AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0239570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239570 MtrunA17_Chr2g0290471 97.786 271 4 2 1 271 1 269 9.71e-179 492
Msa0239570 MtrunA17_Chr8g0386231 46.691 272 112 4 33 271 50 321 7.10e-62 197
Msa0239570 MtrunA17_Chr3g0132061 50.000 270 100 4 35 271 35 302 2.13e-55 180
Msa0239570 MtrunA17_Chr3g0132051 52.083 240 104 5 35 271 35 266 4.12e-53 173
Msa0239570 MtrunA17_Chr3g0128091 39.161 286 141 6 6 270 10 283 2.83e-38 135
Msa0239570 MtrunA17_Chr3g0094841 36.709 237 122 5 36 271 28 237 3.41e-38 134
Msa0239570 MtrunA17_Chr8g0337951 38.431 255 138 5 25 270 20 264 6.96e-35 126
Msa0239570 MtrunA17_Chr4g0001151 58.333 132 50 2 35 166 169 295 1.19e-33 124
Msa0239570 MtrunA17_Chr4g0028461 34.231 260 142 5 37 271 69 324 3.33e-31 118
Msa0239570 MtrunA17_Chr5g0429111 36.646 161 92 3 37 197 56 206 8.16e-27 106
Msa0239570 MtrunA17_Chr7g0264601 38.500 200 92 5 23 198 3 195 1.01e-26 106
Msa0239570 MtrunA17_Chr1g0180631 28.097 331 161 9 17 271 4 333 1.06e-23 98.2
Msa0239570 MtrunA17_Chr8g0343041 41.176 68 40 0 130 197 71 138 2.50e-12 65.9
Msa0239570 MtrunA17_Chr4g0036931 41.463 82 47 1 23 104 17 97 4.70e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0239570 AT5G50740.5 46.094 256 117 5 36 271 29 283 3.19e-61 195
Msa0239570 AT5G50740.1 46.094 256 117 5 36 271 29 283 3.19e-61 195
Msa0239570 AT5G50740.3 46.094 256 117 5 36 271 36 290 5.18e-61 195
Msa0239570 AT3G02960.1 36.567 268 143 4 4 271 6 246 9.68e-50 164
Msa0239570 AT5G63530.2 45.423 284 106 4 35 271 59 340 2.17e-49 166
Msa0239570 AT5G63530.1 45.423 284 106 4 35 271 74 355 3.29e-49 166
Msa0239570 AT5G50740.2 56.911 123 52 1 36 158 29 150 6.50e-39 134
Msa0239570 AT5G50740.4 56.911 123 52 1 36 158 36 157 2.66e-38 132
Msa0239570 AT5G24580.4 29.259 270 147 5 36 270 58 318 6.28e-31 117
Msa0239570 AT5G24580.1 29.259 270 147 5 36 270 58 318 6.28e-31 117
Msa0239570 AT5G24580.2 29.259 270 147 5 36 270 57 317 7.91e-31 117
Msa0239570 AT5G60800.1 35.249 261 139 5 36 271 28 283 6.06e-29 111
Msa0239570 AT5G60800.2 34.866 261 140 5 36 271 28 283 7.46e-28 108
Msa0239570 AT5G24580.3 28.148 270 147 6 36 270 58 315 5.32e-27 107
Msa0239570 AT2G36950.1 38.571 210 118 3 36 235 52 260 6.59e-24 99.8
Msa0239570 AT5G03380.1 34.031 191 89 4 36 190 26 215 9.81e-23 96.7
Msa0239570 AT5G03380.2 33.862 189 88 4 38 190 1 188 1.06e-21 93.6
Msa0239570 AT5G24580.5 27.615 239 129 5 67 270 2 231 6.70e-20 86.3
Msa0239570 AT2G28090.1 37.778 180 107 2 20 199 15 189 9.30e-20 86.3
Msa0239570 AT1G29000.1 36.527 167 94 4 37 197 18 178 2.98e-18 82.8
Msa0239570 AT1G29000.2 36.527 167 94 4 37 197 18 178 2.98e-18 82.8

Find 62 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATCAGTGGAAACAAATT+TGG 0.146756 2_2:+14042249 Msa0239570:CDS
GAAGAAAGAAGAAGAGAAAA+AGG 0.160041 2_2:+14042390 Msa0239570:CDS
GAAGAAGGAAGAAGAGAAAA+AGG 0.176799 2_2:+14037570 Msa0239570:CDS
TCAACCTTGAGTACTATTTC+TGG 0.234887 2_2:-14037619 None:intergenic
GTAGTAGTATTACTGAATTT+TGG 0.272542 2_2:+14042826 Msa0239570:three_prime_UTR
ACCAAAGCCAGAGGAGAAAA+AGG 0.277970 2_2:+14039717 Msa0239570:CDS
AAACGTATCCGTAAGATTAA+AGG 0.281091 2_2:+14041487 Msa0239570:CDS
CTATGTCTATTCTGCATAAA+TGG 0.299318 2_2:+14037226 Msa0239570:five_prime_UTR
AACGATCAAGCAATAGTAAA+AGG 0.307303 2_2:+14042274 Msa0239570:CDS
AAAGAAAGAAGAAACCAAAA+AGG 0.312807 2_2:+14037546 Msa0239570:CDS
ACTTCATCAACAAGCTTTGT+TGG 0.318837 2_2:-14042307 None:intergenic
AAATCAAACGTAGTGAATAT+TGG 0.336929 2_2:+14042485 Msa0239570:CDS
CCATTGTTCTATCATAGAAA+TGG 0.370643 2_2:+14037376 Msa0239570:exon
AACAGATGAGTGCAAAATAT+TGG 0.371375 2_2:-14037328 None:intergenic
TACATAACAGAACAAGCATT+TGG 0.383409 2_2:-14042565 None:intergenic
AGTGTGAGATTAAATTAATA+TGG 0.391386 2_2:-14037272 None:intergenic
GAATCAGTGGAAACAAATTT+GGG 0.396665 2_2:+14042250 Msa0239570:CDS
CTTTAGTTGTTGTGTTTATG+AGG 0.399470 2_2:+14042738 Msa0239570:three_prime_UTR
CTATACTATGTTACATTACA+TGG 0.413204 2_2:-14042659 None:intergenic
TAAGTGATTCTGCCAACTTT+TGG 0.416806 2_2:-14042779 None:intergenic
GGAGGTGACCGCAGATAGTA+AGG 0.417983 2_2:+14039549 Msa0239570:CDS
