Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071020 | XP_013449058.1 | 97.400 | 423 | 11 | 0 | 1 | 423 | 1 | 423 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071020 | sp|Q9Y2M2|SSUH2_HUMAN | 29.412 | 323 | 207 | 8 | 93 | 413 | 68 | 371 | 9.73e-34 | 132 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071020 | A0A072UB64 | 97.400 | 423 | 11 | 0 | 1 | 423 | 1 | 423 | 0.0 | 854 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0097470 | Msa1071020 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0657260 | Msa1071020 | 0.806827 | 6.808530e-50 | -8.615850e-47 |
| Msa0701490 | Msa1071020 | 0.828680 | 7.858509e-55 | -8.615850e-47 |
| Msa0701560 | Msa1071020 | 0.829691 | 4.467239e-55 | -8.615850e-47 |
| Msa0727230 | Msa1071020 | 0.805946 | 1.044226e-49 | -8.615850e-47 |
| Msa0826360 | Msa1071020 | 0.802133 | 6.482474e-49 | -8.615850e-47 |
| Msa0383110 | Msa1071020 | -0.813172 | 2.927892e-51 | -8.615850e-47 |
| Msa0405200 | Msa1071020 | 0.816312 | 5.900942e-52 | -8.615850e-47 |
| Msa0415860 | Msa1071020 | -0.801883 | 7.298300e-49 | -8.615850e-47 |
| Msa0433890 | Msa1071020 | -0.812778 | 3.572438e-51 | -8.615850e-47 |
| Msa0434830 | Msa1071020 | -0.803633 | 3.176028e-49 | -8.615850e-47 |
| Msa0449500 | Msa1071020 | 0.815643 | 8.321492e-52 | -8.615850e-47 |
| Msa1038230 | Msa1071020 | -0.802214 | 6.239804e-49 | -8.615850e-47 |
| Msa1071020 | Msa1107250 | 0.813229 | 2.844851e-51 | -8.615850e-47 |
| Msa1071020 | Msa1137750 | 0.813413 | 2.591794e-51 | -8.615850e-47 |
| Msa1071020 | Msa1292560 | 0.846918 | 1.605519e-59 | -8.615850e-47 |
| Msa1071020 | Msa1342460 | -0.805178 | 1.513416e-49 | -8.615850e-47 |
| Msa1071020 | Msa1459930 | 0.814545 | 1.458859e-51 | -8.615850e-47 |
| Msa0267700 | Msa1071020 | 0.807201 | 5.674944e-50 | -8.615850e-47 |
| Msa0497680 | Msa1071020 | 0.822826 | 1.924442e-53 | -8.615850e-47 |
| Msa0508160 | Msa1071020 | 0.832059 | 1.173353e-55 | -8.615850e-47 |
| Msa0524570 | Msa1071020 | -0.812236 | 4.691822e-51 | -8.615850e-47 |
| Msa0565120 | Msa1071020 | 0.804387 | 2.213210e-49 | -8.615850e-47 |
| Msa0573940 | Msa1071020 | -0.811308 | 7.470399e-51 | -8.615850e-47 |
| Msa0597800 | Msa1071020 | 0.805464 | 1.318504e-49 | -8.615850e-47 |
| Msa0598610 | Msa1071020 | -0.805542 | 1.269542e-49 | -8.615850e-47 |
| Msa0865830 | Msa1071020 | 0.808010 | 3.821382e-50 | -8.615850e-47 |
| Msa0879820 | Msa1071020 | -0.820304 | 7.360166e-53 | -8.615850e-47 |
| Msa0881880 | Msa1071020 | -0.801011 | 1.101137e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071020 | MtrunA17_Chr7g0241151 | 97.400 | 423 | 11 | 0 | 1 | 423 | 1 | 423 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1071020 | AT2G38000.1 | 62.093 | 430 | 145 | 6 | 1 | 423 | 1 | 419 | 0.0 | 556 |
Find 127 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGACCTGAACTTGGTATT+TGG | 0.143432 | 7_2:-67366086 | Msa1071020:CDS |
| ATTGAACTCCTTTGGATCTA+TGG | 0.205179 | 7_2:+67363735 | None:intergenic |
| TTGAGTTAACTTTGTCATTA+AGG | 0.208466 | 7_2:+67367942 | None:intergenic |
| TGACAGGGAGGTTTACTTAA+AGG | 0.241321 | 7_2:-67363501 | Msa1071020:CDS |
| ATGCACCGTTCTCCATAATT+TGG | 0.276633 | 7_2:-67367896 | Msa1071020:five_prime_UTR |
| GGTTTCTATCCTCCTGTTCA+TGG | 0.277472 | 7_2:-67367571 | Msa1071020:CDS |
| TGAACTTGGTATTTGGGAAT+TGG | 0.297192 | 7_2:-67366079 | Msa1071020:CDS |
| GTTGTCCGTCTGATTATTCA+TGG | 0.299193 | 7_2:-67363210 | Msa1071020:three_prime_UTR |
| TAATCATACCTTCGGAATTC+AGG | 0.308842 | 7_2:+67367015 | None:intergenic |
| GTATTTGGGAATTGGGTCTA+AGG | 0.315147 | 7_2:-67366071 | Msa1071020:CDS |
| ATTGCATAATTGAACTCCTT+TGG | 0.315587 | 7_2:+67363727 | None:intergenic |
| CGTTGGTCATCGTTGTTGTT+GGG | 0.319437 | 7_2:-67366253 | Msa1071020:CDS |
| GGCGGATATGGAGGAGATTA+TGG | 0.320851 | 7_2:-67367048 | Msa1071020:CDS |
| GTATTATCCATTGGCTTGTA+AGG | 0.325394 | 7_2:-67363308 | Msa1071020:three_prime_UTR |
| GCAATGTAGCCATTATAAAA+TGG | 0.334240 | 7_2:-67365445 | Msa1071020:intron |
| TTGGGGCTTGTGTCCTTGTT+TGG | 0.342743 | 7_2:-67363456 | Msa1071020:CDS |
| GCTCCTGTTCCTTCTTCTGC+AGG | 0.352522 | 7_2:-67367592 | Msa1071020:CDS |
| AGGACCTGAACTTGGTATTT+GGG | 0.353750 | 7_2:-67366085 | Msa1071020:CDS |
| TTTAGACAGAGACCAAATTA+TGG | 0.354955 | 7_2:+67367884 | None:intergenic |
| GTTTCTATCCTCCTGTTCAT+GGG | 0.370906 | 7_2:-67367570 | Msa1071020:CDS |
| AATATTGATGGAAAGGATAA+AGG | 0.372577 | 7_2:-67366105 | Msa1071020:CDS |
| GTTGCTTATCAAGGCGGATA+TGG | 0.373448 | 7_2:-67367060 | Msa1071020:CDS |
| ACTCAGTGTCCTAGTTGTTA+TGG | 0.382433 | 7_2:-67365770 | Msa1071020:CDS |
| ATTAGAACAAAGAAGTGAAT+TGG | 0.383660 | 7_2:-67367716 | Msa1071020:intron |
| TCCTTCAGTTTCTATATTGT+AGG | 0.389220 | 7_2:-67363527 | Msa1071020:CDS |
| ACCTTTGTTGTATTATCCAT+TGG | 0.394895 | 7_2:-67363317 | Msa1071020:three_prime_UTR |
| GCTTGTAAGGACTACAGTTA+TGG | 0.399398 | 7_2:-67363295 | Msa1071020:three_prime_UTR |
| TGCTCGAACATGGAAGATTC+AGG | 0.412128 | 7_2:-67366220 | Msa1071020:CDS |
| TTGGGAATCAGAGTGGAAAA+TGG | 0.416412 | 7_2:-67367693 | Msa1071020:CDS |
| GAACTTGGTATTTGGGAATT+GGG | 0.416708 | 7_2:-67366078 | Msa1071020:CDS |
| ACATACAATCTCAGTTGTTC+CGG | 0.418682 | 7_2:-67363582 | Msa1071020:CDS |
| ATGGAACAACCTCTTCTATC+AGG | 0.419335 | 7_2:-67367856 | Msa1071020:intron |
| ACGTTGGTCATCGTTGTTGT+TGG | 0.419460 | 7_2:-67366254 | Msa1071020:CDS |
| TATGAGCATGTGGGTCGAAC+AGG | 0.420593 | 7_2:-67367664 | Msa1071020:CDS |
