AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0727230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0727230 MtrunA17_Chr5g0419421 88.042 669 54 5 576 1226 4 664 0.0 1139
Msa0727230 MtrunA17_Chr5g0419421 83.283 664 31 10 1 587 1 661 0.0 1004
Msa0727230 MtrunA17_Chr6g0471681 83.931 641 86 4 587 1226 40 664 0.0 1076
Msa0727230 MtrunA17_Chr6g0471681 73.820 657 78 12 1 587 29 661 0.0 908
Msa0727230 MtrunA17_Chr3g0135101 71.537 657 129 5 615 1226 26 669 0.0 924
Msa0727230 MtrunA17_Chr3g0135101 73.980 392 51 9 235 587 287 666 9.39e-179 542
Msa0727230 MtrunA17_Chr3g0135101 62.842 183 35 3 3 169 4 169 7.19e-64 230
Msa0727230 MtrunA17_Chr5g0419411 92.991 428 30 0 799 1226 2 429 0.0 825
Msa0727230 MtrunA17_Chr5g0419411 79.384 422 33 5 220 587 5 426 0.0 656
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0727230 AT5G13210.1 60.215 651 230 4 605 1226 23 673 0.0 805
Msa0727230 AT5G13210.1 51.449 690 212 14 1 587 1 670 0.0 643
Msa0727230 AT5G43400.1 59.468 639 213 6 616 1226 35 655 0.0 772
Msa0727230 AT5G43400.1 49.565 690 207 15 1 587 1 652 0.0 601
Msa0727230 AT5G43390.1 57.055 652 232 8 601 1226 14 643 0.0 736
Msa0727230 AT5G43390.1 47.883 685 207 14 2 586 5 639 0.0 589
Msa0727230 AT3G24780.1 57.990 607 200 5 630 1191 107 703 0.0 722
Msa0727230 AT3G24780.1 50.412 607 183 10 57 555 107 703 0.0 553

Find 380 sgRNAs with CRISPR-Local

Find 882 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGGTGGTGAGTGGATTT+TGG 0.203979 5_1:+29469699 None:intergenic
ATCATGAAGAAACTTGAAAT+TGG 0.206773 5_1:+29469217 None:intergenic
ATCATGAAGAAACTTGAAAT+TGG 0.206773 5_1:+29477599 None:intergenic
TCATGAGATTATAGGGTCTT+TGG 0.221619 5_1:-29468751 Msa0727230:CDS
GTGTTAGTGGTGGTAGGGTT+AGG 0.222334 5_1:+29469944 None:intergenic
GTGGTGGTGGTGGTAGGGTT+AGG 0.235728 5_1:+29478365 None:intergenic
GCCTCAGCTTCATGTGATTC+AGG 0.257750 5_1:-29468514 Msa0727230:CDS
GCCTTCTTTGTTGGACTTGC+CGG 0.260625 5_1:+29478058 None:intergenic
TGAGGGCAGTGAGAGGGTTT+TGG 0.266451 5_1:+29478114 None:intergenic
GAATCTGCTGACATTGTTCT+TGG 0.268467 5_1:-29468151 Msa0727230:CDS
TTGCTTCCTCATGAGATTAT+AGG 0.271882 5_1:-29468759 Msa0727230:CDS
GAATCTGCTGACATTGTTCT+TGG 0.284328 5_1:-29476536 Msa0727230:CDS
AAATCAGTCTTGCTGCTAAA+TGG 0.287484 5_1:-29469124 Msa0727230:CDS
TCAACCCCATCGGTGGGTTT+TGG 0.292272 5_1:+29469840 None:intergenic
GCTTCTATGCTGCCGCTCTA+TGG 0.294484 5_1:-29478037 Msa0727230:CDS
TGAAGATGAAGATTTCCTTT+TGG 0.296212 5_1:+29477857 None:intergenic
CTTCTCCTTATAAAACTTCA+TGG 0.297463 5_1:+29477245 None:intergenic
CTTGCTGTGTGTGATGTGTC+TGG 0.301225 5_1:-29477027 Msa0727230:CDS
GATGTGTCTGGGAGCATGTC+TGG 0.302383 5_1:-29468630 Msa0727230:CDS
GTCTGTGGCATTGGGGTTGT+TGG 0.311302 5_1:-29468592 Msa0727230:CDS
ATATGCGATCAAACACCTTC+TGG 0.312936 5_1:+29468427 None:intergenic
ATATGCGATCAAACACCTTC+TGG 0.312936 5_1:+29476812 None:intergenic
GCTTCTACGCTGCCGCTCTA+TGG 0.315868 5_1:-29469622 Msa0727230:CDS
GAATTGCCTGAGGTGTTTAT+TGG 0.320710 5_1:-29468933 Msa0727230:CDS
ATGGAGGTGTCTGTGGCATT+GGG 0.321729 5_1:-29468600 Msa0727230:CDS
TATGGAGGTGTCTGTGGCAT+TGG 0.327031 5_1:-29468601 Msa0727230:CDS
CTTGCAGTGTGTGATGTGTC+TGG 0.344032 5_1:-29468642 Msa0727230:CDS
GGGATTTGATTCCTTACAAT+AGG 0.344162 5_1:-29468899 Msa0727230:CDS
GAGTTGCCTGAGGTGTTTAT+TGG 0.349776 5_1:-29477315 Msa0727230:CDS
GCCTTCTTTATCGGACTTAC+CGG 0.351249 5_1:+29469643 None:intergenic
TGCTTCCTCATGAGATTATA+GGG 0.353445 5_1:-29468758 Msa0727230:CDS
GGGGTTTGATTCCTTACAAT+AGG 0.355708 5_1:-29477281 Msa0727230:CDS
CTGTGCCTCAGATAGTCTTT+TGG 0.356529 5_1:-29468248 Msa0727230:CDS
CCATGGTTCCTCACTCAATT+CGG 0.357198 5_1:+29468566 None:intergenic
CATGAGATTATAGGGTCTTT+GGG 0.360120 5_1:-29468750 Msa0727230:CDS
AGAAGACGGTAGAGGATCTC+AGG 0.360575 5_1:+29469524 None:intergenic
TGTTAGTGGTGGTAGGGTTA+GGG 0.364081 5_1:+29469945 None:intergenic
ATCAAGCGTCTGCAAACTCT+TGG 0.365158 5_1:-29468326 Msa0727230:CDS
ATCAAGCGTCTGCAAACTCT+TGG 0.365158 5_1:-29476711 Msa0727230:CDS
TCAACCCCATCGGTGGGTTT+CGG 0.365837 5_1:+29478255 None:intergenic
GACACAGTTCGTGAGGGATA+TGG 0.369160 5_1:-29468472 Msa0727230:CDS
AGGAGGCGCATTATGCTTAT+AGG 0.369882 5_1:-29469007 Msa0727230:CDS
AGGAGGCGCATTATGCTTAT+AGG 0.369882 5_1:-29477389 Msa0727230:CDS
TGTTTATTGGTTCTAATCAA+TGG 0.370352 5_1:-29468920 Msa0727230:CDS
AGCGTAGAAGCCTTCTTTAT+CGG 0.373596 5_1:+29469634 None:intergenic
TGTTTATTGGTGCTAATCAA+TGG 0.374653 5_1:-29477302 Msa0727230:CDS
ATCGGTGGGTTTCGGTTCCT+TGG 0.379910 5_1:+29478263 None:intergenic
TGGTGGTGGTGGTAGGGTTA+GGG 0.384301 5_1:+29478366 None:intergenic
GTTGATGATTTGCTTAAGAA+AGG 0.386144 5_1:-29468681 Msa0727230:CDS
GCAGCTTCCATGGCTTCTAC+AGG 0.387857 5_1:+29468108 None:intergenic
GCAGCTTCCATGGCTTCTAC+AGG 0.387857 5_1:+29476493 None:intergenic
CCTAGTGATTGCTTGGTAAT+CGG 0.388642 5_1:+29468299 None:intergenic
CCTAGTGATTGCTTGGTAAT+CGG 0.388642 5_1:+29476684 None:intergenic
GGAGAGGTTTGAGAAGTACT+TGG 0.389397 5_1:-29468823 Msa0727230:CDS
GGAGAGGTTTGAGAAGTACT+TGG 0.389397 5_1:-29477205 Msa0727230:CDS
AGAAGACGATAGAGGATCTC+AGG 0.394537 5_1:+29477939 None:intergenic
GCCATGGAAGCTGCCATCGC+TGG 0.399741 5_1:-29468099 Msa0727230:CDS
GCCATGGAAGCTGCCATCGC+TGG 0.399741 5_1:-29476484 Msa0727230:CDS
GTGTGTAGCATTGGGGTTGT+TGG 0.401844 5_1:-29476977 Msa0727230:CDS
GTTTGTGAGGAACATGGATT+GGG 0.401906 5_1:-29476851 Msa0727230:CDS
ATCGACTAAGACATCGTTAG+TGG 0.402645 5_1:+29469898 None:intergenic
GAGTGGAAGGAAAGGAAATC+TGG 0.403522 5_1:-29469467 Msa0727230:CDS
GGATTTGATTCCTTACAATA+GGG 0.403530 5_1:-29468898 Msa0727230:CDS
AGCATAGAAGCCTTCTTTGT+TGG 0.404217 5_1:+29478049 None:intergenic
GGGTTTGATTCCTTACAATA+GGG 0.405295 5_1:-29477280 Msa0727230:CDS
GAAGGTGTTTGATCGCATAT+TGG 0.405938 5_1:-29468424 Msa0727230:CDS
GAAGGTGTTTGATCGCATAT+TGG 0.405938 5_1:-29476809 Msa0727230:CDS
CGATGTCTTCGTCGATCAAA+TGG 0.407547 5_1:-29478306 Msa0727230:CDS
GGAGGCGCATTATGCTTATA+GGG 0.411872 5_1:-29469006 Msa0727230:CDS
GGAGGCGCATTATGCTTATA+GGG 0.411872 5_1:-29477388 Msa0727230:CDS
GTTTATTGGTGCTAATCAAT+GGG 0.412509 5_1:-29477301 Msa0727230:CDS
GGAAGCTGCTCATGCTTTGA+AGG 0.418248 5_1:-29477676 Msa0727230:CDS
CTTTCTGAGTGGATGGCACC+GGG 0.421088 5_1:+29468202 None:intergenic
CTTTCTGAGTGGATGGCACC+GGG 0.421088 5_1:+29476587 None:intergenic
GTTTATTGGTTCTAATCAAT+GGG 0.421188 5_1:-29468919 Msa0727230:CDS
GGTTTGAGCGGTGGTGTTAG+TGG 0.421910 5_1:+29469931 None:intergenic
GAGTGGAGGGAAAGGAAATC+TGG 0.423211 5_1:-29477882 Msa0727230:CDS
AAATCAAAATCAAAATCAAA+AGG 0.423267 5_1:+29469416 None:intergenic
GTTCGTGAGGGATATGGATT+GGG 0.423720 5_1:-29468466 Msa0727230:CDS
GGTGGTTTGAGCGGTGGTGG+TGG 0.427362 5_1:+29478352 None:intergenic
CTCCGTGGTGTTCGTGGTAC+CGG 0.428319 5_1:-29478077 Msa0727230:CDS
CACAACTAGTTTCTGATACT+CGG 0.428515 5_1:+29468074 None:intergenic
CACAACTAGTTTCTGATACT+CGG 0.428515 5_1:+29476459 None:intergenic
TATACTTCCTAGTGATTGCT+TGG 0.431774 5_1:+29476677 None:intergenic
AGTTTGTGAGGAACATGGAT+TGG 0.432352 5_1:-29476852 Msa0727230:CDS
ATGGAGGTGTGTGTAGCATT+GGG 0.432777 5_1:-29476985 Msa0727230:CDS
TTACAATAGGGTTGCTTCTG+TGG 0.434673 5_1:-29477268 Msa0727230:CDS
CCGTTGACTCTTCCTTTGAT+CGG 0.435307 5_1:-29469094 Msa0727230:CDS
TCATGAAGAAACTTGAAATT+GGG 0.436482 5_1:+29469218 None:intergenic
TCATGAAGAAACTTGAAATT+GGG 0.436482 5_1:+29477600 None:intergenic
ACTAGGAAGTATAGAAAGAA+AGG 0.441720 5_1:-29476667 Msa0727230:intron
GGTTTGAGCGGTGGTGGTGG+TGG 0.442517 5_1:+29478355 None:intergenic
