Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317340 | KEH36987.1 | 96.552 | 145 | 3 | 2 | 1 | 145 | 87 | 229 | 1.69e-88 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317340 | sp|Q9C5D3|HIP7_ARATH | 35.393 | 178 | 71 | 2 | 12 | 145 | 178 | 355 | 5.21e-20 | 87.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0317340 | 0.808761 | 2.641656e-50 | -8.615850e-47 |
| Msa0008410 | Msa0317340 | 0.802905 | 4.493089e-49 | -8.615850e-47 |
| Msa0017510 | Msa0317340 | 0.851131 | 1.083941e-60 | -8.615850e-47 |
| Msa0028420 | Msa0317340 | 0.810263 | 1.257322e-50 | -8.615850e-47 |
| Msa0036430 | Msa0317340 | 0.802159 | 6.402808e-49 | -8.615850e-47 |
| Msa0042610 | Msa0317340 | 0.809549 | 1.790754e-50 | -8.615850e-47 |
| Msa0044020 | Msa0317340 | 0.814747 | 1.316391e-51 | -8.615850e-47 |
| Msa0050040 | Msa0317340 | 0.800815 | 1.207514e-48 | -8.615850e-47 |
| Msa0053780 | Msa0317340 | 0.823867 | 1.098890e-53 | -8.615850e-47 |
| Msa0064350 | Msa0317340 | 0.811874 | 5.626870e-51 | -8.615850e-47 |
| Msa0069330 | Msa0317340 | 0.818061 | 2.385122e-52 | -8.615850e-47 |
| Msa0072370 | Msa0317340 | 0.846616 | 1.941549e-59 | -8.615850e-47 |
| Msa0073670 | Msa0317340 | 0.805439 | 1.334341e-49 | -8.615850e-47 |
| Msa0076250 | Msa0317340 | 0.804080 | 2.564126e-49 | -8.615850e-47 |
| Msa0078650 | Msa0317340 | 0.815871 | 7.404807e-52 | -8.615850e-47 |
| Msa0089630 | Msa0317340 | 0.826137 | 3.199885e-54 | -8.615850e-47 |
| Msa0090590 | Msa0317340 | 0.805013 | 1.638678e-49 | -8.615850e-47 |
| Msa0094850 | Msa0317340 | 0.823383 | 1.426931e-53 | -8.615850e-47 |
| Msa0102990 | Msa0317340 | 0.800174 | 1.630768e-48 | -8.615850e-47 |
| Msa0104550 | Msa0317340 | 0.809298 | 2.027558e-50 | -8.615850e-47 |
| Msa0110970 | Msa0317340 | 0.843357 | 1.472828e-58 | -8.615850e-47 |
| Msa0116340 | Msa0317340 | 0.821240 | 4.484730e-53 | -8.615850e-47 |
| Msa0118570 | Msa0317340 | 0.810569 | 1.079821e-50 | -8.615850e-47 |
| Msa0126370 | Msa0317340 | 0.814282 | 1.667684e-51 | -8.615850e-47 |
| Msa0134610 | Msa0317340 | 0.810724 | 9.998237e-51 | -8.615850e-47 |
| Msa0140780 | Msa0317340 | 0.814428 | 1.548744e-51 | -8.615850e-47 |
| Msa0140820 | Msa0317340 | 0.809018 | 2.328276e-50 | -8.615850e-47 |
| Msa0148100 | Msa0317340 | 0.814697 | 1.350301e-51 | -8.615850e-47 |
| Msa0157290 | Msa0317340 | 0.851226 | 1.019018e-60 | -8.615850e-47 |
| Msa0160830 | Msa0317340 | 0.802891 | 4.523935e-49 | -8.615850e-47 |
| Msa0163980 | Msa0317340 | 0.813967 | 1.957589e-51 | -8.615850e-47 |
| Msa0168500 | Msa0317340 | 0.806427 | 8.269776e-50 | -8.615850e-47 |
| Msa0182620 | Msa0317340 | -0.835216 | 1.909404e-56 | -8.615850e-47 |
| Msa0185490 | Msa0317340 | 0.803258 | 3.798901e-49 | -8.615850e-47 |
| Msa0195630 | Msa0317340 | 0.805186 | 1.507368e-49 | -8.615850e-47 |
| Msa0197420 | Msa0317340 | 0.827899 | 1.212505e-54 | -8.615850e-47 |
| Msa0197930 | Msa0317340 | 0.877485 | 6.051946e-69 | -8.615850e-47 |
| Msa0200260 | Msa0317340 | 0.801170 | 1.021790e-48 | -8.615850e-47 |
| Msa0205840 | Msa0317340 | 0.800895 | 1.162623e-48 | -8.615850e-47 |
| Msa0218780 | Msa0317340 | 0.811642 | 6.321909e-51 | -8.615850e-47 |
| Msa0219190 | Msa0317340 | 0.821939 | 3.091518e-53 | -8.615850e-47 |
| Msa0223080 | Msa0317340 | 0.817374 | 3.409727e-52 | -8.615850e-47 |
| Msa0231650 | Msa0317340 | 0.805987 | 1.023486e-49 | -8.615850e-47 |
| Msa0239190 | Msa0317340 | 0.848186 | 7.196622e-60 | -8.615850e-47 |
| Msa0239570 | Msa0317340 | 0.856634 | 2.816779e-62 | -8.615850e-47 |
| Msa0240150 | Msa0317340 | 0.800171 | 1.633304e-48 | -8.615850e-47 |
| Msa0243100 | Msa0317340 | 0.817709 | 2.865585e-52 | -8.615850e-47 |