| AACAAAGAAGTGAATTGGTT+GGG | 0.425780 | 7_2:-67367711 | Msa1071020:CDS |
| TACCCTGGTGGAAATATTGA+TGG | 0.431134 | 7_2:-67366117 | Msa1071020:CDS |
| GATCTATGGAAAACTTCATC+TGG | 0.432603 | 7_2:+67363749 | None:intergenic |
| TCAACACTTACACAAGTTCC+AGG | 0.435269 | 7_2:+67367631 | None:intergenic |
| TGGACATTATAAAGAAAATC+AGG | 0.436112 | 7_2:-67365795 | Msa1071020:CDS |
| CTGTAGGGTACAAATAGAAA+AGG | 0.448232 | 7_2:+67366039 | None:intergenic |
| GAAGTTATTGAGAAATGCTC+AGG | 0.463765 | 7_2:-67365988 | Msa1071020:intron |
| TGCAATGCTGATGGAGAACC+TGG | 0.465954 | 7_2:-67365815 | Msa1071020:CDS |
| TGGATACGTTTATAGAAGAA+AGG | 0.466452 | 7_2:-67366164 | Msa1071020:CDS |
| TGAATCTTCCATGTTCGAGC+AGG | 0.474774 | 7_2:+67366222 | None:intergenic |
| GTGTCCTAGTTGTTATGGAA+GGG | 0.475063 | 7_2:-67365765 | Msa1071020:CDS |
| CGAACAGGTTCTGCATATCC+TGG | 0.475291 | 7_2:-67367649 | Msa1071020:CDS |
| TCTATATTGTAGGAAATGAC+AGG | 0.476508 | 7_2:-67363517 | Msa1071020:CDS |
| GGTTTGATTGCTCATAAAGA+TGG | 0.476633 | 7_2:-67365743 | Msa1071020:CDS |
| CTTAACTGTGAAACGTGTAA+TGG | 0.480057 | 7_2:-67365488 | Msa1071020:CDS |
| AAGCTTCCTTGTGCGACTTG+TGG | 0.485746 | 7_2:-67365524 | Msa1071020:CDS |
| ATACCTTCGGAATTCAGGTC+TGG | 0.486171 | 7_2:+67367020 | None:intergenic |
| TTCTCAATAACTTCAGAATG+AGG | 0.490617 | 7_2:+67365997 | None:intergenic |
| TGTCCTAGTTGTTATGGAAG+GGG | 0.490801 | 7_2:-67365764 | Msa1071020:CDS |
| TCAATATTTCCACCAGGGTA+TGG | 0.494935 | 7_2:+67366120 | None:intergenic |
| GTGCAAGCGGTTGCTTATCA+AGG | 0.497954 | 7_2:-67367069 | Msa1071020:CDS |
| GAACAAAGAAGTGAATTGGT+TGG | 0.499679 | 7_2:-67367712 | Msa1071020:CDS |
| GGATAGAAACCTGCAGAAGA+AGG | 0.500776 | 7_2:+67367583 | None:intergenic |
| GAAGACTGTAATGTTTATGT+TGG | 0.506847 | 7_2:-67366192 | Msa1071020:CDS |
| TCATCTGAGCCTGATCCTGC+TGG | 0.515267 | 7_2:-67367535 | Msa1071020:intron |
| ATCCACTTATAGGGAAACCT+TGG | 0.516020 | 7_2:-67366310 | Msa1071020:intron |
| AAACCTGCAGAAGAAGGAAC+AGG | 0.516529 | 7_2:+67367589 | None:intergenic |
| TAGAAGAGGTTGTTCCATGA+TGG | 0.519635 | 7_2:+67367861 | None:intergenic |
| AAGGATAAAGGACCTGAACT+TGG | 0.524416 | 7_2:-67366093 | Msa1071020:CDS |
| TTTCTATCCTCCTGTTCATG+GGG | 0.524481 | 7_2:-67367569 | Msa1071020:CDS |
| GTGTGAAATGTAATGGTAAA+GGG | 0.525645 | 7_2:-67365547 | Msa1071020:CDS |
| TGTGTGAAATGTAATGGTAA+AGG | 0.528269 | 7_2:-67365548 | Msa1071020:CDS |
| AGAACGGTGCATTATATATG+TGG | 0.529995 | 7_2:+67367907 | None:intergenic |
| CAAATGACTCTTGCAGTGGC+AGG | 0.534071 | 7_2:+67363611 | None:intergenic |
| AAGAACATACCAGCAGGATC+AGG | 0.534132 | 7_2:+67367526 | None:intergenic |
| TGTAGGGTACAAATAGAAAA+GGG | 0.540231 | 7_2:+67366040 | None:intergenic |
| TCGTATCTCTACTTCATCCA+AGG | 0.540313 | 7_2:+67366293 | None:intergenic |
| TGGTGGAAATATTGATGGAA+AGG | 0.543305 | 7_2:-67366112 | Msa1071020:CDS |
| GTTGGTCATCGTTGTTGTTG+GGG | 0.543611 | 7_2:-67366252 | Msa1071020:CDS |
| AAAAGGCAGGAGTGCATTGG+TGG | 0.545573 | 7_2:+67363696 | None:intergenic |
| GGTCTCTGTCTAAACCATCA+TGG | 0.546648 | 7_2:-67367875 | Msa1071020:exon |
| GGATACGTTTATAGAAGAAA+GGG | 0.547661 | 7_2:-67366163 | Msa1071020:CDS |
| AGTGTCCTAGTTGTTATGGA+AGG | 0.551912 | 7_2:-67365766 | Msa1071020:CDS |
| GAACGGTGCATTATATATGT+GGG | 0.554111 | 7_2:+67367908 | None:intergenic |
| AATTCCCAAATACCAAGTTC+AGG | 0.560315 | 7_2:+67366081 | None:intergenic |
| TGCAGATGTGTGAAATGTAA+TGG | 0.564143 | 7_2:-67365554 | Msa1071020:intron |
| GCTTGTGTCCTTGTTTGGAG+TGG | 0.568621 | 7_2:-67363451 | Msa1071020:CDS |
| CTGTAGTCCTTACAAGCCAA+TGG | 0.571243 | 7_2:+67363301 | None:intergenic |
| CGGAAAGTAAGTGCAACTAA+AGG | 0.571263 | 7_2:-67363785 | Msa1071020:CDS |
| TGTGCGACTTGTGGATCTCG+TGG | 0.577723 | 7_2:-67365515 | Msa1071020:CDS |
| CATGAGATTTAATCATGCAC+TGG | 0.579389 | 7_2:+67363232 | None:intergenic |
| TTTCCATCAATATTTCCACC+AGG | 0.579726 | 7_2:+67366114 | None:intergenic |
| AACTTCAACCACTCCAAACA+AGG | 0.582534 | 7_2:+67363443 | None:intergenic |
| TGTGCTACATGCAATGCTGA+TGG | 0.584240 | 7_2:-67365824 | Msa1071020:CDS |
| ATGGAGCTCATATGAGCATG+TGG | 0.588921 | 7_2:-67367674 | Msa1071020:CDS |
| ATTACCCGTTGCAGTGCAAG+CGG | 0.589006 | 7_2:-67367082 | Msa1071020:intron |
| GAAATAAAGTCAAATTCAAG+TGG | 0.593642 | 7_2:-67363257 | Msa1071020:three_prime_UTR |
| TCAGGTTGTGCCGGGCGAGG+AGG | 0.593663 | 7_2:-67365854 | Msa1071020:intron |
| TCCTACAATATAGAAACTGA+AGG | 0.594984 | 7_2:+67363526 | None:intergenic |
| GAAATTGTACCTGATAGAAG+AGG | 0.599830 | 7_2:+67367847 | None:intergenic |
| AAGCCCCAACAAAATCTAGA+GGG | 0.599965 | 7_2:+67363470 | None:intergenic |
| GCTTATCAAGGCGGATATGG+AGG | 0.600674 | 7_2:-67367057 | Msa1071020:CDS |
| TTCCATCAATATTTCCACCA+GGG | 0.602904 | 7_2:+67366115 | None:intergenic |
| TGTGAAACGTGTAATGGAAG+TGG | 0.607659 | 7_2:-67365482 | Msa1071020:CDS |
| AGTTCAATTATGCAATACTC+AGG | 0.608227 | 7_2:-67363720 | Msa1071020:CDS |
| GAATCTTCCATGTTCGAGCA+GGG | 0.608319 | 7_2:+67366223 | None:intergenic |
| ACAGACTATTCCTCCTCGCC+CGG | 0.608323 | 7_2:+67365844 | None:intergenic |
| AAACCCCTTCCATAACAACT+AGG | 0.608898 | 7_2:+67365761 | None:intergenic |
| TTCTATCCTCCTGTTCATGG+GGG | 0.610681 | 7_2:-67367568 | Msa1071020:CDS |
| CGAGATCCACAAGTCGCACA+AGG | 0.611817 | 7_2:+67365518 | None:intergenic |
| CTATATTGTAGGAAATGACA+GGG | 0.624050 | 7_2:-67363516 | Msa1071020:CDS |
| CTCACAAATGACTCTTGCAG+TGG | 0.628837 | 7_2:+67363607 | None:intergenic |
| GCCAATGGATAATACAACAA+AGG | 0.632017 | 7_2:+67363316 | None:intergenic |
