AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1342460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342460 MtrunA17_Chr1g0171191 94.200 431 8 1 1 431 1 414 0.0 783
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342460 AT3G56160.3 60.574 383 129 4 51 431 47 409 9.42e-144 416
Msa1342460 AT3G56160.1 61.273 377 123 5 57 431 81 436 1.78e-141 411
Msa1342460 AT3G56160.2 59.259 324 112 2 51 374 47 350 8.66e-116 343
Msa1342460 AT3G56160.5 61.679 274 87 2 57 330 81 336 2.11e-98 298
Msa1342460 AT3G56160.4 54.150 253 113 1 51 303 47 296 4.56e-74 234

Find 148 sgRNAs with CRISPR-Local

Find 681 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATGGCCTGTTGGGCTCTT+TGG 0.124690 tig0005653:-15563 Msa1342460:CDS
AAATATCATGTATCCAAAAT+TGG 0.149667 tig0005653:-15762 Msa1342460:CDS
AATTCCAAACGGCCCAATTT+TGG 0.174825 tig0005653:+15749 Msa1342460:intergenic
CAATTACCTTTCCCAAAATA+AGG 0.180711 tig0005653:+12231 Msa1342460:intergenic
ACTTCTTCATCTGACCTTAT+TGG 0.189310 tig0005653:-7382 Msa1342460:CDS
CTCTGATTTCTATTCACTTA+TGG 0.205037 tig0005653:-6590 Msa1342460:three_prime_UTR
AGACATCCACCACTCATTAT+TGG 0.213305 tig0005653:-6492 Msa1342460:three_prime_UTR
GTACAAGAGCATACTAATTT+TGG 0.220761 tig0005653:+6713 Msa1342460:intergenic
CTCTTGTACATTGTTCATTC+TGG 0.239014 tig0005653:-6699 Msa1342460:three_prime_UTR
CATGGCCTGTTGGGCTCTTT+GGG 0.246922 tig0005653:-15562 Msa1342460:CDS
GCGGCGTGAGGATGAGTAAA+TGG 0.248025 tig0005653:+16519 Msa1342460:intergenic
TGTGGTGCATTTGGAGAATC+TGG 0.261628 tig0005653:-7054 Msa1342460:CDS
ATTTGGAGAATCTGGGTTAC+TGG 0.268679 tig0005653:-7046 Msa1342460:CDS
GCCCCTAGCAAAGCTCAAAA+TGG 0.283477 tig0005653:+16307 Msa1342460:intergenic
ACTTTGATTCTGCAGCTTGC+TGG 0.286403 tig0005653:-13832 Msa1342460:intron
TTACATGATTACTTGGTATA+AGG 0.296905 tig0005653:+6544 Msa1342460:intergenic
CAACCCCAAGAATTTATTAC+AGG 0.300555 tig0005653:-14429 Msa1342460:intron
CTAAACCTGTAATAAATTCT+TGG 0.309750 tig0005653:+14424 Msa1342460:intergenic
AATTACCTTTCCCAAAATAA+GGG 0.315621 tig0005653:+12232 Msa1342460:intergenic
TCTATAACCGCTACCATTAC+TGG 0.327775 tig0005653:+7084 Msa1342460:intergenic
CTGTAGAAGCATGGCCTGTT+GGG 0.328247 tig0005653:-15571 Msa1342460:CDS
GAGCCACTTTGTGGTGCATT+TGG 0.332991 tig0005653:-7063 Msa1342460:CDS
GGTAGTATGATGATGGTATT+TGG 0.336153 tig0005653:+16650 Msa1342460:intergenic
TAAACCTGTAATAAATTCTT+GGG 0.340341 tig0005653:+14425 Msa1342460:intergenic
GTATCCAAAATTGGGCCGTT+TGG 0.365828 tig0005653:-15753 Msa1342460:CDS
CTGATTTCTGCGGTGACGTT+AGG 0.368875 tig0005653:-15819 Msa1342460:CDS
CAGCATATAGTTCAATATAA+TGG 0.387674 tig0005653:-6629 Msa1342460:three_prime_UTR
GCTGTAGAAGCATGGCCTGT+TGG 0.391111 tig0005653:-15572 Msa1342460:CDS
AATATTACCCTGGAAAAGTA+TGG 0.392592 tig0005653:+14465 Msa1342460:intergenic
ATAGTTCAATATAATGGATA+TGG 0.393051 tig0005653:-6623 Msa1342460:three_prime_UTR
TTAAGCCACCTTGACATTAC+CGG 0.393563 tig0005653:+6875 Msa1342460:intergenic
AGTTGGCATACAGCAAAATA+TGG 0.395674 tig0005653:+14005 Msa1342460:intergenic
ACAGTAATATCTAACTTGTT+AGG 0.396771 tig0005653:-13781 Msa1342460:CDS
CCATGACCTCCGTCGAGTGC+GGG 0.399531 tig0005653:+16555 Msa1342460:intergenic
AGAGTTTAGACGAGGGAATG+AGG 0.402599 tig0005653:+16490 Msa1342460:intergenic
TGGGGCGGTGGCGTAGAGTA+AGG 0.405170 tig0005653:+16417 Msa1342460:intergenic
AGGGGCAATGTCTTACCCTT+AGG 0.420650 tig0005653:-16290 Msa1342460:intron
GGACTGCTTACATGATTACT+TGG 0.421776 tig0005653:+6537 Msa1342460:intergenic
AATATCATGTATCCAAAATT+GGG 0.421936 tig0005653:-15761 Msa1342460:CDS
GTCTGAAGGGAGTGGGGCGG+TGG 0.425306 tig0005653:+16405 Msa1342460:intergenic
CGGAGTCTTTCAATTATCTC+TGG 0.427541 tig0005653:-7339 Msa1342460:CDS
ACTAGCCCAAAGAGCCCAAC+AGG 0.444040 tig0005653:+15557 Msa1342460:intergenic
TAGGTTTCTTTATGTTTATG+AGG 0.448261 tig0005653:-12123 Msa1342460:intron
AATGCTATTGAATACCAATA+AGG 0.454180 tig0005653:+7368 Msa1342460:intergenic
AAGAGTGTTAACAATTTGCT+TGG 0.457278 tig0005653:-6760 Msa1342460:three_prime_UTR
TCAGAAAACATTACCAGTAA+TGG 0.457392 tig0005653:-7097 Msa1342460:intron
CAGGGAGATGGTAGTGGTAG+TGG 0.458295 tig0005653:-16365 Msa1342460:CDS
TCATCTGTGGATTGATATGC+TGG 0.458402 tig0005653:-6818 Msa1342460:three_prime_UTR
ATCACAAAATTTGTAGCTAG+TGG 0.459990 tig0005653:-12317 Msa1342460:CDS
CATTATATTGAACTATATGC+TGG 0.465582 tig0005653:+6630 Msa1342460:intergenic
ACCATGTGCTCAATCCCATC+AGG 0.465639 tig0005653:-16384 Msa1342460:CDS
TGATTTCTATTCACTTATGG+TGG 0.468754 tig0005653:-6587 Msa1342460:three_prime_UTR
GGATTAACATGTCCTAGTCT+TGG 0.479373 tig0005653:-15798 Msa1342460:CDS
CTGTAATAAATTCTTGGGGT+TGG 0.480588 tig0005653:+14430 Msa1342460:intergenic
GCGTAGAGTAAGGGATTTAA+CGG 0.480814 tig0005653:+16427 Msa1342460:intergenic
AGATGACGAGGGCGGGAAGA+AGG 0.486259 tig0005653:+16458 Msa1342460:intergenic
AAATTTGTAGCTAGTGGAGT+TGG 0.486943 tig0005653:-12311 Msa1342460:CDS
TTTCTTGTAGCTATTGGACT+GGG 0.493824 tig0005653:-8726 Msa1342460:CDS
CCCTGATGGGATTGAGCACA+TGG 0.499515 tig0005653:+16383 Msa1342460:intergenic
AAGAGTCAAAAGGATTGAGC+TGG 0.500220 tig0005653:-16337 Msa1342460:CDS
ATATCATCCTGCAGGTACCT+TGG 0.501746 tig0005653:-8800 Msa1342460:intron
CCCCTAGCAAAGCTCAAAAT+GGG 0.502048 tig0005653:+16308 Msa1342460:intergenic
CACTCGACGGAGGTCATGGC+GGG 0.511861 tig0005653:-16551 Msa1342460:exon
ATGATGATGGTATTTGGTGG+TGG 0.515466 tig0005653:+16656 Msa1342460:intergenic
CTGAACTAGGCAGACTGTAA+TGG 0.515792 tig0005653:+16580 Msa1342460:intergenic
CCCGCACTCGACGGAGGTCA+TGG 0.516467 tig0005653:-16555 Msa1342460:exon
GCCATGACCTCCGTCGAGTG+CGG 0.518878 tig0005653:+16554 Msa1342460:intergenic
CCTTCCATGAGCTTACTGCT+AGG 0.520456 tig0005653:-12142 Msa1342460:CDS
GGAGTGAAGATGACGAGGGC+GGG 0.520652 tig0005653:+16451 Msa1342460:intergenic
GAAACCTAGCAGTAAGCTCA+TGG 0.520939 tig0005653:+12138 Msa1342460:intergenic
ACACCACTTGATAATGTAGT+TGG 0.522256 tig0005653:+13988 Msa1342460:intergenic
CGGCGTGAGGATGAGTAAAT+GGG 0.522959 tig0005653:+16520 Msa1342460:intergenic
GATGACGAGGGCGGGAAGAA+GGG 0.525355 tig0005653:+16459 Msa1342460:intergenic
AGTGGAAGCAAAGAGTCAAA+AGG 0.527701 tig0005653:-16347 Msa1342460:CDS
TGCTGGAGCAAATACTGCAC+TGG 0.529303 tig0005653:-13815 Msa1342460:CDS
TCCCATCAGGGAGATGGTAG+TGG 0.534824 tig0005653:-16371 Msa1342460:CDS
GAAATAGAGAGTTTAGACGA+GGG 0.537319 tig0005653:+16483 Msa1342460:intergenic
GACTTGCTCACTTGTATCCA+AGG 0.541072 tig0005653:+8783 Msa1342460:intergenic
GTGGTGCATTTGGAGAATCT+GGG 0.542143 tig0005653:-7053 Msa1342460:CDS
ACTCATACTAGTTGCAAGCC+AGG 0.542506 tig0005653:-7274 Msa1342460:intron
AAAGATCGGAAACAATATGC+TGG 0.543161 tig0005653:+6667 Msa1342460:intergenic
TATTCAATAGCATTGCTGTC+CGG 0.543451 tig0005653:-7359 Msa1342460:CDS
GTGTTGCGAAGCGAAGAAAT+TGG 0.543607 tig0005653:-15599 Msa1342460:CDS
CATGACCTCCGTCGAGTGCG+GGG 0.544226 tig0005653:+16556 Msa1342460:intergenic
TACCACTACCATCTCCCTGA+TGG 0.544344 tig0005653:+16369 Msa1342460:intergenic
ACCACTACCATCTCCCTGAT+GGG 0.545056 tig0005653:+16370 Msa1342460:intergenic
GGATTGAGCACATGGTCTGA+AGG 0.546750 tig0005653:+16391 Msa1342460:intergenic
GCACATGGTCTGAAGGGAGT+GGG 0.546886 tig0005653:+16398 Msa1342460:intergenic
AGCACATGGTCTGAAGGGAG+TGG 0.558159 tig0005653:+16397 Msa1342460:intergenic
CTGAATTTGTAATATTACCC+TGG 0.558885 tig0005653:+14455 Msa1342460:intergenic
CACATGGTCTGAAGGGAGTG+GGG 0.559219 tig0005653:+16399 Msa1342460:intergenic
AATGAACGGTAGTATGATGA+TGG 0.559563 tig0005653:+16643 Msa1342460:intergenic
ATTAGATGTGTTGCAATACA+AGG 0.561844 tig0005653:+7018 Msa1342460:intergenic
GAACACCTTGTAGATTATTG+TGG 0.563250 tig0005653:-6937 Msa1342460:intron
ATTACCTTTCCCAAAATAAG+GGG 0.563723 tig0005653:+12233 Msa1342460:intergenic
TGATGATGGTATTTGGTGGT+GGG 0.565243 tig0005653:+16657 Msa1342460:intergenic
GCGGTTATAGAGCCACTTTG+TGG 0.565801 tig0005653:-7072 Msa1342460:CDS
ATTATATTGAACTATATGCT+GGG 0.566919 tig0005653:+6631 Msa1342460:intergenic
TATTGCAACACATCTAATCC+AGG 0.567214 tig0005653:-7013 Msa1342460:intron
TCATCATTGATTGTCATCTG+TGG 0.573985 tig0005653:-6831 Msa1342460:three_prime_UTR
AGTCTTTCAATTATCTCTGG+TGG 0.578014 tig0005653:-7336 Msa1342460:CDS
GCTCAATCCCATCAGGGAGA+TGG 0.579834 tig0005653:-16377 Msa1342460:CDS
CAGTACCAACGCGAAATGAA+CGG 0.581420 tig0005653:+16629 Msa1342460:intergenic
AGAAATAGAGAGTTTAGACG+AGG 0.581903 tig0005653:+16482 Msa1342460:intergenic
TGATCCCTGAGAAAAGCTTA+CGG 0.582266 tig0005653:+9078 Msa1342460:intergenic
TCAACAGCGCAACCAAGACT+AGG 0.588891 tig0005653:+15786 Msa1342460:intergenic
TATTGAACTATATGCTGGGA+CGG 0.589004 tig0005653:+6635 Msa1342460:intergenic
GGGGCGGTGGCGTAGAGTAA+GGG 0.590616 tig0005653:+16418 Msa1342460:intergenic
ATGGTCTGAAGGGAGTGGGG+CGG 0.591354 tig0005653:+16402 Msa1342460:intergenic
GAAACACATCATGCTGCACA+TGG 0.591773 tig0005653:-6787 Msa1342460:three_prime_UTR