| Msa0270320 | Msa0317340 | 0.824970 | 6.047636e-54 | -8.615850e-47 |
| Msa0277180 | Msa0317340 | 0.828881 | 7.025751e-55 | -8.615850e-47 |
| Msa0284420 | Msa0317340 | 0.804857 | 1.766155e-49 | -8.615850e-47 |
| Msa0287650 | Msa0317340 | 0.822638 | 2.128822e-53 | -8.615850e-47 |
| Msa0292400 | Msa0317340 | 0.805439 | 1.334228e-49 | -8.615850e-47 |
| Msa0298240 | Msa0317340 | 0.812562 | 3.982157e-51 | -8.615850e-47 |
| Msa0300120 | Msa0317340 | 0.803285 | 3.749524e-49 | -8.615850e-47 |
| Msa0302160 | Msa0317340 | 0.818977 | 1.478831e-52 | -8.615850e-47 |
| Msa0306300 | Msa0317340 | 0.811973 | 5.355886e-51 | -8.615850e-47 |
| Msa0311700 | Msa0317340 | 0.825766 | 3.918544e-54 | -8.615850e-47 |
| Msa0316810 | Msa0317340 | 0.837746 | 4.333735e-57 | -8.615850e-47 |
| Msa0317280 | Msa0317340 | 0.882518 | 9.737842e-71 | -8.615850e-47 |
| Msa0317340 | Msa0333920 | 0.824936 | 6.158753e-54 | -8.615850e-47 |
| Msa0317340 | Msa0334040 | 0.822561 | 2.217556e-53 | -8.615850e-47 |
| Msa0317340 | Msa0337540 | 0.808769 | 2.631926e-50 | -8.615850e-47 |
| Msa0317340 | Msa0339490 | 0.820016 | 8.569435e-53 | -8.615850e-47 |
| Msa0317340 | Msa0339500 | 0.816684 | 4.871204e-52 | -8.615850e-47 |
| Msa0317340 | Msa0344570 | 0.846252 | 2.441117e-59 | -8.615850e-47 |
| Msa0317340 | Msa0345330 | 0.802691 | 4.975873e-49 | -8.615850e-47 |
| Msa0317340 | Msa0369170 | 0.822234 | 2.641324e-53 | -8.615850e-47 |
| Msa0317340 | Msa0369450 | 0.806582 | 7.671432e-50 | -8.615850e-47 |
| Msa0317340 | Msa0392420 | 0.847274 | 1.283082e-59 | -8.615850e-47 |
| Msa0317340 | Msa0392460 | 0.845655 | 3.546668e-59 | -8.615850e-47 |
| Msa0317340 | Msa0392490 | 0.857686 | 1.378704e-62 | -8.615850e-47 |
| Msa0317340 | Msa0407920 | 0.815555 | 8.708518e-52 | -8.615850e-47 |
| Msa0317340 | Msa0410650 | 0.808630 | 2.817945e-50 | -8.615850e-47 |
| Msa0317340 | Msa0417880 | 0.800147 | 1.651936e-48 | -8.615850e-47 |
| Msa0317340 | Msa0425400 | 0.806943 | 6.435887e-50 | -8.615850e-47 |
| Msa0317340 | Msa0436050 | 0.805575 | 1.249651e-49 | -8.615850e-47 |
| Msa0317340 | Msa0436490 | -0.814211 | 1.729344e-51 | -8.615850e-47 |
| Msa0317340 | Msa0450440 | 0.809747 | 1.623697e-50 | -8.615850e-47 |
| Msa0317340 | Msa0461720 | 0.818243 | 2.169744e-52 | -8.615850e-47 |
| Msa0317340 | Msa0461730 | 0.807687 | 4.475167e-50 | -8.615850e-47 |
| Msa0317340 | Msa0475790 | 0.824512 | 7.755385e-54 | -8.615850e-47 |
| Msa0317340 | Msa0487570 | 0.846152 | 2.599529e-59 | -8.615850e-47 |
| Msa0317340 | Msa0487630 | 0.862962 | 3.493319e-64 | -8.615850e-47 |
| Msa0317340 | Msa0503580 | 0.809574 | 1.768766e-50 | -8.615850e-47 |
| Msa0317340 | Msa0507680 | 0.805276 | 1.443180e-49 | -8.615850e-47 |
| Msa0317340 | Msa0510980 | 0.800309 | 1.531283e-48 | -8.615850e-47 |
| Msa0317340 | Msa0513160 | 0.802576 | 5.254044e-49 | -8.615850e-47 |
| Msa0317340 | Msa0524500 | 0.822089 | 2.854849e-53 | -8.615850e-47 |
| Msa0317340 | Msa0527550 | 0.945697 | 1.877103e-104 | -8.615850e-47 |
| Msa0317340 | Msa0535040 | 0.823491 | 1.346156e-53 | -8.615850e-47 |
| Msa0317340 | Msa0546680 | 0.800071 | 1.711238e-48 | -8.615850e-47 |
| Msa0317340 | Msa0552810 | 0.828459 | 8.886741e-55 | -8.615850e-47 |
| Msa0317340 | Msa0560070 | 0.802931 | 4.438949e-49 | -8.615850e-47 |
| Msa0317340 | Msa0574890 | 0.813621 | 2.333081e-51 | -8.615850e-47 |
| Msa0317340 | Msa0612290 | 0.807122 | 5.896100e-50 | -8.615850e-47 |
| Msa0317340 | Msa0624510 | 0.806069 | 9.839974e-50 | -8.615850e-47 |
| Msa0317340 | Msa0630830 | 0.826996 | 1.995847e-54 | -8.615850e-47 |
| Msa0317340 | Msa0641190 | 0.807990 | 3.858117e-50 | -8.615850e-47 |
| Msa0317340 | Msa0641210 | 0.808100 | 3.656588e-50 | -8.615850e-47 |