| TAATGTTTATGTTGGAACGC+TGG | 0.633236 | 7_2:-67366184 | Msa1071020:CDS |
| AAAGAGACAGAGCCATACCC+TGG | 0.641609 | 7_2:-67366132 | Msa1071020:CDS |
| AGAGACCAAATTATGGAGAA+CGG | 0.651764 | 7_2:+67367891 | None:intergenic |
| GAATTGGTTGGGAATCAGAG+TGG | 0.654854 | 7_2:-67367700 | Msa1071020:CDS |
| GAACCAGACCTGAATTCCGA+AGG | 0.656715 | 7_2:-67367023 | Msa1071020:intron |
| AAAGGCAGGAGTGCATTGGT+GGG | 0.657869 | 7_2:+67363697 | None:intergenic |
| CAAGCCCCAACAAAATCTAG+AGG | 0.660144 | 7_2:+67363469 | None:intergenic |
| AGTAAGTGCAACTAAAGGAG+CGG | 0.664827 | 7_2:-67363780 | Msa1071020:CDS |
| GGATTGCCGACGATGAGACA+TGG | 0.665410 | 7_2:+67363547 | None:intergenic |
| ACAGGAAGACACTTTCAACT+CGG | 0.667034 | 7_2:-67363805 | Msa1071020:intron |
| TGGAGCTCATATGAGCATGT+GGG | 0.669407 | 7_2:-67367673 | Msa1071020:CDS |
| GCGTCACCATGTCTCATCGT+CGG | 0.669689 | 7_2:-67363553 | Msa1071020:CDS |
| GAGACAGAGCCATACCCTGG+TGG | 0.678375 | 7_2:-67366129 | Msa1071020:CDS |
| ACAAGCCATGAATAATCAGA+CGG | 0.681138 | 7_2:+67363205 | None:intergenic |
| AGCCCCAACAAAATCTAGAG+GGG | 0.694268 | 7_2:+67363471 | None:intergenic |
| GAGCTGCTCATTGATCACGT+TGG | 0.698946 | 7_2:-67366270 | Msa1071020:CDS |
| CAAGCGGTTGCTTATCAAGG+CGG | 0.703834 | 7_2:-67367066 | Msa1071020:CDS |
| TCTTCCATGTTCGAGCAGGG+CGG | 0.712512 | 7_2:+67366226 | None:intergenic |
| GGATATGGAGGAGATTATGG+TGG | 0.714179 | 7_2:-67367045 | Msa1071020:CDS |
| TATTGTAGGAAATGACAGGG+AGG | 0.745630 | 7_2:-67363513 | Msa1071020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAGATTATTATTTTCA+AGG | - | chr7_2:67364700-67364719 | Msa1071020:intron | 10.0% |
| !!! | TTAAACATAAAAGTATTTTA+TGG | + | chr7_2:67365958-67365977 | None:intergenic | 10.0% |
| !!! | GTTATTTTTATATTTGTATT+TGG | - | chr7_2:67366427-67366446 | Msa1071020:intron | 10.0% |
| !! | TGGATTATAAAAAATAAGAT+GGG | + | chr7_2:67363175-67363194 | None:intergenic | 15.0% |
| !! | TTGGATTATAAAAAATAAGA+TGG | + | chr7_2:67363176-67363195 | None:intergenic | 15.0% |
| !!! | TTTAAAATGTTGTCAAATAT+CGG | - | chr7_2:67363756-67363775 | Msa1071020:CDS | 15.0% |
| !! | AATTCTAATCTAATTTGATT+GGG | + | chr7_2:67364499-67364518 | None:intergenic | 15.0% |
| !! | TAATTCTAATCTAATTTGAT+TGG | + | chr7_2:67364500-67364519 | None:intergenic | 15.0% |
| !! | ATTAGATTAGAATTAAGATT+AGG | - | chr7_2:67364505-67364524 | Msa1071020:intron | 15.0% |
| !!! | AAAGAACTTTTAATCATAAA+GGG | + | chr7_2:67364769-67364788 | None:intergenic | 15.0% |
| !!! | TAAAGAACTTTTAATCATAA+AGG | + | chr7_2:67364770-67364789 | None:intergenic | 15.0% |
| !!! | ATTAACATACCATTTTATAA+TGG | + | chr7_2:67365715-67365734 | None:intergenic | 15.0% |
| !! | TTATAAAATGGTATGTTAAT+TGG | - | chr7_2:67365715-67365734 | Msa1071020:intron | 15.0% |
| !! | ATATACATTCAAAATATCTT+TGG | - | chr7_2:67365987-67366006 | Msa1071020:intron | 15.0% |
| !! | AATAAATTAAACAATACAAG+AGG | + | chr7_2:67366504-67366523 | None:intergenic | 15.0% |
| !!! | TCATTAAGGAATTAGAATTT+TGG | + | chr7_2:67363195-67363214 | None:intergenic | 20.0% |
| !! | TTTAATCATGATTATGATTC+TGG | - | chr7_2:67363388-67363407 | Msa1071020:three_prime_UTR | 20.0% |
| !! | TTAATCATGATTATGATTCT+GGG | - | chr7_2:67363389-67363408 | Msa1071020:three_prime_UTR | 20.0% |
| !!! | CTTTTTTGAATTATGATGAT+TGG | - | chr7_2:67363670-67363689 | Msa1071020:CDS | 20.0% |
| !! | TCATTCTACAATGATATTTA+TGG | - | chr7_2:67364278-67364297 | Msa1071020:intron | 20.0% |
| !! | TGATCAATAATCTTATCAAA+TGG | - | chr7_2:67364812-67364831 | Msa1071020:intron | 20.0% |
| !!! | TTTCACAAATCAAATTTTCA+CGG | - | chr7_2:67365208-67365227 | Msa1071020:intron | 20.0% |
| !!! | AATAATTTCCAAGGTTTTAA+GGG | + | chr7_2:67365273-67365292 | None:intergenic | 20.0% |
| !!! | AAATAATTTCCAAGGTTTTA+AGG | + | chr7_2:67365274-67365293 | None:intergenic | 20.0% |
| !!! | ATAAAAGTATTTTATGGATG+GGG | + | chr7_2:67365952-67365971 | None:intergenic | 20.0% |
| !!! | CATAAAAGTATTTTATGGAT+GGG | + | chr7_2:67365953-67365972 | None:intergenic | 20.0% |
| !!! | ACATAAAAGTATTTTATGGA+TGG | + | chr7_2:67365954-67365973 | None:intergenic | 20.0% |
| !! | ATAGCATTCAATCATAATTA+AGG | + | chr7_2:67366057-67366076 | None:intergenic | 20.0% |
| !!! | ATAGTTTAATTTAACTAAGC+AGG | - | chr7_2:67366104-67366123 | Msa1071020:CDS | 20.0% |
| !!! | TAGTTTAATTTAACTAAGCA+GGG | - | chr7_2:67366105-67366124 | Msa1071020:CDS | 20.0% |
| !!! | AAGTGAAATATGTAGTTTTT+CGG | - | chr7_2:67366168-67366187 | Msa1071020:CDS | 20.0% |
| !! | TTTAAATAAAATATGGAGGT+CGG | + | chr7_2:67366281-67366300 | None:intergenic | 20.0% |
| !! | CCTATTTAAATAAAATATGG+AGG | + | chr7_2:67366285-67366304 | None:intergenic | 20.0% |
| !!! | CCTCCATATTTTATTTAAAT+AGG | - | chr7_2:67366282-67366301 | Msa1071020:CDS | 20.0% |
| !! | ACGCCTATTTAAATAAAATA+TGG | + | chr7_2:67366288-67366307 | None:intergenic | 20.0% |
| !!! | CATAAATAACACTGTTATTT+AGG | - | chr7_2:67366578-67366597 | Msa1071020:intron | 20.0% |
| !!! | CTTCTAAAAAAAAGTAACAA+AGG | - | chr7_2:67367084-67367103 | Msa1071020:intron | 20.0% |
| !! | TAAGAATAATATGATACTGT+AGG | + | chr7_2:67367264-67367283 | None:intergenic | 20.0% |
| !! | AAAAAAAGAATCAGCAAAAA+AGG | + | chr7_2:67367472-67367491 | None:intergenic | 20.0% |
| !!! | AATAACATAAGCATGTTTTT+TGG | - | chr7_2:67367789-67367808 | Msa1071020:intron | 20.0% |
| ! | AAAAAATAAGATGGGTCAAA+TGG | + | chr7_2:67363167-67363186 | None:intergenic | 25.0% |