ATGCGTCGCAAAGACAATAC+CGG 0.593015 tig0005653:-6894 Msa1342460:CDS
GATTGAGCACATGGTCTGAA+GGG 0.593925 tig0005653:+16392 Msa1342460:intergenic
AACATTACCAGTAATGGTAG+CGG 0.596517 tig0005653:-7091 Msa1342460:CDS
GAGGATGAGTAAATGGGCGG+TGG 0.603068 tig0005653:+16526 Msa1342460:intergenic
CAGAGATAATTGAAAGACTC+CGG 0.603417 tig0005653:+7340 Msa1342460:intergenic
AAGTGGTGTTGCACTTACCC+AGG 0.603604 tig0005653:-13974 Msa1342460:intron
TGCAACTAGTATGAGTGCGT+TGG 0.605826 tig0005653:+7281 Msa1342460:intergenic
ATGACCTCCGTCGAGTGCGG+GGG 0.606876 tig0005653:+16557 Msa1342460:intergenic
GAAAAGCCAATAATGAGTGG+TGG 0.607193 tig0005653:+6486 Msa1342460:intergenic
AGACAATACCGGTAATGTCA+AGG 0.607934 tig0005653:-6883 Msa1342460:CDS
TCGGAAACAATATGCTGGAA+CGG 0.611045 tig0005653:+6672 Msa1342460:intergenic
ATGATTACTTGGTATAAGGA+CGG 0.613622 tig0005653:+6548 Msa1342460:intergenic
CCTAGCAGTAAGCTCATGGA+AGG 0.615572 tig0005653:+12142 Msa1342460:intergenic
AAACCTGTAATAAATTCTTG+GGG 0.616241 tig0005653:+14426 Msa1342460:intergenic
CGGAGTGAAGATGACGAGGG+CGG 0.617119 tig0005653:+16450 Msa1342460:intergenic
TCAGAAAAGCCAATAATGAG+TGG 0.618598 tig0005653:+6483 Msa1342460:intergenic
GACGGACTGAAAATAAAGAT+CGG 0.620683 tig0005653:+6653 Msa1342460:intergenic
TCTCCAAATGCACCACAAAG+TGG 0.621477 tig0005653:+7060 Msa1342460:intergenic
ATGAGGAAGAATGCGGCGTG+AGG 0.622067 tig0005653:+16507 Msa1342460:intergenic
TTACCTTTCCCAAAATAAGG+GGG 0.625879 tig0005653:+12234 Msa1342460:intergenic
ATTTGTAGCTCTGATTTCTG+CGG 0.627818 tig0005653:-15829 Msa1342460:intron
GGATACAAGTGAGCAAGTCA+AGG 0.631449 tig0005653:-8779 Msa1342460:CDS
TTGGTGCAGCTGTAGAAGCA+TGG 0.632248 tig0005653:-15580 Msa1342460:CDS
AGAGTCAAAAGGATTGAGCT+GGG 0.634429 tig0005653:-16336 Msa1342460:CDS
TACTACCGTTCATTTCGCGT+TGG 0.635588 tig0005653:-16634 Msa1342460:five_prime_UTR
AGCAGTAAGCTCATGGAAGG+AGG 0.643587 tig0005653:+12145 Msa1342460:intergenic
ATGCCAACTACATTATCAAG+TGG 0.643732 tig0005653:-13991 Msa1342460:CDS
ATGTCAAGGTGGCTTAAGAG+AGG 0.643975 tig0005653:-6869 Msa1342460:exon
AATTAAACAGAAACAATGAA+AGG 0.646372 tig0005653:+6441 Msa1342460:intergenic
CCATGTGCTCAATCCCATCA+GGG 0.654094 tig0005653:-16383 Msa1342460:CDS
AGTATGATGATGGTATTTGG+TGG 0.676008 tig0005653:+16653 Msa1342460:intergenic
ACGGCGGAGTGAAGATGACG+AGG 0.686148 tig0005653:+16446 Msa1342460:intergenic
CGAGGGAATGAGGAAGAATG+CGG 0.693362 tig0005653:+16500 Msa1342460:intergenic
GCACTCGACGGAGGTCATGG+CGG 0.699918 tig0005653:-16552 Msa1342460:exon
CGTGAGGATGAGTAAATGGG+CGG 0.705388 tig0005653:+16523 Msa1342460:intergenic
CAATACCGGTAATGTCAAGG+TGG 0.719218 tig0005653:-6880 Msa1342460:CDS
CGGCGGAGTGAAGATGACGA+GGG 0.730228 tig0005653:+16447 Msa1342450:intergenic
TAGAGTAAGGGATTTAACGG+CGG 0.747872 tig0005653:+16430 Msa1342450:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTAATTTAAGATAGA+AGG + tig0005653:8083-8102 Msa1342460:intergenic 10.0%
!!! ATTAAATTTTAGTAATTGAA+CGG - tig0005653:9415-9434 Msa1342460:intron 10.0%
!!! AGTTTAAATTAATTTGTTAA+TGG - tig0005653:12600-12619 Msa1342460:intron 10.0%
!!! GTTTAAATTAATTTGTTAAT+GGG - tig0005653:12601-12620 Msa1342460:intron 10.0%
!!! TATTATTTCTATTATTAACT+CGG + tig0005653:12880-12899 Msa1342460:intergenic 10.0%
!! AGTTAATAATAGAAATAATA+AGG - tig0005653:12880-12899 Msa1342460:intron 10.0%
!!! TATTTTAGATTTGATTAAAT+AGG - tig0005653:13561-13580 Msa1342460:intron 10.0%
!!! ATTTTAGATTTGATTAAATA+GGG - tig0005653:13562-13581 Msa1342460:intron 10.0%
!!! AATTTATTAATTGTTTGTTT+TGG - tig0005653:14442-14461 Msa1342460:CDS 10.0%
!! AATAAAAATAGAAATTAACT+TGG - tig0005653:14871-14890 Msa1342460:intron 10.0%
!! AAATATATTCGAACAAAATA+GGG + tig0005653:6852-6871 Msa1342460:intergenic 15.0%
!! TAAATATATTCGAACAAAAT+AGG + tig0005653:6853-6872 Msa1342460:intergenic 15.0%
!! AAATTTATGATCAGATTATA+GGG - tig0005653:7663-7682 Msa1342460:intron 15.0%
!!! TCAAGATTTAAGATAATTAA+CGG + tig0005653:7965-7984 Msa1342460:intergenic 15.0%
!!! ATCTTTTTAAATTGAAGAAA+TGG - tig0005653:8778-8797 Msa1342460:CDS 15.0%
!! ATAAGCTATATAAAACTTAT+AGG + tig0005653:9169-9188 Msa1342460:intergenic 15.0%
!! TCTATATTGATAGAAAATAT+TGG - tig0005653:9455-9474 Msa1342460:intron 15.0%
!! AAAATATTGTTTAGTACATT+TGG + tig0005653:9974-9993 Msa1342460:intergenic 15.0%
!! AAAACAATAATAAGATTAGA+TGG + tig0005653:10676-10695 Msa1342460:intergenic 15.0%
!! ATAATCCATAAAAATTGTAA+TGG + tig0005653:11336-11355 Msa1342460:intergenic 15.0%
!! ATAATCCATAAAAATAGTAA+TGG + tig0005653:11417-11436 Msa1342460:intergenic 15.0%
!!! AAGAGTCATTTTAAATAATA+TGG + tig0005653:11527-11546 Msa1342460:intergenic 15.0%
!!! TTCATTTTATCAGAAATATA+TGG - tig0005653:11646-11665 Msa1342460:intron 15.0%
!! AAAAATCCGTTAAATATTAT+GGG + tig0005653:12805-12824 Msa1342460:intergenic 15.0%
!! AAAAAATCCGTTAAATATTA+TGG + tig0005653:12806-12825 Msa1342460:intergenic 15.0%
!!! AATATTTAACGGATTTTTTA+AGG - tig0005653:12807-12826 Msa1342460:intron 15.0%
!!! ATATTTAACGGATTTTTTAA+GGG - tig0005653:12808-12827 Msa1342460:intron 15.0%
!!! TGATTAATTTTCTTTTTATG+TGG - tig0005653:13511-13530 Msa1342460:intron 15.0%
!!! ATTTTTTTGCTCTTTATTTA+AGG - tig0005653:13811-13830 Msa1342460:CDS 15.0%
!! AAATATAATAATTCAAGAGA+AGG + tig0005653:14046-14065 Msa1342460:intergenic 15.0%
!! TTTCATTATTCAACTAAAAA+AGG - tig0005653:14502-14521 Msa1342460:intron 15.0%
!! TAATTAATGATTGATATTAG+AGG - tig0005653:14659-14678 Msa1342460:intron 15.0%
!!! AAATAACTACTCTATTTTTA+TGG - tig0005653:14784-14803 Msa1342460:intron 15.0%
!!! AATAACTACTCTATTTTTAT+GGG - tig0005653:14785-14804 Msa1342460:intron 15.0%
!! AAATAGAATTGATTGAAAAA+TGG - tig0005653:15211-15230 Msa1342460:intron 15.0%
!! AATAGAATTGATTGAAAAAT+GGG - tig0005653:15212-15231 Msa1342460:intron 15.0%
!! TCTTTCACTTAATTTATTAA+AGG - tig0005653:15319-15338 Msa1342460:intron 15.0%
!! CAAAAAATCATACCAAATTA+GGG + tig0005653:7070-7089 Msa1342460:intergenic 20.0%
!! ACAAAAAATCATACCAAATT+AGG + tig0005653:7071-7090 Msa1342460:intergenic 20.0%
!! TTCATTTGATTATGTTATGA+GGG - tig0005653:7176-7195 Msa1342460:intron 20.0%
!! AAATATCATGTATCCAAAAT+TGG - tig0005653:7302-7321 Msa1342460:CDS 20.0%
!! AATATCATGTATCCAAAATT+GGG - tig0005653:7303-7322 Msa1342460:CDS 20.0%
!! ATTTATAGATTGCTTTACTA+CGG - tig0005653:7551-7570 Msa1342460:intron 20.0%
!! CAAATTTATGATCAGATTAT+AGG - tig0005653:7662-7681 Msa1342460:intron 20.0%
!! ATAATATTAAGCAATGAAAC+AGG + tig0005653:7881-7900 Msa1342460:intergenic 20.0%
!! ATCGATATTTGATAAAACAA+TGG + tig0005653:8445-8464 Msa1342460:intergenic 20.0%
!! TAAACCTGTAATAAATTCTT+GGG + tig0005653:8642-8661 Msa1342460:intergenic 20.0%
!! CTTCAATTTAAAAAGATCTA+AGG + tig0005653:8775-8794 Msa1342460:intergenic 20.0%
!! AATAGAAATAAACACAGAAA+AGG + tig0005653:9146-9165 Msa1342460:intergenic 20.0%
!! AAGTAAAACACTATCTAATT+AGG + tig0005653:9639-9658 Msa1342460:intergenic 20.0%
!! CTTGAATGATTATAAAATAC+AGG - tig0005653:9904-9923 Msa1342460:intron 20.0%
!! TCTTAAAACACTTAAAAAAG+TGG - tig0005653:10102-10121 Msa1342460:intron 20.0%
!! TTATTTATACATGCACTATT+AGG - tig0005653:10325-10344 Msa1342460:intron 20.0%
!!! ATTAGGTTATTTTATACTAC+TGG - tig0005653:10342-10361 Msa1342460:intron 20.0%
!!! TTAGGTTATTTTATACTACT+GGG - tig0005653:10343-10362 Msa1342460:intron 20.0%
!! AAAATCATGAGAATACAAAA+AGG + tig0005653:10440-10459 Msa1342460:intergenic 20.0%
!! AAAAGATAGAAAAAGAAAGA+AGG + tig0005653:10615-10634 Msa1342460:intergenic 20.0%
!! TCACTTATTGAACTTTAATT+TGG + tig0005653:11491-11510 Msa1342460:intergenic 20.0%
!!! TTGATTGCATATATAGTTTT+TGG - tig0005653:11578-11597 Msa1342460:intron 20.0%
!!! ATATTTTTCATTGCTTTGAA+TGG - tig0005653:11784-11803 Msa1342460:intron 20.0%
!!! TATTTTTCATTGCTTTGAAT+GGG - tig0005653:11785-11804 Msa1342460:intron 20.0%
!! ATTATGTTCTTAAGAATTGA+GGG + tig0005653:12092-12111 Msa1342460:intergenic 20.0%
!! TATTATGTTCTTAAGAATTG+AGG + tig0005653:12093-12112 Msa1342460:intergenic 20.0%
!!! ATGGTCATAAATTTAAGATT+AGG + tig0005653:12213-12232 Msa1342460:intergenic 20.0%
!! CAAATACCCATAATATTTAA+CGG - tig0005653:12796-12815 Msa1342460:intron 20.0%
!!! AAGGTATTACTGAAAAATTA+TGG - tig0005653:14232-14251 Msa1342460:intron 20.0%
!! GAATAATGAAATGCAAAATA+TGG + tig0005653:14493-14512 Msa1342460:intergenic 20.0%
!!! ATAACTACTCTATTTTTATG+GGG - tig0005653:14786-14805 Msa1342460:intron 20.0%
!!! ATTAGAAATAGTTTAGAGTT+CGG - tig0005653:14928-14947 Msa1342460:intron 20.0%
!! AATTAAGTGAAAGAAAAGAT+TGG + tig0005653:15313-15332 Msa1342460:intergenic 20.0%
!! TTAAAAATAAATCAATCACC+TGG + tig0005653:16072-16091 Msa1342460:intergenic 20.0%
!! ATTATATTGAACTATATGCT+GGG + tig0005653:16436-16455 Msa1342460:intergenic 20.0%
!!! ATAGTTCAATATAATGGATA+TGG - tig0005653:16441-16460 Msa1342460:CDS 20.0%