TCTTTGTACCTTTAATCTTA+CGG 0.421997 2_2:-14041495 None:intergenic
TATATAGGTACATAAATTGT+AGG 0.436659 2_2:-14042849 None:intergenic
AAAGAAAAGTGGTAAGAAAG+TGG 0.444575 2_2:+14039633 Msa0239570:CDS
ACTATATGTACTAATAGTTA+TGG 0.450680 2_2:-14037304 None:intergenic
CAGTACACTCAACATTATAT+AGG 0.466485 2_2:-14042864 None:intergenic
GCAAGCTTCAATTGTGAAAG+AGG 0.470928 2_2:+14042348 Msa0239570:CDS
TTCTCATCACTGAAGATCTC+AGG 0.474996 2_2:-14042541 None:intergenic
CATTGTTCTATCATAGAAAT+GGG 0.487884 2_2:+14037377 Msa0239570:exon
ATGGCATTCTATGAAGTTGT+TGG 0.488989 2_2:+14042712 Msa0239570:three_prime_UTR
GAAAGTGAAGAAGAAAACAA+AGG 0.495745 2_2:+14042439 Msa0239570:CDS
TGTATTTCACTGCCAAAAGT+TGG 0.508147 2_2:+14042767 Msa0239570:three_prime_UTR
AAAGCATTGAAAGGATTTGA+AGG 0.510804 2_2:+14037676 Msa0239570:CDS
TGAAAGGAGAACAAGGAAGA+AGG 0.511133 2_2:+14037523 Msa0239570:intron
AAAGGCAGCAGACCCCATAA+AGG 0.514781 2_2:+14039594 Msa0239570:CDS
ACCTTTGCCAAAACCTCAAG+AGG 0.515408 2_2:+14039666 Msa0239570:CDS
AGAACTATTGTTACCACAGG+TGG 0.515740 2_2:-14041421 None:intergenic
AAAGTTGCAAAAGCATTGAA+AGG 0.535218 2_2:+14037667 Msa0239570:CDS
GTTGGCAGAATCACTTATGT+TGG 0.537522 2_2:+14042785 Msa0239570:three_prime_UTR
TTGAGAACTATTGTTACCAC+AGG 0.551604 2_2:-14041424 None:intergenic
AAAAGACTACAAAAGAAAAG+TGG 0.555223 2_2:+14039622 Msa0239570:CDS
ACCTCCAGAAATAGTACTCA+AGG 0.560038 2_2:+14037615 Msa0239570:CDS
TGGACATGCTGACTCAGCCA+TGG 0.567169 2_2:+14037197 Msa0239570:five_prime_UTR
TGTGAAAGAGGAAGAAAAGA+CGG 0.576354 2_2:+14042360 Msa0239570:CDS
TATGCAGAATAGACATAGGA+AGG 0.591875 2_2:-14037221 None:intergenic
TTGTTGATGAAGTGTTCAAG+AGG 0.595057 2_2:+14042317 Msa0239570:CDS
CATTTATGCAGAATAGACAT+AGG 0.601279 2_2:-14037225 None:intergenic
GTGTGTGAAAGGAGTGGAGG+AGG 0.602247 2_2:+14039531 Msa0239570:intron
GGCAGCAAAGTGGTAGTGAA+AGG 0.606418 2_2:+14039571 Msa0239570:CDS
ACTATTGTTACCACAGGTGG+AGG 0.612633 2_2:-14041418 None:intergenic
ACCTTGAGTACTATTTCTGG+AGG 0.614898 2_2:-14037616 None:intergenic
AGATAGTAAGGGCAGCAAAG+TGG 0.627174 2_2:+14039561 Msa0239570:CDS
TTTGCTGCCCTTACTATCTG+CGG 0.627410 2_2:-14039557 None:intergenic
CCATTTCTATGATAGAACAA+TGG 0.630383 2_2:-14037376 None:intergenic
TGCATTGTGAAGCTTGTGCA+AGG 0.638724 2_2:+14037644 Msa0239570:CDS
GAGGTGACCGCAGATAGTAA+GGG 0.644356 2_2:+14039550 Msa0239570:CDS
CAAAGTGGTAGTGAAAGGAA+AGG 0.648004 2_2:+14039576 Msa0239570:CDS
TAAAGAAGAACCAAAGCCAG+AGG 0.659557 2_2:+14039708 Msa0239570:CDS
GTTGTGTGTGAAAGGAGTGG+AGG 0.667974 2_2:+14039528 Msa0239570:intron
ATATGCAGGAGTTGAATCAG+TGG 0.682086 2_2:+14042237 Msa0239570:intron
AATAGACATAGGAAGGACCA+TGG 0.690363 2_2:-14037214 None:intergenic
ATTAATTTAATCTCACACTG+AGG 0.708827 2_2:+14037276 Msa0239570:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTTTAATAAT+TGG + chr2_2:14038405-14038424 Msa0239570:intron 0.0%
!! ATTAAAAAAAAATAAAAACC+GGG - chr2_2:14038402-14038421 None:intergenic 10.0%
!! AAATAAGAATAAGAAATAAA+AGG + chr2_2:14038758-14038777 Msa0239570:intron 10.0%
!!! CATTTTTCATAAAAAAATAA+AGG + chr2_2:14039255-14039274 Msa0239570:intron 10.0%
!! TTATAAATATATATACACTT+TGG - chr2_2:14039776-14039795 None:intergenic 10.0%
!! CACAAAAAAAATAAAAAATT+AGG + chr2_2:14041043-14041062 Msa0239570:intron 10.0%
!! CATTAATAATGAATAAATTA+AGG + chr2_2:14041067-14041086 Msa0239570:intron 10.0%
!! TTATAAAGATAAGAATTTAT+AGG - chr2_2:14042128-14042147 None:intergenic 10.0%
!!! TTTTTTTTTTTTTGTGTGAA+AGG + chr2_2:14037507-14037526 Msa0239570:intron 15.0%
!!! ATATGTACATTATTTTTTTG+AGG - chr2_2:14037997-14038016 None:intergenic 15.0%
!!! ATTTTACAACAAAATAATTG+AGG - chr2_2:14038432-14038451 None:intergenic 15.0%
!!! TATAAAATTCTAACTTTTAC+AGG + chr2_2:14039005-14039024 Msa0239570:intron 15.0%
!!! AAATTTTGAAATTGTTTGTA+TGG + chr2_2:14039950-14039969 Msa0239570:intron 15.0%
!!! TATATTTTATCTTTGACAAA+CGG - chr2_2:14040224-14040243 None:intergenic 15.0%
!!! CTAATAATAACTGATTTTTA+TGG + chr2_2:14040948-14040967 Msa0239570:intron 15.0%
!! AATCCAAAATATCAATTATT+TGG - chr2_2:14041364-14041383 None:intergenic 15.0%
!! ATCAAAGATAGATTATTTAA+TGG - chr2_2:14041990-14042009 None:intergenic 15.0%
!!! TTAAGAATTTTATCTTTGTA+TGG + chr2_2:14042693-14042712 Msa0239570:three_prime_UTR 15.0%