| ! | TTGAGTTAACTTTGTCATTA+AGG | + | chr7_2:67363209-67363228 | None:intergenic | 25.0% |
| ! | ATTAGAACAAAGAAGTGAAT+TGG | - | chr7_2:67363432-67363451 | Msa1071020:exon | 25.0% |
| !!! | ACATTTTAAAAAGTGCAGAT+GGG | + | chr7_2:67363746-67363765 | None:intergenic | 25.0% |
| !!! | AACATTTTAAAAAGTGCAGA+TGG | + | chr7_2:67363747-67363766 | None:intergenic | 25.0% |
| ! | AACTTATTGCGTAACAATAT+CGG | + | chr7_2:67363819-67363838 | None:intergenic | 25.0% |
| ! | TACAAAATGTTGTGAAATAG+CGG | - | chr7_2:67363845-67363864 | Msa1071020:intron | 25.0% |
| ! | ACTGGATTTATGTTTGATTA+GGG | - | chr7_2:67363933-67363952 | Msa1071020:intron | 25.0% |
| ! | AAGTTAAGTAATCATACCTT+CGG | + | chr7_2:67364144-67364163 | None:intergenic | 25.0% |
| ! | TGATATTTATGGACCATAAT+AGG | - | chr7_2:67364289-67364308 | Msa1071020:intron | 25.0% |
| ! | GATATTTATGGACCATAATA+GGG | - | chr7_2:67364290-67364309 | Msa1071020:intron | 25.0% |
| ! | CTAATTTCATGATCTATTAC+TGG | + | chr7_2:67364687-67364706 | None:intergenic | 25.0% |
| ! | ATTATTGATCAATATAGTGC+TGG | + | chr7_2:67364803-67364822 | None:intergenic | 25.0% |
| ! | AATATTGATGGAAAGGATAA+AGG | - | chr7_2:67365043-67365062 | Msa1071020:intron | 25.0% |
| !!! | ATAATTTCCAAGGTTTTAAG+GGG | + | chr7_2:67365272-67365291 | None:intergenic | 25.0% |
| !! | AAACCTTGGAAATTATTTTC+AGG | - | chr7_2:67365276-67365295 | Msa1071020:intron | 25.0% |
| !! | TGATTTTCTTTATAATGTCC+AGG | + | chr7_2:67365354-67365373 | None:intergenic | 25.0% |
| ! | TGGACATTATAAAGAAAATC+AGG | - | chr7_2:67365353-67365372 | Msa1071020:intron | 25.0% |
| ! | TTCATTTGCTCATAAATAGA+AGG | - | chr7_2:67365448-67365467 | Msa1071020:CDS | 25.0% |
| ! | TTTGTCAAAAAGAAAGTTTG+AGG | + | chr7_2:67365820-67365839 | None:intergenic | 25.0% |
| ! | AACAACTACGTTAAATTTGT+GGG | + | chr7_2:67365847-67365866 | None:intergenic | 25.0% |
| ! | AAACAACTACGTTAAATTTG+TGG | + | chr7_2:67365848-67365867 | None:intergenic | 25.0% |
| ! | GTGATAGAGCTAATAAATAA+AGG | + | chr7_2:67366259-67366278 | None:intergenic | 25.0% |
| ! | TGTATACATTCATCAAAACA+AGG | - | chr7_2:67366313-67366332 | Msa1071020:intron | 25.0% |
| ! | GTATACATTCATCAAAACAA+GGG | - | chr7_2:67366314-67366333 | Msa1071020:intron | 25.0% |
| ! | ACTTTGAACAATAGATACAT+AGG | - | chr7_2:67366338-67366357 | Msa1071020:intron | 25.0% |
| ! | TAGATACATAGGTATTAAGA+AGG | - | chr7_2:67366349-67366368 | Msa1071020:intron | 25.0% |
| ! | AGATACATAGGTATTAAGAA+GGG | - | chr7_2:67366350-67366369 | Msa1071020:intron | 25.0% |
| ! | TGTTGACATATGTAGAAAAA+GGG | + | chr7_2:67366540-67366559 | None:intergenic | 25.0% |
| ! | TTGTTGACATATGTAGAAAA+AGG | + | chr7_2:67366541-67366560 | None:intergenic | 25.0% |
| !!! | ACAGTGTTATTTATGCTTTT+GGG | + | chr7_2:67366573-67366592 | None:intergenic | 25.0% |
| !!! | AACAGTGTTATTTATGCTTT+TGG | + | chr7_2:67366574-67366593 | None:intergenic | 25.0% |
| ! | TAAAAAGATGTGAGTGTTTA+AGG | - | chr7_2:67366665-67366684 | Msa1071020:intron | 25.0% |
| ! | CACAAGATAAGAAAAACTTT+AGG | - | chr7_2:67366701-67366720 | Msa1071020:intron | 25.0% |
| ! | ATTTGACATTATAGAGTCAA+TGG | - | chr7_2:67366870-67366889 | Msa1071020:intron | 25.0% |
| ! | GAAATAAAGTCAAATTCAAG+TGG | - | chr7_2:67367891-67367910 | Msa1071020:five_prime_UTR | 25.0% |
| TTTAGACAGAGACCAAATTA+TGG | + | chr7_2:67363267-67363286 | None:intergenic | 30.0% | |
| AACAAAGAAGTGAATTGGTT+GGG | - | chr7_2:67363437-67363456 | Msa1071020:exon | 30.0% | |
| GACTGGATTTATGTTTGATT+AGG | - | chr7_2:67363932-67363951 | Msa1071020:intron | 30.0% | |
| CTGGATTTATGTTTGATTAG+GGG | - | chr7_2:67363934-67363953 | Msa1071020:intron | 30.0% | |
| TGGATTTATGTTTGATTAGG+GGG | - | chr7_2:67363935-67363954 | Msa1071020:intron | 30.0% | |
| ! | CAATGTCTTTTGTAAGTATG+AGG | - | chr7_2:67363979-67363998 | Msa1071020:intron | 30.0% |
| ! | CATGATGGTATCTAATTTTG+TGG | - | chr7_2:67364222-67364241 | Msa1071020:intron | 30.0% |
| !! | TCTGAAAGAAGTATTAGTTG+TGG | - | chr7_2:67364253-67364272 | Msa1071020:intron | 30.0% |
| CCAAAGTGAAATTAAGAACA+GGG | + | chr7_2:67364392-67364411 | None:intergenic | 30.0% | |
| ACCAAAGTGAAATTAAGAAC+AGG | + | chr7_2:67364393-67364412 | None:intergenic | 30.0% | |
| TGAGCAGAAGATTATATTTG+AGG | - | chr7_2:67364460-67364479 | Msa1071020:intron | 30.0% | |
| ! | CTGGTTATTATTTGAAGTGT+TGG | - | chr7_2:67364564-67364583 | Msa1071020:intron | 30.0% |
| !! | ATTATTTTCAAGGCTTGTTC+TGG | - | chr7_2:67364710-67364729 | Msa1071020:intron | 30.0% |
| AAATGGCTAATCCACTTATA+GGG | - | chr7_2:67364829-67364848 | Msa1071020:intron | 30.0% | |
| GAAGACTGTAATGTTTATGT+TGG | - | chr7_2:67364956-67364975 | Msa1071020:intron | 30.0% | |
| TGGATACGTTTATAGAAGAA+AGG | - | chr7_2:67364984-67365003 | Msa1071020:intron | 30.0% | |
| GGATACGTTTATAGAAGAAA+GGG | - | chr7_2:67364985-67365004 | Msa1071020:intron | 30.0% | |
| TGTAGGGTACAAATAGAAAA+GGG | + | chr7_2:67365111-67365130 | None:intergenic | 30.0% | |
| ! | TTTTCTATTTGTACCCTACA+GGG | - | chr7_2:67365111-67365130 | Msa1071020:intron | 30.0% |
| TTCTCAATAACTTCAGAATG+AGG | + | chr7_2:67365154-67365173 | None:intergenic | 30.0% | |
| !!! | TAATTTCCAAGGTTTTAAGG+GGG | + | chr7_2:67365271-67365290 | None:intergenic | 30.0% |
| CAACCTGAAAATAATTTCCA+AGG | + | chr7_2:67365282-67365301 | None:intergenic | 30.0% | |
| !!! | AAATTATTTTCAGGTTGTGC+CGG | - | chr7_2:67365285-67365304 | Msa1071020:intron | 30.0% |
| TGTGTGAAATGTAATGGTAA+AGG | - | chr7_2:67365600-67365619 | Msa1071020:intron | 30.0% | |