!! AATTAAACAGAAACAATGAA+AGG + tig0005653:16626-16645 Msa1342460:intergenic 20.0%
!!! TTTTTTGTCAATGTCTAAGT+TGG - tig0005653:7083-7102 Msa1342460:CDS 25.0%
!! TTTTTGTCAATGTCTAAGTT+GGG - tig0005653:7084-7103 Msa1342460:CDS 25.0%
! AACGAGTAAAAGAACAAATT+TGG + tig0005653:7130-7149 Msa1342460:intergenic 25.0%
! CTTCATTTGATTATGTTATG+AGG - tig0005653:7175-7194 Msa1342460:intron 25.0%
! GAGATAACAAAAATTCCAAA+CGG + tig0005653:7329-7348 Msa1342460:intergenic 25.0%
!!! TTTGGAATTTTTGTTATCTC+AGG - tig0005653:7329-7348 Msa1342460:CDS 25.0%
! ACAAATAGATGCAAAAGATT+AGG + tig0005653:7367-7386 Msa1342460:intergenic 25.0%
!!! GTTTTGATTTTATTACAACC+CGG - tig0005653:7391-7410 Msa1342460:intron 25.0%
!! TATTATGGACCTCTTTTTAA+AGG - tig0005653:7692-7711 Msa1342460:intron 25.0%
!! ATTATGGACCTCTTTTTAAA+GGG - tig0005653:7693-7712 Msa1342460:intron 25.0%
! AAAGTTAACAAAATTGAAGC+GGG + tig0005653:7755-7774 Msa1342460:intergenic 25.0%
! CAAAGTTAACAAAATTGAAG+CGG + tig0005653:7756-7775 Msa1342460:intergenic 25.0%
! GAAATCAGGTTATCAAAATT+CGG + tig0005653:8005-8024 Msa1342460:intergenic 25.0%
! AAACTTTGCAAAATCAGATT+TGG - tig0005653:8031-8050 Msa1342460:intron 25.0%
! AAATAGTGATACAGAGTAAT+TGG - tig0005653:8204-8223 Msa1342460:intron 25.0%
! AAGATTCTTATTACGAACTT+TGG - tig0005653:8340-8359 Msa1342460:intron 25.0%
! AGATTCTTATTACGAACTTT+GGG - tig0005653:8341-8360 Msa1342460:intron 25.0%
!!! TGATCAATGGTTTTAAGATT+TGG - tig0005653:8406-8425 Msa1342460:intron 25.0%
! GATAAAACAATGGTTTAGAT+AGG + tig0005653:8435-8454 Msa1342460:intergenic 25.0%
! AAACCTGTAATAAATTCTTG+GGG + tig0005653:8641-8660 Msa1342460:intergenic 25.0%
! CTAAACCTGTAATAAATTCT+TGG + tig0005653:8643-8662 Msa1342460:intergenic 25.0%
!!! TGACAAAAGTACTATGTAAA+TGG + tig0005653:8703-8722 Msa1342460:intergenic 25.0%
! TATCATAATTCTTGGAAAGA+TGG - tig0005653:8853-8872 Msa1342460:intron 25.0%
!! TGAGAGAAAGATATTGTTTT+AGG + tig0005653:8903-8922 Msa1342460:intergenic 25.0%
! CATGTATTGTAAATATCCAA+CGG - tig0005653:8933-8952 Msa1342460:intron 25.0%
! ATCTTGAATTGCATGAAAAT+TGG + tig0005653:9010-9029 Msa1342460:intergenic 25.0%
!! ATATTTTCTTGCTTTCTACA+GGG - tig0005653:9032-9051 Msa1342460:intron 25.0%
!!! ACAGTAATATCTAACTTGTT+AGG - tig0005653:9283-9302 Msa1342460:intron 25.0%
! CTAAAATTTAATCAGAGCAT+AGG + tig0005653:9407-9426 Msa1342460:intergenic 25.0%
!!! ACTCTTGGTTTTTCTATATA+AGG + tig0005653:9590-9609 Msa1342460:intergenic 25.0%
! TAAAAATGTGTTACAACTCT+TGG + tig0005653:9605-9624 Msa1342460:intergenic 25.0%
!! AGAGTTGTAACACATTTTTA+AGG - tig0005653:9605-9624 Msa1342460:intron 25.0%
! AAAAGTAATTGTGAGCAATT+AGG - tig0005653:9770-9789 Msa1342460:intron 25.0%
! ATATACAAAGATCAAGTAGT+AGG + tig0005653:9815-9834 Msa1342460:intergenic 25.0%
! TATACTAGTAAAATGAGCTA+AGG - tig0005653:10127-10146 Msa1342460:intron 25.0%
!!! TGCTTTTTATTTATAGACAC+AGG - tig0005653:10387-10406 Msa1342460:intron 25.0%
!!! GCTTTTTATTTATAGACACA+GGG - tig0005653:10388-10407 Msa1342460:intron 25.0%
! GAAGATATAACATGTATACA+AGG + tig0005653:10511-10530 Msa1342460:intergenic 25.0%
!!! ACAAATTTTGTGATGGAAAA+TGG + tig0005653:10741-10760 Msa1342460:intergenic 25.0%
!! AAGACTTTTAAATAACTGCT+TGG + tig0005653:10793-10812 Msa1342460:intergenic 25.0%
!!! ATATTAATCCCCCTTATTTT+GGG - tig0005653:10822-10841 Msa1342460:intron 25.0%
! AATTACCTTTCCCAAAATAA+GGG + tig0005653:10835-10854 Msa1342460:intergenic 25.0%
! TAGGTTTCTTTATGTTTATG+AGG - tig0005653:10941-10960 Msa1342460:intron 25.0%
! AAATTCACACTTAGAAGAAT+GGG - tig0005653:11194-11213 Msa1342460:intron 25.0%
! ATCCATAAAAATTGTAATGG+AGG + tig0005653:11333-11352 Msa1342460:intergenic 25.0%
!!! TACCACCATTACTATTTTTA+TGG - tig0005653:11409-11428 Msa1342460:intron 25.0%
! ATCCATAAAAATAGTAATGG+TGG + tig0005653:11414-11433 Msa1342460:intergenic 25.0%
!! TATGGATTATAGCAAGTAAT+AGG - tig0005653:11427-11446 Msa1342460:intron 25.0%
! AAATAATATGGCCAGTAAAT+TGG + tig0005653:11515-11534 Msa1342460:intergenic 25.0%
! ATGATGCAACTAAATCAATT+TGG + tig0005653:11626-11645 Msa1342460:intergenic 25.0%
!!! GACAGTTTAAATTTTTTCTG+AGG - tig0005653:11713-11732 Msa1342460:intron 25.0%
! AAAGCAGTATACAATAGTTA+TGG - tig0005653:11975-11994 Msa1342460:intron 25.0%
! AAGCAGTATACAATAGTTAT+GGG - tig0005653:11976-11995 Msa1342460:intron 25.0%
! GGAAATAATTACAAGTGAAA+TGG + tig0005653:12026-12045 Msa1342460:intergenic 25.0%
! TAATATAGATGTGAAGTGAA+AGG - tig0005653:12144-12163 Msa1342460:CDS 25.0%
!!! AATTCCCCATATTTTTAAAG+AGG + tig0005653:12241-12260 Msa1342460:intergenic 25.0%
! ACTAATTCCCCTTAAAAATA+TGG - tig0005653:12520-12539 Msa1342460:intron 25.0%
!!! AAGCACTTCCATATTTTTAA+GGG + tig0005653:12531-12550 Msa1342460:intergenic 25.0%
!!! ATTAAGTTGGCTAATTAGTT+TGG - tig0005653:12854-12873 Msa1342460:intron 25.0%
! AATAGAAATAATAAGGCACA+TGG - tig0005653:12887-12906 Msa1342460:intron 25.0%
!! AATCTCTCTTCCTTATTTAT+AGG + tig0005653:12913-12932 Msa1342460:intergenic 25.0%
! ATAAATAAGGAAGAGAGATT+AGG - tig0005653:12913-12932 Msa1342460:intron 25.0%
! TAAATAAGGAAGAGAGATTA+GGG - tig0005653:12914-12933 Msa1342460:intron 25.0%
! TTAATCATTCATCCATCATT+CGG - tig0005653:13025-13044 Msa1342460:intron 25.0%
!! TCTCATCTAAAATACACTAA+AGG - tig0005653:13048-13067 Msa1342460:intron 25.0%
!! GATTTTTCACATTGTAAACT+GGG - tig0005653:13157-13176 Msa1342460:intron 25.0%
! TAGTCTAGAAGAAGAATTAA+GGG + tig0005653:13188-13207 Msa1342460:intergenic 25.0%
! TTGACTGTATATCTATATAC+GGG + tig0005653:13378-13397 Msa1342460:intergenic 25.0%
! GTTGACTGTATATCTATATA+CGG + tig0005653:13379-13398 Msa1342460:intergenic 25.0%
! AATGATAAGTATGTGCATAA+AGG - tig0005653:13438-13457 Msa1342460:intron 25.0%
! AAAGAAAATTAATCAGCTCA+AGG + tig0005653:13506-13525 Msa1342460:intergenic 25.0%
!! ATTTTCTTTTTATGTGGAGT+TGG - tig0005653:13517-13536 Msa1342460:intron 25.0%
! ATTTACATATACATGCAGTA+GGG + tig0005653:13634-13653 Msa1342460:intergenic 25.0%
! TATTTACATATACATGCAGT+AGG + tig0005653:13635-13654 Msa1342460:intergenic 25.0%
!!! TAATTTGTTCTTTCACTTAC+TGG + tig0005653:13660-13679 Msa1342460:intergenic 25.0%
!! ACCTGTTTTATGTCTTTTTT+TGG - tig0005653:13729-13748 Msa1342460:intron 25.0%
!! CCTGTTTTATGTCTTTTTTT+GGG - tig0005653:13730-13749 Msa1342460:intron 25.0%
! ATAGCTACAAGAAAAACTTT+GGG + tig0005653:14332-14351 Msa1342460:intergenic 25.0%
! AATAGCTACAAGAAAAACTT+TGG + tig0005653:14333-14352 Msa1342460:intergenic 25.0%
!! AAAGTTTTTCTTGTAGCTAT+TGG - tig0005653:14332-14351 Msa1342460:intron 25.0%
! ATTTCAACAAACTTGTGATT+TGG + tig0005653:14694-14713 Msa1342460:intergenic 25.0%
! AAATAGTGAACCATTATATC+TGG + tig0005653:14748-14767 Msa1342460:intergenic 25.0%
!!! TAACTACTCTATTTTTATGG+GGG - tig0005653:14787-14806 Msa1342460:intron 25.0%
!!! GAACTCTAAACTATTTCTAA+TGG + tig0005653:14929-14948 Msa1342460:intergenic 25.0%
! ATTTCCAAATGTAAGTAGTA+AGG - tig0005653:14989-15008 Msa1342460:intron 25.0%
! TTTCCAAATGTAAGTAGTAA+GGG - tig0005653:14990-15009 Msa1342460:intron 25.0%
!! TTTTATGATCAATAAAGCTC+AGG - tig0005653:15084-15103 Msa1342460:intron 25.0%
! TATTAAAGGATGCTATTCTT+AGG - tig0005653:15333-15352 Msa1342460:intron 25.0%
! AATGCTATTGAATACCAATA+AGG + tig0005653:15699-15718 Msa1342460:intergenic 25.0%
! CAAACTGAAACTAATTTCAT+AGG + tig0005653:15859-15878 Msa1342460:intergenic 25.0%
! CATTATATTGAACTATATGC+TGG + tig0005653:16437-16456 Msa1342460:intergenic 25.0%
! CAGCATATAGTTCAATATAA+TGG - tig0005653:16435-16454 Msa1342460:CDS 25.0%
! TTACATGATTACTTGGTATA+AGG + tig0005653:16523-16542 Msa1342460:intergenic 25.0%
ATTTCTTGTCAGAGACAATT+GGG + tig0005653:6886-6905 Msa1342460:intergenic 30.0%
TATTTCTTGTCAGAGACAAT+TGG + tig0005653:6887-6906 Msa1342460:intergenic 30.0%
GAAAATGTCAGAGACTAATT+TGG + tig0005653:6913-6932 Msa1342460:intergenic 30.0%
!! TAATTTGTTATGGAAGTACG+AGG - tig0005653:6960-6979 Msa1342460:intron 30.0%
!! AATTTGTTATGGAAGTACGA+GGG - tig0005653:6961-6980 Msa1342460:intron 30.0%
ATTGGAATTCAGTGACTTTA+GGG - tig0005653:6996-7015 Msa1342460:intron 30.0%
TTGTTATCTCAGGTTAATGT+TGG - tig0005653:7339-7358 Msa1342460:CDS 30.0%
! TTGGATTCTAGTTGTTTAAC+TGG - tig0005653:7619-7638 Msa1342460:intron 30.0%
TAAAAAGAGGTCCATAATAG+AGG + tig0005653:7691-7710 Msa1342460:intergenic 30.0%
ATCAAAATCTGAAAAGTGGT+TGG + tig0005653:7856-7875 Msa1342460:intergenic 30.0%
GGTTATCAAAATCTGAAAAG+TGG + tig0005653:7860-7879 Msa1342460:intergenic 30.0%
!! ATCAAAATTCGGAAAGTGTT+TGG + tig0005653:7994-8013 Msa1342460:intergenic 30.0%
!!! CAAAGTTTTTAGCAGAAATC+AGG + tig0005653:8019-8038 Msa1342460:intergenic 30.0%
!!! TGTTTTGACATGGTTGAATA+GGG + tig0005653:8116-8135 Msa1342460:intergenic 30.0%
!!! TTGTTTTGACATGGTTGAAT+AGG + tig0005653:8117-8136 Msa1342460:intergenic 30.0%
!!! GTTTTCATCTTGTTTTGACA+TGG + tig0005653:8126-8145 Msa1342460:intergenic 30.0%