GCCAGCGATGGCAGCTTCCA+TGG 0.443302 5_1:+29468098 None:intergenic
GCCAGCGATGGCAGCTTCCA+TGG 0.443302 5_1:+29476483 None:intergenic
GGTGGCCAACTTCAATTCTC+TGG 0.445519 5_1:-29469870 Msa0727230:CDS
GTTCCTCACAAACTTTGTCT+TGG 0.445968 5_1:+29476861 None:intergenic
CTTCGTGGTGTTCGTGGTAC+CGG 0.445975 5_1:-29469662 Msa0727230:CDS
GTTCCTTCCCTCGCTGACTT+TGG 0.447504 5_1:-29469563 Msa0727230:CDS
GTTCCTTCCCTCGCTGACTT+TGG 0.447504 5_1:-29477978 Msa0727230:CDS
GGGAAGGAACATTGGTAGCT+AGG 0.450762 5_1:+29469576 None:intergenic
GGGAAGGAACATTGGAAGCT+AGG 0.450762 5_1:+29477991 None:intergenic
ACTAGGAAGTATAGCGAGAA+AGG 0.454566 5_1:-29468282 Msa0727230:CDS
GAGCATGTCTGGGACTCCTA+TGG 0.455047 5_1:-29468619 Msa0727230:CDS
ACAACTAGTTTCTGATACTC+GGG 0.457651 5_1:+29468075 None:intergenic
ACAACTAGTTTCTGATACTC+GGG 0.457651 5_1:+29476460 None:intergenic
AGTGGTGGTTTGAGCGGTGG+TGG 0.459812 5_1:+29478349 None:intergenic
TGTAACCTCCGTGGTGTTCG+TGG 0.460467 5_1:-29478083 Msa0727230:CDS
ATCGACGAAGACATCGTTAG+TGG 0.461424 5_1:+29478313 None:intergenic
CGATGTCTTAGTCGATCAAA+TGG 0.462259 5_1:-29469891 Msa0727230:CDS
GCGGTGGTGTTAGTGGTGGT+AGG 0.463470 5_1:+29469938 None:intergenic
TGTAACCTTCGTGGTGTTCG+TGG 0.465043 5_1:-29469668 Msa0727230:CDS
AGAGGTGGCAGCGAGAGTTA+AGG 0.468057 5_1:-29477706 Msa0727230:intron
CGTTGATGATTTGCTCAAGA+AGG 0.468757 5_1:-29477067 Msa0727230:CDS
AATCAAAATCAAAATCAAAA+GGG 0.469877 5_1:+29469417 None:intergenic
CCTTTCTGAGTGGATGGCAC+CGG 0.470831 5_1:+29468201 None:intergenic
CCTTTCTGAGTGGATGGCAC+CGG 0.470831 5_1:+29476586 None:intergenic
GGTGGTGGTGGTTTGAGTGG+TGG 0.471003 5_1:+29478334 None:intergenic
TATGGAGGTGTGTGTAGCAT+TGG 0.471438 5_1:-29476986 Msa0727230:CDS
ATAGGGTTCGTGATCGTTTG+AGG 0.471872 5_1:-29468989 Msa0727230:CDS
ATAGGGTTCGTGATCGTTTG+AGG 0.471872 5_1:-29477371 Msa0727230:CDS
GATTTGAGAGTATAGATCTC+AGG 0.472695 5_1:+29478392 None:intergenic
TCACCAACGTTTCTCTCTAC+TGG 0.473200 5_1:-29469806 Msa0727230:CDS
GAAATCGAGACAAGGGTTAC+CGG 0.477245 5_1:+29478202 None:intergenic
TATACTTCCTAGTGATTGCT+TGG 0.477986 5_1:+29468292 None:intergenic
TGCCAAGAGGATCTTCCCTT+GGG 0.479061 5_1:-29469048 Msa0727230:CDS
TTGCCAAGAGGATCTTCCCT+TGG 0.480374 5_1:-29469049 Msa0727230:CDS
GCCACTCCTTTCTGAGTGGA+TGG 0.483109 5_1:+29476580 None:intergenic
TTGCTGTGTGTGATGTGTCT+GGG 0.483780 5_1:-29477026 Msa0727230:CDS
AAAGGAGTGGCGCTGGTAAG+TGG 0.484002 5_1:-29468183 Msa0727230:CDS
GCCTCAGCTTCATGTGATTG+AGG 0.484160 5_1:-29476899 Msa0727230:CDS
AGGAGGATCAGATGATTAAG+AGG 0.485373 5_1:-29468377 Msa0727230:CDS
AGGAGGATCAGATGATTAAG+AGG 0.485373 5_1:-29476762 Msa0727230:CDS
AGAAAGAAGAGTGGAGGGAA+AGG 0.487853 5_1:-29477890 Msa0727230:CDS
AAGTATAGAAAGAAAGGGTA+TGG 0.487906 5_1:-29476661 Msa0727230:intron
TACTTGGAGGATGTGAAGGC+AGG 0.488941 5_1:-29468807 Msa0727230:CDS
TACTTGGAGGATGTGAAGGC+AGG 0.488941 5_1:-29477189 Msa0727230:CDS
AGTGTCTCAGAAGGAGTATC+AGG 0.489014 5_1:+29469749 None:intergenic
ATCCCTCACGAACTGTGTCT+TGG 0.489557 5_1:+29468476 None:intergenic
GTAATAACCTTCCCTTTCCA+TGG 0.491644 5_1:+29468549 None:intergenic
GTAATAACCTTCCCTTTCCA+TGG 0.491644 5_1:+29476934 None:intergenic
TTCTCTGTCAACCCCATCGG+TGG 0.494614 5_1:+29469833 None:intergenic
ATGTGTCTGGGAGCATGTCT+GGG 0.495012 5_1:-29468629 Msa0727230:CDS
GTATCAGAAACTAGTTGTGC+TGG 0.495109 5_1:-29468070 Msa0727230:CDS
AATGCTACACACACCTCCAT+AGG 0.501130 5_1:+29476988 None:intergenic
ATCGTTAGTGGTTGTTGTGG+AGG 0.501932 5_1:+29469910 None:intergenic
CCTCAGCTTCATGTGATTCA+GGG 0.504209 5_1:-29468513 Msa0727230:CDS
AGAAAGAAGAGTGGAAGGAA+AGG 0.506196 5_1:-29469475 Msa0727230:CDS
GAGTATGCATGGGACCCCTA+TGG 0.506823 5_1:-29477004 Msa0727230:CDS
AGTTCGTGAGGGATATGGAT+TGG 0.508853 5_1:-29468467 Msa0727230:CDS
GGATGGAGATGGTGGAGAAG+TGG 0.510289 5_1:-29468727 Msa0727230:CDS
ACAGAAGCAACCCTATTGTA+AGG 0.510787 5_1:+29477270 None:intergenic
GGAATATGAAGGTGTGGAGG+AGG 0.511393 5_1:-29469024 Msa0727230:CDS
GGAATATGAAGGTGTGGAGG+AGG 0.511393 5_1:-29477406 Msa0727230:intron
CCTCAGCTTCATGTGATTGA+GGG 0.511737 5_1:-29476898 Msa0727230:CDS
ACAGAAGCCACCCTATTGTA+AGG 0.513119 5_1:+29468888 None:intergenic
CTGATACTCGGGGCCAGCGA+TGG 0.513732 5_1:+29468086 None:intergenic
CTGATACTCGGGGCCAGCGA+TGG 0.513732 5_1:+29476471 None:intergenic
CACTCAGAAAGGAGTGGCAC+TGG 0.513905 5_1:-29476575 Msa0727230:CDS
TCAAGCGTCTGCAAACTCTT+GGG 0.514244 5_1:-29468325 Msa0727230:CDS
TCAAGCGTCTGCAAACTCTT+GGG 0.514244 5_1:-29476710 Msa0727230:CDS
GGAGGTTACAGACGAGTTTG+AGG 0.518435 5_1:+29478096 None:intergenic
ATTATAGAGTCTTTGCGTGA+TGG 0.519156 5_1:-29477126 Msa0727230:intron
CTCCCAAGGGAAGATCCTCT+TGG 0.520806 5_1:+29469046 None:intergenic
CTTTGGAACCTTCGAGAAGA+CGG 0.520896 5_1:+29469510 None:intergenic
CGAGTTTGAGGGCAGTGAGA+GGG 0.521212 5_1:+29478108 None:intergenic
CAGCTTCCATGGCTTCTACA+GGG 0.521562 5_1:+29468109 None:intergenic
CAGCTTCCATGGCTTCTACA+GGG 0.521562 5_1:+29476494 None:intergenic
GAGGTTTGAGAAGTACTTGG+AGG 0.521875 5_1:-29468820 Msa0727230:CDS
GAGGTTTGAGAAGTACTTGG+AGG 0.521875 5_1:-29477202 Msa0727230:CDS
GGAAGGAACATTGGTAGCTA+GGG 0.522147 5_1:+29469577 None:intergenic
GGAAGGAACATTGGAAGCTA+GGG 0.522147 5_1:+29477992 None:intergenic
GAGGTTACAGACGAGTTTGA+GGG 0.522219 5_1:+29478097 None:intergenic
CACTCAGAAAGGAGTGGCGC+TGG 0.524221 5_1:-29468190 Msa0727230:CDS
GACATCGTTAGTGGTGGTGG+TGG 0.528691 5_1:+29478322 None:intergenic
ATATTGGATGTGGCTGTCAA+TGG 0.529469 5_1:-29468408 Msa0727230:CDS
ATATTGGATGTGGCTGTCAA+TGG 0.529469 5_1:-29476793 Msa0727230:CDS
AAGTATAGCGAGAAAGGGTA+TGG 0.530567 5_1:-29468276 Msa0727230:CDS
GCCACTCCTTTCTGAGTGGA+TGG 0.533051 5_1:+29468195 None:intergenic
ATGCTACACACACCTCCATA+GGG 0.534414 5_1:+29476989 None:intergenic
TTGCAGTGTGTGATGTGTCT+GGG 0.534674 5_1:-29468641 Msa0727230:CDS
TTGAGTGGTGGTTTGAGCGG+TGG 0.535032 5_1:+29478346 None:intergenic
GTTGATGATTTGCTCAAGAA+GGG 0.536020 5_1:-29477066 Msa0727230:CDS
GAAGACATCGTTAGTGGTGG+TGG 0.536919 5_1:+29478319 None:intergenic
AAAGGAAATCTGGATCCAAA+AGG 0.541013 5_1:-29477872 Msa0727230:CDS
GATGTGTCTGGGAGTATGCA+TGG 0.541073 5_1:-29477015 Msa0727230:CDS
GACATCGTTAGTGGTTGTTG+TGG 0.541165 5_1:+29469907 None:intergenic
ACCGGCAAGTCCAACAAAGA+AGG 0.544742 5_1:-29478059 Msa0727230:CDS
AGCAACCAAAACCCACCGAT+GGG 0.545255 5_1:-29469845 Msa0727230:CDS
AGTGGTGGTGGTGGTTTGAG+TGG 0.546071 5_1:+29478331 None:intergenic
AGAGGTGGCAGCGAGAGATA+AGG 0.547672 5_1:-29469324 Msa0727230:CDS
GTCAGCGAGGGAAGGAACAT+TGG 0.548818 5_1:+29477983 None:intergenic
AAAGGAGTGGCACTGGTAAG+TGG 0.549583 5_1:-29476568 Msa0727230:CDS
GACTCCTATGGAGGTGTCTG+TGG 0.550102 5_1:-29468607 Msa0727230:CDS
GACAAAGTTTGTGAGGAACA+TGG 0.551414 5_1:-29476857 Msa0727230:CDS
CCTTGGAAGAGAATTGAAGT+TGG 0.551483 5_1:+29478280 None:intergenic
TCGAGAGACTCAAACTAGCT+TGG 0.552185 5_1:-29469724 Msa0727230:CDS
AGCGAGAGTTAAGGCTCAGA+AGG 0.552664 5_1:-29477697 Msa0727230:CDS
AACCTTCGAGAAGACGATAG+AGG 0.553075 5_1:+29477931 None:intergenic
AAACTCGTCTGTAACCTTCG+TGG 0.553124 5_1:-29469677 Msa0727230:CDS
TCGAGAGGCTCAAACTAGCT+TGG 0.553365 5_1:-29478139 Msa0727230:intron
CAAGGATAACAAAGGGTGGA+AGG 0.554421 5_1:-29477757 Msa0727230:CDS
TGAACGAGGAACCATGGAAA+GGG 0.554458 5_1:-29476945 Msa0727230:CDS
TGAGTGAGGAACCATGGAAA+GGG 0.555980 5_1:-29468560 Msa0727230:CDS
CCAACTTCAATTCTCTTCCA+AGG 0.557082 5_1:-29478280 Msa0727230:CDS
TATTGGATGTGGCTGTCAAT+GGG 0.560043 5_1:-29468407 Msa0727230:CDS
TATTGGATGTGGCTGTCAAT+GGG 0.560043 5_1:-29476792 Msa0727230:CDS