| GTGTGAAATGTAATGGTAAA+GGG | - | chr7_2:67365601-67365620 | Msa1071020:intron | 30.0% | |
| GCAATGTAGCCATTATAAAA+TGG | - | chr7_2:67365703-67365722 | Msa1071020:intron | 30.0% | |
| TTAAAAAACACATGCTCCAA+TGG | - | chr7_2:67365775-67365794 | Msa1071020:CDS | 30.0% | |
| AAATTTATTCCAGAGTCCAT+TGG | + | chr7_2:67365794-67365813 | None:intergenic | 30.0% | |
| GAATGATCATATGCTTTAGT+TGG | - | chr7_2:67365904-67365923 | Msa1071020:intron | 30.0% | |
| CAAATAGTATAAGTTTCGTC+AGG | + | chr7_2:67366207-67366226 | None:intergenic | 30.0% | |
| GAGAATGATCTAAACCTAAT+GGG | + | chr7_2:67366466-67366485 | None:intergenic | 30.0% | |
| AGAGAATGATCTAAACCTAA+TGG | + | chr7_2:67366467-67366486 | None:intergenic | 30.0% | |
| AAAGCTGATGTTGATATCAA+AGG | - | chr7_2:67366610-67366629 | Msa1071020:intron | 30.0% | |
| ATAAAATGTGATGTATGTCG+TGG | - | chr7_2:67366639-67366658 | Msa1071020:intron | 30.0% | |
| ATCAAGAAAAGTTGCAATAG+AGG | - | chr7_2:67366796-67366815 | Msa1071020:intron | 30.0% | |
| AATATTCTGAATCTGCACAA+CGG | + | chr7_2:67367146-67367165 | None:intergenic | 30.0% | |
| ATTGCATAATTGAACTCCTT+TGG | + | chr7_2:67367424-67367443 | None:intergenic | 30.0% | |
| AGTTCAATTATGCAATACTC+AGG | - | chr7_2:67367428-67367447 | Msa1071020:intron | 30.0% | |
| TCCTTCAGTTTCTATATTGT+AGG | - | chr7_2:67367621-67367640 | Msa1071020:CDS | 30.0% | |
| TCCTACAATATAGAAACTGA+AGG | + | chr7_2:67367625-67367644 | None:intergenic | 30.0% | |
| TCTATATTGTAGGAAATGAC+AGG | - | chr7_2:67367631-67367650 | Msa1071020:CDS | 30.0% | |
| CTATATTGTAGGAAATGACA+GGG | - | chr7_2:67367632-67367651 | Msa1071020:CDS | 30.0% | |
| !!! | TAAGCATGTTTTTTGGTTTG+AGG | - | chr7_2:67367796-67367815 | Msa1071020:intron | 30.0% |
| !!! | AAGCATGTTTTTTGGTTTGA+GGG | - | chr7_2:67367797-67367816 | Msa1071020:intron | 30.0% |
| ! | ACCTTTGTTGTATTATCCAT+TGG | - | chr7_2:67367831-67367850 | Msa1071020:intron | 30.0% |
| GAACGGTGCATTATATATGT+GGG | + | chr7_2:67363243-67363262 | None:intergenic | 35.0% | |
| AGAACGGTGCATTATATATG+TGG | + | chr7_2:67363244-67363263 | None:intergenic | 35.0% | |
| AGAGACCAAATTATGGAGAA+CGG | + | chr7_2:67363260-67363279 | None:intergenic | 35.0% | |
| GAAATTGTACCTGATAGAAG+AGG | + | chr7_2:67363304-67363323 | None:intergenic | 35.0% | |
| GAACAAAGAAGTGAATTGGT+TGG | - | chr7_2:67363436-67363455 | Msa1071020:exon | 35.0% | |
| !!! | CAGTTTTTTTGAATTCCGCT+AGG | + | chr7_2:67363885-67363904 | None:intergenic | 35.0% |
| TCTTCATAATCGCATATTGC+GGG | + | chr7_2:67363914-67363933 | None:intergenic | 35.0% | |
| GTCTTCATAATCGCATATTG+CGG | + | chr7_2:67363915-67363934 | None:intergenic | 35.0% | |
| CAATATGCGATTATGAAGAC+TGG | - | chr7_2:67363915-67363934 | Msa1071020:intron | 35.0% | |
| ! | TGCAACGGGTAATGTATTTT+AGG | + | chr7_2:67364059-67364078 | None:intergenic | 35.0% |
| TAATCATACCTTCGGAATTC+AGG | + | chr7_2:67364136-67364155 | None:intergenic | 35.0% | |
| AATTAACGTCTGCCCTATTA+TGG | + | chr7_2:67364305-67364324 | None:intergenic | 35.0% | |
| CCCTGTTCTTAATTTCACTT+TGG | - | chr7_2:67364389-67364408 | Msa1071020:intron | 35.0% | |
| ! | CTCACTTCTTTTACCGATAA+AGG | + | chr7_2:67364419-67364438 | None:intergenic | 35.0% |
| GCAGAAGATTATATTTGAGG+CGG | - | chr7_2:67364463-67364482 | Msa1071020:intron | 35.0% | |
| AGATCAAGACATTATCAAGC+TGG | - | chr7_2:67364545-67364564 | Msa1071020:intron | 35.0% | |
| GATAAACTTCTAATCGTGTG+TGG | - | chr7_2:67364629-67364648 | Msa1071020:intron | 35.0% | |
| CAAATGGCTAATCCACTTAT+AGG | - | chr7_2:67364828-67364847 | Msa1071020:intron | 35.0% | |
| TAATGTTTATGTTGGAACGC+TGG | - | chr7_2:67364964-67364983 | Msa1071020:intron | 35.0% | |
| TTCCATCAATATTTCCACCA+GGG | + | chr7_2:67365036-67365055 | None:intergenic | 35.0% | |
| TTTCCATCAATATTTCCACC+AGG | + | chr7_2:67365037-67365056 | None:intergenic | 35.0% | |
| TGGTGGAAATATTGATGGAA+AGG | - | chr7_2:67365036-67365055 | Msa1071020:intron | 35.0% | |
| AATTCCCAAATACCAAGTTC+AGG | + | chr7_2:67365070-67365089 | None:intergenic | 35.0% | |
| TGAACTTGGTATTTGGGAAT+TGG | - | chr7_2:67365069-67365088 | Msa1071020:intron | 35.0% | |
| GAACTTGGTATTTGGGAATT+GGG | - | chr7_2:67365070-67365089 | Msa1071020:intron | 35.0% | |
| CTGTAGGGTACAAATAGAAA+AGG | + | chr7_2:67365112-67365131 | None:intergenic | 35.0% | |
| ! | CTTTTCTATTTGTACCCTAC+AGG | - | chr7_2:67365110-67365129 | Msa1071020:intron | 35.0% |
| GAAGTTATTGAGAAATGCTC+AGG | - | chr7_2:67365160-67365179 | Msa1071020:intron | 35.0% | |
| AGAAATGCTCAGGTAAATTC+TGG | - | chr7_2:67365170-67365189 | Msa1071020:intron | 35.0% | |
| !!! | AATTATTTTCAGGTTGTGCC+GGG | - | chr7_2:67365286-67365305 | Msa1071020:intron | 35.0% |
| GGTTTGATTGCTCATAAAGA+TGG | - | chr7_2:67365405-67365424 | Msa1071020:intron | 35.0% | |
| CATCTGCAAGAACATGTAAA+TGG | + | chr7_2:67365582-67365601 | None:intergenic | 35.0% | |
| TGCAGATGTGTGAAATGTAA+TGG | - | chr7_2:67365594-67365613 | Msa1071020:intron | 35.0% | |
| CTTAACTGTGAAACGTGTAA+TGG | - | chr7_2:67365660-67365679 | Msa1071020:intron | 35.0% | |
| AATCTTGCTACCAGACTTAA+AGG | + | chr7_2:67366131-67366150 | None:intergenic | 35.0% | |
| AAGGATACATCATACATGCA+AGG | + | chr7_2:67366240-67366259 | None:intergenic | 35.0% | |
| AGCCTTAAATTCTTCGTTGA+TGG | - | chr7_2:67366727-67366746 | Msa1071020:intron | 35.0% | |
| GCCTTAAATTCTTCGTTGAT+GGG | - | chr7_2:67366728-67366747 | Msa1071020:intron | 35.0% | |
| TCCCATCAACGAAGAATTTA+AGG | + | chr7_2:67366732-67366751 | None:intergenic | 35.0% | |