!! AGTGTGAGATTAAATTAATA+TGG - chr2_2:14037275-14037294 None:intergenic 20.0%
!! ACTATATGTACTAATAGTTA+TGG - chr2_2:14037307-14037326 None:intergenic 20.0%
!!! TTATACTTGAGAAATTTTGA+TGG - chr2_2:14037355-14037374 None:intergenic 20.0%
!!! TATAGTTGATATTTTCTACT+TGG + chr2_2:14037474-14037493 Msa0239570:intron 20.0%
!! GATTTATTAGATTATTGTCT+TGG - chr2_2:14037772-14037791 None:intergenic 20.0%
!! AAGTAATATGTACTACATTA+TGG - chr2_2:14037973-14037992 None:intergenic 20.0%
!! TAAGAATAAGAAATAAAAGG+TGG + chr2_2:14038761-14038780 Msa0239570:intron 20.0%
!! TCATAAAAAAATAAAGGTCT+AGG + chr2_2:14039261-14039280 Msa0239570:intron 20.0%
!! GTTTAAATAACATGCAATAT+CGG + chr2_2:14039858-14039877 Msa0239570:intron 20.0%
!!! TAAATTTTGCACACATTAAA+AGG - chr2_2:14040070-14040089 None:intergenic 20.0%
!! AAGTTGTCTAATTAATCTAA+TGG - chr2_2:14040177-14040196 None:intergenic 20.0%
!!! GAATATGAAATAGTTTTGAA+TGG + chr2_2:14040393-14040412 Msa0239570:intron 20.0%
!! AATCAGTTATTATTAGCTAA+GGG - chr2_2:14040944-14040963 None:intergenic 20.0%
!! AAATCAGTTATTATTAGCTA+AGG - chr2_2:14040945-14040964 None:intergenic 20.0%
!! GAATAAATTAAGGTGAAATT+AGG + chr2_2:14041077-14041096 Msa0239570:intron 20.0%
!!! TGACCAAATAATTGATATTT+TGG + chr2_2:14041358-14041377 Msa0239570:intron 20.0%
!!! TATTTTGGATTCTTATCATA+TGG + chr2_2:14041373-14041392 Msa0239570:intron 20.0%
!! CATATGATTATGATCTATAT+TGG - chr2_2:14041700-14041719 None:intergenic 20.0%
!! GATTGAAAATAAATTAGTCA+TGG - chr2_2:14041775-14041794 None:intergenic 20.0%
!!! CTAATTTATTTTCAATCAGA+AGG + chr2_2:14041778-14041797 Msa0239570:intron 20.0%
!! AGATTATTTAATGGTTGATT+TGG - chr2_2:14041981-14042000 None:intergenic 20.0%
!! AATCAAATTATTGAGTTTAG+TGG - chr2_2:14042173-14042192 None:intergenic 20.0%
!!! TTTGTATTTTAGTAGCTTAT+TGG + chr2_2:14042617-14042636 Msa0239570:three_prime_UTR 20.0%
!! TATATAGGTACATAAATTGT+AGG - chr2_2:14042852-14042871 None:intergenic 20.0%
!!! ATGGAGATTTTGAAAATATG+AGG - chr2_2:14037256-14037275 None:intergenic 25.0%
! ATTAATTTAATCTCACACTG+AGG + chr2_2:14037276-14037295 Msa0239570:five_prime_UTR 25.0%
! CATTGTTCTATCATAGAAAT+GGG + chr2_2:14037377-14037396 Msa0239570:exon 25.0%
! AAAGAAAGAAGAAACCAAAA+AGG + chr2_2:14037546-14037565 Msa0239570:CDS 25.0%
! AATATGTACTACATTATGGT+TGG - chr2_2:14037969-14037988 None:intergenic 25.0%
!!! AAGAAGATTTCTGAAATGAT+GGG + chr2_2:14038351-14038370 Msa0239570:intron 25.0%
! TTTCTCTATAAATAGACACT+TGG + chr2_2:14038496-14038515 Msa0239570:intron 25.0%
! AATAAGAAATAAAAGGTGGT+GGG + chr2_2:14038765-14038784 Msa0239570:intron 25.0%
! TGTTGAATGAAAAAAACCAT+TGG + chr2_2:14038794-14038813 Msa0239570:intron 25.0%
!! AGGTAAATTTTATACACGAT+AGG + chr2_2:14039025-14039044 Msa0239570:intron 25.0%
! TAAAAAAATAAAGGTCTAGG+TGG + chr2_2:14039264-14039283 Msa0239570:intron 25.0%
! AAAAAAATAAAGGTCTAGGT+GGG + chr2_2:14039265-14039284 Msa0239570:intron 25.0%
! GTATGAGTGATATTAAATCT+GGG - chr2_2:14039370-14039389 None:intergenic 25.0%
! TGTATGAGTGATATTAAATC+TGG - chr2_2:14039371-14039390 None:intergenic 25.0%
! AAAAGACTACAAAAGAAAAG+TGG + chr2_2:14039622-14039641 Msa0239570:CDS 25.0%
! TGCATTTCATACATGTTATT+TGG - chr2_2:14040359-14040378 None:intergenic 25.0%
! ATAGAAACAAGTTACCAAAA+GGG - chr2_2:14040447-14040466 None:intergenic 25.0%
!! CTCAATTTTATTACACTACA+GGG - chr2_2:14040724-14040743 None:intergenic 25.0%
!! TCTCAATTTTATTACACTAC+AGG - chr2_2:14040725-14040744 None:intergenic 25.0%
! TGTAGTGTAATAAAATTGAG+AGG + chr2_2:14040724-14040743 Msa0239570:intron 25.0%
! ATCAGTTATTATTAGCTAAG+GGG - chr2_2:14040943-14040962 None:intergenic 25.0%
! AATGTGACAAACCATTTAAT+GGG - chr2_2:14041020-14041039 None:intergenic 25.0%
! AAATGTGACAAACCATTTAA+TGG - chr2_2:14041021-14041040 None:intergenic 25.0%
!! TGGTATCGTAATTTTACTAA+AGG - chr2_2:14041231-14041250 None:intergenic 25.0%
! TCTTTGTACCTTTAATCTTA+CGG - chr2_2:14041498-14041517 None:intergenic 25.0%
!!! CTTGCACACTTTTTTTTTTT+TGG + chr2_2:14041637-14041656 Msa0239570:intron 25.0%
! TATGATCTATATTGGTCAAA+AGG - chr2_2:14041692-14041711 None:intergenic 25.0%
! TTACAGTATCATAGAGAAAA+TGG + chr2_2:14041747-14041766 Msa0239570:intron 25.0%