! GCTTTAAGCTTTAATACTCA+CGG + tig0005653:8275-8294 Msa1342460:intergenic 30.0%
AAAGCTTGAATCTCTAACTT+AGG - tig0005653:8290-8309 Msa1342460:intron 30.0%
!!! AGATGGATGTTTTAAAGAGA+AGG + tig0005653:8367-8386 Msa1342460:intergenic 30.0%
!! TCTTTAAAACATCCATCTCT+TGG - tig0005653:8369-8388 Msa1342460:intron 30.0%
TTCACATGACTATTGATCAA+TGG - tig0005653:8393-8412 Msa1342460:intron 30.0%
! TGTTCTTTTGTTCTTTTTGC+AGG - tig0005653:8556-8575 Msa1342460:intron 30.0%
AATATTACCCTGGAAAAGTA+TGG + tig0005653:8602-8621 Msa1342460:intergenic 30.0%
CTGAATTTGTAATATTACCC+TGG + tig0005653:8612-8631 Msa1342460:intergenic 30.0%
TGCTTAGAGTAGAATGTAAA+TGG + tig0005653:8666-8685 Msa1342460:intergenic 30.0%
GGTCAGAAATTTATCAATGA+GGG + tig0005653:8754-8773 Msa1342460:intergenic 30.0%
AGGTCAGAAATTTATCAATG+AGG + tig0005653:8755-8774 Msa1342460:intergenic 30.0%
TTCCAAGAATTATGATAGCA+CGG + tig0005653:8850-8869 Msa1342460:intergenic 30.0%
! CATATTTTCTTGCTTTCTAC+AGG - tig0005653:9031-9050 Msa1342460:intron 30.0%
ACGAAAGATAATGATTACCT+GGG + tig0005653:9110-9129 Msa1342460:intergenic 30.0%
TTACTTGATCAACTAGTGTT+TGG - tig0005653:9653-9672 Msa1342460:intron 30.0%
TCAACTAGTGTTTGGATTTA+TGG - tig0005653:9661-9680 Msa1342460:intron 30.0%
TAATCATTCAAGCATACTCA+AGG + tig0005653:9896-9915 Msa1342460:intergenic 30.0%
! TAATGTTTGATTCGATCGAT+CGG + tig0005653:10194-10213 Msa1342460:intergenic 30.0%
!! CATTAGAGTTTTATACAGCT+TGG - tig0005653:10209-10228 Msa1342460:intron 30.0%
TAACTCTCAAACTCTAATAG+TGG + tig0005653:10308-10327 Msa1342460:intergenic 30.0%
! ACTAGCTACAAATTTTGTGA+TGG + tig0005653:10748-10767 Msa1342460:intergenic 30.0%
ATCACAAAATTTGTAGCTAG+TGG - tig0005653:10747-10766 Msa1342460:intron 30.0%
! CTTTTAAATAACTGCTTGGT+GGG + tig0005653:10789-10808 Msa1342460:intergenic 30.0%
! ACTTTTAAATAACTGCTTGG+TGG + tig0005653:10790-10809 Msa1342460:intergenic 30.0%
CAAAATAAGGGGGATTAATA+TGG + tig0005653:10823-10842 Msa1342460:intergenic 30.0%
!! CATATTAATCCCCCTTATTT+TGG - tig0005653:10821-10840 Msa1342460:intron 30.0%
ATTACCTTTCCCAAAATAAG+GGG + tig0005653:10834-10853 Msa1342460:intergenic 30.0%
CAATTACCTTTCCCAAAATA+AGG + tig0005653:10836-10855 Msa1342460:intergenic 30.0%
! TGATTTTTGCAACTATGATG+TGG - tig0005653:10991-11010 Msa1342460:intron 30.0%
TGAATTTCGTCAAAAGGTTT+GGG + tig0005653:11181-11200 Msa1342460:intergenic 30.0%
TAAGTGTGAATTTCGTCAAA+AGG + tig0005653:11187-11206 Msa1342460:intergenic 30.0%
GAAATTCACACTTAGAAGAA+TGG - tig0005653:11193-11212 Msa1342460:intron 30.0%
!!! ACGTGATAGCTTAGTTTTTT+GGG + tig0005653:11293-11312 Msa1342460:intergenic 30.0%
! CACCTCCATTACAATTTTTA+TGG - tig0005653:11328-11347 Msa1342460:intron 30.0%
AGCTATTATGTGAAAGCAAA+TGG - tig0005653:11371-11390 Msa1342460:intron 30.0%
AAGTAATAGGCAACATGATT+GGG - tig0005653:11440-11459 Msa1342460:intron 30.0%
! GTTCTACGTGAATCTTTTAA+AGG - tig0005653:11811-11830 Msa1342460:intron 30.0%
CTCAAACAAGCATAGAAAAT+AGG + tig0005653:11842-11861 Msa1342460:intergenic 30.0%
! CAACAAAGACTTCTAGAAAA+CGG + tig0005653:11954-11973 Msa1342460:intergenic 30.0%
CACTTCACATCTATATTACA+TGG + tig0005653:12142-12161 Msa1342460:intergenic 30.0%
!!! TATTTTTAAAGAGGCGTCTA+TGG + tig0005653:12232-12251 Msa1342460:intergenic 30.0%
! TAGACGCCTCTTTAAAAATA+TGG - tig0005653:12232-12251 Msa1342460:intron 30.0%
! AGACGCCTCTTTAAAAATAT+GGG - tig0005653:12233-12252 Msa1342460:intron 30.0%
TTGCATATTATCTGCATTCA+GGG + tig0005653:12307-12326 Msa1342460:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG + tig0005653:12308-12327 Msa1342460:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG - tig0005653:12428-12447 Msa1342460:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG - tig0005653:12456-12475 Msa1342460:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG - tig0005653:12457-12476 Msa1342460:intron 30.0%
!! AGCACTTCCATATTTTTAAG+GGG + tig0005653:12530-12549 Msa1342460:intergenic 30.0%
!! CAAGCACTTCCATATTTTTA+AGG + tig0005653:12532-12551 Msa1342460:intergenic 30.0%
TGATGATAAATTTCCAAGAG+AGG - tig0005653:12550-12569 Msa1342460:intron 30.0%
!! TTTGTTAATGGGTTAGTTAG+TGG - tig0005653:12612-12631 Msa1342460:intron 30.0%
!! TTGTTAATGGGTTAGTTAGT+GGG - tig0005653:12613-12632 Msa1342460:intron 30.0%
!!! CGGATTTTTTAAGGGTATAT+TGG - tig0005653:12816-12835 Msa1342460:intron 30.0%
ATTCCAAAGAGAGATTAAGT+TGG - tig0005653:12841-12860 Msa1342460:intron 30.0%
AAATAAGGAAGAGAGATTAG+GGG - tig0005653:12915-12934 Msa1342460:intron 30.0%
CAAAGTCTCTTGAATACTTT+GGG - tig0005653:13135-13154 Msa1342460:intron 30.0%
! GGATTTTTCACATTGTAAAC+TGG - tig0005653:13156-13175 Msa1342460:intron 30.0%
CTAGTCTAGAAGAAGAATTA+AGG + tig0005653:13189-13208 Msa1342460:intergenic 30.0%
ATATATATGAATAAGGCCGA+GGG + tig0005653:13280-13299 Msa1342460:intergenic 30.0%
TATATATATGAATAAGGCCG+AGG + tig0005653:13281-13300 Msa1342460:intergenic 30.0%
TATGTGCATAAAGGAATGTT+GGG - tig0005653:13447-13466 Msa1342460:intron 30.0%
ATTAGAATTGTTTGTGCTCA+TGG - tig0005653:13676-13695 Msa1342460:intron 30.0%
! TATACATTTGCCCTTGTTAT+TGG - tig0005653:13703-13722 Msa1342460:intron 30.0%
AACAGGTTTACCAATAACAA+GGG + tig0005653:13716-13735 Msa1342460:intergenic 30.0%
AAACAGGTTTACCAATAACA+AGG + tig0005653:13717-13736 Msa1342460:intergenic 30.0%
CCCAAAAAAAGACATAAAAC+AGG + tig0005653:13733-13752 Msa1342460:intergenic 30.0%
TTATTTGCCTGACATATACT+AGG - tig0005653:13782-13801 Msa1342460:CDS 30.0%
CGTTAAACATGAGTTGTAAT+AGG - tig0005653:14106-14125 Msa1342460:intron 30.0%
! GCTTCAGTATTTTATCATCA+AGG - tig0005653:14213-14232 Msa1342460:intron 30.0%
TTAATCAAATATCATCCTGC+AGG - tig0005653:14256-14275 Msa1342460:intron 30.0%
!! GCTTGAGTTTGTTTACATTT+TGG - tig0005653:14377-14396 Msa1342460:intron 30.0%
CACATTTACAAATTGATGTC+GGG + tig0005653:14532-14551 Msa1342460:intergenic 30.0%
GCACATTTACAAATTGATGT+CGG + tig0005653:14533-14552 Msa1342460:intergenic 30.0%
!!! GTGCTGTAGTTTTTTACATA+CGG - tig0005653:14570-14589 Msa1342460:intron 30.0%
!! TCTTGATTTGCTCACTTTAT+AGG - tig0005653:14720-14739 Msa1342460:intron 30.0%
TTTATAGGAGCCAGATATAA+TGG - tig0005653:14735-14754 Msa1342460:intron 30.0%
! CTGTTTTACACTTTCAATCT+TGG + tig0005653:14844-14863 Msa1342460:intergenic 30.0%
! CAAGATTGAAAGTGTAAAAC+AGG - tig0005653:14842-14861 Msa1342460:intron 30.0%
! TGAAAGTGTAAAACAGGAAA+AGG - tig0005653:14848-14867 Msa1342460:intron 30.0%
TTCCAAATGTAAGTAGTAAG+GGG - tig0005653:14991-15010 Msa1342460:intron 30.0%
AGGAGTTCATTAATCTGAAA+AGG - tig0005653:15141-15160 Msa1342460:intron 30.0%
GGAGTTCATTAATCTGAAAA+GGG - tig0005653:15142-15161 Msa1342460:intron 30.0%
GAGTTCATTAATCTGAAAAG+GGG - tig0005653:15143-15162 Msa1342460:intron 30.0%
AGTTCATTAATCTGAAAAGG+GGG - tig0005653:15144-15163 Msa1342460:intron 30.0%
AAAATGGGAGTTTATAACAC+TGG - tig0005653:15227-15246 Msa1342460:intron 30.0%
GTTAGGTTAGTAAATCAGTT+AGG - tig0005653:15368-15387 Msa1342460:intron 30.0%
CCAAATCATAAGCATATGAA+AGG + tig0005653:15501-15520 Msa1342460:intergenic 30.0%
CCTTTCATATGCTTATGATT+TGG - tig0005653:15498-15517 Msa1342460:intron 30.0%
!! GAATTATGTTGGTAATGAGA+GGG + tig0005653:15534-15553 Msa1342460:intergenic 30.0%
!! GTAACTAACATTGACTTTCA+TGG - tig0005653:15649-15668 Msa1342460:intron 30.0%
TTGAGAAAGTAGTAAGTAAC+TGG + tig0005653:15827-15846 Msa1342460:intergenic 30.0%
TTGGAGATAAGATCAAATGA+AGG + tig0005653:15928-15947 Msa1342460:intergenic 30.0%
AAGACATGAAAACATGTGTT+TGG + tig0005653:15947-15966 Msa1342460:intergenic 30.0%
TCAGAAAACATTACCAGTAA+TGG - tig0005653:15967-15986 Msa1342460:intron 30.0%
ATTAGATGTGTTGCAATACA+AGG + tig0005653:16049-16068 Msa1342460:intergenic 30.0%
! ACAATAATCTACAAGGTGTT+CGG + tig0005653:16128-16147 Msa1342460:intergenic 30.0%
!! AAGAGTGTTAACAATTTGCT+TGG - tig0005653:16304-16323 Msa1342460:CDS 30.0%
!! ATACTAATTTTGGCAACTCA+TGG + tig0005653:16344-16363 Msa1342460:intergenic 30.0%
!! GTACAAGAGCATACTAATTT+TGG + tig0005653:16354-16373 Msa1342460:intergenic 30.0%
CTCTGATTTCTATTCACTTA+TGG - tig0005653:16474-16493 Msa1342460:CDS 30.0%
TGATTTCTATTCACTTATGG+TGG - tig0005653:16477-16496 Msa1342460:CDS 30.0%
ATGATTACTTGGTATAAGGA+CGG + tig0005653:16519-16538 Msa1342460:intergenic 30.0%
!!! AGCCATTTTTAAGAGTACAA+GGG + tig0005653:16551-16570 Msa1342460:intergenic 30.0%
!!! TAGCCATTTTTAAGAGTACA+AGG + tig0005653:16552-16571 Msa1342460:intergenic 30.0%
!! AGTATGATGATGGTATTTGG+TGG + tig0005653:6414-6433 Msa1200280:intergenic 35.0%
!! GGTAGTATGATGATGGTATT+TGG + tig0005653:6417-6436 Msa1200280:intergenic 35.0%
AATGAACGGTAGTATGATGA+TGG + tig0005653:6424-6443 Msa1200280:intergenic 35.0%
GAAATAGAGAGTTTAGACGA+GGG + tig0005653:6584-6603 Msa1342460:intergenic 35.0%
AGAAATAGAGAGTTTAGACG+AGG + tig0005653:6585-6604 Msa1342460:intergenic 35.0%
!! TGAAAAGCATTGATAGAGAG+AGG + tig0005653:6802-6821 Msa1342460:intergenic 35.0%