ATGCTTTGAAGGAAGAGAAG+AGG 0.561707 5_1:-29477665 Msa0727230:CDS
TGTTGTTGTAGTTCTTGTTG+TGG 0.562180 5_1:+29477787 None:intergenic
GCTTGCCAGAGAATTGAAGT+TGG 0.563939 5_1:+29469865 None:intergenic
CCGATTACCAAGCAATCACT+AGG 0.565104 5_1:-29468299 Msa0727230:CDS
CCGATTACCAAGCAATCACT+AGG 0.565104 5_1:-29476684 Msa0727230:CDS
CTAGGAAGTATAGCGAGAAA+GGG 0.566439 5_1:-29468281 Msa0727230:CDS
GGAAGAGAAGAGGATTGCCT+TGG 0.568272 5_1:-29477655 Msa0727230:CDS
ATGAGATTATAGGGTCTTTG+GGG 0.568462 5_1:-29468749 Msa0727230:CDS
CCCTCAATCACATGAAGCTG+AGG 0.568852 5_1:+29476898 None:intergenic
GTCAGCGAGGGAAGGAACAT+TGG 0.569181 5_1:+29469568 None:intergenic
GAAGACGGTAGAGGATCTCA+GGG 0.570432 5_1:+29469525 None:intergenic
ATCCTCTACCGTCTTCTCGA+AGG 0.571604 5_1:-29469518 Msa0727230:CDS
CCGGTGCCATCCACTCAGAA+AGG 0.571959 5_1:-29468201 Msa0727230:CDS
CCGGTGCCATCCACTCAGAA+AGG 0.571959 5_1:-29476586 Msa0727230:CDS
CCCTGAATCACATGAAGCTG+AGG 0.572263 5_1:+29468513 None:intergenic
ACACCTTCATATTCCTCCCA+AGG 0.573102 5_1:+29469032 None:intergenic
ATGGCCTCCGTCACTCTCGT+TGG 0.573884 5_1:-29478419 Msa0727230:CDS
AAGCAACCAAAACCCACCGA+TGG 0.574356 5_1:-29469846 Msa0727230:CDS
TGTTGTAGTTCTTGTTGTGG+TGG 0.574406 5_1:+29477790 None:intergenic
GTTTGATCGCATATTGGATG+TGG 0.574432 5_1:-29468418 Msa0727230:CDS
GTTTGATCGCATATTGGATG+TGG 0.574432 5_1:-29476803 Msa0727230:CDS
TCACCAACGTTTCTCTCCAC+CGG 0.574691 5_1:-29478221 Msa0727230:CDS
AACCTTCGAGAAGACGGTAG+AGG 0.575489 5_1:+29469516 None:intergenic
GGTTTGAGTGGTGGTTTGAG+CGG 0.575667 5_1:+29478343 None:intergenic
ATGTTCTCTGTCAACCCCAT+CGG 0.575793 5_1:+29469830 None:intergenic
CTAGGAAGTATAGAAAGAAA+GGG 0.575902 5_1:-29476666 Msa0727230:intron
AAGGAGTGGCGCTGGTAAGT+GGG 0.577776 5_1:-29468182 Msa0727230:CDS
AGGAACCGAAACCCACCGAT+GGG 0.578305 5_1:-29478260 Msa0727230:CDS
GGGAAGACTACTATTGCTGC+TGG 0.579975 5_1:-29468786 Msa0727230:CDS
GGGAAGACTACTATTGCTGC+TGG 0.579975 5_1:-29477168 Msa0727230:intron
CAGTGCCACTCCTTTCTGAG+TGG 0.580391 5_1:+29476576 None:intergenic
CGGTGGTGTTAGTGGTGGTA+GGG 0.581199 5_1:+29469939 None:intergenic
TGGAGGTGTCTGTGGCATTG+GGG 0.582479 5_1:-29468599 Msa0727230:CDS
GAGAGACTCGAAGGCCACCC+CGG 0.584902 5_1:-29468220 Msa0727230:CDS
GAGAGACTCGAAGGCCACCC+CGG 0.584902 5_1:-29476605 Msa0727230:CDS
GAAGACGATAGAGGATCTCA+GGG 0.585178 5_1:+29477940 None:intergenic
TTGGAATCTGAGAGACTCGA+AGG 0.585593 5_1:-29476614 Msa0727230:CDS
AATGCCACAGACACCTCCAT+AGG 0.586105 5_1:+29468603 None:intergenic
AGGGAAGATCCTCTTGGCAA+TGG 0.586959 5_1:+29469052 None:intergenic
ACGAGTTTGAGGGCAGTGAG+AGG 0.587610 5_1:+29478107 None:intergenic
GATCTTTGTCTTTAGTGACA+TGG 0.587705 5_1:-29476740 Msa0727230:CDS
TTTCAGTCAACCCCATCGGT+GGG 0.587798 5_1:+29478249 None:intergenic
TTGAACGAGGAACCATGGAA+AGG 0.588133 5_1:-29476946 Msa0727230:CDS
TTCCCTTGGGAGGAATATGA+AGG 0.588989 5_1:-29469035 Msa0727230:CDS
ATCAACAAGCTTCTTAGCCA+AGG 0.589866 5_1:+29477638 None:intergenic
ACCGGTAAGTCCGATAAAGA+AGG 0.590139 5_1:-29469644 Msa0727230:CDS
CATGTCTGGGACTCCTATGG+AGG 0.590641 5_1:-29468616 Msa0727230:CDS
AAACGCAGAAAGAAGAGTGG+AGG 0.590903 5_1:-29477896 Msa0727230:CDS
GATCTTCGTGTTCAGTGACA+TGG 0.591209 5_1:-29468355 Msa0727230:CDS
ATCAAAATCAAAATCAAAAG+GGG 0.592135 5_1:+29469418 None:intergenic
TAACCAAAGTCAGCGAGGGA+AGG 0.592742 5_1:+29469560 None:intergenic
TAACCAAAGTCAGCGAGGGA+AGG 0.592742 5_1:+29477975 None:intergenic
AAGGAACCGAAACCCACCGA+TGG 0.593324 5_1:-29478261 Msa0727230:CDS
TTGAGTGAGGAACCATGGAA+AGG 0.593836 5_1:-29468561 Msa0727230:CDS
TATAAGCCCTGTAGAAGCCA+TGG 0.596604 5_1:-29468115 Msa0727230:CDS
TATAAGCCCTGTAGAAGCCA+TGG 0.596604 5_1:-29476500 Msa0727230:CDS
CTCAGCTTCATGTGATTCAG+GGG 0.597407 5_1:-29468512 Msa0727230:CDS
TCAAAGGAAGAGTCAACGGA+AGG 0.598171 5_1:+29469098 None:intergenic
TTTGATTCCTTACAATAGGG+TGG 0.598708 5_1:-29468895 Msa0727230:CDS
CTCAGCTTCATGTGATTGAG+GGG 0.599232 5_1:-29476897 Msa0727230:CDS
ACATTGTTCTTGGATAATGA+AGG 0.599605 5_1:-29468141 Msa0727230:CDS
ACATTGTTCTTGGATAATGA+AGG 0.599605 5_1:-29476526 Msa0727230:CDS
AGGACGTCAAGGATAACAAA+GGG 0.599606 5_1:-29477764 Msa0727230:CDS
TTTATTGGTGCTAATCAATG+GGG 0.599749 5_1:-29477300 Msa0727230:CDS
TTTGTGAGGAACATGGATTG+GGG 0.600633 5_1:-29476850 Msa0727230:CDS
TTGGAATCTGAGAGACTCGA+AGG 0.600799 5_1:-29468229 Msa0727230:CDS
TTAGAACCAATAAACACCTC+AGG 0.602489 5_1:+29468927 None:intergenic
CTGAATTGAACGAGGAACCA+TGG 0.603342 5_1:-29476951 Msa0727230:CDS
GAAGTACTTGGAGGATGTGA+AGG 0.604063 5_1:-29468811 Msa0727230:CDS
GAAGTACTTGGAGGATGTGA+AGG 0.604063 5_1:-29477193 Msa0727230:CDS
ACTTGGAGGATGTGAAGGCA+GGG 0.604217 5_1:-29468806 Msa0727230:CDS
ACTTGGAGGATGTGAAGGCA+GGG 0.604217 5_1:-29477188 Msa0727230:CDS
AGGTGGGCCAACGAGAGTGA+CGG 0.604540 5_1:+29478412 None:intergenic
TGTGTTGGTGCCGTTGAGGA+AGG 0.604572 5_1:-29468961 Msa0727230:CDS
TGTGTTGGTGCCGTTGAGGA+AGG 0.604572 5_1:-29477343 Msa0727230:CDS
CTCTCGACGAGTGTCTCAGA+AGG 0.605004 5_1:+29469740 None:intergenic
TCTCTGTCAACCCCATCGGT+GGG 0.605392 5_1:+29469834 None:intergenic
CAAGAGGATCTTCCCTTGGG+AGG 0.606223 5_1:-29469045 Msa0727230:CDS
CCGAATTGAGTGAGGAACCA+TGG 0.607067 5_1:-29468566 Msa0727230:CDS
GAGAAGTGGCTGAGTTGCAG+TGG 0.607162 5_1:-29468713 Msa0727230:CDS
GTGAAGTGGCTGAGTTGCAG+TGG 0.607162 5_1:-29477098 Msa0727230:CDS
CCGATCAAAGGAAGAGTCAA+CGG 0.608539 5_1:+29469094 None:intergenic
TTGAGAGTATAGATCTCAGG+TGG 0.608833 5_1:+29478395 None:intergenic
TGGAAGAAGAAATCAAGACA+TGG 0.609649 5_1:+29469779 None:intergenic
GGTGCCGTTGAGGAAGGTGT+TGG 0.609929 5_1:-29477337 Msa0727230:CDS
GGTTGTTGTGGAGGTTTGAG+CGG 0.610193 5_1:+29469919 None:intergenic
GAGTCTTTGCGTGATGGAGA+TGG 0.610505 5_1:-29477120 Msa0727230:CDS
CAGCGCCACTCCTTTCTGAG+TGG 0.610539 5_1:+29468191 None:intergenic
CACCTTCATATTCCTCCCAA+GGG 0.611175 5_1:+29469033 None:intergenic
AATGCAGAAAGAAGAGTGGA+AGG 0.611503 5_1:-29469480 Msa0727230:CDS
TGTTGTGGAGGTTTGAGCGG+TGG 0.615236 5_1:+29469922 None:intergenic
AGATTCCAAAAGACTATCTG+AGG 0.615433 5_1:+29468243 None:intergenic
ATGTGTCTGGGAGTATGCAT+GGG 0.615466 5_1:-29477014 Msa0727230:CDS
CTGAGTGGATGGCACCGGGG+TGG 0.616153 5_1:+29468206 None:intergenic
CTGAGTGGATGGCACCGGGG+TGG 0.616153 5_1:+29476591 None:intergenic
CTACAACAACAAGGACGTCA+AGG 0.616279 5_1:-29477775 Msa0727230:CDS
TAACAGCGTTGACCGATCAA+AGG 0.617986 5_1:+29469082 None:intergenic
TGCTCAAGAAGGGAAAGATG+AGG 0.619614 5_1:-29477056 Msa0727230:CDS
GGCTGTCAATGGGAATCTCA+AGG 0.621591 5_1:-29468397 Msa0727230:CDS
GGCTGTCAATGGGAATCTCA+AGG 0.621591 5_1:-29476782 Msa0727230:CDS
GGTGCCGTTGAGGAAGGTGT+TGG 0.622773 5_1:-29468955 Msa0727230:CDS
TTGAGCGGTGGTGTTAGTGG+TGG 0.625189 5_1:+29469934 None:intergenic
AACGCAGAAAGAAGAGTGGA+GGG 0.626310 5_1:-29477895 Msa0727230:CDS
TTAGCACCAATAAACACCTC+AGG 0.626398 5_1:+29477309 None:intergenic
AGACTTCATCAAGACTGAAG+AGG 0.626501 5_1:-29469342 Msa0727230:CDS
AATTCCAACACCTTCCTCAA+CGG 0.628014 5_1:+29468951 None:intergenic
AAGGATAACAAAGGGTGGAA+GGG 0.628322 5_1:-29477756 Msa0727230:CDS
AACTCCAACACCTTCCTCAA+CGG 0.630137 5_1:+29477333 None:intergenic
CTTCATCAAGACTGAAGAGG+TGG 0.631113 5_1:-29469339 Msa0727230:CDS
TTGGGAGGAATATGAAGGTG+TGG 0.633554 5_1:-29469030 Msa0727230:CDS
GCAAAATGCAGAAAGAAGAG+TGG 0.635170 5_1:-29469484 Msa0727230:CDS
GTCCAAGACACAGTTCGTGA+GGG 0.639286 5_1:-29468478 Msa0727230:CDS
TTGTGAGGAACATGGATTGG+GGG 0.639683 5_1:-29476849 Msa0727230:CDS
AAAGACCCTATAATCTCATG+AGG 0.640006 5_1:+29468753 None:intergenic
TTCGTGAGGGATATGGATTG+GGG 0.640869 5_1:-29468465 Msa0727230:CDS