| TGCAATAGAGGTTGCTAATA+AGG | - | chr7_2:67366808-67366827 | Msa1071020:intron | 35.0% | |
| ! | GTTTGATGATACTTGTGATG+CGG | - | chr7_2:67366919-67366938 | Msa1071020:intron | 35.0% |
| CTCCAAATAGTTAGGAACAA+AGG | - | chr7_2:67366945-67366964 | Msa1071020:intron | 35.0% | |
| AGCCTTTGTTCCTAACTATT+TGG | + | chr7_2:67366950-67366969 | None:intergenic | 35.0% | |
| CTAAATTAGCCCACTCAAAT+TGG | + | chr7_2:67367064-67367083 | None:intergenic | 35.0% | |
| GATCTATGGAAAACTTCATC+TGG | + | chr7_2:67367402-67367421 | None:intergenic | 35.0% | |
| ! | GAAGTTTTCCATAGATCCAA+AGG | - | chr7_2:67367405-67367424 | Msa1071020:intron | 35.0% |
| ATTGAACTCCTTTGGATCTA+TGG | + | chr7_2:67367416-67367435 | None:intergenic | 35.0% | |
| AAAGAATCAGCAAAAAAGGC+AGG | + | chr7_2:67367468-67367487 | None:intergenic | 35.0% | |
| ACATACAATCTCAGTTGTTC+CGG | - | chr7_2:67367566-67367585 | Msa1071020:CDS | 35.0% | |
| ! | ATTACCCCTCTAGATTTTGT+TGG | - | chr7_2:67367673-67367692 | Msa1071020:CDS | 35.0% |
| ! | TTACCCCTCTAGATTTTGTT+GGG | - | chr7_2:67367674-67367693 | Msa1071020:CDS | 35.0% |
| !!! | AGCATGTTTTTTGGTTTGAG+GGG | - | chr7_2:67367798-67367817 | Msa1071020:intron | 35.0% |
| GCCAATGGATAATACAACAA+AGG | + | chr7_2:67367835-67367854 | None:intergenic | 35.0% | |
| !! | GTATTATCCATTGGCTTGTA+AGG | - | chr7_2:67367840-67367859 | Msa1071020:intron | 35.0% |
| CATGAGATTTAATCATGCAC+TGG | + | chr7_2:67367919-67367938 | None:intergenic | 35.0% | |
| ACAAGCCATGAATAATCAGA+CGG | + | chr7_2:67367946-67367965 | None:intergenic | 35.0% | |
| ATGCACCGTTCTCCATAATT+TGG | - | chr7_2:67363252-67363271 | Msa1071020:three_prime_UTR | 40.0% | |
| TAGAAGAGGTTGTTCCATGA+TGG | + | chr7_2:67363290-67363309 | None:intergenic | 40.0% | |
| ATGGAACAACCTCTTCTATC+AGG | - | chr7_2:67363292-67363311 | Msa1071020:three_prime_UTR | 40.0% | |
| TTGGGAATCAGAGTGGAAAA+TGG | - | chr7_2:67363455-67363474 | Msa1071020:CDS | 40.0% | |
| TCAACACTTACACAAGTTCC+AGG | + | chr7_2:67363520-67363539 | None:intergenic | 40.0% | |
| GTTTCTATCCTCCTGTTCAT+GGG | - | chr7_2:67363578-67363597 | Msa1071020:CDS | 40.0% | |
| TTTCTATCCTCCTGTTCATG+GGG | - | chr7_2:67363579-67363598 | Msa1071020:CDS | 40.0% | |
| GAACAAAAGAACATACCAGC+AGG | + | chr7_2:67363631-67363650 | None:intergenic | 40.0% | |
| TGAAACTAGACTGTGCATGA+TGG | - | chr7_2:67364207-67364226 | Msa1071020:intron | 40.0% | |
| TCACTTTGGTCGTCCTTTAT+CGG | - | chr7_2:67364403-67364422 | Msa1071020:intron | 40.0% | |
| ! | ATATTTGAGGCGGAAAGAAC+AGG | - | chr7_2:67364473-67364492 | Msa1071020:intron | 40.0% |
| ATCCACTTATAGGGAAACCT+TGG | - | chr7_2:67364838-67364857 | Msa1071020:intron | 40.0% | |
| ATCCAAGGTTTCCCTATAAG+TGG | + | chr7_2:67364843-67364862 | None:intergenic | 40.0% | |
| TCGTATCTCTACTTCATCCA+AGG | + | chr7_2:67364858-67364877 | None:intergenic | 40.0% | |
| TCAATATTTCCACCAGGGTA+TGG | + | chr7_2:67365031-67365050 | None:intergenic | 40.0% | |
| TACCCTGGTGGAAATATTGA+TGG | - | chr7_2:67365031-67365050 | Msa1071020:intron | 40.0% | |
| AAGGATAAAGGACCTGAACT+TGG | - | chr7_2:67365055-67365074 | Msa1071020:intron | 40.0% | |
| AAGGACCTGAACTTGGTATT+TGG | - | chr7_2:67365062-67365081 | Msa1071020:intron | 40.0% | |
| AGGACCTGAACTTGGTATTT+GGG | - | chr7_2:67365063-67365082 | Msa1071020:intron | 40.0% | |
| GTATTTGGGAATTGGGTCTA+AGG | - | chr7_2:67365077-67365096 | Msa1071020:intron | 40.0% | |
| ACTCAGTGTCCTAGTTGTTA+TGG | - | chr7_2:67365378-67365397 | Msa1071020:intron | 40.0% | |
| AGTGTCCTAGTTGTTATGGA+AGG | - | chr7_2:67365382-67365401 | Msa1071020:intron | 40.0% | |
| GTGTCCTAGTTGTTATGGAA+GGG | - | chr7_2:67365383-67365402 | Msa1071020:intron | 40.0% | |
| TGTCCTAGTTGTTATGGAAG+GGG | - | chr7_2:67365384-67365403 | Msa1071020:intron | 40.0% | |
| AAACCCCTTCCATAACAACT+AGG | + | chr7_2:67365390-67365409 | None:intergenic | 40.0% | |
| CAAATGTTGAATTCAAGCCG+AGG | - | chr7_2:67365493-67365512 | Msa1071020:CDS | 40.0% | |
| !!! | CTGCATTTCTTTTCTGAAGC+TGG | - | chr7_2:67365529-67365548 | Msa1071020:CDS | 40.0% |
| ! | TGTGAAACGTGTAATGGAAG+TGG | - | chr7_2:67365666-67365685 | Msa1071020:intron | 40.0% |
| !! | ACCTAATGGGCTTGCTTAAT+GGG | + | chr7_2:67366453-67366472 | None:intergenic | 40.0% |
| !! | AACCTAATGGGCTTGCTTAA+TGG | + | chr7_2:67366454-67366473 | None:intergenic | 40.0% |
| ! | AAAGGCTTTTGTAACCCACT+TGG | - | chr7_2:67366963-67366982 | Msa1071020:intron | 40.0% |
| ! | AAGGCTTTTGTAACCCACTT+GGG | - | chr7_2:67366964-67366983 | Msa1071020:intron | 40.0% |
| ACAGGAAGACACTTTCAACT+CGG | - | chr7_2:67367343-67367362 | Msa1071020:intron | 40.0% | |
| CGGAAAGTAAGTGCAACTAA+AGG | - | chr7_2:67367363-67367382 | Msa1071020:intron | 40.0% | |
| AGTAAGTGCAACTAAAGGAG+CGG | - | chr7_2:67367368-67367387 | Msa1071020:intron | 40.0% | |
| TATTGTAGGAAATGACAGGG+AGG | - | chr7_2:67367635-67367654 | Msa1071020:CDS | 40.0% | |
| TGACAGGGAGGTTTACTTAA+AGG | - | chr7_2:67367647-67367666 | Msa1071020:CDS | 40.0% | |
| ! | TACCCCTCTAGATTTTGTTG+GGG | - | chr7_2:67367675-67367694 | Msa1071020:CDS | 40.0% |
| AAGCCCCAACAAAATCTAGA+GGG | + | chr7_2:67367681-67367700 | None:intergenic | 40.0% | |
| AACTTCAACCACTCCAAACA+AGG | + | chr7_2:67367708-67367727 | None:intergenic | 40.0% | |
| GCTTGTAAGGACTACAGTTA+TGG | - | chr7_2:67367853-67367872 | Msa1071020:intron | 40.0% | |
| GTTGTCCGTCTGATTATTCA+TGG | - | chr7_2:67367938-67367957 | Msa1071020:five_prime_UTR | 40.0% | |
| GGTCTCTGTCTAAACCATCA+TGG | - | chr7_2:67363273-67363292 | Msa1071020:three_prime_UTR | 45.0% | |