! ACTCAGAACAAATTAGTCTG+CGG - tig0005653:6935-6954 Msa1342460:intron 35.0%
GAAGTACGAGGGAATAATTT+GGG - tig0005653:6972-6991 Msa1342460:intron 35.0%
AAGTACGAGGGAATAATTTG+GGG - tig0005653:6973-6992 Msa1342460:intron 35.0%
GATTGGAATTCAGTGACTTT+AGG - tig0005653:6995-7014 Msa1342460:intron 35.0%
GGATTCAATGACGTTAGAAT+GGG + tig0005653:7043-7062 Msa1342460:intergenic 35.0%
AGGATTCAATGACGTTAGAA+TGG + tig0005653:7044-7063 Msa1342460:intergenic 35.0%
TTGAATCCTGATCCCTAATT+TGG - tig0005653:7055-7074 Msa1342460:CDS 35.0%
ATCATACCAAATTAGGGATC+AGG + tig0005653:7064-7083 Msa1342460:intergenic 35.0%
TATGAGGGATAACTTAACAG+TGG - tig0005653:7191-7210 Msa1342460:intron 35.0%
!! ATTTGTAGCTCTGATTTCTG+CGG - tig0005653:7235-7254 Msa1342460:intron 35.0%
AGAACATTCACTTAGATACC+GGG + tig0005653:7412-7431 Msa1342460:intergenic 35.0%
CAGAACATTCACTTAGATAC+CGG + tig0005653:7413-7432 Msa1342460:intergenic 35.0%
GGTATCTAAGTGAATGTTCT+GGG - tig0005653:7412-7431 Msa1342460:intron 35.0%
TACTGCATGGTTTATCTTGT+AGG - tig0005653:7438-7457 Msa1342460:intron 35.0%
ACTGCATGGTTTATCTTGTA+GGG - tig0005653:7439-7458 Msa1342460:intron 35.0%
AACAACTAGAATCCAAACAC+AGG + tig0005653:7615-7634 Msa1342460:intergenic 35.0%
! ATTATAGGGTGCCTCTATTA+TGG - tig0005653:7677-7696 Msa1342460:intron 35.0%
TATAGCCAATTGTATTGGAG+AGG + tig0005653:7731-7750 Msa1342460:intergenic 35.0%
TAACTGATACAAGACAGCTT+CGG + tig0005653:7919-7938 Msa1342460:intergenic 35.0%
TTTCCAACTTAAAAGCTCGA+CGG + tig0005653:8161-8180 Msa1342460:intergenic 35.0%
!!! TCGAGCTTTTAAGTTGGAAA+AGG - tig0005653:8161-8180 Msa1342460:intron 35.0%
! TTCTTACACCATACTTTTCC+AGG - tig0005653:8591-8610 Msa1342460:intron 35.0%
! TCTTACACCATACTTTTCCA+GGG - tig0005653:8592-8611 Msa1342460:intron 35.0%
CTGTAATAAATTCTTGGGGT+TGG + tig0005653:8637-8656 Msa1342460:intergenic 35.0%
CAACCCCAAGAATTTATTAC+AGG - tig0005653:8635-8654 Msa1342460:intron 35.0%
GGTAGTAAGATATAGAGAGA+TGG + tig0005653:8818-8837 Msa1342460:intergenic 35.0%
TATATCTTACTACCCTGCTA+CGG - tig0005653:8824-8843 Msa1342460:intron 35.0%
TGTAAATATCCAACGGCTTA+TGG - tig0005653:8940-8959 Msa1342460:intron 35.0%
AATTAAAGACCATAAGCCGT+TGG + tig0005653:8952-8971 Msa1342460:intergenic 35.0%
GACTATAAGAGCAATTGTGA+TGG + tig0005653:8986-9005 Msa1342460:intergenic 35.0%
AGTTGGCATACAGCAAAATA+TGG + tig0005653:9062-9081 Msa1342460:intergenic 35.0%
ATGCCAACTACATTATCAAG+TGG - tig0005653:9073-9092 Msa1342460:CDS 35.0%
!! ACACCACTTGATAATGTAGT+TGG + tig0005653:9079-9098 Msa1342460:intergenic 35.0%
GACGAAAGATAATGATTACC+TGG + tig0005653:9111-9130 Msa1342460:intergenic 35.0%
! CCACTCTTAAGTTTTTCTGT+AGG + tig0005653:9483-9502 Msa1342460:intergenic 35.0%
CCTACAGAAAAACTTAAGAG+TGG - tig0005653:9480-9499 Msa1342460:intron 35.0%
GAATCTTCTCGTAATCTTTG+CGG - tig0005653:9537-9556 Msa1342460:intron 35.0%
!! GAGTAATAAGGAAGTGTTAG+AGG + tig0005653:9721-9740 Msa1342460:intergenic 35.0%
AGTACATTTGGAAAGAATCC+TGG + tig0005653:9962-9981 Msa1342460:intergenic 35.0%
! ACGTTTGGATGTTTGTTAAC+TGG + tig0005653:10007-10026 Msa1342460:intergenic 35.0%
GCACAAAAAAATTGTCACTC+TGG + tig0005653:10077-10096 Msa1342460:intergenic 35.0%
!!! AGTGACAATTTTTTTGTGCG+TGG - tig0005653:10078-10097 Msa1342460:intron 35.0%
GAATCAGCTACAAACTGATA+AGG - tig0005653:10149-10168 Msa1342460:intron 35.0%
TATACAGCTTGGAAACTGTT+AGG - tig0005653:10220-10239 Msa1342460:intron 35.0%
!! AATTTCCAGCTTTTCAAGCT+AGG - tig0005653:10278-10297 Msa1342460:intron 35.0%
CAAGTTCCTATCATTTCAAC+TGG - tig0005653:10568-10587 Msa1342460:intron 35.0%
TCCTATCATTTCAACTGGTT+TGG - tig0005653:10573-10592 Msa1342460:intron 35.0%
ACCAAACCAGTTGAAATGAT+AGG + tig0005653:10577-10596 Msa1342460:intergenic 35.0%
AAATTTGTAGCTAGTGGAGT+TGG - tig0005653:10753-10772 Msa1342460:intron 35.0%
TTACCTTTCCCAAAATAAGG+GGG + tig0005653:10833-10852 Msa1342460:intergenic 35.0%
CATGAGTGATCTCAAAAGTT+AGG - tig0005653:11061-11080 Msa1342460:intron 35.0%
AAAGAGTTCTTGCATAAGTG+GGG + tig0005653:11126-11145 Msa1342460:intergenic 35.0%
CAAAGAGTTCTTGCATAAGT+GGG + tig0005653:11127-11146 Msa1342460:intergenic 35.0%
CACTTATGCAAGAACTCTTT+GGG - tig0005653:11126-11145 Msa1342460:intron 35.0%
GTGAATTTCGTCAAAAGGTT+TGG + tig0005653:11182-11201 Msa1342460:intergenic 35.0%
!!! CACGTGATAGCTTAGTTTTT+TGG + tig0005653:11294-11313 Msa1342460:intergenic 35.0%
CAAGTAATAGGCAACATGAT+TGG - tig0005653:11439-11458 Msa1342460:intron 35.0%
CAATAAGTGAGCCAATTTAC+TGG - tig0005653:11501-11520 Msa1342460:intron 35.0%
AAAGAAGAAAGTAGCAAGGT+AGG + tig0005653:11557-11576 Msa1342460:intergenic 35.0%
CAAGAAAGAAGAAAGTAGCA+AGG + tig0005653:11561-11580 Msa1342460:intergenic 35.0%
ATATATGGAGTTGTAAACCC+TGG - tig0005653:11661-11680 Msa1342460:intron 35.0%
TGACACAATGGTCAAATATG+AGG + tig0005653:12047-12066 Msa1342460:intergenic 35.0%
CAAACTTTCACTTGACACAA+TGG + tig0005653:12059-12078 Msa1342460:intergenic 35.0%
! GACGCCTCTTTAAAAATATG+GGG - tig0005653:12234-12253 Msa1342460:intron 35.0%
ACTAACGAAGTCTACATTCA+GGG - tig0005653:12364-12383 Msa1342460:intron 35.0%
TCAGGGACTAAATTGACTAA+CGG - tig0005653:12381-12400 Msa1342460:intron 35.0%
GACTAACAAAGTCTACATTC+AGG - tig0005653:12427-12446 Msa1342460:intron 35.0%
! AATTTCCAAGAGAGGTTGAT+AGG - tig0005653:12558-12577 Msa1342460:intron 35.0%
CTAATCACATACGCAAACAT+GGG + tig0005653:12756-12775 Msa1342460:intergenic 35.0%
CATGTTTGCGTATGTGATTA+GGG - tig0005653:12755-12774 Msa1342460:intron 35.0%
TAGCCAACTTAATCTCTCTT+TGG + tig0005653:12847-12866 Msa1342460:intergenic 35.0%
AATAAGGAAGAGAGATTAGG+GGG - tig0005653:12916-12935 Msa1342460:intron 35.0%
ACAAAGAAACCAAAGACCAA+TGG + tig0005653:12954-12973 Msa1342460:intergenic 35.0%
! TTTTAGATGAGACCGAATGA+TGG + tig0005653:13040-13059 Msa1342460:intergenic 35.0%
! CCAAAGTATTCAAGAGACTT+TGG + tig0005653:13137-13156 Msa1342460:intergenic 35.0%
CCAAAGTCTCTTGAATACTT+TGG - tig0005653:13134-13153 Msa1342460:intron 35.0%
TATATATGAATAAGGCCGAG+GGG + tig0005653:13279-13298 Msa1342460:intergenic 35.0%
ATCTATATACGGGATGGTAA+AGG + tig0005653:13368-13387 Msa1342460:intergenic 35.0%
CTGTATATCTATATACGGGA+TGG + tig0005653:13374-13393 Msa1342460:intergenic 35.0%
ACCAGAAAGTTTGTACGTTA+AGG + tig0005653:13404-13423 Msa1342460:intergenic 35.0%
GTATGTGCATAAAGGAATGT+TGG - tig0005653:13446-13465 Msa1342460:intron 35.0%
TCGTATCATCACATTCACAA+TGG + tig0005653:13603-13622 Msa1342460:intergenic 35.0%
TTAGACTCCTAGTATATGTC+AGG + tig0005653:13792-13811 Msa1342460:intergenic 35.0%
ATGTAGTCAAGTCTATGTAG+TGG - tig0005653:14151-14170 Msa1342460:intron 35.0%
TGTAGTCAAGTCTATGTAGT+GGG - tig0005653:14152-14171 Msa1342460:intron 35.0%
! TTTTCTTGTAGCTATTGGAC+TGG - tig0005653:14337-14356 Msa1342460:intron 35.0%
TTTCTTGTAGCTATTGGACT+GGG - tig0005653:14338-14357 Msa1342460:intron 35.0%
ATGTAAAAAACTACAGCACC+AGG + tig0005653:14569-14588 Msa1342460:intergenic 35.0%
TCCAAATGTAAGTAGTAAGG+GGG - tig0005653:14992-15011 Msa1342460:intron 35.0%
AATGAGCTAGAAGATTTGAC+TGG - tig0005653:15016-15035 Msa1342460:intron 35.0%
AAGACTGTTAGGTTCTTGAA+TGG + tig0005653:15113-15132 Msa1342460:intergenic 35.0%
! CCTTGTTATCTAAGACTGTT+AGG + tig0005653:15124-15143 Msa1342460:intergenic 35.0%
CCTAACAGTCTTAGATAACA+AGG - tig0005653:15121-15140 Msa1342460:intron 35.0%
AGTTATGTCATCAGTGTTAC+TGG - tig0005653:15184-15203 Msa1342460:intron 35.0%
AAGGATGCTATTCTTAGGAT+TGG - tig0005653:15338-15357 Msa1342460:intron 35.0%
! ATGCTATTCTTAGGATTGGT+TGG - tig0005653:15342-15361 Msa1342460:intron 35.0%
!! TTAGGATTGGTTGGTTAGTT+AGG - tig0005653:15351-15370 Msa1342460:intron 35.0%
GAAAAGAACACAAGATCTGA+AGG + tig0005653:15479-15498 Msa1342460:intergenic 35.0%
!! CGAATTATGTTGGTAATGAG+AGG + tig0005653:15535-15554 Msa1342460:intergenic 35.0%
ACCAACATAATTCGTTAGAG+CGG - tig0005653:15541-15560 Msa1342460:intron 35.0%
GCACTAGTGTGCAATTTAAT+TGG - tig0005653:15576-15595 Msa1342460:CDS 35.0%
TTAGTTACCATAACTCATGC+TGG + tig0005653:15637-15656 Msa1342460:intergenic 35.0%
ACTTCTTCATCTGACCTTAT+TGG - tig0005653:15682-15701 Msa1342460:intron 35.0%
TATTCAATAGCATTGCTGTC+CGG - tig0005653:15705-15724 Msa1342460:intron 35.0%
CAGAGATAATTGAAAGACTC+CGG + tig0005653:15727-15746 Msa1342460:intergenic 35.0%
AGTCTTTCAATTATCTCTGG+TGG - tig0005653:15728-15747 Msa1342460:intron 35.0%
AACATTACCAGTAATGGTAG+CGG - tig0005653:15973-15992 Msa1342460:intron 35.0%
TATTGCAACACATCTAATCC+AGG - tig0005653:16051-16070 Msa1342460:intron 35.0%
! CAATAATCTACAAGGTGTTC+GGG + tig0005653:16127-16146 Msa1342460:intergenic 35.0%
GAACACCTTGTAGATTATTG+TGG - tig0005653:16127-16146 Msa1342460:intron 35.0%
AGAGTCCACAATAATCTACA+AGG + tig0005653:16135-16154 Msa1342460:intergenic 35.0%
! TCATCATTGATTGTCATCTG+TGG - tig0005653:16233-16252 Msa1342460:intron 35.0%