GAAGTAACCAAAGTCAGCGA+GGG 0.641029 5_1:+29469556 None:intergenic
GAAGTAACCAAAGTCAGCGA+GGG 0.641029 5_1:+29477971 None:intergenic
CAACAAGAACTACAACAACA+AGG 0.642561 5_1:-29477784 Msa0727230:CDS
AGTCCAAGACAAAGTTTGTG+AGG 0.642724 5_1:-29476864 Msa0727230:CDS
AGTCCAAGACACAGTTCGTG+AGG 0.643681 5_1:-29468479 Msa0727230:CDS
GGAGGAATATGAAGGTGTGG+AGG 0.643817 5_1:-29469027 Msa0727230:CDS
TGGGCCAACGAGAGTGACGG+AGG 0.645125 5_1:+29478415 None:intergenic
GGAAGAAGAAATCGAGACAA+GGG 0.645821 5_1:+29478195 None:intergenic
TGGAGGTGTGTGTAGCATTG+GGG 0.646940 5_1:-29476984 Msa0727230:CDS
AAGGAGTATCAGGAACAACA+TGG 0.647046 5_1:+29469759 None:intergenic
TCGTTTGAGGAAAGATGTGT+TGG 0.647723 5_1:-29468976 Msa0727230:CDS
TCGTTTGAGGAAAGATGTGT+TGG 0.647723 5_1:-29477358 Msa0727230:CDS
GCCATCCACTCAGAAAGGAG+TGG 0.648100 5_1:-29468196 Msa0727230:CDS
GAAGGTGTTGGAGTTGCCTG+AGG 0.648237 5_1:-29477325 Msa0727230:CDS
TGAGGAACCATGGAAAGGGA+AGG 0.648812 5_1:-29468556 Msa0727230:CDS
GGAAGAAGAAATCAAGACAT+GGG 0.651030 5_1:+29469780 None:intergenic
AAGATGTGTTGGTGCCGTTG+AGG 0.652976 5_1:-29468965 Msa0727230:CDS
AAGATGTGTTGGTGCCGTTG+AGG 0.652976 5_1:-29477347 Msa0727230:CDS
AAGGACGTCAAGGATAACAA+AGG 0.653186 5_1:-29477765 Msa0727230:CDS
CAAAGGAAGAGTCAACGGAA+GGG 0.653236 5_1:+29469099 None:intergenic
CGAGGAACCATGGAAAGGGA+AGG 0.654288 5_1:-29476941 Msa0727230:intron
GTTGGTGTCCGAATTGAGTG+AGG 0.654872 5_1:-29468574 Msa0727230:CDS
TATGCATGGGACCCCTATGG+AGG 0.657200 5_1:-29477001 Msa0727230:CDS
TGGAAGAAGAAATCGAGACA+AGG 0.663800 5_1:+29478194 None:intergenic
GACGAAGACATCGTTAGTGG+TGG 0.664875 5_1:+29478316 None:intergenic
GCGTGATGGAGATGGTGAAG+TGG 0.668727 5_1:-29477112 Msa0727230:CDS
GATGAACACTGATTTCCAGA+AGG 0.669878 5_1:-29468442 Msa0727230:CDS
GATGAACACTGATTTCCAGA+AGG 0.669878 5_1:-29476827 Msa0727230:CDS
ACGTCAAGGATAACAAAGGG+TGG 0.670879 5_1:-29477761 Msa0727230:CDS
ATCGAGACAAGGGTTACCGG+TGG 0.672928 5_1:+29478205 None:intergenic
TCAGCTTCATGTGATTGAGG+GGG 0.673206 5_1:-29476896 Msa0727230:CDS
TGAGATTATAGGGTCTTTGG+GGG 0.673539 5_1:-29468748 Msa0727230:CDS
GCAAAACGCAGAAAGAAGAG+TGG 0.675176 5_1:-29477899 Msa0727230:CDS
GCCATCCACTCAGAAAGGAG+TGG 0.675952 5_1:-29476581 Msa0727230:CDS
TGTCTTAGTCGATCAAATGG+TGG 0.681041 5_1:-29469888 Msa0727230:CDS
GGAGGAATATGAAGGTGTGG+AGG 0.684289 5_1:-29477409 Msa0727230:intron
TCAGCTTCATGTGATTCAGG+GGG 0.686603 5_1:-29468511 Msa0727230:CDS
TGAAGTAACCAAAGTCAGCG+AGG 0.688387 5_1:+29469555 None:intergenic
TGAAGTAACCAAAGTCAGCG+AGG 0.688387 5_1:+29477970 None:intergenic
TGCTACACACACCTCCATAG+GGG 0.689495 5_1:+29476990 None:intergenic
TTACCGGTGGAGAGAAACGT+TGG 0.690822 5_1:+29478218 None:intergenic
TTTCTGAGTGGATGGCACCG+GGG 0.698885 5_1:+29468203 None:intergenic
TTTCTGAGTGGATGGCACCG+GGG 0.698885 5_1:+29476588 None:intergenic
CAACTAGTTTCTGATACTCG+GGG 0.701259 5_1:+29468076 None:intergenic
CAACTAGTTTCTGATACTCG+GGG 0.701259 5_1:+29476461 None:intergenic
GCAACCAAAACCCACCGATG+GGG 0.702541 5_1:-29469844 Msa0727230:CDS
CGGTACCACGAACACCACGA+AGG 0.704527 5_1:+29469663 None:intergenic
TGCCGGTACCACGAACACCA+CGG 0.707609 5_1:+29478075 None:intergenic
GAAGGTGTTGGAATTGCCTG+AGG 0.709397 5_1:-29468943 Msa0727230:CDS
TATGTGAGACCATTGCCAAG+AGG 0.711412 5_1:-29469061 Msa0727230:CDS
TGAGAGTATAGATCTCAGGT+GGG 0.716996 5_1:+29478396 None:intergenic
TTACCAGTAGAGAGAAACGT+TGG 0.717379 5_1:+29469803 None:intergenic
GGAACCGAAACCCACCGATG+GGG 0.722058 5_1:-29478259 Msa0727230:CDS
AAACTCGTCTGTAACCTCCG+TGG 0.731806 5_1:-29478092 Msa0727230:CDS
TCGTGAGGGATATGGATTGG+GGG 0.737160 5_1:-29468464 Msa0727230:CDS
GTTGGTGTCTGAATTGAACG+AGG 0.758083 5_1:-29476959 Msa0727230:CDS
TGTCAATGGGAATCTCAAGG+AGG 0.758838 5_1:-29468394 Msa0727230:CDS
TGTCAATGGGAATCTCAAGG+AGG 0.758838 5_1:-29476779 Msa0727230:CDS
CGGTACCACGAACACCACGG+AGG 0.805564 5_1:+29478078 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCAATTATAAACTTATT+TGG + chr5_1:29472814-29472833 None:intergenic 10.0%
!!! TTATTTTATAAACCTTTATT+TGG - chr5_1:29473712-29473731 Msa0727230:intron 10.0%
!!! AGTATTAGATTTTTTTTAAG+AGG - chr5_1:29470373-29470392 Msa0727230:intron 15.0%
!! TTTCTTAAATTCAATATCTA+TGG - chr5_1:29470990-29471009 Msa0727230:intron 15.0%
!!! AATAAGCATTATTTTAGATT+AGG - chr5_1:29472140-29472159 Msa0727230:intron 15.0%
!! AGATAAAATAGAAGAATTTA+TGG - chr5_1:29472905-29472924 Msa0727230:intron 15.0%
!!! AATGGTTTAAAGTTAAATAA+AGG - chr5_1:29473546-29473565 Msa0727230:intron 15.0%
!!! AAAATTGAAATTGACTTATA+TGG - chr5_1:29473601-29473620 Msa0727230:intron 15.0%
!! AAAATTGAATGATAAATAAC+AGG + chr5_1:29473682-29473701 None:intergenic 15.0%
!!! AACATATTGCAATATTTTAT+TGG + chr5_1:29473813-29473832 None:intergenic 15.0%
!! TGAATTACAATCAATATAAT+TGG + chr5_1:29473876-29473895 None:intergenic 15.0%
!!! TTAATTCTTTTATCTTATAG+AGG + chr5_1:29473943-29473962 None:intergenic 15.0%
!!! CTAAAGTTTTTTTTTTAATG+TGG + chr5_1:29475999-29476018 None:intergenic 15.0%
!!! TTTTTTAAGAATTCTTTGTT+TGG + chr5_1:29476032-29476051 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr5_1:29476169-29476188 None:intergenic 15.0%
!! AAACTAACTAATAGTTAATA+AGG + chr5_1:29476178-29476197 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr5_1:29476192-29476211 Msa0727230:intron 15.0%
!! AATCAAAATCAAAATCAAAA+GGG + chr5_1:29477070-29477089 None:intergenic 15.0%
!! AAATCAAAATCAAAATCAAA+AGG + chr5_1:29477071-29477090 None:intergenic 15.0%
!!! TTGATTTTGATTTTGATTTT+AGG - chr5_1:29477072-29477091 Msa0727230:CDS 15.0%
!! AAAACACTAAAAATTACAGA+AGG + chr5_1:29470063-29470082 None:intergenic 20.0%
!!! ATTTTTAGTGTTTTATTCAG+TGG - chr5_1:29470069-29470088 Msa0727230:intron 20.0%
!!! ACATTAGTAAGTTGATAAAA+AGG - chr5_1:29470093-29470112 Msa0727230:intron 20.0%
!!! TAAGTTGATAAAAAGGAAAT+AGG - chr5_1:29470100-29470119 Msa0727230:intron 20.0%
!! CTTATATAGAAAATAGAGAT+TGG + chr5_1:29470268-29470287 None:intergenic 20.0%
!!! GCTTCAAATTTAAAATTATC+AGG + chr5_1:29471673-29471692 None:intergenic 20.0%
!!! TGATACATAAAGTTTTAGTA+AGG - chr5_1:29471752-29471771 Msa0727230:intron 20.0%
!!! GATACATAAAGTTTTAGTAA+GGG - chr5_1:29471753-29471772 Msa0727230:intron 20.0%
!! AAAACCAATTTCGAAAAAAA+TGG + chr5_1:29473258-29473277 None:intergenic 20.0%
!!! TTTTTTTCGAAATTGGTTTT+TGG - chr5_1:29473258-29473277 Msa0727230:intron 20.0%
!!! CTGGAATTAATATCTTTTTT+GGG + chr5_1:29473459-29473478 None:intergenic 20.0%
!!! ACTGGAATTAATATCTTTTT+TGG + chr5_1:29473460-29473479 None:intergenic 20.0%
!! AACTAATGAAAATTGATATG+AGG + chr5_1:29473654-29473673 None:intergenic 20.0%
!!! TCATGTTTTATTTACATAGA+AGG + chr5_1:29473905-29473924 None:intergenic 20.0%
!! ACTCAAATAATAGAAAGAAT+GGG + chr5_1:29473971-29473990 None:intergenic 20.0%
!!! AATTCTCTAGTTTTATTCAA+GGG - chr5_1:29474462-29474481 Msa0727230:intron 20.0%
!! ATTTGAGTCAATTGTAAATT+TGG - chr5_1:29474529-29474548 Msa0727230:intron 20.0%
!! ACTAGAGAAAAAAAAAACAA+AGG - chr5_1:29475597-29475616 Msa0727230:intron 20.0%
!! TCATGATAAGATAAATACAA+CGG - chr5_1:29475688-29475707 Msa0727230:intron 20.0%
!!! ATCTTTTAGACATATTCTAT+TGG + chr5_1:29475742-29475761 None:intergenic 20.0%
!!! TAAAATAAGAAGCATAAATG+TGG + chr5_1:29475815-29475834 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr5_1:29476255-29476274 Msa0727230:intron 20.0%
!!! TATTGATGAAGATTTTCTTT+TGG + chr5_1:29477045-29477064 None:intergenic 20.0%
!! ATCAAAATCAAAATCAAAAG+GGG + chr5_1:29477069-29477088 None:intergenic 20.0%