!!! AATCTATCTTTGATTTGCAT+CGG + chr2_2:14041996-14042015 Msa0239570:intron 25.0%
!! GTGTTACTAATATTATATGC+AGG + chr2_2:14042223-14042242 Msa0239570:intron 25.0%
! AAATCAAACGTAGTGAATAT+TGG + chr2_2:14042485-14042504 Msa0239570:CDS 25.0%
! CTATACTATGTTACATTACA+TGG - chr2_2:14042662-14042681 None:intergenic 25.0%
!! GTAGTAGTATTACTGAATTT+TGG + chr2_2:14042826-14042845 Msa0239570:three_prime_UTR 25.0%
CATTTATGCAGAATAGACAT+AGG - chr2_2:14037228-14037247 None:intergenic 30.0%
CTATGTCTATTCTGCATAAA+TGG + chr2_2:14037226-14037245 Msa0239570:five_prime_UTR 30.0%
!! GAGATTTTGAAAATATGAGG+TGG - chr2_2:14037253-14037272 None:intergenic 30.0%
AACAGATGAGTGCAAAATAT+TGG - chr2_2:14037331-14037350 None:intergenic 30.0%
CCATTTCTATGATAGAACAA+TGG - chr2_2:14037379-14037398 None:intergenic 30.0%
CCATTGTTCTATCATAGAAA+TGG + chr2_2:14037376-14037395 Msa0239570:exon 30.0%
!! AAAGTTGCAAAAGCATTGAA+AGG + chr2_2:14037667-14037686 Msa0239570:CDS 30.0%
!! AAAGCATTGAAAGGATTTGA+AGG + chr2_2:14037676-14037695 Msa0239570:CDS 30.0%
TGACAATGGATCATACAAAT+TGG - chr2_2:14038025-14038044 None:intergenic 30.0%
CATAGTCTAACAAGGAAAAA+AGG - chr2_2:14038079-14038098 None:intergenic 30.0%
!! GAAGAAGATTTCTGAAATGA+TGG + chr2_2:14038350-14038369 Msa0239570:intron 30.0%
GAAGAAGATAGTGAAAAACT+TGG - chr2_2:14038551-14038570 None:intergenic 30.0%
GAATAAGAAATAAAAGGTGG+TGG + chr2_2:14038764-14038783 Msa0239570:intron 30.0%
ATAAGAAATAAAAGGTGGTG+GGG + chr2_2:14038766-14038785 Msa0239570:intron 30.0%
AATGAAAAAAACCATTGGAG+AGG + chr2_2:14038799-14038818 Msa0239570:intron 30.0%
! ATGTTGGTTACCATTGTAAA+TGG + chr2_2:14038907-14038926 Msa0239570:intron 30.0%
GTGAAATTCAAAAGCAATCA+TGG - chr2_2:14038953-14038972 None:intergenic 30.0%
! TTTTGTTAACGAGTGTCTTA+AGG + chr2_2:14039092-14039111 Msa0239570:intron 30.0%
AAAAAATAAAGGTCTAGGTG+GGG + chr2_2:14039266-14039285 Msa0239570:intron 30.0%
! TATGTCACCAAAGTATTATC+CGG + chr2_2:14039452-14039471 Msa0239570:intron 30.0%
TTGAAAATGTTGTGTGTGAA+AGG + chr2_2:14039520-14039539 Msa0239570:intron 30.0%
AAAGAAAAGTGGTAAGAAAG+TGG + chr2_2:14039633-14039652 Msa0239570:CDS 30.0%
CACAAGTAGTTATGATAAGA+AGG - chr2_2:14039816-14039835 None:intergenic 30.0%
TTGTATAACTTTGTGAGTGT+AGG + chr2_2:14040274-14040293 Msa0239570:intron 30.0%
CATAGAAACAAGTTACCAAA+AGG - chr2_2:14040448-14040467 None:intergenic 30.0%
!!! CTTTTGGTAACTTGTTTCTA+TGG + chr2_2:14040446-14040465 Msa0239570:intron 30.0%
! AATTTTATTACACTACAGGG+TGG - chr2_2:14040721-14040740 None:intergenic 30.0%
TATATGTAATGTGTGTGACA+TGG + chr2_2:14040778-14040797 Msa0239570:intron 30.0%
AAGAAAAACATTATGTGACG+TGG + chr2_2:14040838-14040857 Msa0239570:intron 30.0%
AGAAAAACATTATGTGACGT+GGG + chr2_2:14040839-14040858 Msa0239570:intron 30.0%
GTGGGTAAAAGTAAAATATG+TGG + chr2_2:14040857-14040876 Msa0239570:intron 30.0%
TTGTGCTGTCGATAATTTAT+TGG + chr2_2:14040882-14040901 Msa0239570:intron 30.0%
GTCGATAATTTATTGGATGA+TGG + chr2_2:14040889-14040908 Msa0239570:intron 30.0%
! CTGATTTTTATGGTCCATTT+TGG + chr2_2:14040958-14040977 Msa0239570:intron 30.0%
!! TTTAGTTTGGACCCATTAAA+TGG + chr2_2:14041006-14041025 Msa0239570:intron 30.0%
GTTATGTAGACATGTTATGT+AGG - chr2_2:14041124-14041143 None:intergenic 30.0%
TAACTCCTTAATTGCATGTT+TGG + chr2_2:14041140-14041159 Msa0239570:intron 30.0%
TCAATCCAAACATGCAATTA+AGG - chr2_2:14041148-14041167 None:intergenic 30.0%
TAAATACTCCAATAGACACA+TGG + chr2_2:14041282-14041301 Msa0239570:intron 30.0%
CTATTAAACCATGTGTCTAT+TGG - chr2_2:14041293-14041312 None:intergenic 30.0%
AAACGTATCCGTAAGATTAA+AGG + chr2_2:14041487-14041506 Msa0239570:CDS 30.0%
AATACCAACAAGATTGAAAG+AGG - chr2_2:14041527-14041546 None:intergenic 30.0%
TCTCTATGATACTGTAATTG+AGG - chr2_2:14041744-14041763 None:intergenic 30.0%
TGAATCAGTGGAAACAAATT+TGG + chr2_2:14042249-14042268 Msa0239570:CDS 30.0%
GAATCAGTGGAAACAAATTT+GGG + chr2_2:14042250-14042269 Msa0239570:CDS 30.0%
AACGATCAAGCAATAGTAAA+AGG + chr2_2:14042274-14042293 Msa0239570:CDS 30.0%
GAAGAAAGAAGAAGAGAAAA+AGG + chr2_2:14042390-14042409 Msa0239570:CDS 30.0%
GAAAGTGAAGAAGAAAACAA+AGG + chr2_2:14042439-14042458 Msa0239570:CDS 30.0%
