | 40.0% | |
| GAAAAGCAGGAAGACAAGAT+GGG | + | chr7_3:76287500-76287519 | Msa1125000:CDS | 40.0% | |
| ! | CGTCAACTTGAAGCCTTATA+TGG | + | chr7_3:76287541-76287560 | Msa1125000:CDS | 40.0% |
| CAAAGAGAATGAGTTCTCCA+TGG | + | chr7_3:76287738-76287757 | Msa1125000:CDS | 40.0% | |
| TTCACAGCTGAAGAAATTGG+TGG | + | chr7_3:76287825-76287844 | Msa1125000:CDS | 40.0% | |
| GGAGAAACTCACAAAGACAT+TGG | + | chr7_3:76287867-76287886 | Msa1125000:CDS | 40.0% | |
| TGTTAAGAGAAGAAGAGTGG+AGG | + | chr7_3:76287911-76287930 | Msa1125000:CDS | 40.0% | |
| GGAGGAAACAAGAGAAAGAA+AGG | + | chr7_3:76287929-76287948 | Msa1125000:CDS | 40.0% | |
| TTTGGGCTAAAGAAAGAGCT+TGG | + | chr7_3:76287971-76287990 | Msa1125000:CDS | 40.0% | |
| AAAGAGCTTGGATTGAAGCT+AGG | + | chr7_3:76287983-76288002 | Msa1125000:CDS | 40.0% | |
| AAGAGCTTGGATTGAAGCTA+GGG | + | chr7_3:76287984-76288003 | Msa1125000:CDS | 40.0% | |
| ! | GGGAGAGTACAAACAAATGA+TGG | + | chr7_3:76288234-76288253 | Msa1125000:CDS | 40.0% |
| CCTCAGTACTCATCAAGAAT+GGG | - | chr7_3:76288299-76288318 | None:intergenic | 40.0% | |
| !! | CCATTCTTGATGAGTACTGA+GGG | + | chr7_3:76288297-76288316 | Msa1125000:CDS | 40.0% |
| TACTGAGGGAGGAAATATGT+GGG | + | chr7_3:76288311-76288330 | Msa1125000:CDS | 40.0% | |
| GTGGGAGAATTACAACTTGA+AGG | + | chr7_3:76288329-76288348 | Msa1125000:CDS | 40.0% | |
| TTGGGGTATGACACTAATTC+AGG | + | chr7_3:76288661-76288680 | Msa1125000:three_prime_UTR | 40.0% | |
| AAGATGTTAAGCGGCAGAGT+CGG | - | chr7_3:76286075-76286094 | None:intergenic | 45.0% | |
| TACCAACAATTTCCCTACGG+CGG | + | chr7_3:76286334-76286353 | Msa1125000:CDS | 45.0% | |
| ! | TGAAGCACTAGTGGTAGTGT+TGG | - | chr7_3:76286513-76286532 | None:intergenic | 45.0% |
| ! | TGAAGGAGTTGAAGCACTAG+TGG | - | chr7_3:76286522-76286541 | None:intergenic | 45.0% |
| GAACATGGCTATCAAAGGAG+TGG | + | chr7_3:76287418-76287437 | Msa1125000:CDS | 45.0% | |
| AAGACCAAGGAAGGAAAAGC+AGG | + | chr7_3:76287487-76287506 | Msa1125000:CDS | 45.0% | |
| !! | TCTTCCTGCTTTTCCTTCCT+TGG | - | chr7_3:76287494-76287513 | None:intergenic | 45.0% |
| GGAAAAGCAGGAAGACAAGA+TGG | + | chr7_3:76287499-76287518 | Msa1125000:CDS | 45.0% | |
| TGTGGGAGTGAAGATGAAGA+AGG | - | chr7_3:76287580-76287599 | None:intergenic | 45.0% | |
| CGAATTCAGTGGAGTTTGTG+AGG | - | chr7_3:76287675-76287694 | None:intergenic | 45.0% | |
| CGATGATGTGTCGAATTCAG+TGG | - | chr7_3:76287686-76287705 | None:intergenic | 45.0% | |
| TAGTGGAAGAAGCTTCTGGA+AGG | + | chr7_3:76287780-76287799 | Msa1125000:CDS | 45.0% | |
| TGGTGGAGAAGCAAGAAGAA+TGG | + | chr7_3:76287842-76287861 | Msa1125000:CDS | 45.0% | |
| GGAGAAGCAAGAAGAATGGT+TGG | + | chr7_3:76287846-76287865 | Msa1125000:CDS | 45.0% | |
| GGGTGTTAAGAGAAGAAGAG+TGG | + | chr7_3:76287908-76287927 | Msa1125000:CDS | 45.0% | |