! TTATTCCTCTCCTTAAAAAA+GGG + chr5_1:29468658-29468677 None:intergenic 25.0%
! TTTATTCCTCTCCTTAAAAA+AGG + chr5_1:29468659-29468678 None:intergenic 25.0%
! TCATGAAGAAACTTGAAATT+GGG + chr5_1:29468887-29468906 None:intergenic 25.0%
! ATCATGAAGAAACTTGAAAT+TGG + chr5_1:29468888-29468907 None:intergenic 25.0%
!! TTTTAGTGTATTACTTCGAT+AGG - chr5_1:29470475-29470494 Msa0727230:intron 25.0%
! TCAATATCTATGGAAAACTT+CGG - chr5_1:29471000-29471019 Msa0727230:intron 25.0%
! TAGAAATTAGAAGTCTGATA+AGG - chr5_1:29471145-29471164 Msa0727230:intron 25.0%
! AGAAATTAGAAGTCTGATAA+GGG - chr5_1:29471146-29471165 Msa0727230:intron 25.0%
! GTTAATGGGAATTATTAACA+GGG + chr5_1:29471455-29471474 None:intergenic 25.0%
! AGTTAATGGGAATTATTAAC+AGG + chr5_1:29471456-29471475 None:intergenic 25.0%
!! TTCCCATTAACTTATGTTTT+CGG - chr5_1:29471464-29471483 Msa0727230:intron 25.0%
! ATCCGAAAACATAAGTTAAT+GGG + chr5_1:29471469-29471488 None:intergenic 25.0%
! TGTGAGTTTATTATAGTAGT+TGG - chr5_1:29471488-29471507 Msa0727230:intron 25.0%
! TTGAGATTAACTTTATGTGT+TGG + chr5_1:29471808-29471827 None:intergenic 25.0%
! TTGCATATAATACTTCTACT+TGG - chr5_1:29471863-29471882 Msa0727230:intron 25.0%
! TGCATATAATACTTCTACTT+GGG - chr5_1:29471864-29471883 Msa0727230:intron 25.0%
! TTATTGTATAAACTGTGACA+AGG + chr5_1:29472230-29472249 None:intergenic 25.0%
!!! ACAACATTTTGAAGAAAAAG+TGG + chr5_1:29472299-29472318 None:intergenic 25.0%
! TCAAAATGTTGTAAGAACAT+CGG - chr5_1:29472307-29472326 Msa0727230:intron 25.0%
!!! TTAAAACTTTGAAACAGAAC+AGG - chr5_1:29472407-29472426 Msa0727230:intron 25.0%
!!! TTAGTTACTAACTTTTTCCA+GGG + chr5_1:29472552-29472571 None:intergenic 25.0%
!!! ATTAGTTACTAACTTTTTCC+AGG + chr5_1:29472553-29472572 None:intergenic 25.0%
!!! ACAAGTTGGTTTAATTAACA+AGG - chr5_1:29473230-29473249 Msa0727230:intron 25.0%
!! ATTCTAGAAGAGACATTAAA+TGG - chr5_1:29473528-29473547 Msa0727230:intron 25.0%
!!! CAATTTCAATTTTTCGAACT+AGG + chr5_1:29473594-29473613 None:intergenic 25.0%
! CACTCAAATAATAGAAAGAA+TGG + chr5_1:29473972-29473991 None:intergenic 25.0%
! ACAAAGGATTATTGAATACT+TGG + chr5_1:29474108-29474127 None:intergenic 25.0%
! TATTGTGATTTAGAAAACAC+AGG + chr5_1:29474377-29474396 None:intergenic 25.0%
! CTTGAATAAAACTAGAGAAT+TGG + chr5_1:29474463-29474482 None:intergenic 25.0%
!!! CAATTCTCTAGTTTTATTCA+AGG - chr5_1:29474461-29474480 Msa0727230:intron 25.0%
!!! ATTCTCTAGTTTTATTCAAG+GGG - chr5_1:29474463-29474482 Msa0727230:intron 25.0%
! AGGCAAAATTATTTACTTCA+TGG - chr5_1:29474497-29474516 Msa0727230:intron 25.0%
!!! GTTTTTTTTTTAATGTGGTG+TGG + chr5_1:29475994-29476013 None:intergenic 25.0%
!!! ATTCTTTGTTTGGTTTTAGT+GGG + chr5_1:29476022-29476041 None:intergenic 25.0%
!!! AATTCTTTGTTTGGTTTTAG+TGG + chr5_1:29476023-29476042 None:intergenic 25.0%
! TTATAGATATCGATATACGT+GGG + chr5_1:29476371-29476390 None:intergenic 25.0%
! TTTATAGATATCGATATACG+TGG + chr5_1:29476372-29476391 None:intergenic 25.0%
!!! GTAAAAATCGATGTTGATTT+GGG + chr5_1:29476400-29476419 None:intergenic 25.0%
!! TGTAAAAATCGATGTTGATT+TGG + chr5_1:29476401-29476420 None:intergenic 25.0%
!!! TTTGATTTTGATTTTAGGAG+AGG - chr5_1:29477077-29477096 Msa0727230:CDS 25.0%
! TCATGAAGAAACTTGAAATT+GGG + chr5_1:29468887-29468906 None:intergenic 25.0%
! ATCATGAAGAAACTTGAAAT+TGG + chr5_1:29468888-29468907 None:intergenic 25.0%
!!! TGTTTATTGGTTCTAATCAA+TGG - chr5_1:29477564-29477583 Msa0727230:CDS 25.0%
!!! GTTTATTGGTTCTAATCAAT+GGG - chr5_1:29477565-29477584 Msa0727230:CDS 25.0%
!!! TGTAGCAATGAAGTTTTATA+AGG - chr5_1:29477616-29477635 Msa0727230:CDS 25.0%
! ATTTTCATGAAACCATAGAG+CGG + chr5_1:29468462-29468481 None:intergenic 30.0%
! TGAAGATGAAGATTTCCTTT+TGG + chr5_1:29468630-29468649 None:intergenic 30.0%
TATTCCTCTCCTTAAAAAAG+GGG + chr5_1:29468657-29468676 None:intergenic 30.0%
!! TTTTGCTGATTGTTTGAAGA+AGG - chr5_1:29468922-29468941 Msa0727230:CDS 30.0%
!!! ATCTCGAGTTTTTGAAATCT+GGG - chr5_1:29468945-29468964 Msa0727230:CDS 30.0%
!! TGTTTATTGGTGCTAATCAA+TGG - chr5_1:29469182-29469201 Msa0727230:CDS 30.0%
!! GTTTATTGGTGCTAATCAAT+GGG - chr5_1:29469183-29469202 Msa0727230:CDS 30.0%
!! TTTATTGGTGCTAATCAATG+GGG - chr5_1:29469184-29469203 Msa0727230:CDS 30.0%
CTTCTCCTTATAAAACTTCA+TGG + chr5_1:29469242-29469261 None:intergenic 30.0%
!!! GAAGTTTTTGAAGCATGATA+AGG - chr5_1:29469258-29469277 Msa0727230:CDS 30.0%
! ACTAGGAAGTATAGAAAGAA+AGG - chr5_1:29469817-29469836 Msa0727230:CDS 30.0%
! CTAGGAAGTATAGAAAGAAA+GGG - chr5_1:29469818-29469837 Msa0727230:CDS 30.0%
AAGTATAGAAAGAAAGGGTA+TGG - chr5_1:29469823-29469842 Msa0727230:CDS 30.0%
AGATTCCAAAAAACTATCTG+AGG + chr5_1:29469859-29469878 None:intergenic 30.0%
ACATTGTTCTTGGATAATGA+AGG - chr5_1:29469958-29469977 Msa0727230:CDS 30.0%
! AGTGCGTTTTTAATGCAAAT+TGG - chr5_1:29470199-29470218 Msa0727230:intron 30.0%
AAAGGTAACACAAATGAAAG+AGG + chr5_1:29470228-29470247 None:intergenic 30.0%
!!! TACCTTTTATTTTGTCCTTC+AGG - chr5_1:29470241-29470260 Msa0727230:intron 30.0%
ATTAGATATAAGTTGTGTGC+AGG - chr5_1:29470297-29470316 Msa0727230:intron 30.0%
TTAGATATAAGTTGTGTGCA+GGG - chr5_1:29470298-29470317 Msa0727230:intron 30.0%
GAATAACAGTGAACACATTA+AGG - chr5_1:29470345-29470364 Msa0727230:intron 30.0%
GATCATGTAATTCATAGTAG+AGG - chr5_1:29470395-29470414 Msa0727230:intron 30.0%
!!! CTAACAAACAGTTTTTTCAG+TGG + chr5_1:29470455-29470474 None:intergenic 30.0%
!!! ACAGCTACATTTTTGTTTTG+AGG + chr5_1:29470614-29470633 None:intergenic 30.0%
! AGATTAACAGAGATGTTTTC+TGG + chr5_1:29470699-29470718 None:intergenic 30.0%
!! AGAGGAAATCACTTTTCAAA+TGG + chr5_1:29470794-29470813 None:intergenic 30.0%
TTCACAAGATGAAATCTTGT+TGG + chr5_1:29470944-29470963 None:intergenic 30.0%
TCTAATTTACCACATACATG+TGG - chr5_1:29471208-29471227 Msa0727230:intron 30.0%
ATCTTTCAAATGCATAAACC+AGG - chr5_1:29471249-29471268 Msa0727230:intron 30.0%
TCTTTCAAATGCATAAACCA+GGG - chr5_1:29471250-29471269 Msa0727230:intron 30.0%
CATCCGAAAACATAAGTTAA+TGG + chr5_1:29471470-29471489 None:intergenic 30.0%
! CTTTGGCAATTAGTTTATGA+TGG - chr5_1:29471525-29471544 Msa0727230:intron 30.0%
!!! TGGTTTTGAAGAATTCGTAA+CGG - chr5_1:29471635-29471654 Msa0727230:intron 30.0%
TATTTCACTGGTGTAAAGTT+GGG - chr5_1:29471781-29471800 Msa0727230:intron 30.0%
CTACTTGGGTAAAAGTTATT+TGG - chr5_1:29471878-29471897 Msa0727230:intron 30.0%
!!! TACTTGTCTTTTTTCTTGTC+CGG - chr5_1:29472024-29472043 Msa0727230:intron 30.0%
! TCTAAGACTATAGAAATACC+CGG + chr5_1:29472046-29472065 None:intergenic 30.0%
AGTAGTTTAGTAGTGAGTAA+AGG + chr5_1:29472081-29472100 None:intergenic 30.0%
AATATCTCCGATGTTCTTAT+TGG - chr5_1:29472107-29472126 Msa0727230:intron 30.0%
ATGAACAGTTTAAGAGAATG+AGG - chr5_1:29472349-29472368 Msa0727230:intron 30.0%
ATATTTCATTGTGTCTCTCT+TGG - chr5_1:29472512-29472531 Msa0727230:intron 30.0%
! CTTACTGTTTTCTATATGCA+CGG - chr5_1:29472783-29472802 Msa0727230:intron 30.0%
AAAATTTACACCTTCACATG+TGG + chr5_1:29472846-29472865 None:intergenic 30.0%
ATCTTACCAACATTAACATC+TGG + chr5_1:29472889-29472908 None:intergenic 30.0%
!!! TTTTCGAAATTGGTTTTTGG+CGG - chr5_1:29473261-29473280 Msa0727230:intron 30.0%
! TTAATTCCAGTAGCTCTTTT+TGG - chr5_1:29473469-29473488 Msa0727230:intron 30.0%
GGAGATATTTCCTTATAAGT+TGG - chr5_1:29473622-29473641 Msa0727230:intron 30.0%
AACTACTATCAGCCAAATAA+AGG + chr5_1:29473727-29473746 None:intergenic 30.0%
CACAACTAACTATGATACTT+TGG - chr5_1:29473787-29473806 Msa0727230:intron 30.0%
CTTCAATGTTATATGATCTG+CGG + chr5_1:29473850-29473869 None:intergenic 30.0%