! TAGTCAACATAGTCTTTTGA+TGG - chr2_2:14042511-14042530 None:intergenic 30.0%
TACATAACAGAACAAGCATT+TGG - chr2_2:14042568-14042587 None:intergenic 30.0%
CTTTAGTTGTTGTGTTTATG+AGG + chr2_2:14042738-14042757 Msa0239570:three_prime_UTR 30.0%
CAGTACACTCAACATTATAT+AGG - chr2_2:14042867-14042886 None:intergenic 30.0%
TATGCAGAATAGACATAGGA+AGG - chr2_2:14037224-14037243 None:intergenic 35.0%
! TTTTGTGTGAAAGGAGAACA+AGG + chr2_2:14037516-14037535 Msa0239570:intron 35.0%
AGAAACCAAAAAGGAGAAGA+AGG + chr2_2:14037555-14037574 Msa0239570:CDS 35.0%
! TTCTTCCTTCTTCTCCTTTT+TGG - chr2_2:14037563-14037582 None:intergenic 35.0%
GAAGAAGGAAGAAGAGAAAA+AGG + chr2_2:14037570-14037589 Msa0239570:CDS 35.0%
TCAACCTTGAGTACTATTTC+TGG - chr2_2:14037622-14037641 None:intergenic 35.0%
!! ACAAAAGTACTAGCTGACAA+TGG - chr2_2:14038039-14038058 None:intergenic 35.0%
GTCTAACAAGGAAAAAAGGA+GGG - chr2_2:14038075-14038094 None:intergenic 35.0%
AGTCTAACAAGGAAAAAAGG+AGG - chr2_2:14038076-14038095 None:intergenic 35.0%
CTTGTTAGACTATGTGCAAT+GGG + chr2_2:14038085-14038104 Msa0239570:intron 35.0%
! TTTTTGCATGCCATGTGAAA+TGG - chr2_2:14038284-14038303 None:intergenic 35.0%
GACACTTGGTTCATTTCATT+TGG + chr2_2:14038510-14038529 Msa0239570:intron 35.0%
TTCAACTTTAACCTCTCCAA+TGG - chr2_2:14038813-14038832 None:intergenic 35.0%
TTAAGAGAGAGAAGATGATG+TGG + chr2_2:14038844-14038863 Msa0239570:intron 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG + chr2_2:14038867-14038886 Msa0239570:intron 35.0%
GTGTTGGGAATTGAAAAAGT+GGG + chr2_2:14038868-14038887 Msa0239570:intron 35.0%
!! ATTGAAAAAGTGGGTGTTGA+AGG + chr2_2:14038877-14038896 Msa0239570:intron 35.0%
!! TTGAAAAAGTGGGTGTTGAA+GGG + chr2_2:14038878-14038897 Msa0239570:intron 35.0%
!! TGTTGAAGGGTGTTTAATGT+TGG + chr2_2:14038891-14038910 Msa0239570:intron 35.0%
TACCATTGTAAATGGTCTAG+AGG + chr2_2:14038915-14038934 Msa0239570:intron 35.0%
ACCATTGTAAATGGTCTAGA+GGG + chr2_2:14038916-14038935 Msa0239570:intron 35.0%
TATCACTCATACAACACATC+TGG + chr2_2:14039378-14039397 Msa0239570:intron 35.0%
ATCACTCATACAACACATCT+GGG + chr2_2:14039379-14039398 Msa0239570:intron 35.0%
! CTCTTTTCCGGATAATACTT+TGG - chr2_2:14039462-14039481 None:intergenic 35.0%
GTATTATCCGGAAAAGAGTA+TGG + chr2_2:14039464-14039483 Msa0239570:intron 35.0%
! GTTTTCACCATACTCTTTTC+CGG - chr2_2:14039474-14039493 None:intergenic 35.0%
! AGTCTTTTGAGCACCTTTAT+GGG - chr2_2:14039610-14039629 None:intergenic 35.0%
! TAGTCTTTTGAGCACCTTTA+TGG - chr2_2:14039611-14039630 None:intergenic 35.0%
! TTTTTCTCCTCTTGAGGTTT+TGG - chr2_2:14039676-14039695 None:intergenic 35.0%
!!! TCTTCTTTTTTCTCCTCTTG+AGG - chr2_2:14039682-14039701 None:intergenic 35.0%
ACTTAAAGAGTGAAACGATG+TGG - chr2_2:14039930-14039949 None:intergenic 35.0%
TTGAAATTGTTTGTATGGCG+TGG + chr2_2:14039955-14039974 Msa0239570:intron 35.0%
TTGTATGGCGTGGTAAAATA+AGG + chr2_2:14039965-14039984 Msa0239570:intron 35.0%
TGTATGGCGTGGTAAAATAA+GGG + chr2_2:14039966-14039985 Msa0239570:intron 35.0%
! ACAAACGGATTCAAAACACA+GGG - chr2_2:14040209-14040228 None:intergenic 35.0%
GTCGTCCAATTAAGATCAAA+CGG + chr2_2:14040245-14040264 Msa0239570:intron 35.0%
CACAACCGTTTGATCTTAAT+TGG - chr2_2:14040253-14040272 None:intergenic 35.0%
ACGAATCAAGTTCCAATGAA+TGG + chr2_2:14040312-14040331 Msa0239570:intron 35.0%
CGAATCAAGTTCCAATGAAT+GGG + chr2_2:14040313-14040332 Msa0239570:intron 35.0%
GAATCAAGTTCCAATGAATG+GGG + chr2_2:14040314-14040333 Msa0239570:intron 35.0%
AATCAAGTTCCAATGAATGG+GGG + chr2_2:14040315-14040334 Msa0239570:intron 35.0%
!! GGTAACTTGTTTCTATGGAT+TGG + chr2_2:14040451-14040470 Msa0239570:intron 35.0%
!! ACTTGTTTCTATGGATTGGA+TGG + chr2_2:14040455-14040474 Msa0239570:intron 35.0%
CAATAATGTCCCTACCATAA+AGG + chr2_2:14040540-14040559 Msa0239570:intron 35.0%
TTACATGTGCCTTTATGGTA+GGG - chr2_2:14040552-14040571 None:intergenic 35.0%
AAGACTGTGACAATTAAGAG+AGG + chr2_2:14040580-14040599 Msa0239570:intron 35.0%
AAGTTGCACAAAAGGATAGT+GGG - chr2_2:14040613-14040632 None:intergenic 35.0%
ATTATTAGCTAAGGGGATAG+AGG - chr2_2:14040936-14040955 None:intergenic 35.0%
CATGGCTCATATCTTTAGTT+TGG + chr2_2:14040993-14041012 Msa0239570:intron 35.0%
AGCTATTGTTAAAGTCACAG+TGG - chr2_2:14041198-14041217 None:intergenic 35.0%