| Msa0317340 | Msa0643890 | 0.802469 | 5.527179e-49 | -8.615850e-47 |
| Msa0317340 | Msa0662500 | 0.815506 | 8.930153e-52 | -8.615850e-47 |
| Msa0317340 | Msa0682330 | 0.809110 | 2.224913e-50 | -8.615850e-47 |
| Msa0317340 | Msa0683510 | 0.804194 | 2.428311e-49 | -8.615850e-47 |
| Msa0317340 | Msa0683570 | 0.807131 | 5.870984e-50 | -8.615850e-47 |
| Msa0317340 | Msa0684500 | 0.817580 | 3.063573e-52 | -8.615850e-47 |
| Msa0317340 | Msa0720820 | 0.805340 | 1.399229e-49 | -8.615850e-47 |
| Msa0317340 | Msa0750880 | 0.806491 | 8.016241e-50 | -8.615850e-47 |
| Msa0317340 | Msa0754520 | 0.809183 | 2.146097e-50 | -8.615850e-47 |
| Msa0317340 | Msa0761940 | 0.825870 | 3.703286e-54 | -8.615850e-47 |
| Msa0317340 | Msa0765240 | 0.802949 | 4.400860e-49 | -8.615850e-47 |
| Msa0317340 | Msa0779870 | 0.803277 | 3.764244e-49 | -8.615850e-47 |
| Msa0317340 | Msa0780740 | 0.807938 | 3.958822e-50 | -8.615850e-47 |
| Msa0317340 | Msa0784200 | 0.830065 | 3.622217e-55 | -8.615850e-47 |
| Msa0317340 | Msa0785210 | 0.808807 | 2.583314e-50 | -8.615850e-47 |
| Msa0317340 | Msa0787260 | 0.824481 | 7.884027e-54 | -8.615850e-47 |
| Msa0317340 | Msa0803890 | 0.806464 | 8.121279e-50 | -8.615850e-47 |
| Msa0317340 | Msa0818310 | 0.850666 | 1.465559e-60 | -8.615850e-47 |
| Msa0317340 | Msa0826130 | 0.825369 | 4.865998e-54 | -8.615850e-47 |
| Msa0317340 | Msa0828560 | 0.805991 | 1.021643e-49 | -8.615850e-47 |
| Msa0317340 | Msa0833220 | 0.818991 | 1.468306e-52 | -8.615850e-47 |
| Msa0317340 | Msa0841940 | 0.817076 | 3.977126e-52 | -8.615850e-47 |
| Msa0317340 | Msa0858770 | 0.837841 | 4.097796e-57 | -8.615850e-47 |
| Msa0317340 | Msa0863010 | 0.800107 | 1.683300e-48 | -8.615850e-47 |
| Msa0317340 | Msa0869100 | 0.802919 | 4.463216e-49 | -8.615850e-47 |
| Msa0317340 | Msa0872310 | 0.815946 | 7.124462e-52 | -8.615850e-47 |
| Msa0317340 | Msa0880140 | 0.851811 | 6.958172e-61 | -8.615850e-47 |
| Msa0317340 | Msa0884410 | -0.807707 | 4.431323e-50 | -8.615850e-47 |
| Msa0317340 | Msa0896540 | 0.815942 | 7.138447e-52 | -8.615850e-47 |
| Msa0317340 | Msa0896970 | 0.832458 | 9.345393e-56 | -8.615850e-47 |
| Msa0317340 | Msa0902760 | 0.812976 | 3.233282e-51 | -8.615850e-47 |
| Msa0317340 | Msa0936340 | 0.854570 | 1.126900e-61 | -8.615850e-47 |
| Msa0317340 | Msa0936410 | 0.831975 | 1.230864e-55 | -8.615850e-47 |
| Msa0317340 | Msa0937550 | 0.801282 | 9.690606e-49 | -8.615850e-47 |
| Msa0317340 | Msa0944760 | 0.808809 | 2.580877e-50 | -8.615850e-47 |
| Msa0317340 | Msa0961690 | 0.819260 | 1.274890e-52 | -8.615850e-47 |
| Msa0317340 | Msa0968590 | 0.831695 | 1.442754e-55 | -8.615850e-47 |
| Msa0317340 | Msa0969200 | 0.806527 | 7.879596e-50 | -8.615850e-47 |
| Msa0317340 | Msa0973250 | 0.814948 | 1.187621e-51 | -8.615850e-47 |
| Msa0317340 | Msa0979510 | 0.805031 | 1.624690e-49 | -8.615850e-47 |
| Msa0317340 | Msa0996390 | 0.818967 | 1.486610e-52 | -8.615850e-47 |
| Msa0317340 | Msa1004550 | 0.809748 | 1.623108e-50 | -8.615850e-47 |
| Msa0317340 | Msa1004600 | 0.814364 | 1.599728e-51 | -8.615850e-47 |
| Msa0317340 | Msa1005870 | 0.824135 | 9.511186e-54 | -8.615850e-47 |
| Msa0317340 | Msa1013400 | 0.823451 | 1.375107e-53 | -8.615850e-47 |
| Msa0317340 | Msa1013770 | 0.815415 | 9.353452e-52 | -8.615850e-47 |
| Msa0317340 | Msa1037900 | 0.811394 | 7.157994e-51 | -8.615850e-47 |
| Msa0317340 | Msa1037910 | 0.820264 | 7.517603e-53 | -8.615850e-47 |
| Msa0317340 | Msa1037920 | 0.823840 | 1.115563e-53 | -8.615850e-47 |
| Msa0317340 | Msa1040400 | 0.827781 | 1.294071e-54 | -8.615850e-47 |
| Msa0317340 | Msa1041530 | 0.829398 | 5.264572e-55 | -8.615850e-47 |
| Msa0317340 | Msa1041900 | 0.800618 | 1.324265e-48 | -8.615850e-47 |