TATGAAAGGAGGATTTACAA+AGG + chr5_1:29474124-29474143 None:intergenic 30.0%
TTGAAATTCTCTGCTTTCAA+AGG + chr5_1:29474147-29474166 None:intergenic 30.0%
TATGGCAATTATGTCACAAT+AGG - chr5_1:29474213-29474232 Msa0727230:intron 30.0%
ATGTCACAATAGGATATCTA+TGG - chr5_1:29474223-29474242 Msa0727230:intron 30.0%
ATTTAGAAAACACAGGTCAT+TGG + chr5_1:29474370-29474389 None:intergenic 30.0%
CACAATATACTTCAGCAAAA+TGG - chr5_1:29474390-29474409 Msa0727230:intron 30.0%
! TAGAGAATTGGCTTAAATGT+TGG + chr5_1:29474451-29474470 None:intergenic 30.0%
!!! ATTGGTAGGTGCAATTTTTT+TGG - chr5_1:29474663-29474682 Msa0727230:intron 30.0%
! CAAATCAATTTTCCATGGAT+AGG + chr5_1:29475105-29475124 None:intergenic 30.0%
! AACGTCAAATCAATTTTCCA+TGG + chr5_1:29475110-29475129 None:intergenic 30.0%
!! GAAAATTGATTTGACGTTGA+AGG - chr5_1:29475112-29475131 Msa0727230:intron 30.0%
TTGAAATCGCCAAATAAAAG+AGG - chr5_1:29475283-29475302 Msa0727230:intron 30.0%
! TCTAGTTTCTCTCTAAATTC+TGG + chr5_1:29475583-29475602 None:intergenic 30.0%
!! TTCATTGATTCTAATCCATG+AGG - chr5_1:29475635-29475654 Msa0727230:intron 30.0%
TATAAACATTGTATGCCTCA+TGG + chr5_1:29475653-29475672 None:intergenic 30.0%
GAGGCATACAATGTTTATAT+AGG - chr5_1:29475654-29475673 Msa0727230:intron 30.0%
ATGACTCATCTTAATCTAGA+AGG + chr5_1:29475766-29475785 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr5_1:29476086-29476105 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr5_1:29476087-29476106 Msa0727230:intron 30.0%
! ATTTTCATGAAACCATAGAG+CGG + chr5_1:29468462-29468481 None:intergenic 30.0%
!!! CTTTCTTGTTTTTGTTGTTG+TGG + chr5_1:29477124-29477143 None:intergenic 30.0%
!! TTTTGCTGATTGTTTGAAGA+AGG - chr5_1:29468922-29468941 Msa0727230:CDS 30.0%
!!! ATCTCGAGTTTTTGAAATCT+GGG - chr5_1:29468945-29468964 Msa0727230:CDS 30.0%
GGATTTGATTCCTTACAATA+GGG - chr5_1:29477586-29477605 Msa0727230:CDS 30.0%
!!! GAAGTTTTTGAAGCATGATA+AGG - chr5_1:29469258-29469277 Msa0727230:CDS 30.0%
!! GTTGATGATTTGCTTAAGAA+AGG - chr5_1:29477803-29477822 Msa0727230:CDS 30.0%
ACATTGTTCTTGGATAATGA+AGG - chr5_1:29469958-29469977 Msa0727230:CDS 30.0%
! GATTTGAGAGTATAGATCTC+AGG + chr5_1:29468095-29468114 None:intergenic 35.0%
AAAGGAAATCTGGATCCAAA+AGG - chr5_1:29468612-29468631 Msa0727230:CDS 35.0%
TGTTGTTGTAGTTCTTGTTG+TGG + chr5_1:29468700-29468719 None:intergenic 35.0%
CAACAAGAACTACAACAACA+AGG - chr5_1:29468700-29468719 Msa0727230:CDS 35.0%
!!! GATCTCGAGTTTTTGAAATC+TGG - chr5_1:29468944-29468963 Msa0727230:CDS 35.0%
AAATCAGTCTTGCTGCTAAA+TGG - chr5_1:29468978-29468997 Msa0727230:CDS 35.0%
GGGTTTGATTCCTTACAATA+GGG - chr5_1:29469204-29469223 Msa0727230:CDS 35.0%
!! TGTGGCCATGAAGTTTTATA+AGG - chr5_1:29469234-29469253 Msa0727230:CDS 35.0%
!!! TTTTGAAGCATGATAAGGAG+AGG - chr5_1:29469263-29469282 Msa0727230:CDS 35.0%
AAAGACTCTATAATCTCGTG+AGG + chr5_1:29469352-29469371 None:intergenic 35.0%
ATTATAGAGTCTTTGCGTGA+TGG - chr5_1:29469358-29469377 Msa0727230:CDS 35.0%
!! GTTGATGATTTGCTCAAGAA+GGG - chr5_1:29469418-29469437 Msa0727230:CDS 35.0%
GATCTTTGTCTTTAGTGACA+TGG - chr5_1:29469744-29469763 Msa0727230:CDS 35.0%
TATACTTCCTAGTGATTGCT+TGG + chr5_1:29469810-29469829 None:intergenic 35.0%
! ACAACTAGTTTCTGATACTC+GGG + chr5_1:29470027-29470046 None:intergenic 35.0%
! CACAACTAGTTTCTGATACT+CGG + chr5_1:29470028-29470047 None:intergenic 35.0%
! CTACTGCTTGATTTGATTGT+TGG - chr5_1:29470139-29470158 Msa0727230:intron 35.0%
GTCCTGAAGGACAAAATAAA+AGG + chr5_1:29470246-29470265 None:intergenic 35.0%
! AAAATAGAGATTGGTCCTGA+AGG + chr5_1:29470259-29470278 None:intergenic 35.0%
GAAATCGAAGTTCTATTTGC+AGG - chr5_1:29470529-29470548 Msa0727230:intron 35.0%
TTCCTCTATTAGAGACTCAT+AGG - chr5_1:29470807-29470826 Msa0727230:intron 35.0%
TCCTCTATTAGAGACTCATA+GGG - chr5_1:29470808-29470827 Msa0727230:intron 35.0%
TTCCTCTATTAGAGACTCAT+AGG - chr5_1:29470807-29470826 Msa0727230:intron 35.0%
AACCTATGAGTCTCTAATAG+AGG + chr5_1:29470840-29470859 None:intergenic 35.0%
CTACATTCCAACTCCATAAA+TGG + chr5_1:29471027-29471046 None:intergenic 35.0%
GGAATGTAGTACTTATCCTA+TGG - chr5_1:29471038-29471057 Msa0727230:intron 35.0%
AAGTGTTTCATCTGTTACCA+TGG + chr5_1:29471065-29471084 None:intergenic 35.0%
TGTGTGAATAAATAGTTCCC+TGG + chr5_1:29471270-29471289 None:intergenic 35.0%
TTATAGTAGTTGGCAAACCA+TGG - chr5_1:29471498-29471517 Msa0727230:intron 35.0%
! ATTAGTTTATGATGGCGTGA+TGG - chr5_1:29471533-29471552 Msa0727230:intron 35.0%
TTGTGAACAAGGTTATTGCA+AGG + chr5_1:29471586-29471605 None:intergenic 35.0%
GGCACAAATTTCTCAATTTC+TGG - chr5_1:29471615-29471634 Msa0727230:intron 35.0%
!! CATAAAGTTTTAGTAAGGGC+TGG - chr5_1:29471757-29471776 Msa0727230:intron 35.0%
CTATTTCACTGGTGTAAAGT+TGG - chr5_1:29471780-29471799 Msa0727230:intron 35.0%
!! AAGTTATTTGGTGCATTTGC+TGG - chr5_1:29471890-29471909 Msa0727230:intron 35.0%
CTTAAGTCTGAAAAGGACTT+TGG + chr5_1:29471927-29471946 None:intergenic 35.0%
! CAAAGTCCTTTTCAGACTTA+AGG - chr5_1:29471925-29471944 Msa0727230:intron 35.0%
TTTGGACCTTAAGTCTGAAA+AGG + chr5_1:29471934-29471953 None:intergenic 35.0%
CTTAAGGTCCAAATTACTGA+AGG - chr5_1:29471941-29471960 Msa0727230:intron 35.0%
TGTGGATTCCTTCAGTAATT+TGG + chr5_1:29471952-29471971 None:intergenic 35.0%
!!! ACTTGTCTTTTTTCTTGTCC+GGG - chr5_1:29472025-29472044 Msa0727230:intron 35.0%
!! GGAGTATTGAAGTTCTTGTA+AGG - chr5_1:29472161-29472180 Msa0727230:intron 35.0%
GGATTTACTTTGTCTATCTC+TGG - chr5_1:29472182-29472201 Msa0727230:intron 35.0%
TACTAAATCCCATTTCGATG+TGG + chr5_1:29472377-29472396 None:intergenic 35.0%
ATTGTGATACTGTGATACAG+TGG - chr5_1:29472431-29472450 Msa0727230:intron 35.0%
! CTTTTTCCAGGGATTAACTT+GGG + chr5_1:29472541-29472560 None:intergenic 35.0%
!! ACTTTTTCCAGGGATTAACT+TGG + chr5_1:29472542-29472561 None:intergenic 35.0%
TACCAACATTAACATCTGGA+GGG + chr5_1:29472885-29472904 None:intergenic 35.0%
TTACCAACATTAACATCTGG+AGG + chr5_1:29472886-29472905 None:intergenic 35.0%
!! GACCTCTAAAACCTTTATTG+TGG - chr5_1:29473016-29473035 Msa0727230:intron 35.0%
!! AGCCACAATAAAGGTTTTAG+AGG + chr5_1:29473021-29473040 None:intergenic 35.0%
CTTTATTGTGGCTGTAGTTT+GGG - chr5_1:29473028-29473047 Msa0727230:intron 35.0%
TGTTTGCAAGCAAATTGGAA+GGG + chr5_1:29473211-29473230 None:intergenic 35.0%
ACTTGTGTTTGCAAGCAAAT+TGG + chr5_1:29473216-29473235 None:intergenic 35.0%
ATTTGCTTGCAAACACAAGT+TGG - chr5_1:29473216-29473235 Msa0727230:intron 35.0%
!!! GGAGCCATTTTTTTCGAAAT+TGG - chr5_1:29473251-29473270 Msa0727230:intron 35.0%
!!! TTTCGAAATTGGTTTTTGGC+GGG - chr5_1:29473262-29473281 Msa0727230:intron 35.0%
TTGAAAATAGACATCAACCC+TGG - chr5_1:29473309-29473328 Msa0727230:intron 35.0%
GAAAAAGGGGAGAATTTCTT+GGG - chr5_1:29473335-29473354 Msa0727230:intron 35.0%
TCCATCTGATCTAATTGATG+TGG - chr5_1:29473384-29473403 Msa0727230:intron 35.0%
ACCACATCAATTAGATCAGA+TGG + chr5_1:29473388-29473407 None:intergenic 35.0%
AAAGACTCTCAACATAACCA+TGG - chr5_1:29473492-29473511 Msa0727230:intron 35.0%
GAATAGTAGATGGATATCCA+TGG + chr5_1:29473512-29473531 None:intergenic 35.0%
!! GTCTCTTCTAGAATAGTAGA+TGG + chr5_1:29473522-29473541 None:intergenic 35.0%
!! TTATTACGCTCTGAGCTTTT+AGG - chr5_1:29474009-29474028 Msa0727230:intron 35.0%
ACATTCTCCTTTGGTTACTT+GGG + chr5_1:29474040-29474059 None:intergenic 35.0%
! TCTGCTTTCAAAGGTATGAA+AGG + chr5_1:29474138-29474157 None:intergenic 35.0%
CAAACACGACTACTTTCAAT+GGG + chr5_1:29474193-29474212 None:intergenic 35.0%
ACAAACACGACTACTTTCAA+TGG + chr5_1:29474194-29474213 None:intergenic 35.0%