! TGGAGTATTTAGTGTACGTT+TGG - chr2_2:14041273-14041292 None:intergenic 35.0%
TTGAGAACTATTGTTACCAC+AGG - chr2_2:14041427-14041446 None:intergenic 35.0%
CAACAAGATTGAAAGAGGAA+AGG - chr2_2:14041522-14041541 None:intergenic 35.0%
CTTTCCTCTTTCAATCTTGT+TGG + chr2_2:14041520-14041539 Msa0239570:intron 35.0%
GTTAACGTGCTTCATCTAAA+AGG - chr2_2:14041851-14041870 None:intergenic 35.0%
AATCTTGACCATGAGAACAT+CGG + chr2_2:14041934-14041953 Msa0239570:intron 35.0%
!! TATCTTTGATTTGCATCGGA+CGG + chr2_2:14042000-14042019 Msa0239570:intron 35.0%
! ACTTCATCAACAAGCTTTGT+TGG - chr2_2:14042310-14042329 None:intergenic 35.0%
! TTGTTGATGAAGTGTTCAAG+AGG + chr2_2:14042317-14042336 Msa0239570:CDS 35.0%
TGTGAAAGAGGAAGAAAAGA+CGG + chr2_2:14042360-14042379 Msa0239570:CDS 35.0%
AGAAGAAGAGAAAAAGGAAG+AGG + chr2_2:14042396-14042415 Msa0239570:CDS 35.0%
ATGGCATTCTATGAAGTTGT+TGG + chr2_2:14042712-14042731 Msa0239570:three_prime_UTR 35.0%
TGTATTTCACTGCCAAAAGT+TGG + chr2_2:14042767-14042786 Msa0239570:three_prime_UTR 35.0%
! TAAGTGATTCTGCCAACTTT+TGG - chr2_2:14042782-14042801 None:intergenic 35.0%
AATAGACATAGGAAGGACCA+TGG - chr2_2:14037217-14037236 None:intergenic 40.0%
TGAAAGGAGAACAAGGAAGA+AGG + chr2_2:14037523-14037542 Msa0239570:intron 40.0%
GAAGGAAGAAGAGAAAAAGG+AGG + chr2_2:14037573-14037592 Msa0239570:CDS 40.0%
ACCTCCAGAAATAGTACTCA+AGG + chr2_2:14037615-14037634 Msa0239570:CDS 40.0%
!! ACCTTGAGTACTATTTCTGG+AGG - chr2_2:14037619-14037638 None:intergenic 40.0%
CCATTGCACATAGTCTAACA+AGG - chr2_2:14038087-14038106 None:intergenic 40.0%
CCTTGTTAGACTATGTGCAA+TGG + chr2_2:14038084-14038103 Msa0239570:intron 40.0%
TGTTTAACCTGACAGTCAAC+AGG + chr2_2:14038110-14038129 Msa0239570:intron 40.0%
GTTTAACCTGACAGTCAACA+GGG + chr2_2:14038111-14038130 Msa0239570:intron 40.0%
AACTGTGTTGAATGAACTGC+TGG + chr2_2:14038158-14038177 Msa0239570:intron 40.0%
GCATTCTGTGGCAGATTAAT+TGG - chr2_2:14038212-14038231 None:intergenic 40.0%
CTTCTTCTCTCCATGTGAAA+TGG - chr2_2:14038337-14038356 None:intergenic 40.0%
!! GACACGTGTTGGTTGTTTAT+AGG + chr2_2:14038373-14038392 Msa0239570:intron 40.0%
TTGGTTGTTTATAGGTTGCC+CGG + chr2_2:14038381-14038400 Msa0239570:intron 40.0%
! AGAAGATGATGTGGAGTGTT+GGG + chr2_2:14038853-14038872 Msa0239570:intron 40.0%
TCCCTCTAGACCATTTACAA+TGG - chr2_2:14038920-14038939 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG + chr2_2:14039318-14039337 Msa0239570:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr2_2:14039319-14039338 Msa0239570:intron 40.0%
ATTAAATCTGGGCCACACAA+AGG - chr2_2:14039330-14039349 None:intergenic 40.0%
ACACAAAGAGTTGTGTTGTG+TGG - chr2_2:14039405-14039424 None:intergenic 40.0%
ACACAACACAACTCTTTGTG+TGG + chr2_2:14039404-14039423 Msa0239570:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr2_2:14039319-14039338 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr2_2:14039318-14039337 None:intergenic 40.0%
AATGTTGTGTGTGAAAGGAG+TGG + chr2_2:14039525-14039544 Msa0239570:intron 40.0%
! CAAAGTGGTAGTGAAAGGAA+AGG + chr2_2:14039576-14039595 Msa0239570:CDS 40.0%
! GTCTTTTGAGCACCTTTATG+GGG - chr2_2:14039609-14039628 None:intergenic 40.0%
TAAAGAAGAACCAAAGCCAG+AGG + chr2_2:14039708-14039727 Msa0239570:CDS 40.0%
! GACAAACGGATTCAAAACAC+AGG - chr2_2:14040210-14040229 None:intergenic 40.0%
TTGTACAATCCCCCATTCAT+TGG - chr2_2:14040327-14040346 None:intergenic 40.0%
AGGGTAACGTTAGTGCAAAT+TGG - chr2_2:14040428-14040447 None:intergenic 40.0%
! TTGCACTAACGTTACCCTTT+TGG + chr2_2:14040430-14040449 Msa0239570:intron 40.0%
GTTACATGTGCCTTTATGGT+AGG - chr2_2:14040553-14040572 None:intergenic 40.0%
! CATAAAGGCACATGTAACGA+GGG + chr2_2:14040555-14040574 Msa0239570:intron 40.0%
AGTTGCACAAAAGGATAGTG+GGG - chr2_2:14040612-14040631 None:intergenic 40.0%
CAAGTTGCACAAAAGGATAG+TGG - chr2_2:14040614-14040633 None:intergenic 40.0%
! TGCATGTCAAGTTGCACAAA+AGG - chr2_2:14040621-14040640 None:intergenic 40.0%
AAAGATATGAGCCATGCATG+TGG - chr2_2:14040989-14041008 None:intergenic 40.0%
GATAAGCGATAGACTCACTT+TGG - chr2_2:14041251-14041270 None:intergenic 40.0%
AGAACTATTGTTACCACAGG+TGG - chr2_2:14041424-14041443 None:intergenic 40.0%