| GAATTGGTTGGGAATCAGAG+TGG | - | chr7_2:67363448-67363467 | Msa1071020:CDS | 45.0% | |
| ATGGAGCTCATATGAGCATG+TGG | - | chr7_2:67363474-67363493 | Msa1071020:CDS | 45.0% | |
| TGGAGCTCATATGAGCATGT+GGG | - | chr7_2:67363475-67363494 | Msa1071020:CDS | 45.0% | |
| AAACCTGCAGAAGAAGGAAC+AGG | + | chr7_2:67363562-67363581 | None:intergenic | 45.0% | |
| GGATAGAAACCTGCAGAAGA+AGG | + | chr7_2:67363568-67363587 | None:intergenic | 45.0% | |
| GGTTTCTATCCTCCTGTTCA+TGG | - | chr7_2:67363577-67363596 | Msa1071020:CDS | 45.0% | |
| TTCTATCCTCCTGTTCATGG+GGG | - | chr7_2:67363580-67363599 | Msa1071020:CDS | 45.0% | |
| AAGAACATACCAGCAGGATC+AGG | + | chr7_2:67363625-67363644 | None:intergenic | 45.0% | |
| GTTGCTTATCAAGGCGGATA+TGG | - | chr7_2:67364088-67364107 | Msa1071020:intron | 45.0% | |
| GGATATGGAGGAGATTATGG+TGG | - | chr7_2:67364103-67364122 | Msa1071020:intron | 45.0% | |
| ATACCTTCGGAATTCAGGTC+TGG | + | chr7_2:67364131-67364150 | None:intergenic | 45.0% | |
| GCTACTCTTCACTTCGTAGT+AGG | - | chr7_2:67364599-67364618 | Msa1071020:intron | 45.0% | |
| ACGTTGGTCATCGTTGTTGT+TGG | - | chr7_2:67364894-67364913 | Msa1071020:intron | 45.0% | |
| ! | CGTTGGTCATCGTTGTTGTT+GGG | - | chr7_2:67364895-67364914 | Msa1071020:intron | 45.0% |
| ! | GTTGGTCATCGTTGTTGTTG+GGG | - | chr7_2:67364896-67364915 | Msa1071020:intron | 45.0% |
| GAATCTTCCATGTTCGAGCA+GGG | + | chr7_2:67364928-67364947 | None:intergenic | 45.0% | |
| TGAATCTTCCATGTTCGAGC+AGG | + | chr7_2:67364929-67364948 | None:intergenic | 45.0% | |
| TGCTCGAACATGGAAGATTC+AGG | - | chr7_2:67364928-67364947 | Msa1071020:intron | 45.0% | |
| ! | TTTTCACGCACTTCCCTGTA+GGG | + | chr7_2:67365127-67365146 | None:intergenic | 45.0% |
| TTACCTCCCCCTTAAAACCT+TGG | - | chr7_2:67365262-67365281 | Msa1071020:intron | 45.0% | |
| !!! | TTTCCAAGGTTTTAAGGGGG+AGG | + | chr7_2:67365268-67365287 | None:intergenic | 45.0% |
| TGTGCTACATGCAATGCTGA+TGG | - | chr7_2:67365324-67365343 | Msa1071020:intron | 45.0% | |
| GATGGGATAGTTGTCTGACA+TGG | - | chr7_2:67366745-67366764 | Msa1071020:intron | 45.0% | |
| TGCGGTGACTCCAAATAGTT+AGG | - | chr7_2:67366937-67366956 | Msa1071020:intron | 45.0% | |
| ! | CTTTTGTAACCCACTTGGGT+TGG | - | chr7_2:67366968-67366987 | Msa1071020:intron | 45.0% |
| GTGGTATTGTCTTGGGACTT+GGG | - | chr7_2:67366995-67367014 | Msa1071020:intron | 45.0% | |
| GAATCAAACCTGAGACCTTG+AGG | + | chr7_2:67367032-67367051 | None:intergenic | 45.0% | |
| ! | ATGTGTGTGTGTGTGTTGAC+AGG | - | chr7_2:67367325-67367344 | Msa1071020:intron | 45.0% |
| ! | CAAAAAAGGCAGGAGTGCAT+TGG | + | chr7_2:67367458-67367477 | None:intergenic | 45.0% |
| CTCACAAATGACTCTTGCAG+TGG | + | chr7_2:67367544-67367563 | None:intergenic | 45.0% | |
| AGCCCCAACAAAATCTAGAG+GGG | + | chr7_2:67367680-67367699 | None:intergenic | 45.0% | |
| CAAGCCCCAACAAAATCTAG+AGG | + | chr7_2:67367682-67367701 | None:intergenic | 45.0% | |
| CTGTAGTCCTTACAAGCCAA+TGG | + | chr7_2:67367850-67367869 | None:intergenic | 45.0% | |
| TATGAGCATGTGGGTCGAAC+AGG | - | chr7_2:67363484-67363503 | Msa1071020:CDS | 50.0% | |
| CGAACAGGTTCTGCATATCC+TGG | - | chr7_2:67363499-67363518 | Msa1071020:CDS | 50.0% | |
| GCAGATGGGTCAACGTTTAC+AGG | + | chr7_2:67363732-67363751 | None:intergenic | 50.0% | |
| GCTGTAGCATAGTAGCCTAG+CGG | - | chr7_2:67363867-67363886 | Msa1071020:intron | 50.0% | |
| ATTACCCGTTGCAGTGCAAG+CGG | - | chr7_2:67364066-67364085 | Msa1071020:intron | 50.0% | |
| GTGCAAGCGGTTGCTTATCA+AGG | - | chr7_2:67364079-67364098 | Msa1071020:intron | 50.0% | |
| CAAGCGGTTGCTTATCAAGG+CGG | - | chr7_2:67364082-67364101 | Msa1071020:intron | 50.0% | |
| GCTTATCAAGGCGGATATGG+AGG | - | chr7_2:67364091-67364110 | Msa1071020:intron | 50.0% | |
| GGCGGATATGGAGGAGATTA+TGG | - | chr7_2:67364100-67364119 | Msa1071020:intron | 50.0% | |
| GAACCAGACCTGAATTCCGA+AGG | - | chr7_2:67364125-67364144 | Msa1071020:intron | 50.0% | |
| GAGCTGCTCATTGATCACGT+TGG | - | chr7_2:67364878-67364897 | Msa1071020:intron | 50.0% | |
| AAAGAGACAGAGCCATACCC+TGG | - | chr7_2:67365016-67365035 | Msa1071020:intron | 50.0% | |
| ! | CTTTTCACGCACTTCCCTGT+AGG | + | chr7_2:67365128-67365147 | None:intergenic | 50.0% |
| TGCAATGCTGATGGAGAACC+TGG | - | chr7_2:67365333-67365352 | Msa1071020:intron | 50.0% | |
| CAAGCCGAGGTCAAATGTCT+AGG | - | chr7_2:67365506-67365525 | Msa1071020:CDS | 50.0% | |
| GCAGCCTAGACATTTGACCT+CGG | + | chr7_2:67365513-67365532 | None:intergenic | 50.0% | |
| AAGCTTCCTTGTGCGACTTG+TGG | - | chr7_2:67365624-67365643 | Msa1071020:intron | 50.0% | |
| ! | ACACATGCTCCAATGGACTC+TGG | - | chr7_2:67365782-67365801 | Msa1071020:CDS | 50.0% |
| CTAAGCAGGGCCTTTAAGTC+TGG | - | chr7_2:67366118-67366137 | Msa1071020:CDS | 50.0% | |
| GCCCATTAAGCAAGCCCATT+AGG | - | chr7_2:67366449-67366468 | Msa1071020:intron | 50.0% | |
| TTGGCCTGGTGGTATTGTCT+TGG | - | chr7_2:67366987-67367006 | Msa1071020:intron | 50.0% | |
| TGGCCTGGTGGTATTGTCTT+GGG | - | chr7_2:67366988-67367007 | Msa1071020:intron | 50.0% | |
| AGTCCCAAGACAATACCACC+AGG | + | chr7_2:67366994-67367013 | None:intergenic | 50.0% | |
| GGTGGTATTGTCTTGGGACT+TGG | - | chr7_2:67366994-67367013 | Msa1071020:intron | 50.0% | |
| TCAAACCTGAGACCTTGAGG+AGG | + | chr7_2:67367029-67367048 | None:intergenic | 50.0% | |
| GTCTCAGGTTTGATTCTCCC+CGG | - | chr7_2:67367036-67367055 | Msa1071020:CDS | 50.0% | |
| ! | AAAGGCAGGAGTGCATTGGT+GGG | + | chr7_2:67367454-67367473 | None:intergenic | 50.0% |