TGAAAGTAGTCGTGTTTGTA+TGG - chr5_1:29474195-29474214 Msa0727230:intron 35.0%
CTATGGAAGATACCATATTC+AGG - chr5_1:29474240-29474259 Msa0727230:intron 35.0%
CCAATAATAACGCCTGAATA+TGG + chr5_1:29474255-29474274 None:intergenic 35.0%
CCATATTCAGGCGTTATTAT+TGG - chr5_1:29474252-29474271 Msa0727230:intron 35.0%
!!! GTTTTTTTTGACCGAAAGAG+AGG - chr5_1:29474287-29474306 Msa0727230:intron 35.0%
! AGAATTGGCTTAAATGTTGG+CGG + chr5_1:29474448-29474467 None:intergenic 35.0%
TCGTTGGATGATATGCTTAA+TGG - chr5_1:29474591-29474610 Msa0727230:intron 35.0%
!!! GTGCAATTTTTTTGGATGTG+TGG - chr5_1:29474671-29474690 Msa0727230:intron 35.0%
TGCAATTCTTCTTTAGCTGA+AGG - chr5_1:29474897-29474916 Msa0727230:intron 35.0%
! CATACAACAACGAAGTATCA+AGG + chr5_1:29475009-29475028 None:intergenic 35.0%
TTTCAAATGTGACCTATCCA+TGG - chr5_1:29475090-29475109 Msa0727230:intron 35.0%
!! AATTGATTTGACGTTGAAGG+TGG - chr5_1:29475115-29475134 Msa0727230:intron 35.0%
AAATCGCCAAATAAAAGAGG+TGG - chr5_1:29475286-29475305 Msa0727230:intron 35.0%
! CATTCACCACCTCTTTTATT+TGG + chr5_1:29475295-29475314 None:intergenic 35.0%
ACGACATCAATATGTGGATT+GGG + chr5_1:29475321-29475340 None:intergenic 35.0%
GTGATTCAAATGGCTATTGA+TGG + chr5_1:29475460-29475479 None:intergenic 35.0%
!! TGGTTTTACGGTGATTCAAA+TGG + chr5_1:29475470-29475489 None:intergenic 35.0%
!! ATGGGGATTTCATGGTTTTA+CGG + chr5_1:29475482-29475501 None:intergenic 35.0%
TCGAATTGGGTCTAATCATT+TGG + chr5_1:29475546-29475565 None:intergenic 35.0%
GTTGTTAAGAGCTGAGTAAT+AGG + chr5_1:29475843-29475862 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr5_1:29476217-29476236 Msa0727230:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr5_1:29476221-29476240 Msa0727230:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr5_1:29476309-29476328 Msa0727230:intron 35.0%
!! AAAATCGATGTTGATTTGGG+TGG + chr5_1:29476397-29476416 None:intergenic 35.0%
GAGAGGAGAAAGATGAAATT+TGG + chr5_1:29476459-29476478 None:intergenic 35.0%
GATTTGAGAGAATAGATCTC+AGG + chr5_1:29476516-29476535 None:intergenic 35.0%
GGAAGAAGAAATCAAGACAT+GGG + chr5_1:29476707-29476726 None:intergenic 35.0%
TGGAAGAAGAAATCAAGACA+TGG + chr5_1:29476708-29476727 None:intergenic 35.0%
! AAGGTTACAGACGAGTTTTA+GGG + chr5_1:29476805-29476824 None:intergenic 35.0%
! TTTCTGCATTTTGCGAACTT+TGG + chr5_1:29476994-29477013 None:intergenic 35.0%
!!! GATCTCGAGTTTTTGAAATC+TGG - chr5_1:29468944-29468963 Msa0727230:CDS 35.0%
AAATCAGTCTTGCTGCTAAA+TGG - chr5_1:29468978-29468997 Msa0727230:CDS 35.0%
TTAGAACCAATAAACACCTC+AGG + chr5_1:29477560-29477579 None:intergenic 35.0%
GGGATTTGATTCCTTACAAT+AGG - chr5_1:29477585-29477604 Msa0727230:CDS 35.0%
TTTGATTCCTTACAATAGGG+TGG - chr5_1:29469207-29469226 Msa0727230:CDS 35.0%
!!! TTTTGAAGCATGATAAGGAG+AGG - chr5_1:29469263-29469282 Msa0727230:CDS 35.0%
TTGCTTCCTCATGAGATTAT+AGG - chr5_1:29477725-29477744 Msa0727230:intron 35.0%
TGCTTCCTCATGAGATTATA+GGG - chr5_1:29477726-29477745 Msa0727230:intron 35.0%
AAAGACCCTATAATCTCATG+AGG + chr5_1:29477734-29477753 None:intergenic 35.0%
TCATGAGATTATAGGGTCTT+TGG - chr5_1:29477733-29477752 Msa0727230:intron 35.0%
CATGAGATTATAGGGTCTTT+GGG - chr5_1:29477734-29477753 Msa0727230:intron 35.0%
ATGAGATTATAGGGTCTTTG+GGG - chr5_1:29477735-29477754 Msa0727230:intron 35.0%
TATACTTCCTAGTGATTGCT+TGG + chr5_1:29469810-29469829 None:intergenic 35.0%
AGATTCCAAAAGACTATCTG+AGG + chr5_1:29478244-29478263 None:intergenic 35.0%
! ACAACTAGTTTCTGATACTC+GGG + chr5_1:29470027-29470046 None:intergenic 35.0%
! CACAACTAGTTTCTGATACT+CGG + chr5_1:29470028-29470047 None:intergenic 35.0%
! TGAGAGTATAGATCTCAGGT+GGG + chr5_1:29468091-29468110 None:intergenic 40.0%
! TTGAGAGTATAGATCTCAGG+TGG + chr5_1:29468092-29468111 None:intergenic 40.0%
CCTTGGAAGAGAATTGAAGT+TGG + chr5_1:29468207-29468226 None:intergenic 40.0%
CCAACTTCAATTCTCTTCCA+AGG - chr5_1:29468204-29468223 Msa0727230:CDS 40.0%
! ATGTTTTCAGTCAACCCCAT+CGG + chr5_1:29468242-29468261 None:intergenic 40.0%
GGAAGAAGAAATCGAGACAA+GGG + chr5_1:29468292-29468311 None:intergenic 40.0%
TGGAAGAAGAAATCGAGACA+AGG + chr5_1:29468293-29468312 None:intergenic 40.0%
AGCATAGAAGCCTTCTTTGT+TGG + chr5_1:29468438-29468457 None:intergenic 40.0%
! ACATTGGAAGCTAGGGTTTT+AGG + chr5_1:29468488-29468507 None:intergenic 40.0%
!!! CTTCATCAGCCCCTTTTTTA+AGG - chr5_1:29468645-29468664 Msa0727230:CDS 40.0%
! TGTTGTAGTTCTTGTTGTGG+TGG + chr5_1:29468697-29468716 None:intergenic 40.0%
AAGGACGTCAAGGATAACAA+AGG - chr5_1:29468719-29468738 Msa0727230:CDS 40.0%
AGGACGTCAAGGATAACAAA+GGG - chr5_1:29468720-29468739 Msa0727230:CDS 40.0%
AAGGATAACAAAGGGTGGAA+GGG - chr5_1:29468728-29468747 Msa0727230:CDS 40.0%
!! ATGCTTTGAAGGAAGAGAAG+AGG - chr5_1:29468819-29468838 Msa0727230:CDS 40.0%
ATCAACAAGCTTCTTAGCCA+AGG + chr5_1:29468849-29468868 None:intergenic 40.0%
!! GCAGCAAGACTGATTTTTGT+GGG + chr5_1:29468974-29468993 None:intergenic 40.0%
!! AGCAGCAAGACTGATTTTTG+TGG + chr5_1:29468975-29468994 None:intergenic 40.0%
TCGTTTGAGGAAAGATGTGT+TGG - chr5_1:29469126-29469145 Msa0727230:CDS 40.0%
TTAGCACCAATAAACACCTC+AGG + chr5_1:29469178-29469197 None:intergenic 40.0%
GGGGTTTGATTCCTTACAAT+AGG - chr5_1:29469203-29469222 Msa0727230:CDS 40.0%
ACAGAAGCAACCCTATTGTA+AGG + chr5_1:29469217-29469236 None:intergenic 40.0%
TTACAATAGGGTTGCTTCTG+TGG - chr5_1:29469216-29469235 Msa0727230:CDS 40.0%
!! CGTTGATGATTTGCTCAAGA+AGG - chr5_1:29469417-29469436 Msa0727230:CDS 40.0%
GTAATAACCTTCCCTTTCCA+TGG + chr5_1:29469553-29469572 None:intergenic 40.0%
GGAAGGTTATTACTTTCAGC+AGG - chr5_1:29469560-29469579 Msa0727230:CDS 40.0%
AGTCCAAGACAAAGTTTGTG+AGG - chr5_1:29469620-29469639 Msa0727230:CDS 40.0%
GTTCCTCACAAACTTTGTCT+TGG + chr5_1:29469626-29469645 None:intergenic 40.0%
GACAAAGTTTGTGAGGAACA+TGG - chr5_1:29469627-29469646 Msa0727230:CDS 40.0%
AGTTTGTGAGGAACATGGAT+TGG - chr5_1:29469632-29469651 Msa0727230:CDS 40.0%
GTTTGTGAGGAACATGGATT+GGG - chr5_1:29469633-29469652 Msa0727230:CDS 40.0%
! TTTGTGAGGAACATGGATTG+GGG - chr5_1:29469634-29469653 Msa0727230:CDS 40.0%
!! GATGAACACTGATTTCCAGA+AGG - chr5_1:29469657-29469676 Msa0727230:CDS 40.0%
ATATGCGATCAAACACCTTC+TGG + chr5_1:29469675-29469694 None:intergenic 40.0%
!! GAAGGTGTTTGATCGCATAT+TGG - chr5_1:29469675-29469694 Msa0727230:CDS 40.0%
GTTTGATCGCATATTGGATG+TGG - chr5_1:29469681-29469700 Msa0727230:CDS 40.0%
ATATTGGATGTGGCTGTCAA+TGG - chr5_1:29469691-29469710 Msa0727230:CDS 40.0%
TATTGGATGTGGCTGTCAAT+GGG - chr5_1:29469692-29469711 Msa0727230:CDS 40.0%
AGGAGGATCAGATGATTAAG+AGG - chr5_1:29469722-29469741 Msa0727230:CDS 40.0%
! CCTAGTGATTGCTTGGTAAT+CGG + chr5_1:29469803-29469822 None:intergenic 40.0%
!!! CTGTGCCTCAGATAGTTTTT+TGG - chr5_1:29469851-29469870 Msa0727230:CDS 40.0%
GAATCTGCTGACATTGTTCT+TGG - chr5_1:29469948-29469967 Msa0727230:CDS 40.0%
! CAACTAGTTTCTGATACTCG+GGG + chr5_1:29470026-29470045 None:intergenic 40.0%
GTATCAGAAACTAGTTGTGC+TGG - chr5_1:29470029-29470048 Msa0727230:intron 40.0%
ATATAAGTTGTGTGCAGGGA+AGG - chr5_1:29470302-29470321 Msa0727230:intron 40.0%
TATAAGTTGTGTGCAGGGAA+GGG - chr5_1:29470303-29470322 Msa0727230:intron 40.0%
ACCCTATGAGTCTCTAATAG+AGG + chr5_1:29470812-29470831 None:intergenic 40.0%
! GACTCATAGGTTTTTGTGCA+AGG - chr5_1:29470848-29470867 Msa0727230:intron 40.0%
ACGACAGGACTATCAATTCA+AGG + chr5_1:29470901-29470920 None:intergenic 40.0%
TGATGCAGAATAAGAACGAC+AGG + chr5_1:29470916-29470935 None:intergenic 40.0%
GGAAAACTTCGGTCCATTTA+TGG - chr5_1:29471011-29471030 Msa0727230:intron 40.0%