ACGTGCTTCATCTAAAAGGA+TGG - chr2_2:14041847-14041866 None:intergenic 40.0%
ATTGTGTACAACTACGTACG+TGG - chr2_2:14041910-14041929 None:intergenic 40.0%
TAAGTTGTCCGATGTTCTCA+TGG - chr2_2:14041945-14041964 None:intergenic 40.0%
TTAATGAGCTTAATGCGCCA+CGG - chr2_2:14042039-14042058 None:intergenic 40.0%
ACCACTTCTAACTTCATGCA+TGG + chr2_2:14042058-14042077 Msa0239570:intron 40.0%
ACCATGCATGAAGTTAGAAG+TGG - chr2_2:14042062-14042081 None:intergenic 40.0%
ATATGCAGGAGTTGAATCAG+TGG + chr2_2:14042237-14042256 Msa0239570:intron 40.0%
GCAAGCTTCAATTGTGAAAG+AGG + chr2_2:14042348-14042367 Msa0239570:CDS 40.0%
TTCTCATCACTGAAGATCTC+AGG - chr2_2:14042544-14042563 None:intergenic 40.0%
GTTGGCAGAATCACTTATGT+TGG + chr2_2:14042785-14042804 Msa0239570:three_prime_UTR 40.0%
TGCATTGTGAAGCTTGTGCA+AGG + chr2_2:14037644-14037663 Msa0239570:CDS 45.0%
AACAGGGAAAACCACTGCAA+TGG + chr2_2:14038127-14038146 Msa0239570:intron 45.0%
GTTTCAACATGCCATTGCAG+TGG - chr2_2:14038141-14038160 None:intergenic 45.0%
TGGACGAGAGAGAGGATTAA+CGG + chr2_2:14038178-14038197 Msa0239570:intron 45.0%
AGAATGCTCGCCATTTCACA+TGG + chr2_2:14038271-14038290 Msa0239570:intron 45.0%
GTGAAATGGCGAGCACTATT+TGG - chr2_2:14038323-14038342 None:intergenic 45.0%
ATAGTGCTCGCCATTTCACA+TGG + chr2_2:14038324-14038343 Msa0239570:intron 45.0%
! TGAAATGATGGGACACGTGT+TGG + chr2_2:14038362-14038381 Msa0239570:intron 45.0%
GAGAAGATGATGTGGAGTGT+TGG + chr2_2:14038852-14038871 Msa0239570:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr2_2:14039423-14039442 None:intergenic 45.0%
! ACACAAAGGTGTGTGTTGTG+TGG - chr2_2:14039345-14039364 None:intergenic 45.0%
ACACAACACACACCTTTGTG+TGG + chr2_2:14039344-14039363 Msa0239570:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr2_2:14039423-14039442 Msa0239570:intron 45.0%
TTTGCTGCCCTTACTATCTG+CGG - chr2_2:14039560-14039579 None:intergenic 45.0%
AGATAGTAAGGGCAGCAAAG+TGG + chr2_2:14039561-14039580 Msa0239570:CDS 45.0%
ACCTTTGCCAAAACCTCAAG+AGG + chr2_2:14039666-14039685 Msa0239570:CDS 45.0%
!! TCCTCTTGAGGTTTTGGCAA+AGG - chr2_2:14039670-14039689 None:intergenic 45.0%
ACCAAAGCCAGAGGAGAAAA+AGG + chr2_2:14039717-14039736 Msa0239570:CDS 45.0%
!! TCCTTTTTCTCCTCTGGCTT+TGG - chr2_2:14039721-14039740 None:intergenic 45.0%
! ACCTCATCCTTTTTCTCCTC+TGG - chr2_2:14039727-14039746 None:intergenic 45.0%
CCTCGTTACATGTGCCTTTA+TGG - chr2_2:14040557-14040576 None:intergenic 45.0%
! CCATAAAGGCACATGTAACG+AGG + chr2_2:14040554-14040573 Msa0239570:intron 45.0%
ACATGCAGCTTGCAGCAAAA+TGG + chr2_2:14040634-14040653 Msa0239570:intron 45.0%
CATGCAGCTTGCAGCAAAAT+GGG + chr2_2:14040635-14040654 Msa0239570:intron 45.0%
ATGCAGCTTGCAGCAAAATG+GGG + chr2_2:14040636-14040655 Msa0239570:intron 45.0%
ATGGTGAGATCAGCAAGGTA+AGG + chr2_2:14040908-14040927 Msa0239570:intron 45.0%
TGCATGTGGCGTTTCCAAAA+TGG - chr2_2:14040975-14040994 None:intergenic 45.0%
!! TTTTGGAAACGCCACATGCA+TGG + chr2_2:14040975-14040994 Msa0239570:intron 45.0%
CGATGAGTTCACCTGAAACA+CGG + chr2_2:14041168-14041187 Msa0239570:intron 45.0%
ACTATTGTTACCACAGGTGG+AGG - chr2_2:14041421-14041440 None:intergenic 45.0%
TACTGTCTCCTTACCACTTG+CGG + chr2_2:14041565-14041584 Msa0239570:intron 45.0%
CGTGGTTACAGTAGTGAATC+TGG - chr2_2:14041892-14041911 None:intergenic 45.0%
!!! TTAAAACTTTAATAAAATTT+TGG - chr2_2:14037879-14037898 None:intergenic 5.0%
!! TATTAAAAAAAAATAAAAAC+CGG - chr2_2:14038403-14038422 None:intergenic 5.0%
!!! TCATAAAATTTTAATATTTA+AGG + chr2_2:14039200-14039219 Msa0239570:intron 5.0%
!! GGTTTTCCCTGTTGACTGTC+AGG - chr2_2:14038120-14038139 None:intergenic 50.0%
CATTCTGTGGCAATCCTGTG+CGG - chr2_2:14038257-14038276 None:intergenic 50.0%
GTGAAATGGCGAGCATTCTG+TGG - chr2_2:14038270-14038289 None:intergenic 50.0%
AAGGTCTAGGTGGGGAAAAG+AGG + chr2_2:14039274-14039293 Msa0239570:intron 50.0%
GGAAAAGAGGAGTGGCACTT+TGG + chr2_2:14039287-14039306 Msa0239570:intron 50.0%
GTTGTGTGTGAAAGGAGTGG+AGG + chr2_2:14039528-14039547 Msa0239570:intron 50.0%
GAGGTGACCGCAGATAGTAA+GGG + chr2_2:14039550-14039569 Msa0239570:CDS 50.0%
! GGCAGCAAAGTGGTAGTGAA+AGG + chr2_2:14039571-14039590 Msa0239570:CDS 50.0%
AAAGGCAGCAGACCCCATAA+AGG + chr2_2:14039594-14039613 Msa0239570:CDS 50.0%