| Msa0317340 | Msa1047980 | 0.802576 | 5.254499e-49 | -8.615850e-47 |
| Msa0317340 | Msa1066490 | 0.803011 | 4.273174e-49 | -8.615850e-47 |
| Msa0317340 | Msa1078170 | 0.802023 | 6.830771e-49 | -8.615850e-47 |
| Msa0317340 | Msa1081570 | 0.835034 | 2.122216e-56 | -8.615850e-47 |
| Msa0317340 | Msa1083150 | 0.813274 | 2.780569e-51 | -8.615850e-47 |
| Msa0317340 | Msa1085200 | 0.809522 | 1.814804e-50 | -8.615850e-47 |
| Msa0317340 | Msa1092010 | 0.817143 | 3.842339e-52 | -8.615850e-47 |
| Msa0317340 | Msa1093530 | 0.812716 | 3.686383e-51 | -8.615850e-47 |
| Msa0317340 | Msa1093840 | 0.822243 | 2.629126e-53 | -8.615850e-47 |
| Msa0317340 | Msa1103500 | 0.800493 | 1.404257e-48 | -8.615850e-47 |
| Msa0317340 | Msa1108160 | 0.814299 | 1.653684e-51 | -8.615850e-47 |
| Msa0317340 | Msa1123380 | 0.808718 | 2.698822e-50 | -8.615850e-47 |
| Msa0317340 | Msa1125940 | 0.822800 | 1.951329e-53 | -8.615850e-47 |
| Msa0317340 | Msa1126510 | 0.823945 | 1.053942e-53 | -8.615850e-47 |
| Msa0317340 | Msa1126770 | 0.804440 | 2.157715e-49 | -8.615850e-47 |
| Msa0317340 | Msa1127140 | 0.836098 | 1.141921e-56 | -8.615850e-47 |
| Msa0317340 | Msa1127890 | 0.839205 | 1.821678e-57 | -8.615850e-47 |
| Msa0317340 | Msa1127950 | 0.802138 | 6.466982e-49 | -8.615850e-47 |
| Msa0317340 | Msa1129960 | 0.814693 | 1.353211e-51 | -8.615850e-47 |
| Msa0317340 | Msa1129970 | 0.807507 | 4.886057e-50 | -8.615850e-47 |
| Msa0317340 | Msa1129980 | 0.837140 | 6.195119e-57 | -8.615850e-47 |
| Msa0317340 | Msa1134110 | 0.829002 | 6.568737e-55 | -8.615850e-47 |
| Msa0317340 | Msa1135390 | 0.808270 | 3.362763e-50 | -8.615850e-47 |
| Msa0317340 | Msa1139810 | 0.844398 | 7.750130e-59 | -8.615850e-47 |
| Msa0317340 | Msa1140690 | 0.815468 | 9.104862e-52 | -8.615850e-47 |
| Msa0317340 | Msa1151910 | 0.804272 | 2.339392e-49 | -8.615850e-47 |
| Msa0317340 | Msa1165870 | 0.831793 | 1.364424e-55 | -8.615850e-47 |
| Msa0317340 | Msa1166400 | 0.838498 | 2.775720e-57 | -8.615850e-47 |
| Msa0317340 | Msa1169990 | 0.802125 | 6.508840e-49 | -8.615850e-47 |
| Msa0317340 | Msa1172450 | 0.826150 | 3.176235e-54 | -8.615850e-47 |
| Msa0317340 | Msa1172670 | 0.806611 | 7.564302e-50 | -8.615850e-47 |
| Msa0317340 | Msa1179460 | 0.810501 | 1.117302e-50 | -8.615850e-47 |
| Msa0317340 | Msa1187840 | 0.800411 | 1.459816e-48 | -8.615850e-47 |
| Msa0317340 | Msa1193290 | 0.802033 | 6.796698e-49 | -8.615850e-47 |
| Msa0317340 | Msa1218280 | -0.800560 | 1.361125e-48 | -8.615850e-47 |
| Msa0317340 | Msa1218550 | 0.807426 | 5.084391e-50 | -8.615850e-47 |
| Msa0317340 | Msa1218600 | 0.828717 | 7.696336e-55 | -8.615850e-47 |
| Msa0317340 | Msa1221060 | 0.836139 | 1.114662e-56 | -8.615850e-47 |
| Msa0317340 | Msa1251160 | 0.840628 | 7.755391e-58 | -8.615850e-47 |
| Msa0317340 | Msa1254700 | 0.805255 | 1.458398e-49 | -8.615850e-47 |
| Msa0317340 | Msa1274520 | 0.800326 | 1.518812e-48 | -8.615850e-47 |
| Msa0317340 | Msa1283170 | 0.825203 | 5.327751e-54 | -8.615850e-47 |
| Msa0317340 | Msa1294900 | 0.803698 | 3.078998e-49 | -8.615850e-47 |
| Msa0317340 | Msa1303240 | 0.812644 | 3.822399e-51 | -8.615850e-47 |
| Msa0317340 | Msa1303250 | 0.847717 | 9.688659e-60 | -8.615850e-47 |
| Msa0317340 | Msa1307950 | 0.813728 | 2.210122e-51 | -8.615850e-47 |
| Msa0317340 | Msa1331910 | 0.822126 | 2.799064e-53 | -8.615850e-47 |
| Msa0317340 | Msa1342900 | 0.812875 | 3.401835e-51 | -8.615850e-47 |
| Msa0317340 | Msa1346370 | 0.812451 | 4.212431e-51 | -8.615850e-47 |
| Msa0317340 | Msa1351760 | 0.808454 | 3.073218e-50 | -8.615850e-47 |
| Msa0317340 | Msa1353060 | 0.803225 | 3.858152e-49 | -8.615850e-47 |
| Msa0317340 | Msa1361400 | 0.814955 | 1.183434e-51 | -8.615850e-47 |