| !! | AGCTAGGGATGCTGCTTTAA+TGG | + | chr7_3:76287999-76288018 | Msa1125000:CDS | 45.0% |
| GTTAACAATGGAGATGGAGC+TGG | + | chr7_3:76288174-76288193 | Msa1125000:CDS | 45.0% | |
| ! | CCCATTCTTGATGAGTACTG+AGG | + | chr7_3:76288296-76288315 | Msa1125000:CDS | 45.0% |
| CCCTCAGTACTCATCAAGAA+TGG | - | chr7_3:76288300-76288319 | None:intergenic | 45.0% | |
| !! | TTCTTGATGAGTACTGAGGG+AGG | + | chr7_3:76288300-76288319 | Msa1125000:CDS | 45.0% |
| GTACTGAGGGAGGAAATATG+TGG | + | chr7_3:76288310-76288329 | Msa1125000:CDS | 45.0% | |
| CATACCCCAACAACACTTGA+TGG | - | chr7_3:76288651-76288670 | None:intergenic | 45.0% | |
| ! | GTGTTGTTGATGTGGGTTGC+CGG | - | chr7_3:76286372-76286391 | None:intergenic | 50.0% |
| ACAGTAACAGCAGCAACAGC+AGG | - | chr7_3:76286473-76286492 | None:intergenic | 50.0% | |
| !! | AGTGGTAGTGTTGGTAGGAG+TGG | - | chr7_3:76286504-76286523 | None:intergenic | 50.0% |
| !! | GCACTAGTGGTAGTGTTGGT+AGG | - | chr7_3:76286509-76286528 | None:intergenic | 50.0% |
| ! | GGAGTAGTGGAAGAAGCTTC+TGG | + | chr7_3:76287776-76287795 | Msa1125000:CDS | 50.0% |
| CTCCGCCGTAGGGAAATTGT+TGG | - | chr7_3:76286339-76286358 | None:intergenic | 55.0% | |
| ! | TTGTTGATGTGGGTTGCCGG+CGG | - | chr7_3:76286369-76286388 | None:intergenic | 55.0% |
| ! | TGTTGATGTGGGTTGCCGGC+GGG | - | chr7_3:76286368-76286387 | None:intergenic | 60.0% |
| CGGGGAATAGCTCCGCCGTA+GGG | - | chr7_3:76286349-76286368 | None:intergenic | 65.0% | |
| ! | GTTGATGTGGGTTGCCGGCG+GGG | - | chr7_3:76286367-76286386 | None:intergenic | 65.0% |
| GCGGGGAATAGCTCCGCCGT+AGG | - | chr7_3:76286350-76286369 | None:intergenic | 70.0% | |
| ACGGCGGAGCTATTCCCCGC+CGG | + | chr7_3:76286350-76286369 | Msa1125000:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 76286016 | 76288809 | 76286016 | ID=Msa1125000;Name=Msa1125000 |
| chr7_3 | mRNA | 76286016 | 76288809 | 76286016 | ID=Msa1125000-mRNA-1;Parent=Msa1125000;Name=Msa1125000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=166|1|1|1|1|1|2|432|499 |
| chr7_3 | exon | 76286016 | 76286708 | 76286016 | ID=Msa1125000-mRNA-1:exon:20702;Parent=Msa1125000-mRNA-1 |
| chr7_3 | exon | 76287405 | 76288809 | 76287405 | ID=Msa1125000-mRNA-1:exon:20703;Parent=Msa1125000-mRNA-1 |
| chr7_3 | five_prime_UTR | 76286016 | 76286181 | 76286016 | ID=Msa1125000-mRNA-1:five_prime_utr;Parent=Msa1125000-mRNA-1 |
| chr7_3 | CDS | 76286182 | 76286708 | 76286182 | ID=Msa1125000-mRNA-1:cds;Parent=Msa1125000-mRNA-1 |
| chr7_3 | CDS | 76287405 | 76288377 | 76287405 | ID=Msa1125000-mRNA-1:cds;Parent=Msa1125000-mRNA-1 |
| chr7_3 | three_prime_UTR | 76288378 | 76288809 | 76288378 | ID=Msa1125000-mRNA-1:three_prime_utr;Parent=Msa1125000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