GCCAGAGGAGAAAAAGGATG+AGG + chr2_2:14039723-14039742 Msa0239570:CDS 50.0%
GCAAAATGGGGTCACACTCA+CGG + chr2_2:14040648-14040667 Msa0239570:intron 50.0%
! GGATGATGGTGAGATCAGCA+AGG + chr2_2:14040903-14040922 Msa0239570:intron 50.0%
! ATTTTTGCAGCCTCCACCTG+TGG + chr2_2:14041408-14041427 Msa0239570:intron 50.0%
! TTTGTTGTGTGCACCGCAAG+TGG - chr2_2:14041581-14041600 None:intergenic 50.0%
! ACGGTTGAGATTGATAGCCG+TGG + chr2_2:14042019-14042038 Msa0239570:intron 50.0%
!! TGGACATGCTGACTCAGCCA+TGG + chr2_2:14037197-14037216 Msa0239570:five_prime_UTR 55.0%
TGAACTGCTGGACGAGAGAG+AGG + chr2_2:14038170-14038189 Msa0239570:intron 55.0%
ATCTGCCACAGAATGCCACG+TGG + chr2_2:14038216-14038235 Msa0239570:intron 55.0%
CTAGGTGGGGAAAAGAGGAG+TGG + chr2_2:14039279-14039298 Msa0239570:intron 55.0%
GTGTGTGAAAGGAGTGGAGG+AGG + chr2_2:14039531-14039550 Msa0239570:intron 55.0%
GGAGGTGACCGCAGATAGTA+AGG + chr2_2:14039549-14039568 Msa0239570:CDS 55.0%
ACAGTGGTTCGCCGTGTTTC+AGG - chr2_2:14041182-14041201 None:intergenic 55.0%
TGTGTGCACCGCAAGTGGTA+AGG - chr2_2:14041576-14041595 None:intergenic 55.0%
!! CTGGATTTGCTAGACGCGAG+TGG - chr2_2:14041873-14041892 None:intergenic 55.0%
TGCCACAGAATGCCACGTGG+CGG + chr2_2:14038219-14038238 Msa0239570:intron 60.0%
TCCAATTGCACGCCGCCACG+TGG - chr2_2:14038234-14038253 None:intergenic 65.0%
GGCGTGCAATTGGACCGCAC+AGG + chr2_2:14038240-14038259 Msa0239570:intron 65.0%
CGCCGCCACGTGGCATTCTG+TGG - chr2_2:14038224-14038243 None:intergenic 70.0%
GCCACGTGGCGGCGTGCAAT+TGG + chr2_2:14038230-14038249 Msa0239570:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 14037193 14042939 14037193 ID=Msa0239570;Name=Msa0239570
chr2_2 mRNA 14037193 14042939 14037193 ID=Msa0239570-mRNA-1;Parent=Msa0239570;Name=Msa0239570-mRNA-1;_AED=0.03;_eAED=0.03;_QI=202|1|1|1|1|1|5|351|271
chr2_2 exon 14037193 14037403 14037193 ID=Msa0239570-mRNA-1:exon:5827;Parent=Msa0239570-mRNA-1
chr2_2 exon 14037529 14037697 14037529 ID=Msa0239570-mRNA-1:exon:5828;Parent=Msa0239570-mRNA-1
chr2_2 exon 14039542 14039744 14039542 ID=Msa0239570-mRNA-1:exon:5829;Parent=Msa0239570-mRNA-1
chr2_2 exon 14041418 14041508 14041418 ID=Msa0239570-mRNA-1:exon:5830;Parent=Msa0239570-mRNA-1
chr2_2 exon 14042245 14042939 14042245 ID=Msa0239570-mRNA-1:exon:5831;Parent=Msa0239570-mRNA-1
chr2_2 five_prime_UTR 14037193 14037394 14037193 ID=Msa0239570-mRNA-1:five_prime_utr;Parent=Msa0239570-mRNA-1
chr2_2 CDS 14037395 14037403 14037395 ID=Msa0239570-mRNA-1:cds;Parent=Msa0239570-mRNA-1
chr2_2 CDS 14037529 14037697 14037529 ID=Msa0239570-mRNA-1:cds;Parent=Msa0239570-mRNA-1
chr2_2 CDS 14039542 14039744 14039542 ID=Msa0239570-mRNA-1:cds;Parent=Msa0239570-mRNA-1
chr2_2 CDS 14041418 14041508 14041418 ID=Msa0239570-mRNA-1:cds;Parent=Msa0239570-mRNA-1
chr2_2 CDS 14042245 14042588 14042245 ID=Msa0239570-mRNA-1:cds;Parent=Msa0239570-mRNA-1
chr2_2 three_prime_UTR 14042589 14042939 14042589 ID=Msa0239570-mRNA-1:three_prime_utr;Parent=Msa0239570-mRNA-1
Gene Sequence

>Msa0239570

ATGGGTGAAGAGAACAAGGAAGAAGGAAAGAAAGAAGAAACCAAAAAGGAGAAGAAGGAAGAAGAGAAAAAGGAGGAAAAGAAAGATGAAGAACAACCTCCAGAAATAGTACTCAAGGTTGATATGCATTGTGAAGCTTGTGCAAGGAAAGTTGCAAAAGCATTGAAAGGATTTGAAGGAGTGGAGGAGGTGACCGCAGATAGTAAGGGCAGCAAAGTGGTAGTGAAAGGAAAGGCAGCAGACCCCATAAAGGTGCTCAAAAGACTACAAAAGAAAAGTGGTAAGAAAGTGGAGTTAATTTCACCTTTGCCAAAACCTCAAGAGGAGAAAAAAGAAGAAGAAATTAAAGAAGAACCAAAGCCAGAGGAGAAAAAGGATGAGCCTCCACCTGTGGTAACAATAGTTCTCAAAATTAGAATGCATTGTGATGCATGTGCTCAAGTTATACAGAAACGTATCCGTAAGATTAAAGGAGTTGAATCAGTGGAAACAAATTTGGGAAACGATCAAGCAATAGTAAAAGGAGTGATTGATCCAACAAAGCTTGTTGATGAAGTGTTCAAGAGGACAAAAAAGCAAGCTTCAATTGTGAAAGAGGAAGAAAAGACGGAAGAAGAGAAGAAAGAAGAAGAGAAAAAGGAAGAGGTCAAAGAAGAAGAGAAAAAAGAAAGTGAAGAAGAAAACAAAGGAGAAGAAGATGATAATAAAACTGAAATCAAACGTAGTGAATATTGGCCATCAAAAGACTATGTTGACTATGCTTATGCACCTGAGATCTTCAGTGATGAGAATCCAAATGCTTGTTCTGTTATGTAG

Protein sequence

>Msa0239570

MGEENKEEGKKEETKKEKKEEEKKEEKKDEEQPPEIVLKVDMHCEACARKVAKALKGFEGVEEVTADSKGSKVVVKGKAADPIKVLKRLQKKSGKKVELISPLPKPQEEKKEEEIKEEPKPEEKKDEPPPVVTIVLKIRMHCDACAQVIQKRIRKIKGVESVETNLGNDQAIVKGVIDPTKLVDEVFKRTKKQASIVKEEEKTEEEKKEEEKKEEVKEEEKKESEEENKGEEDDNKTEIKRSEYWPSKDYVDYAYAPEIFSDENPNACSVM*