CTCTTGTACATTGTTCATTC+TGG - tig0005653:16365-16384 Msa1342460:CDS 35.0%
AAAGATCGGAAACAATATGC+TGG + tig0005653:16400-16419 Msa1342460:intergenic 35.0%
!! GACGGACTGAAAATAAAGAT+CGG + tig0005653:16414-16433 Msa1342460:intergenic 35.0%
TATTGAACTATATGCTGGGA+CGG + tig0005653:16432-16451 Msa1342460:intergenic 35.0%
GTCCCTTGTACTCTTAAAAA+TGG - tig0005653:16546-16565 Msa1342460:exon 35.0%
TCAGAAAAGCCAATAATGAG+TGG + tig0005653:16584-16603 Msa1342460:intergenic 35.0%
!! TGATGATGGTATTTGGTGGT+GGG + tig0005653:6410-6429 Msa1200280:intergenic 40.0%
!! ATGATGATGGTATTTGGTGG+TGG + tig0005653:6411-6430 Msa1200280:intergenic 40.0%
TAGAGTAAGGGATTTAACGG+CGG + tig0005653:6637-6656 Msa1342460:intergenic 40.0%
GCGTAGAGTAAGGGATTTAA+CGG + tig0005653:6640-6659 Msa1342460:intergenic 40.0%
AGTGGAAGCAAAGAGTCAAA+AGG - tig0005653:6717-6736 Msa1342460:three_prime_UTR 40.0%
AAGAGTCAAAAGGATTGAGC+TGG - tig0005653:6727-6746 Msa1342460:three_prime_UTR 40.0%
AGAGTCAAAAGGATTGAGCT+GGG - tig0005653:6728-6747 Msa1342460:three_prime_UTR 40.0%
! AACCCATTTTGAGCTTTGCT+AGG - tig0005653:6754-6773 Msa1342460:three_prime_UTR 40.0%
! ACCCATTTTGAGCTTTGCTA+GGG - tig0005653:6755-6774 Msa1342460:three_prime_UTR 40.0%
!! GTCTGCGGACTAATTTGTTA+TGG - tig0005653:6950-6969 Msa1342460:intron 40.0%
! GGAAGTACGAGGGAATAATT+TGG - tig0005653:6971-6990 Msa1342460:intron 40.0%
GGATTAACATGTCCTAGTCT+TGG - tig0005653:7266-7285 Msa1342460:intron 40.0%
! AATTCCAAACGGCCCAATTT+TGG + tig0005653:7318-7337 Msa1342460:intergenic 40.0%
CGGTATCTAAGTGAATGTTC+TGG - tig0005653:7411-7430 Msa1342460:intron 40.0%
CATGGTTTATCTTGTAGGGT+TGG - tig0005653:7443-7462 Msa1342460:intron 40.0%
CAGGCACATCAATCAAATCT+AGG + tig0005653:7596-7615 Msa1342460:intergenic 40.0%
TTGATTGATGTGCCTGTGTT+TGG - tig0005653:7600-7619 Msa1342460:intron 40.0%
! TGCTTGGACCCTTTAAAAAG+AGG + tig0005653:7704-7723 Msa1342460:intergenic 40.0%
!! CTTTTTAAAGGGTCCAAGCA+TGG - tig0005653:7704-7723 Msa1342460:intron 40.0%
ATGGACCTCTCCAATACAAT+TGG - tig0005653:7723-7742 Msa1342460:intron 40.0%
CACACTACATGTAGAAGAAG+CGG + tig0005653:7802-7821 Msa1342460:intergenic 40.0%
TTCCAACTTAAAAGCTCGAC+GGG + tig0005653:8160-8179 Msa1342460:intergenic 40.0%
GGAAAAGGCGAAGTAATGAA+TGG - tig0005653:8176-8195 Msa1342460:intron 40.0%
AGTCATGTGAAACCAAGAGA+TGG + tig0005653:8384-8403 Msa1342460:intergenic 40.0%
!! AACTTAAGAGTGGCTTGCTT+AGG - tig0005653:9490-9509 Msa1342460:intron 40.0%
CTTGGGAGTAAGAAGATGAA+AGG - tig0005653:9515-9534 Msa1342460:intron 40.0%
CTCGAACTTTCGGAGTAATA+AGG + tig0005653:9733-9752 Msa1342460:intergenic 40.0%
ACTTGAAGCTCTCGAACTTT+CGG + tig0005653:9743-9762 Msa1342460:intergenic 40.0%
TTCTCTGCTACTGTTACGTT+TGG + tig0005653:10022-10041 Msa1342460:intergenic 40.0%
AAACGTAACAGTAGCAGAGA+AGG - tig0005653:10021-10040 Msa1342460:intron 40.0%
AACGTAACAGTAGCAGAGAA+GGG - tig0005653:10022-10041 Msa1342460:intron 40.0%
AAACTGTTAGGACGAACCTT+TGG - tig0005653:10232-10251 Msa1342460:intron 40.0%
AAAGCTGCCAACTATACCAA+AGG + tig0005653:10251-10270 Msa1342460:intergenic 40.0%
!!! AATCCCCCTTATTTTGGGAA+AGG - tig0005653:10827-10846 Msa1342460:intron 40.0%
! ATATCATGAAAGTGCGTGAG+TGG - tig0005653:11086-11105 Msa1342460:intron 40.0%
CCAAAGAGTTCTTGCATAAG+TGG + tig0005653:11128-11147 Msa1342460:intergenic 40.0%
CCACTTATGCAAGAACTCTT+TGG - tig0005653:11125-11144 Msa1342460:intron 40.0%
! ATTTCAGAGTTTGCTCCTTG+TGG + tig0005653:11228-11247 Msa1342460:intergenic 40.0%
! TTTCATTGCTTTGAATGGGC+AGG - tig0005653:11789-11808 Msa1342460:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - tig0005653:12260-12279 Msa1342460:CDS 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - tig0005653:12261-12280 Msa1342460:CDS 40.0%
GACTAACGAAGTCTACATTC+AGG - tig0005653:12363-12382 Msa1342460:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + tig0005653:12261-12280 Msa1342460:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + tig0005653:12260-12279 Msa1342460:intergenic 40.0%
TAAAGCCTATCAACCTCTCT+TGG + tig0005653:12566-12585 Msa1342460:intergenic 40.0%
CCTAATCACATACGCAAACA+TGG + tig0005653:12757-12776 Msa1342460:intergenic 40.0%
CCATGTTTGCGTATGTGATT+AGG - tig0005653:12754-12773 Msa1342460:intron 40.0%
AGGCACATGGCCTATAAATA+AGG - tig0005653:12900-12919 Msa1342460:intron 40.0%
! GTATAGACTTGTGGCCTTTT+AGG - tig0005653:13099-13118 Msa1342460:intron 40.0%
!!! TTGTGGCCTTTTAGGATTTG+AGG - tig0005653:13107-13126 Msa1342460:intron 40.0%
GGACTTCCTCAAATCCTAAA+AGG + tig0005653:13116-13135 Msa1342460:intergenic 40.0%
ATATATGAATAAGGCCGAGG+GGG + tig0005653:13278-13297 Msa1342460:intergenic 40.0%
GCCTTAACGTACAAACTTTC+TGG - tig0005653:13400-13419 Msa1342460:intron 40.0%
GAAGCAGCAATGTAGCATAT+AGG + tig0005653:13484-13503 Msa1342460:intergenic 40.0%
! AGGAATGTCTTGCTCTCTTT+TGG - tig0005653:13831-13850 Msa1342460:intron 40.0%
! AGAAACCGTAAGCTTTTCTC+AGG - tig0005653:13981-14000 Msa1342460:CDS 40.0%
! GAAACCGTAAGCTTTTCTCA+GGG - tig0005653:13982-14001 Msa1342460:CDS 40.0%
TGATCCCTGAGAAAAGCTTA+CGG + tig0005653:13989-14008 Msa1342460:intergenic 40.0%
!!! CAGTGCATTTTTTCTTAGCC+TGG - tig0005653:14007-14026 Msa1342460:CDS 40.0%
!!! GCATTTTTTCTTAGCCTGGT+AGG - tig0005653:14011-14030 Msa1342460:CDS 40.0%
!! TATGTAGTGGGAGAAGGTTT+TGG - tig0005653:14164-14183 Msa1342460:intron 40.0%
GTAAACAAACTCAAGCATGC+TGG + tig0005653:14373-14392 Msa1342460:intergenic 40.0%
!! TGCTCACTTTAGAGTAGTTG+TGG + tig0005653:14597-14616 Msa1342460:intergenic 40.0%
! TCTAAAGTGAGCACTCACTT+TGG - tig0005653:14604-14623 Msa1342460:intron 40.0%
!! TTTATGGGGGTGTTTCTGTT+AGG - tig0005653:14800-14819 Msa1342460:intron 40.0%
AACTTGGTATGAGTCCTGTT+TGG - tig0005653:14887-14906 Msa1342460:intron 40.0%
TATGAGTCCTGTTTGGTTAG+TGG - tig0005653:14894-14913 Msa1342460:intron 40.0%
ATAACAGCCACTAACCAAAC+AGG + tig0005653:14904-14923 Msa1342460:intergenic 40.0%
GTGGCAGTTGTGTTAGTTAA+AGG - tig0005653:14966-14985 Msa1342460:intron 40.0%
CCAAATGTAAGTAGTAAGGG+GGG - tig0005653:14993-15012 Msa1342460:intron 40.0%
CCAACATAATTCGTTAGAGC+GGG - tig0005653:15542-15561 Msa1342460:intron 40.0%
AGAACATCCAGCATGAGTTA+TGG - tig0005653:15627-15646 Msa1342460:intron 40.0%
CGGAGTCTTTCAATTATCTC+TGG - tig0005653:15725-15744 Msa1342460:intron 40.0%
GTTTCAGTTTGCGACATAAG+AGG - tig0005653:15868-15887 Msa1342460:intron 40.0%
TCTATAACCGCTACCATTAC+TGG + tig0005653:15983-16002 Msa1342460:intergenic 40.0%
ATTTGGAGAATCTGGGTTAC+TGG - tig0005653:16018-16037 Msa1342460:intron 40.0%
AGACAATACCGGTAATGTCA+AGG - tig0005653:16181-16200 Msa1342460:intron 40.0%
TTAAGCCACCTTGACATTAC+CGG + tig0005653:16192-16211 Msa1342460:intergenic 40.0%
! TCATCTGTGGATTGATATGC+TGG - tig0005653:16246-16265 Msa1342460:intron 40.0%
!! CTAATTTTGGCAACTCATGG+TGG + tig0005653:16341-16360 Msa1342460:intergenic 40.0%
TCGGAAACAATATGCTGGAA+CGG + tig0005653:16395-16414 Msa1342460:intergenic 40.0%
GGACTGCTTACATGATTACT+TGG + tig0005653:16530-16549 Msa1342460:intergenic 40.0%
AGACATCCACCACTCATTAT+TGG - tig0005653:16572-16591 Msa1342460:five_prime_UTR 40.0%
GAAAAGCCAATAATGAGTGG+TGG + tig0005653:16581-16600 Msa1342460:intergenic 40.0%
TACTACCGTTCATTTCGCGT+TGG - tig0005653:6430-6449 Msa1342460:three_prime_UTR 45.0%
CAGTACCAACGCGAAATGAA+CGG + tig0005653:6438-6457 Msa1342460:intergenic 45.0%
CTGAACTAGGCAGACTGTAA+TGG + tig0005653:6487-6506 Msa1342460:intergenic 45.0%
AGAGTTTAGACGAGGGAATG+AGG + tig0005653:6577-6596 Msa1342460:intergenic 45.0%
GATTGAGCACATGGTCTGAA+GGG + tig0005653:6675-6694 Msa1342460:intergenic 45.0%
CCCCTAGCAAAGCTCAAAAT+GGG + tig0005653:6759-6778 Msa1342460:intergenic 45.0%
! CCCATTTTGAGCTTTGCTAG+GGG - tig0005653:6756-6775 Msa1342460:three_prime_UTR 45.0%
!! TGATAGAGAGAGGCACCTAA+GGG + tig0005653:6792-6811 Msa1342460:intergenic 45.0%
!! TTGATAGAGAGAGGCACCTA+AGG + tig0005653:6793-6812 Msa1342460:intergenic 45.0%
CGAGGGAATAATTTGGGGAT+TGG - tig0005653:6978-6997 Msa1342460:intron 45.0%
! GGAATTCAGTGACTTTAGGG+CGG - tig0005653:6999-7018 Msa1342460:intron 45.0%
!! GAATTCAGTGACTTTAGGGC+GGG - tig0005653:7000-7019 Msa1342460:intron 45.0%
TGGGCTGCAAGATAATTGTG+AGG - tig0005653:7103-7122 Msa1342460:intron 45.0%
GTATCCAAAATTGGGCCGTT+TGG - tig0005653:7311-7330 Msa1342460:CDS 45.0%
! ATGTTCTGGGTTCTACTGCA+TGG - tig0005653:7425-7444 Msa1342460:intron 45.0%
GTGTTGCGAAGCGAAGAAAT+TGG - tig0005653:7465-7484 Msa1342460:intron 45.0%
CGGGCTATAGCCAATTGTAT+TGG + tig0005653:7736-7755 Msa1342460:intergenic 45.0%
ATGTAGAAGAAGCGGTGGAA+AGG + tig0005653:7794-7813 Msa1342460:intergenic 45.0%
ACTACATGTAGAAGAAGCGG+TGG + tig0005653:7799-7818 Msa1342460:intergenic 45.0%
TCCAACTTAAAAGCTCGACG+GGG + tig0005653:8159-8178 Msa1342460:intergenic 45.0%
AGGCGAAGTAATGAATGGAG+TGG - tig0005653:8181-8200 Msa1342460:intron 45.0%