| Msa0317340 | Msa1361410 | 0.842186 | 3.015568e-58 | -8.615850e-47 |
| Msa0317340 | Msa1367880 | 0.801918 | 7.178408e-49 | -8.615850e-47 |
| Msa0317340 | Msa1374550 | 0.863861 | 1.839166e-64 | -8.615850e-47 |
| Msa0317340 | Msa1420060 | 0.837859 | 4.052434e-57 | -8.615850e-47 |
| Msa0317340 | Msa1421550 | 0.834682 | 2.602211e-56 | -8.615850e-47 |
| Msa0317340 | Msa1422580 | 0.803605 | 3.218590e-49 | -8.615850e-47 |
| Msa0317340 | Msa1423460 | 0.804326 | 2.279266e-49 | -8.615850e-47 |
| Msa0317340 | Msa1430240 | 0.910737 | 1.340444e-82 | -8.615850e-47 |
| Msa0317340 | Msa1436570 | 0.806622 | 7.523768e-50 | -8.615850e-47 |
| Msa0317340 | Msa1445190 | 0.801917 | 7.181980e-49 | -8.615850e-47 |
| Msa0317340 | Msa1446810 | 0.807802 | 4.231448e-50 | -8.615850e-47 |
| Msa0317340 | Msa1446820 | 0.823124 | 1.640071e-53 | -8.615850e-47 |
| Msa0317340 | Msa1446830 | 0.804832 | 1.787637e-49 | -8.615850e-47 |
| Msa0317340 | Msa1451160 | 0.814125 | 1.806622e-51 | -8.615850e-47 |
| Msa0317340 | Msa1457910 | 0.807771 | 4.295809e-50 | -8.615850e-47 |
| Msa0317340 | Msa1460020 | 0.807948 | 3.938344e-50 | -8.615850e-47 |
| Msa0317340 | Msa1460390 | 0.807500 | 4.904246e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317340 | MtrunA17_Chr2g0290471 | 96.552 | 145 | 3 | 2 | 1 | 145 | 127 | 269 | 2.31e-92 | 268 |
| Msa0317340 | MtrunA17_Chr8g0386231 | 39.535 | 172 | 72 | 4 | 5 | 145 | 151 | 321 | 3.99e-28 | 105 |
| Msa0317340 | MtrunA17_Chr3g0128091 | 40.000 | 160 | 76 | 4 | 5 | 144 | 124 | 283 | 7.70e-25 | 96.3 |
| Msa0317340 | MtrunA17_Chr3g0132061 | 44.633 | 177 | 63 | 4 | 2 | 145 | 128 | 302 | 9.56e-25 | 96.3 |
| Msa0317340 | MtrunA17_Chr3g0132051 | 44.755 | 143 | 71 | 2 | 5 | 145 | 130 | 266 | 1.17e-21 | 87.4 |
| Msa0317340 | MtrunA17_Chr3g0094841 | 33.803 | 142 | 75 | 2 | 4 | 145 | 115 | 237 | 1.10e-17 | 76.6 |
| Msa0317340 | MtrunA17_Chr8g0337951 | 39.073 | 151 | 82 | 2 | 2 | 144 | 116 | 264 | 2.33e-16 | 73.2 |
| Msa0317340 | MtrunA17_Chr8g0343041 | 41.176 | 68 | 40 | 0 | 3 | 70 | 71 | 138 | 9.95e-14 | 66.6 |
| Msa0317340 | MtrunA17_Chr1g0180631 | 26.263 | 198 | 88 | 5 | 6 | 145 | 136 | 333 | 1.92e-12 | 63.2 |
| Msa0317340 | MtrunA17_Chr4g0028461 | 38.043 | 92 | 56 | 1 | 8 | 98 | 69 | 160 | 1.61e-11 | 60.5 |
| Msa0317340 | MtrunA17_Chr5g0429111 | 33.333 | 180 | 79 | 3 | 6 | 144 | 142 | 321 | 3.00e-11 | 59.7 |
| Msa0317340 | MtrunA17_Chr5g0429111 | 31.707 | 82 | 56 | 0 | 8 | 89 | 56 | 137 | 5.66e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317340 | AT5G50740.5 | 42.236 | 161 | 74 | 4 | 4 | 145 | 123 | 283 | 8.42e-30 | 109 |
| Msa0317340 | AT5G50740.1 | 42.236 | 161 | 74 | 4 | 4 | 145 | 123 | 283 | 8.42e-30 | 109 |
| Msa0317340 | AT5G50740.3 | 42.236 | 161 | 74 | 4 | 4 | 145 | 130 | 290 | 9.25e-30 | 109 |
| Msa0317340 | AT5G63530.2 | 35.393 | 178 | 71 | 2 | 12 | 145 | 163 | 340 | 4.32e-21 | 87.4 |
| Msa0317340 | AT5G63530.1 | 35.393 | 178 | 71 | 2 | 12 | 145 | 178 | 355 | 5.29e-21 | 87.4 |
| Msa0317340 | AT3G02960.1 | 31.944 | 144 | 78 | 2 | 2 | 145 | 123 | 246 | 6.56e-19 | 80.1 |
| Msa0317340 | AT5G24580.5 | 29.050 | 179 | 85 | 3 | 4 | 144 | 57 | 231 | 2.57e-18 | 78.6 |
| Msa0317340 | AT5G24580.3 | 29.050 | 179 | 85 | 3 | 4 | 144 | 141 | 315 | 1.69e-17 | 77.4 |
| Msa0317340 | AT5G24580.2 | 29.050 | 179 | 85 | 3 | 4 | 144 | 143 | 317 | 1.86e-17 | 77.4 |
| Msa0317340 | AT5G24580.2 | 37.500 | 64 | 40 | 0 | 7 | 70 | 57 | 120 | 8.27e-11 | 58.9 |
| Msa0317340 | AT5G24580.4 | 29.050 | 179 | 85 | 3 | 4 | 144 | 144 | 318 | 2.19e-17 | 77.0 |
| Msa0317340 | AT5G24580.4 | 37.500 | 64 | 40 | 0 | 7 | 70 | 58 | 121 | 8.06e-11 | 58.9 |