| ! | AAAAGGCAGGAGTGCATTGG+TGG | + | chr7_2:67367455-67367474 | None:intergenic | 50.0% |
| CAAATGACTCTTGCAGTGGC+AGG | + | chr7_2:67367540-67367559 | None:intergenic | 50.0% | |
| TTGGGGCTTGTGTCCTTGTT+TGG | - | chr7_2:67367692-67367711 | Msa1071020:CDS | 50.0% | |
| ! | GCTTGTGTCCTTGTTTGGAG+TGG | - | chr7_2:67367697-67367716 | Msa1071020:CDS | 50.0% |
| GCTCCTGTTCCTTCTTCTGC+AGG | - | chr7_2:67363556-67363575 | Msa1071020:CDS | 55.0% | |
| TCCTCCTGTTCATGGGGGTT+TGG | - | chr7_2:67363585-67363604 | Msa1071020:CDS | 55.0% | |
| ACCAAACCCCCATGAACAGG+AGG | + | chr7_2:67363589-67363608 | None:intergenic | 55.0% | |
| CCAACCAAACCCCCATGAAC+AGG | + | chr7_2:67363592-67363611 | None:intergenic | 55.0% | |
| ! | CCTGTTCATGGGGGTTTGGT+TGG | - | chr7_2:67363589-67363608 | Msa1071020:CDS | 55.0% |
| TCATCTGAGCCTGATCCTGC+TGG | - | chr7_2:67363613-67363632 | Msa1071020:CDS | 55.0% | |
| AGCAACCGCTTGCACTGCAA+CGG | + | chr7_2:67364074-67364093 | None:intergenic | 55.0% | |
| TCTTCCATGTTCGAGCAGGG+CGG | + | chr7_2:67364925-67364944 | None:intergenic | 55.0% | |
| ACAGACTATTCCTCCTCGCC+CGG | + | chr7_2:67365307-67365326 | None:intergenic | 55.0% | |
| CGAGATCCACAAGTCGCACA+AGG | + | chr7_2:67365633-67365652 | None:intergenic | 55.0% | |
| TGTGCGACTTGTGGATCTCG+TGG | - | chr7_2:67365633-67365652 | Msa1071020:intron | 55.0% | |
| TAGCCCACTCAAATTGGCGC+CGG | + | chr7_2:67367058-67367077 | None:intergenic | 55.0% | |
| ! | GACATGGTGACGCGAGTTAC+CGG | + | chr7_2:67367588-67367607 | None:intergenic | 55.0% |
| GCGTCACCATGTCTCATCGT+CGG | - | chr7_2:67367595-67367614 | Msa1071020:CDS | 55.0% | |
| GGATTGCCGACGATGAGACA+TGG | + | chr7_2:67367604-67367623 | None:intergenic | 55.0% | |
| GCAACCGCTTGCACTGCAAC+GGG | + | chr7_2:67364073-67364092 | None:intergenic | 60.0% | |
| GAGACAGAGCCATACCCTGG+TGG | - | chr7_2:67365019-67365038 | Msa1071020:intron | 60.0% | |
| !!! | TTTTCAGGTTGTGCCGGGCG+AGG | - | chr7_2:67365291-67365310 | Msa1071020:intron | 60.0% |
| !! | GTAACCCACTTGGGTTGGCC+TGG | - | chr7_2:67366973-67366992 | Msa1071020:intron | 60.0% |
| ACCACCAGGCCAACCCAAGT+GGG | + | chr7_2:67366980-67366999 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACCCAAG+TGG | + | chr7_2:67366981-67367000 | None:intergenic | 60.0% | |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | - | chr7_2:67367014-67367033 | Msa1071020:intron | 60.0% |
| GTGCTCCTCCTCAAGGTCTC+AGG | - | chr7_2:67367021-67367040 | Msa1071020:intron | 60.0% | |
| TCCCCGGCGCCAATTTGAGT+GGG | - | chr7_2:67367052-67367071 | Msa1071020:CDS | 60.0% | |
| AGCCCACTCAAATTGGCGCC+GGG | + | chr7_2:67367057-67367076 | None:intergenic | 60.0% | |
| GTAGCCGCCCTGCTCGAACA+TGG | - | chr7_2:67364918-67364937 | Msa1071020:intron | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTGG+TGG | - | chr7_2:67366976-67366995 | Msa1071020:intron | 65.0% |
| CTCCCCGGCGCCAATTTGAG+TGG | - | chr7_2:67367051-67367070 | Msa1071020:CDS | 65.0% | |
| GCCCACTCAAATTGGCGCCG+GGG | + | chr7_2:67367056-67367075 | None:intergenic | 65.0% | |
| ! | TCAGGTTGTGCCGGGCGAGG+AGG | - | chr7_2:67365294-67365313 | Msa1071020:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 67363139 | 67368031 | 67363139 | ID=Msa1071020;Name=Msa1071020 |
| chr7_2 | mRNA | 67363139 | 67368031 | 67363139 | ID=Msa1071020-mRNA-1;Parent=Msa1071020;Name=Msa1071020-mRNA-1;_AED=0.09;_eAED=0.09;_QI=123|1|1|1|0.85|0.75|8|300|423 |
| chr7_2 | exon | 67363139 | 67363823 | 67363139 | ID=Msa1071020-mRNA-1:exon:14589;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67365446 | 67365571 | 67365446 | ID=Msa1071020-mRNA-1:exon:14588;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67365731 | 67365872 | 67365731 | ID=Msa1071020-mRNA-1:exon:14587;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67365989 | 67366320 | 67365989 | ID=Msa1071020-mRNA-1:exon:14586;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67367024 | 67367090 | 67367024 | ID=Msa1071020-mRNA-1:exon:14585;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67367536 | 67367733 | 67367536 | ID=Msa1071020-mRNA-1:exon:14584;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67367857 | 67367972 | 67367857 | ID=Msa1071020-mRNA-1:exon:14583;Parent=Msa1071020-mRNA-1 |
| chr7_2 | exon | 67368003 | 67368031 | 67368003 | ID=Msa1071020-mRNA-1:exon:14582;Parent=Msa1071020-mRNA-1 |
| chr7_2 | five_prime_UTR | 67368003 | 67368031 | 67368003 | ID=Msa1071020-mRNA-1:five_prime_utr;Parent=Msa1071020-mRNA-1 |
| chr7_2 | five_prime_UTR | 67367879 | 67367972 | 67367879 | ID=Msa1071020-mRNA-1:five_prime_utr;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67367857 | 67367878 | 67367857 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67367536 | 67367733 | 67367536 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67367024 | 67367090 | 67367024 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67365989 | 67366320 | 67365989 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67365731 | 67365872 | 67365731 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67365446 | 67365571 | 67365446 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | CDS | 67363439 | 67363823 | 67363439 | ID=Msa1071020-mRNA-1:cds;Parent=Msa1071020-mRNA-1 |
| chr7_2 | three_prime_UTR | 67363139 | 67363438 | 67363139 | ID=Msa1071020-mRNA-1:three_prime_utr;Parent=Msa1071020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