GGCCGTGCTATCATAATTCT+TGG - tig0005653:8845-8864 Msa1342460:intron 45.0%
TCTAGCACTTGCAATGCAGT+TGG - tig0005653:9190-9209 Msa1342460:intron 45.0%
AGCAAGCTGCAGAATCAAAG+TGG + tig0005653:9233-9252 Msa1342460:intergenic 45.0%
ACTTTGATTCTGCAGCTTGC+TGG - tig0005653:9232-9251 Msa1342460:intron 45.0%
!! AGTGGCTTGCTTAGGATCTT+GGG - tig0005653:9498-9517 Msa1342460:intron 45.0%
TGGACTTGAAACACGACTCT+AGG - tig0005653:9681-9700 Msa1342460:intron 45.0%
GTTTCTTAGTCACTGCCATC+AGG - tig0005653:9926-9945 Msa1342460:intron 45.0%
AGTCACTGCCATCAGGATTA+TGG - tig0005653:9933-9952 Msa1342460:intron 45.0%
CCTGGTTTCCATAATCCTGA+TGG + tig0005653:9944-9963 Msa1342460:intergenic 45.0%
CCATCAGGATTATGGAAACC+AGG - tig0005653:9941-9960 Msa1342460:intron 45.0%
! TGTTTGATTCGATCGATCGG+AGG + tig0005653:10191-10210 Msa1342460:intergenic 45.0%
GGACGAACCTTTGGTATAGT+TGG - tig0005653:10241-10260 Msa1342460:intron 45.0%
TGGTATAGTTGGCAGCTTTG+TGG - tig0005653:10252-10271 Msa1342460:intron 45.0%
! GTTAGCCTAGCTTGAAAAGC+TGG + tig0005653:10286-10305 Msa1342460:intergenic 45.0%
GAAACCTAGCAGTAAGCTCA+TGG + tig0005653:10929-10948 Msa1342460:intergenic 45.0%
ACACTTAGAAGAATGGGCCT+GGG - tig0005653:11200-11219 Msa1342460:intron 45.0%
ATAGGCAACATGATTGGGCA+AGG - tig0005653:11445-11464 Msa1342460:intron 45.0%
TAGGCAACATGATTGGGCAA+GGG - tig0005653:11446-11465 Msa1342460:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - tig0005653:12262-12281 Msa1342460:CDS 45.0%
TATGCAAAACAGTCCCTGCA+TGG - tig0005653:12320-12339 Msa1342460:CDS 45.0%
TCCCTGCATGGTCAATTTCA+GGG - tig0005653:12332-12351 Msa1342460:CDS 45.0%
TCCCTGAAATTGACCATGCA+GGG + tig0005653:12336-12355 Msa1342460:intergenic 45.0%
ACTAACGGAGTCTGCATTCA+GGG - tig0005653:12396-12415 Msa1342460:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + tig0005653:12262-12281 Msa1342460:intergenic 45.0%
CGTATGTGATTAGGGTTCAC+AGG - tig0005653:12763-12782 Msa1342460:intron 45.0%
ATGTGATTAGGGTTCACAGG+AGG - tig0005653:12766-12785 Msa1342460:intron 45.0%
AGAGATTAGGGGGTTCACTT+AGG - tig0005653:12926-12945 Msa1342460:intron 45.0%
!! ACTTAGGTGCCATTGGTCTT+TGG - tig0005653:12942-12961 Msa1342460:intron 45.0%
!!! CCATTGGCTTTTGGTGTCAT+TGG + tig0005653:13076-13095 Msa1342460:intergenic 45.0%
CCAATGACACCAAAAGCCAA+TGG - tig0005653:13073-13092 Msa1342460:intron 45.0%
!!! CTATACGTGCCATTGGCTTT+TGG + tig0005653:13085-13104 Msa1342460:intergenic 45.0%
CACAAGTCTATACGTGCCAT+TGG + tig0005653:13092-13111 Msa1342460:intergenic 45.0%
CAATGGCACGTATAGACTTG+TGG - tig0005653:13090-13109 Msa1342460:intron 45.0%
!! TCACTTTCACTTTTCCCCCT+CGG - tig0005653:13261-13280 Msa1342460:intron 45.0%
!!! TTTTTGGGTGTTCAGCTGAC+AGG - tig0005653:13745-13764 Msa1342460:intron 45.0%
GAAGGAAGCAAATTCCTACC+AGG + tig0005653:14028-14047 Msa1342460:intergenic 45.0%
! CAAGTCTATGTAGTGGGAGA+AGG - tig0005653:14158-14177 Msa1342460:intron 45.0%
!! TAGTGGGAGAAGGTTTTGGT+GGG - tig0005653:14168-14187 Msa1342460:intron 45.0%
ATATCATCCTGCAGGTACCT+TGG - tig0005653:14264-14283 Msa1342460:intron 45.0%
! GACTTGCTCACTTGTATCCA+AGG + tig0005653:14284-14303 Msa1342460:intergenic 45.0%
GGATACAAGTGAGCAAGTCA+AGG - tig0005653:14285-14304 Msa1342460:intron 45.0%
TAACTAACACAACTGCCACG+CGG + tig0005653:14965-14984 Msa1342460:intergenic 45.0%
CCCCCCTTACTACTTACATT+TGG + tig0005653:14996-15015 Msa1342460:intergenic 45.0%
TTGACTGGATTACCAGTGTG+AGG - tig0005653:15031-15050 Msa1342460:intron 45.0%
TGAGGAGAGCTATTCTCTCT+TGG - tig0005653:15049-15068 Msa1342460:intron 45.0%
GAGGAGAGCTATTCTCTCTT+GGG - tig0005653:15050-15069 Msa1342460:intron 45.0%
!! TTGGTAATGAGAGGGTGTCA+TGG + tig0005653:15526-15545 Msa1342460:intergenic 45.0%
CCCGCTCTAACGAATTATGT+TGG + tig0005653:15545-15564 Msa1342460:intergenic 45.0%
!! TGCGTTGGCATTTTCTTCAC+GGG + tig0005653:15771-15790 Msa1342460:intergenic 45.0%
!! GTGCGTTGGCATTTTCTTCA+CGG + tig0005653:15772-15791 Msa1342460:intergenic 45.0%
TGCAACTAGTATGAGTGCGT+TGG + tig0005653:15786-15805 Msa1342460:intergenic 45.0%
ACTCATACTAGTTGCAAGCC+AGG - tig0005653:15790-15809 Msa1342460:CDS 45.0%
TAACTGGTTGAGCTTTCACC+TGG + tig0005653:15811-15830 Msa1342460:intergenic 45.0%
TCTCCAAATGCACCACAAAG+TGG + tig0005653:16007-16026 Msa1342460:intergenic 45.0%
TGTGGTGCATTTGGAGAATC+TGG - tig0005653:16010-16029 Msa1342460:intron 45.0%
GTGGTGCATTTGGAGAATCT+GGG - tig0005653:16011-16030 Msa1342460:intron 45.0%
ATGCGTCGCAAAGACAATAC+CGG - tig0005653:16170-16189 Msa1342460:intron 45.0%
CAATACCGGTAATGTCAAGG+TGG - tig0005653:16184-16203 Msa1342460:intron 45.0%
ATGTCAAGGTGGCTTAAGAG+AGG - tig0005653:16195-16214 Msa1342460:intron 45.0%
GAAACACATCATGCTGCACA+TGG - tig0005653:16277-16296 Msa1342460:intron 45.0%
!! TATATATATATATATGAATA+AGG + tig0005653:13287-13306 Msa1342460:intergenic 5.0%
!! AAAAAAAAAAAAGATTTAAA+TGG - tig0005653:14078-14097 Msa1342460:intron 5.0%
CGTGAGGATGAGTAAATGGG+CGG + tig0005653:6544-6563 Msa1342460:intergenic 50.0%
CGGCGTGAGGATGAGTAAAT+GGG + tig0005653:6547-6566 Msa1342460:intergenic 50.0%
CGAGGGAATGAGGAAGAATG+CGG + tig0005653:6567-6586 Msa1342460:intergenic 50.0%
GGATTGAGCACATGGTCTGA+AGG + tig0005653:6676-6695 Msa1342460:intergenic 50.0%
ACCATGTGCTCAATCCCATC+AGG - tig0005653:6680-6699 Msa1342460:three_prime_UTR 50.0%
CCATGTGCTCAATCCCATCA+GGG - tig0005653:6681-6700 Msa1342460:three_prime_UTR 50.0%
ACCACTACCATCTCCCTGAT+GGG + tig0005653:6697-6716 Msa1342460:intergenic 50.0%
TACCACTACCATCTCCCTGA+TGG + tig0005653:6698-6717 Msa1342460:intergenic 50.0%
GCCCCTAGCAAAGCTCAAAA+TGG + tig0005653:6760-6779 Msa1342460:intergenic 50.0%
AGGGGCAATGTCTTACCCTT+AGG - tig0005653:6774-6793 Msa1342460:three_prime_UTR 50.0%
TTAGGGCGGGAAAGTCAAGT+TGG - tig0005653:7013-7032 Msa1342460:intron 50.0%
CTGATTTCTGCGGTGACGTT+AGG - tig0005653:7245-7264 Msa1342460:intron 50.0%
TCAACAGCGCAACCAAGACT+AGG + tig0005653:7281-7300 Msa1342460:intergenic 50.0%
TTGGTGCAGCTGTAGAAGCA+TGG - tig0005653:7484-7503 Msa1342460:intron 50.0%
! CTGTAGAAGCATGGCCTGTT+GGG - tig0005653:7493-7512 Msa1342460:intron 50.0%
GTATTGGAGAGGTCCATGCT+TGG + tig0005653:7720-7739 Msa1342460:intergenic 50.0%
AGCTTCGGCAACAGAAAGTC+GGG + tig0005653:7904-7923 Msa1342460:intergenic 50.0%
CAGCTTCGGCAACAGAAAGT+CGG + tig0005653:7905-7924 Msa1342460:intergenic 50.0%
!! ACCCCGTCGAGCTTTTAAGT+TGG - tig0005653:8155-8174 Msa1342460:intron 50.0%
!! AAGTGGTGTTGCACTTACCC+AGG - tig0005653:9090-9109 Msa1342460:CDS 50.0%
TGCTGGAGCAAATACTGCAC+TGG - tig0005653:9249-9268 Msa1342460:intron 50.0%
!! GAGTGGCTTGCTTAGGATCT+TGG - tig0005653:9497-9516 Msa1342460:intron 50.0%
TGATTCGATCGATCGGAGGA+GGG + tig0005653:10187-10206 Msa1342460:intergenic 50.0%
! TTGATTCGATCGATCGGAGG+AGG + tig0005653:10188-10207 Msa1342460:intergenic 50.0%
AGCAGTAAGCTCATGGAAGG+AGG + tig0005653:10922-10941 Msa1342460:intergenic 50.0%
CCTAGCAGTAAGCTCATGGA+AGG + tig0005653:10925-10944 Msa1342460:intergenic 50.0%
CCTTCCATGAGCTTACTGCT+AGG - tig0005653:10922-10941 Msa1342460:intron 50.0%
CACACTTAGAAGAATGGGCC+TGG - tig0005653:11199-11218 Msa1342460:intron 50.0%
CACTTAGAAGAATGGGCCTG+GGG - tig0005653:11201-11220 Msa1342460:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + tig0005653:12488-12507 Msa1342460:intergenic 50.0%
TGACGAATCGTTCCCCATTC+AGG + tig0005653:12487-12506 Msa1342460:intergenic 50.0%
GTCCCTGCATGGTCAATTTC+AGG - tig0005653:12331-12350 Msa1342460:CDS 50.0%
GTCCCTGAAATTGACCATGC+AGG + tig0005653:12337-12356 Msa1342460:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG - tig0005653:12395-12414 Msa1342460:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG - tig0005653:12487-12506 Msa1342460:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG - tig0005653:12488-12507 Msa1342460:intron 50.0%
GTCAATCACGCCTCTATAGC+AGG - tig0005653:12646-12665 Msa1342460:intron 50.0%
TCTGCCATAGCCTGCTATAG+AGG + tig0005653:12659-12678 Msa1342460:intergenic 50.0%
TATAGCAGGCTATGGCAGAG+CGG - tig0005653:12660-12679 Msa1342460:intron 50.0%
AATAGGTGTGGCTGTCACAG+CGG - tig0005653:12726-12745 Msa1342460:intron 50.0%
!! GTAGTGGGAGAAGGTTTTGG+TGG - tig0005653:14167-14186 Msa1342460:intron 50.0%
! CTTGTATCCAAGGTACCTGC+AGG + tig0005653:14274-14293 Msa1342460:intergenic 50.0%
AACTAACACAACTGCCACGC+GGG + tig0005653:14964-14983 Msa1342460:intergenic 50.0%
GAGAATAGCTCTCCTCACAC+TGG + tig0005653:15046-15065 Msa1342460:intergenic 50.0%
TTCGTTAGAGCGGGTATTCG+AGG - tig0005653:15551-15570 Msa1342460:intron 50.0%
TCGTTAGAGCGGGTATTCGA+GGG - tig0005653:15552-15571 Msa1342460:intron 50.0%
! GCGGTTATAGAGCCACTTTG+TGG - tig0005653:15992-16011 Msa1342460:intron 50.0%
! GAGCCACTTTGTGGTGCATT+TGG - tig0005653:16001-16020 Msa1342460:intron 50.0%
!! AAGGTGTTCGGGTTAGCATG+AGG + tig0005653:16116-16135 Msa1342460:intergenic 50.0%
GAGGATGAGTAAATGGGCGG+TGG + tig0005653:6541-6560 Msa1342460:intergenic 55.0%