| Msa0317340 | AT5G24580.1 | 29.050 | 179 | 85 | 3 | 4 | 144 | 144 | 318 | 2.19e-17 | 77.0 |
| Msa0317340 | AT5G24580.1 | 37.500 | 64 | 40 | 0 | 7 | 70 | 58 | 121 | 8.06e-11 | 58.9 |
| Msa0317340 | AT5G60800.1 | 33.758 | 157 | 86 | 3 | 3 | 145 | 131 | 283 | 2.75e-14 | 68.2 |
| Msa0317340 | AT5G60800.2 | 33.121 | 157 | 87 | 3 | 3 | 145 | 131 | 283 | 2.17e-13 | 65.9 |
Find 20 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAAGAAGAGGAGAAAA+AGG | 0.192651 | 2_4:-15015806 | Msa0317340:CDS |
| AAACGTATCCGTAAGATTAA+AGG | 0.281091 | 2_4:-15016606 | Msa0317340:intron |
| AGAATCAGTGGAAACAGATT+TGG | 0.303796 | 2_4:-15015947 | Msa0317340:CDS |
| AATGATCAAGCCATAGTAAA+AGG | 0.311623 | 2_4:-15015922 | Msa0317340:CDS |
| ACTTCATCAACAAGCTTTGC+TGG | 0.318902 | 2_4:+15015889 | None:intergenic |
| AAATCAAACGTAGTGAATAT+TGG | 0.336929 | 2_4:-15015708 | Msa0317340:CDS |
| TACATAACAGAACAAGCATT+TGG | 0.386302 | 2_4:+15015628 | None:intergenic |
| TCTTTGTACCTTTAATCTTA+CGG | 0.421997 | 2_4:+15016598 | None:intergenic |
| GAATCAGTGGAAACAGATTT+GGG | 0.429156 | 2_4:-15015946 | Msa0317340:CDS |
| TGTGAAGGAGGAAGAAAAGA+AGG | 0.465697 | 2_4:-15015836 | Msa0317340:CDS |
| TTCTCATCACTGAAAATCTC+AGG | 0.471345 | 2_4:+15015652 | None:intergenic |
| GAAAGTGAAGAAGAAAACAA+AGG | 0.495745 | 2_4:-15015754 | Msa0317340:CDS |
| AGAACTATTGTTACCACAGG+TGG | 0.515740 | 2_4:+15016672 | None:intergenic |
| TTGAGAACTATTGTTACCAC+AGG | 0.539096 | 2_4:+15016669 | None:intergenic |
| GGAAGAAGAGAAGAAAGAAG+AGG | 0.545102 | 2_4:-15015815 | Msa0317340:CDS |
| GCAAGCTTCTATTGTGAAGG+AGG | 0.578314 | 2_4:-15015848 | Msa0317340:CDS |
| AAAGCAAGCTTCTATTGTGA+AGG | 0.586936 | 2_4:-15015851 | Msa0317340:CDS |
| TTGTTGATGAAGTGTTCAAG+AGG | 0.592575 | 2_4:-15015879 | Msa0317340:CDS |
| ACTATTGTTACCACAGGTGG+AGG | 0.612633 | 2_4:+15016675 | None:intergenic |
| ATATGCAGGAGTAGAATCAG+TGG | 0.635889 | 2_4:-15015959 | Msa0317340:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATGTGCTTTATCTAAA+AGG | + | chr2_4:15015946-15015965 | None:intergenic | 20.0% |
| !! | TTATAAAGATAGGAGTTTAT+AGG | + | chr2_4:15016234-15016253 | None:intergenic | 20.0% |
| !! | TCAAATTATGTTTATTTCAG+TGG | + | chr2_4:15016279-15016298 | None:intergenic | 20.0% |
| !! | GTGTTAATAATAATATATGC+AGG | - | chr2_4:15016329-15016348 | Msa0317340:intron | 20.0% |
| !! | ATTAATGTGCTTTATCTAAA+AGG | + | chr2_4:15015946-15015965 | None:intergenic | 20.0% |
| !! | TTATAAAGATAGGAGTTTAT+AGG | + | chr2_4:15016234-15016253 | None:intergenic | 20.0% |
| !! | TCAAATTATGTTTATTTCAG+TGG | + | chr2_4:15016279-15016298 | None:intergenic | 20.0% |
| !! | GTGTTAATAATAATATATGC+AGG | - | chr2_4:15016329-15016348 | Msa0317340:intron | 20.0% |
| ! | TCTTTGTACCTTTAATCTTA+CGG | + | chr2_4:15015707-15015726 | None:intergenic | 25.0% |
| ! | AACGATCACATTATAAAGAT+AGG | + | chr2_4:15016244-15016263 | None:intergenic | 25.0% |
| ! | AAATCAAACGTAGTGAATAT+TGG | - | chr2_4:15016594-15016613 | Msa0317340:intron | 25.0% |
| ! | TCTTTGTACCTTTAATCTTA+CGG | + | chr2_4:15015707-15015726 | None:intergenic | 25.0% |
| ! | AACGATCACATTATAAAGAT+AGG | + | chr2_4:15016244-15016263 | None:intergenic | 25.0% |
| ! | AAATCAAACGTAGTGAATAT+TGG | - | chr2_4:15016594-15016613 | Msa0317340:intron | 25.0% |
| AAACGTATCCGTAAGATTAA+AGG | - | chr2_4:15015696-15015715 | Msa0317340:CDS | 30.0% | |
| AATACCAACAAGATTGAAAG+AGG | + | chr2_4:15015736-15015755 | None:intergenic | 30.0% | |
| TTACAGTGTCATGAAGAAAA+TGG | - | chr2_4:15015842-15015861 | Msa0317340:CDS | 30.0% | |
| ATGTGCTTTATCTAAAAGGA+TGG | + | chr2_4:15015942-15015961 | None:intergenic | 30.0% | |
| TAAGTTGTCTAATGATCTCA+TGG | + | chr2_4:15016041-15016060 | None:intergenic | 30.0% | |