GCGGCGTGAGGATGAGTAAA+TGG + tig0005653:6548-6567 Msa1342460:intergenic 55.0%
ATGAGGAAGAATGCGGCGTG+AGG + tig0005653:6560-6579 Msa1342460:intergenic 55.0%
CACATGGTCTGAAGGGAGTG+GGG + tig0005653:6668-6687 Msa1342460:intergenic 55.0%
GCACATGGTCTGAAGGGAGT+GGG + tig0005653:6669-6688 Msa1342460:intergenic 55.0%
AGCACATGGTCTGAAGGGAG+TGG + tig0005653:6670-6689 Msa1342460:intergenic 55.0%
CCCTGATGGGATTGAGCACA+TGG + tig0005653:6684-6703 Msa1342460:intergenic 55.0%
GCTCAATCCCATCAGGGAGA+TGG - tig0005653:6687-6706 Msa1342460:three_prime_UTR 55.0%
TCCCATCAGGGAGATGGTAG+TGG - tig0005653:6693-6712 Msa1342460:three_prime_UTR 55.0%
!! CAGGGAGATGGTAGTGGTAG+TGG - tig0005653:6699-6718 Msa1342460:three_prime_UTR 55.0%
! GCTGTAGAAGCATGGCCTGT+TGG - tig0005653:7492-7511 Msa1342460:intron 55.0%
CATGGCCTGTTGGGCTCTTT+GGG - tig0005653:7502-7521 Msa1342460:intron 55.0%
ACTAGCCCAAAGAGCCCAAC+AGG + tig0005653:7510-7529 Msa1342460:intergenic 55.0%
ATGATAGCACGGCCGTAGCA+GGG + tig0005653:8839-8858 Msa1342460:intergenic 55.0%
TATGATAGCACGGCCGTAGC+AGG + tig0005653:8840-8859 Msa1342460:intergenic 55.0%
CACGCCTCTATAGCAGGCTA+TGG - tig0005653:12652-12671 Msa1342460:intron 55.0%
!! ACTGGTGGAAGGTGTTGCAC+AGG + tig0005653:12695-12714 Msa1342460:intergenic 55.0%
TATTGAGCGTGGCTCACTGG+TGG + tig0005653:12710-12729 Msa1342460:intergenic 55.0%
ACCAGTGAGCCACGCTCAAT+AGG - tig0005653:12709-12728 Msa1342460:intron 55.0%
ACCTATTGAGCGTGGCTCAC+TGG + tig0005653:12713-12732 Msa1342460:intergenic 55.0%
TGAGCCACGCTCAATAGGTG+TGG - tig0005653:12714-12733 Msa1342460:intron 55.0%
ACAGCCACACCTATTGAGCG+TGG + tig0005653:12721-12740 Msa1342460:intergenic 55.0%
! GGGGTTCACTTAGGTGCCAT+TGG - tig0005653:12935-12954 Msa1342460:intron 55.0%
GGAGTCATCACGCTGACACT+AGG + tig0005653:13347-13366 Msa1342460:intergenic 55.0%
TGTGCGATTGTCTGTGTGCC+TGG - tig0005653:14548-14567 Msa1342460:intron 55.0%
TCGGTTAATAGTAGCCCGCG+TGG - tig0005653:14947-14966 Msa1342460:intron 55.0%
CGTTAGAGCGGGTATTCGAG+GGG - tig0005653:15553-15572 Msa1342460:intron 55.0%
GTTAGAGCGGGTATTCGAGG+GGG - tig0005653:15554-15573 Msa1342460:intron 55.0%
GATGACGAGGGCGGGAAGAA+GGG + tig0005653:6608-6627 Msa1342460:intergenic 60.0%
AGATGACGAGGGCGGGAAGA+AGG + tig0005653:6609-6628 Msa1342460:intergenic 60.0%
GGAGTGAAGATGACGAGGGC+GGG + tig0005653:6616-6635 Msa1342460:intergenic 60.0%
CGGAGTGAAGATGACGAGGG+CGG + tig0005653:6617-6636 Msa1342460:intergenic 60.0%
CGGCGGAGTGAAGATGACGA+GGG + tig0005653:6620-6639 Msa1342460:intergenic 60.0%
ACGGCGGAGTGAAGATGACG+AGG + tig0005653:6621-6640 Msa1342460:intergenic 60.0%
ATGGTCTGAAGGGAGTGGGG+CGG + tig0005653:6665-6684 Msa1342460:intergenic 60.0%
GCATGGCCTGTTGGGCTCTT+TGG - tig0005653:7501-7520 Msa1342460:intron 60.0%
GTTTGCTCCTTGTGGACCCC+AGG + tig0005653:11220-11239 Msa1342460:intergenic 60.0%
TCGAGTGCGGGGGCTGAACT+AGG + tig0005653:6500-6519 Msa1342460:intergenic 65.0%
AGTTCAGCCCCCGCACTCGA+CGG - tig0005653:6500-6519 Msa1342460:three_prime_UTR 65.0%
ATGACCTCCGTCGAGTGCGG+GGG + tig0005653:6510-6529 Msa1342460:intergenic 65.0%
CATGACCTCCGTCGAGTGCG+GGG + tig0005653:6511-6530 Msa1342460:intergenic 65.0%
CCATGACCTCCGTCGAGTGC+GGG + tig0005653:6512-6531 Msa1342460:intergenic 65.0%
GCCATGACCTCCGTCGAGTG+CGG + tig0005653:6513-6532 Msa1342460:intergenic 65.0%
GCACTCGACGGAGGTCATGG+CGG - tig0005653:6512-6531 Msa1342460:three_prime_UTR 65.0%
CACTCGACGGAGGTCATGGC+GGG - tig0005653:6513-6532 Msa1342460:three_prime_UTR 65.0%
GGGGCGGTGGCGTAGAGTAA+GGG + tig0005653:6649-6668 Msa1342460:intergenic 65.0%
TGGGGCGGTGGCGTAGAGTA+AGG + tig0005653:6650-6669 Msa1342460:intergenic 65.0%
GAATGGGCCTGGGGTCCACA+AGG - tig0005653:11210-11229 Msa1342460:intron 65.0%
AGCAGGCTATGGCAGAGCGG+TGG - tig0005653:12663-12682 Msa1342460:intron 65.0%
GAGCGTGGCTCACTGGTGGA+AGG + tig0005653:12706-12725 Msa1342460:intergenic 65.0%
CCCGCACTCGACGGAGGTCA+TGG - tig0005653:6509-6528 Msa1342460:three_prime_UTR 70.0%
GTCTGAAGGGAGTGGGGCGG+TGG + tig0005653:6662-6681 Msa1342460:intergenic 70.0%
TCAGCCCCCGCACTCGACGG+AGG - tig0005653:6503-6522 Msa1342460:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
tig0005653 gene 6389 16697 6389 ID=Msa1342460;Name=Msa1342460
tig0005653 mRNA 6389 16697 6389 ID=Msa1342460-mRNA-1;Parent=Msa1342460;Name=Msa1342460-mRNA-1;_AED=0.16;_eAED=0.16;_QI=139|0.84|0.92|1|0.76|1|14|486|431
tig0005653 exon 6389 6946 6389 ID=Msa1342460-mRNA-1:exon:3616;Parent=Msa1342460-mRNA-1
tig0005653 exon 7014 7115 7014 ID=Msa1342460-mRNA-1:exon:3615;Parent=Msa1342460-mRNA-1
tig0005653 exon 7275 7404 7275 ID=Msa1342460-mRNA-1:exon:3614;Parent=Msa1342460-mRNA-1
tig0005653 exon 8723 8808 8723 ID=Msa1342460-mRNA-1:exon:3613;Parent=Msa1342460-mRNA-1
tig0005653 exon 9058 9125 9058 ID=Msa1342460-mRNA-1:exon:3612;Parent=Msa1342460-mRNA-1
tig0005653 exon 11254 11275 11254 ID=Msa1342460-mRNA-1:exon:3611;Parent=Msa1342460-mRNA-1
tig0005653 exon 12124 12174 12124 ID=Msa1342460-mRNA-1:exon:3610;Parent=Msa1342460-mRNA-1
tig0005653 exon 12238 12351 12238 ID=Msa1342460-mRNA-1:exon:3609;Parent=Msa1342460-mRNA-1
tig0005653 exon 13771 13839 13771 ID=Msa1342460-mRNA-1:exon:3608;Parent=Msa1342460-mRNA-1
tig0005653 exon 13975 14033 13975 ID=Msa1342460-mRNA-1:exon:3607;Parent=Msa1342460-mRNA-1
tig0005653 exon 14430 14508 14430 ID=Msa1342460-mRNA-1:exon:3606;Parent=Msa1342460-mRNA-1
tig0005653 exon 15559 15626 15559 ID=Msa1342460-mRNA-1:exon:3605;Parent=Msa1342460-mRNA-1
tig0005653 exon 15736 15843 15736 ID=Msa1342460-mRNA-1:exon:3604;Parent=Msa1342460-mRNA-1
tig0005653 exon 16291 16697 16291 ID=Msa1342460-mRNA-1:exon:3603;Parent=Msa1342460-mRNA-1
tig0005653 five_prime_UTR 16559 16697 16559 ID=Msa1342460-mRNA-1:five_prime_utr;Parent=Msa1342460-mRNA-1
tig0005653 CDS 16291 16558 16291 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 15736 15843 15736 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 15559 15626 15559 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 14430 14508 14430 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 13975 14033 13975 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 13771 13839 13771 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 12238 12351 12238 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 12124 12174 12124 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 11254 11275 11254 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 9058 9125 9058 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 8723 8808 8723 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 7275 7404 7275 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 7014 7115 7014 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 CDS 6875 6946 6875 ID=Msa1342460-mRNA-1:cds;Parent=Msa1342460-mRNA-1
tig0005653 three_prime_UTR 6389 6874 6389 ID=Msa1342460-mRNA-1:three_prime_utr;Parent=Msa1342460-mRNA-1
Gene Sequence

>Msa1342460

ATGGCGGGAACCACCGCCCATTTACTCATCCTCACGCCGCATTCTTCCTCATTCCCTCGTCTAAACTCTCTATTTCTCCCTTCTTCCCGCCCTCGTCATCTTCACTCCGCCGTTAAATCCCTTACTCTACGCCACCGCCCCACTCCCTTCAGACCATGTGCTCAATCCCATCAGGGAGATGGTAGTGGTAGTGGAAGCAAAGAGTCAAAAGGATTGAGCTGGGTTGAACCCATTTTGAGCTTTGCTAGGGGCAATGTCTTACCCTTAGCTCTGATTTCTGCGGTGACGTTAGGATTAACATGTCCTAGTCTTGGTTGCGCTGTTGACAAATATCATGTATCCAAAATTGGGCCGTTTGGAATTTTTGTTATCTCAGGGTTGGTGTTGCGAAGCGAAGAAATTGGTGCAGCTGTAGAAGCATGGCCTGTTGGGCTCTTTGGGCTAGTATCTATTTTATTTCTTACACCATACTTTTCCAGGGTAATATTACAAATTCAGCTCCAACCCCAAGAATTTATTACAGGGTTAGCCATATTTTGCTGTATGCCAACTACATTATCAAGTGGTGTTGCACTTACCCAGCTTGCTGGAGCAAATACTGCACTGGCTCTTGCAATGACAGTAATATCTAACTTGTTAGGAATATTAATTATTCCATTTTCCATCACAAAATTTGTAGCTAGTGGAGTTGGAGTGACTTTACCCACCAAGCAGTTATTTAAAAGTCTTGTTCTTACCATATTAATCCCCCTTATTTTGGGAAAGAATATGTCCTCCTTCCATGAGCTTACTGCTAGGTTTCTTTATGTTTATGAGGTTCTACGTGAATCTTTTAAAGATGTTGCTGACTTTGTTGACAGAAACCGTAAGCTTTTCTCAGGGATCAGTGCATTTTTTCTTAGCCTGGTACCTTGGATACAAGTGAGCAAGTCAAGGTCACTTCTGTTAATAGTGAAGCCCAAAGTTTTTCTTGTAGCTATTGGACTGGGAGCACTTCTTCATCTGACCTTATTGGTATTCAATAGCATTGCTGTCCGGAGTCTTTCAATTATCTCTGGTGGTAGAAAATCAACTTTTTCCCGTGAAGAAAATGCCAACGCACTCATACTAGTTGCAAGCCAGAAAACATTACCAGTAATGGTAGCGGTTATAGAGCCACTTTGTGGTGCATTTGGAGAATCTGGGTTACTGGTTCTTCCTTGTATTGCAACACATCTAATCCAGATTATTGTGGACTCTTTTCTTGTCAACTTCATGCGTCGCAAAGACAATACCGGTAATGTCAAGGTGGCTTAA

Protein sequence

>Msa1342460

MAGTTAHLLILTPHSSSFPRLNSLFLPSSRPRHLHSAVKSLTLRHRPTPFRPCAQSHQGDGSGSGSKESKGLSWVEPILSFARGNVLPLALISAVTLGLTCPSLGCAVDKYHVSKIGPFGIFVISGLVLRSEEIGAAVEAWPVGLFGLVSILFLTPYFSRVILQIQLQPQEFITGLAIFCCMPTTLSSGVALTQLAGANTALALAMTVISNLLGILIIPFSITKFVASGVGVTLPTKQLFKSLVLTILIPLILGKNMSSFHELTARFLYVYEVLRESFKDVADFVDRNRKLFSGISAFFLSLVPWIQVSKSRSLLLIVKPKVFLVAIGLGALLHLTLLVFNSIAVRSLSIISGGRKSTFSREENANALILVASQKTLPVMVAVIEPLCGAFGESGLLVLPCIATHLIQIIVDSFLVNFMRRKDNTGNVKVA*