| AATGATCAAGCCATAGTAAA+AGG | - | chr2_4:15016380-15016399 | Msa0317340:intron | 30.0% | |
| ! | ATCAATCACTCCTTTTACTA+TGG | + | chr2_4:15016393-15016412 | None:intergenic | 30.0% |
| AAAAAGGAAGAAGTCAAAGA+AGG | - | chr2_4:15016512-15016531 | Msa0317340:intron | 30.0% | |
| GAAAGTGAAGAAGAAAACAA+AGG | - | chr2_4:15016548-15016567 | Msa0317340:intron | 30.0% | |
| ! | TAGTCAACATAGTCTTTTGA+TGG | + | chr2_4:15016620-15016639 | None:intergenic | 30.0% |
| TACATAACAGAACAAGCATT+TGG | + | chr2_4:15016677-15016696 | None:intergenic | 30.0% | |
| AAACGTATCCGTAAGATTAA+AGG | - | chr2_4:15015696-15015715 | Msa0317340:CDS | 30.0% | |
| AATACCAACAAGATTGAAAG+AGG | + | chr2_4:15015736-15015755 | None:intergenic | 30.0% | |
| TTACAGTGTCATGAAGAAAA+TGG | - | chr2_4:15015842-15015861 | Msa0317340:CDS | 30.0% | |
| ATGTGCTTTATCTAAAAGGA+TGG | + | chr2_4:15015942-15015961 | None:intergenic | 30.0% | |
| TAAGTTGTCTAATGATCTCA+TGG | + | chr2_4:15016041-15016060 | None:intergenic | 30.0% | |
| AATGATCAAGCCATAGTAAA+AGG | - | chr2_4:15016380-15016399 | Msa0317340:intron | 30.0% | |
| ! | ATCAATCACTCCTTTTACTA+TGG | + | chr2_4:15016393-15016412 | None:intergenic | 30.0% |
| AAAAAGGAAGAAGTCAAAGA+AGG | - | chr2_4:15016512-15016531 | Msa0317340:intron | 30.0% | |
| GAAAGTGAAGAAGAAAACAA+AGG | - | chr2_4:15016548-15016567 | Msa0317340:intron | 30.0% | |
| ! | TAGTCAACATAGTCTTTTGA+TGG | + | chr2_4:15016620-15016639 | None:intergenic | 30.0% |
| TACATAACAGAACAAGCATT+TGG | + | chr2_4:15016677-15016696 | None:intergenic | 30.0% | |
| TTGAGAACTATTGTTACCAC+AGG | + | chr2_4:15015636-15015655 | None:intergenic | 35.0% | |
| CAACAAGATTGAAAGAGGAA+AGG | + | chr2_4:15015731-15015750 | None:intergenic | 35.0% | |
| CTTTCCTCTTTCAATCTTGT+TGG | - | chr2_4:15015729-15015748 | Msa0317340:CDS | 35.0% | |
| !! | CATCTTTGATTTGCATCGAA+CGG | - | chr2_4:15016066-15016085 | Msa0317340:intron | 35.0% |
| TGCAAGAAGTTAGATAGAAG+TGG | + | chr2_4:15016128-15016147 | None:intergenic | 35.0% | |
| CTTCTATCTAACTTCTTGCA+TGG | - | chr2_4:15016128-15016147 | Msa0317340:intron | 35.0% | |
| CAACTATCTAACTTCTTGCA+TGG | - | chr2_4:15016176-15016195 | Msa0317340:intron | 35.0% | |
| AGAATCAGTGGAAACAGATT+TGG | - | chr2_4:15016355-15016374 | Msa0317340:intron | 35.0% | |
| GAATCAGTGGAAACAGATTT+GGG | - | chr2_4:15016356-15016375 | Msa0317340:intron | 35.0% | |
| ! | TTGTTGATGAAGTGTTCAAG+AGG | - | chr2_4:15016423-15016442 | Msa0317340:intron | 35.0% |
| AAAGCAAGCTTCTATTGTGA+AGG | - | chr2_4:15016451-15016470 | Msa0317340:intron | 35.0% | |
| GAAGAAAGAAGAGGAGAAAA+AGG | - | chr2_4:15016496-15016515 | Msa0317340:intron | 35.0% | |
| TTCTCATCACTGAAAATCTC+AGG | + | chr2_4:15016653-15016672 | None:intergenic | 35.0% | |
| TTGAGAACTATTGTTACCAC+AGG | + | chr2_4:15015636-15015655 | None:intergenic | 35.0% | |
| CAACAAGATTGAAAGAGGAA+AGG | + | chr2_4:15015731-15015750 | None:intergenic | 35.0% | |
| CTTTCCTCTTTCAATCTTGT+TGG | - | chr2_4:15015729-15015748 | Msa0317340:CDS | 35.0% | |
| !! | CATCTTTGATTTGCATCGAA+CGG | - | chr2_4:15016066-15016085 | Msa0317340:intron | 35.0% |
| TGCAAGAAGTTAGATAGAAG+TGG | + | chr2_4:15016128-15016147 | None:intergenic | 35.0% | |
| CTTCTATCTAACTTCTTGCA+TGG | - | chr2_4:15016128-15016147 | Msa0317340:intron | 35.0% | |
| CAACTATCTAACTTCTTGCA+TGG | - | chr2_4:15016176-15016195 | Msa0317340:intron | 35.0% | |
| AGAATCAGTGGAAACAGATT+TGG | - | chr2_4:15016355-15016374 | Msa0317340:intron | 35.0% | |
| GAATCAGTGGAAACAGATTT+GGG | - | chr2_4:15016356-15016375 | Msa0317340:intron | 35.0% | |
| ! | TTGTTGATGAAGTGTTCAAG+AGG | - | chr2_4:15016423-15016442 | Msa0317340:intron | 35.0% |
| AAAGCAAGCTTCTATTGTGA+AGG | - | chr2_4:15016451-15016470 | Msa0317340:intron | 35.0% | |
| GAAGAAAGAAGAGGAGAAAA+AGG | - | chr2_4:15016496-15016515 | Msa0317340:intron | 35.0% | |
| TTCTCATCACTGAAAATCTC+AGG | + | chr2_4:15016653-15016672 | None:intergenic | 35.0% | |
| AGAACTATTGTTACCACAGG+TGG | + | chr2_4:15015633-15015652 | None:intergenic | 40.0% | |
| TAGCGAATCCAGATTCACTA+AGG | - | chr2_4:15015976-15015995 | Msa0317340:intron | 40.0% | |
| CTGTGTGCAACTACATAATG+TGG | + | chr2_4:15016005-15016024 | None:intergenic | 40.0% | |
| ! | ACGGTTGAGATTGATAACCA+CGG | - | chr2_4:15016085-15016104 | Msa0317340:intron | 40.0% |
| ATATGCAGGAGTAGAATCAG+TGG | - | chr2_4:15016343-15016362 | Msa0317340:intron | 40.0% | |
| ACTTCATCAACAAGCTTTGC+TGG | + | chr2_4:15016416-15016435 | None:intergenic | 40.0% | |
| TGTGAAGGAGGAAGAAAAGA+AGG | - | chr2_4:15016466-15016485 | Msa0317340:intron | 40.0% | |
| GGAAGAAGAGAAGAAAGAAG+AGG | - | chr2_4:15016487-15016506 | Msa0317340:intron | 40.0% | |
| AGAACTATTGTTACCACAGG+TGG | + | chr2_4:15015633-15015652 | None:intergenic | 40.0% | |
| TAGCGAATCCAGATTCACTA+AGG | - | chr2_4:15015976-15015995 | Msa0317340:intron | 40.0% | |
| CTGTGTGCAACTACATAATG+TGG | + | chr2_4:15016005-15016024 | None:intergenic | 40.0% | |
| ! | ACGGTTGAGATTGATAACCA+CGG | - | chr2_4:15016085-15016104 | Msa0317340:intron | 40.0% |
| ATATGCAGGAGTAGAATCAG+TGG | - | chr2_4:15016343-15016362 | Msa0317340:intron | 40.0% | |
| ACTTCATCAACAAGCTTTGC+TGG | + | chr2_4:15016416-15016435 | None:intergenic | 40.0% | |
| TGTGAAGGAGGAAGAAAAGA+AGG | - | chr2_4:15016466-15016485 | Msa0317340:intron | 40.0% | |
| GGAAGAAGAGAAGAAAGAAG+AGG | - | chr2_4:15016487-15016506 | Msa0317340:intron | 40.0% | |
| ACTATTGTTACCACAGGTGG+AGG | + | chr2_4:15015630-15015649 | None:intergenic | 45.0% | |
| TACTGTCTCCTTACCACTTG+TGG | - | chr2_4:15015772-15015791 | Msa0317340:CDS | 45.0% | |
| ! | TTTGTTGTGTGCACCACAAG+TGG | + | chr2_4:15015788-15015807 | None:intergenic | 45.0% |
| TGTGGTCACCTTAGTGAATC+TGG | + | chr2_4:15015987-15016006 | None:intergenic | 45.0% | |
| GCAAGCTTCTATTGTGAAGG+AGG | - | chr2_4:15016454-15016473 | Msa0317340:intron | 45.0% | |
| ACTATTGTTACCACAGGTGG+AGG | + | chr2_4:15015630-15015649 | None:intergenic | 45.0% | |
| TACTGTCTCCTTACCACTTG+TGG | - | chr2_4:15015772-15015791 | Msa0317340:CDS | 45.0% | |
| ! | TTTGTTGTGTGCACCACAAG+TGG | + | chr2_4:15015788-15015807 | None:intergenic | 45.0% |
| TGTGGTCACCTTAGTGAATC+TGG | + | chr2_4:15015987-15016006 | None:intergenic | 45.0% | |
| GCAAGCTTCTATTGTGAAGG+AGG | - | chr2_4:15016454-15016473 | Msa0317340:intron | 45.0% | |
| TGTGTGCACCACAAGTGGTA+AGG | + | chr2_4:15015783-15015802 | None:intergenic | 50.0% | |
| TTAATGTGCTTGATGCGCCG+TGG | + | chr2_4:15016105-15016124 | None:intergenic | 50.0% | |
| TGTGTGCACCACAAGTGGTA+AGG | + | chr2_4:15015783-15015802 | None:intergenic | 50.0% | |
| TTAATGTGCTTGATGCGCCG+TGG | + | chr2_4:15016105-15016124 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 15015627 | 15016697 | 15015627 | ID=Msa0317340;Name=Msa0317340 |
| chr2_4 | mRNA | 15015627 | 15016697 | 15015627 | ID=Msa0317340-mRNA-1;Parent=Msa0317340;Name=Msa0317340-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|2|0|145 |
| chr2_4 | exon | 15016607 | 15016697 | 15016607 | ID=Msa0317340-mRNA-1:exon:5640;Parent=Msa0317340-mRNA-1 |
| chr2_4 | exon | 15015627 | 15015973 | 15015627 | ID=Msa0317340-mRNA-1:exon:5639;Parent=Msa0317340-mRNA-1 |
| chr2_4 | CDS | 15016607 | 15016697 | 15016607 | ID=Msa0317340-mRNA-1:cds;Parent=Msa0317340-mRNA-1 |
| chr2_4 | CDS | 15015627 | 15015973 | 15015627 | ID=Msa0317340-mRNA-1:cds;Parent=Msa0317340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