AGTACTTATCCTATGGTCCA+TGG - chr5_1:29471045-29471064 Msa0727230:intron 40.0%
TGAAACACTTGCTCTTCAGT+CGG - chr5_1:29471075-29471094 Msa0727230:intron 40.0%
!!! TACCATGGAACTGGCTTTTT+AGG - chr5_1:29471117-29471136 Msa0727230:intron 40.0%
!!! ACCATGGAACTGGCTTTTTA+GGG - chr5_1:29471118-29471137 Msa0727230:intron 40.0%
GAAACTCTTCCACATGTATG+TGG + chr5_1:29471220-29471239 None:intergenic 40.0%
CTCAAGACAGCATAATGCAT+TGG - chr5_1:29471307-29471326 Msa0727230:intron 40.0%
AAGACAGCATAATGCATTGG+AGG - chr5_1:29471310-29471329 Msa0727230:intron 40.0%
GATGTATTAGATCAGCAAGC+AGG - chr5_1:29471344-29471363 Msa0727230:intron 40.0%
TGCATACAACTGCTTATGCA+TGG - chr5_1:29471399-29471418 Msa0727230:intron 40.0%
CCTTGACTCATTTGTGAACA+AGG + chr5_1:29471597-29471616 None:intergenic 40.0%
CCTTGTTCACAAATGAGTCA+AGG - chr5_1:29471594-29471613 Msa0727230:intron 40.0%
CAAGTTTCTCATCTCATCAC+TGG + chr5_1:29471717-29471736 None:intergenic 40.0%
CACACATCATACTAAGCTTG+TGG + chr5_1:29471970-29471989 None:intergenic 40.0%
ATCTCCGATGTTCTTATTGG+TGG - chr5_1:29472110-29472129 Msa0727230:intron 40.0%
TCTCCGATGTTCTTATTGGT+GGG - chr5_1:29472111-29472130 Msa0727230:intron 40.0%
TTTGTCTATCTCTGGATGAC+AGG - chr5_1:29472190-29472209 Msa0727230:intron 40.0%
TTGTCTATCTCTGGATGACA+GGG - chr5_1:29472191-29472210 Msa0727230:intron 40.0%
CTGTGACAAGGCATAAAAGA+TGG + chr5_1:29472218-29472237 None:intergenic 40.0%
! GAACATCGGTCAGTATTGAA+TGG - chr5_1:29472321-29472340 Msa0727230:intron 40.0%
! TACATACTGTTGCTTACGCA+TGG - chr5_1:29472758-29472777 Msa0727230:intron 40.0%
TAGTAATCAGCCACATGTGA+AGG - chr5_1:29472833-29472852 Msa0727230:intron 40.0%
AACCCTCCAGATGTTAATGT+TGG - chr5_1:29472880-29472899 Msa0727230:intron 40.0%
TTGCGGTTACAATACCGTTA+CGG - chr5_1:29472992-29473011 Msa0727230:intron 40.0%
CCAAACTACAGCCACAATAA+AGG + chr5_1:29473030-29473049 None:intergenic 40.0%
CCTTTATTGTGGCTGTAGTT+TGG - chr5_1:29473027-29473046 Msa0727230:intron 40.0%
AAGCAAATTGGAAGGGATGA+GGG + chr5_1:29473204-29473223 None:intergenic 40.0%
GTGTTTGCAAGCAAATTGGA+AGG + chr5_1:29473212-29473231 None:intergenic 40.0%
AAATAGACATCAACCCTGGT+TGG - chr5_1:29473313-29473332 Msa0727230:intron 40.0%
ATCAACCCTGGTTGGAAAAA+GGG - chr5_1:29473321-29473340 Msa0727230:intron 40.0%
GGAAAAAGGGGAGAATTTCT+TGG - chr5_1:29473334-29473353 Msa0727230:intron 40.0%
! ACCTCATGCTTTGTTCAAGA+GGG - chr5_1:29473417-29473436 Msa0727230:intron 40.0%
TTGTTCAAGAGGGATGGAAA+TGG - chr5_1:29473427-29473446 Msa0727230:intron 40.0%
GTCTTTCCAAAAAGAGCTAC+TGG + chr5_1:29473478-29473497 None:intergenic 40.0%
GAGGCAGATTCCAACTTATA+AGG + chr5_1:29473635-29473654 None:intergenic 40.0%
AAGCTCAGAGCGTAATAAGT+TGG + chr5_1:29474007-29474026 None:intergenic 40.0%
CACATTCTCCTTTGGTTACT+TGG + chr5_1:29474041-29474060 None:intergenic 40.0%
! GCTTTCAAAGGTATGAAAGG+AGG + chr5_1:29474135-29474154 None:intergenic 40.0%
TTCAGGCGTTATTATTGGAG+AGG - chr5_1:29474257-29474276 Msa0727230:intron 40.0%
CAACAACACATCCTCTCTTT+CGG + chr5_1:29474301-29474320 None:intergenic 40.0%
! GATGTGTTGTTGTGTATCAG+TGG - chr5_1:29474309-29474328 Msa0727230:intron 40.0%
TTGTTGTGTATCAGTGGTTG+TGG - chr5_1:29474315-29474334 Msa0727230:intron 40.0%
TGTTGTGTATCAGTGGTTGT+GGG - chr5_1:29474316-29474335 Msa0727230:intron 40.0%
TTATTCAAGGGGAAGACTTG+CGG - chr5_1:29474474-29474493 Msa0727230:intron 40.0%
! ATTTGGAATGCTCGCGATAA+AGG - chr5_1:29474546-29474565 Msa0727230:intron 40.0%
CCAACGATATTGTCTTTCCT+TGG + chr5_1:29474578-29474597 None:intergenic 40.0%
CCAAGGAAAGACAATATCGT+TGG - chr5_1:29474575-29474594 Msa0727230:intron 40.0%
TCGTTGTTGTATGTGATCAG+TGG - chr5_1:29475016-29475035 Msa0727230:intron 40.0%
! CAAATTGATTCAACGTCCAC+CGG - chr5_1:29475239-29475258 Msa0727230:intron 40.0%
! TGAGTTCAGGGAAATTTTGC+CGG + chr5_1:29475261-29475280 None:intergenic 40.0%
CACGACATCAATATGTGGAT+TGG + chr5_1:29475322-29475341 None:intergenic 40.0%
CAATCCACATATTGATGTCG+TGG - chr5_1:29475320-29475339 Msa0727230:intron 40.0%
GTATCCACGACATCAATATG+TGG + chr5_1:29475327-29475346 None:intergenic 40.0%
! TTGATGGATACTTTGCATCG+AGG + chr5_1:29475444-29475463 None:intergenic 40.0%
GATTAGACCCAATTCGAGTA+AGG - chr5_1:29475549-29475568 Msa0727230:intron 40.0%
GTGTGATCCTTACTCGAATT+GGG + chr5_1:29475559-29475578 None:intergenic 40.0%
AGTGTGATCCTTACTCGAAT+TGG + chr5_1:29475560-29475579 None:intergenic 40.0%
GTGACTCATCTACTTCTAGA+AGG + chr5_1:29475793-29475812 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr5_1:29476313-29476332 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr5_1:29476220-29476239 Msa0727230:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr5_1:29476313-29476332 Msa0727230:intron 40.0%
!! TGAAATTTGGACTGACTCGA+AGG + chr5_1:29476446-29476465 None:intergenic 40.0%
CTTTCTCCTCTCAACAACAA+TGG - chr5_1:29476467-29476486 Msa0727230:CDS 40.0%
TGAGAGAATAGATCTCAGGT+GGG + chr5_1:29476512-29476531 None:intergenic 40.0%
TTGAGAGAATAGATCTCAGG+TGG + chr5_1:29476513-29476532 None:intergenic 40.0%
ATCGACTAAGACATCGTTAG+TGG + chr5_1:29476589-29476608 None:intergenic 40.0%
CGATGTCTTAGTCGATCAAA+TGG - chr5_1:29476593-29476612 Msa0727230:CDS 40.0%
TGTCTTAGTCGATCAAATGG+TGG - chr5_1:29476596-29476615 Msa0727230:CDS 40.0%
TTACCAGTAGAGAGAAACGT+TGG + chr5_1:29476684-29476703 None:intergenic 40.0%
!! AAGGAGTATCAGGAACAACA+TGG + chr5_1:29476728-29476747 None:intergenic 40.0%
! GAAGGTTACAGACGAGTTTT+AGG + chr5_1:29476806-29476825 None:intergenic 40.0%
AGCGTAGAAGCCTTCTTTAT+CGG + chr5_1:29476853-29476872 None:intergenic 40.0%
!! CATTGGTAGCTAGGGTTTTA+GGG + chr5_1:29476902-29476921 None:intergenic 40.0%
!! ACATTGGTAGCTAGGGTTTT+AGG + chr5_1:29476903-29476922 None:intergenic 40.0%
GCAAAATGCAGAAAGAAGAG+TGG - chr5_1:29477000-29477019 Msa0727230:CDS 40.0%
AATGCAGAAAGAAGAGTGGA+AGG - chr5_1:29477004-29477023 Msa0727230:CDS 40.0%
AGAAAGAAGAGTGGAAGGAA+AGG - chr5_1:29477009-29477028 Msa0727230:CDS 40.0%
AGACTTCATCAAGACTGAAG+AGG - chr5_1:29477142-29477161 Msa0727230:intron 40.0%
!!! ACGTTTTGAAGGAAGAGAAG+AGG - chr5_1:29477201-29477220 Msa0727230:CDS 40.0%
!! GCAGCAAGACTGATTTTTGT+GGG + chr5_1:29468974-29468993 None:intergenic 40.0%
!! AGCAGCAAGACTGATTTTTG+TGG + chr5_1:29468975-29468994 None:intergenic 40.0%
TCGTTTGAGGAAAGATGTGT+TGG - chr5_1:29469126-29469145 Msa0727230:CDS 40.0%
AATTCCAACACCTTCCTCAA+CGG + chr5_1:29477536-29477555 None:intergenic 40.0%
! GAATTGCCTGAGGTGTTTAT+TGG - chr5_1:29477551-29477570 Msa0727230:CDS 40.0%
TGAGATTATAGGGTCTTTGG+GGG - chr5_1:29477736-29477755 Msa0727230:intron 40.0%
GTAATAACCTTCCCTTTCCA+TGG + chr5_1:29469553-29469572 None:intergenic 40.0%
!! GATGAACACTGATTTCCAGA+AGG - chr5_1:29469657-29469676 Msa0727230:CDS 40.0%
ATATGCGATCAAACACCTTC+TGG + chr5_1:29469675-29469694 None:intergenic 40.0%
!! GAAGGTGTTTGATCGCATAT+TGG - chr5_1:29469675-29469694 Msa0727230:CDS 40.0%
GTTTGATCGCATATTGGATG+TGG - chr5_1:29469681-29469700 Msa0727230:CDS 40.0%
ATATTGGATGTGGCTGTCAA+TGG - chr5_1:29469691-29469710 Msa0727230:CDS 40.0%
TATTGGATGTGGCTGTCAAT+GGG - chr5_1:29469692-29469711 Msa0727230:CDS 40.0%
AGGAGGATCAGATGATTAAG+AGG - chr5_1:29469722-29469741 Msa0727230:CDS 40.0%
! CCTAGTGATTGCTTGGTAAT+CGG + chr5_1:29469803-29469822 None:intergenic 40.0%
! ACTAGGAAGTATAGCGAGAA+AGG - chr5_1:29478202-29478221 Msa0727230:CDS 40.0%
! CTAGGAAGTATAGCGAGAAA+GGG - chr5_1:29478203-29478222 Msa0727230:CDS 40.0%
AAGTATAGCGAGAAAGGGTA+TGG - chr5_1:29478208-29478227 Msa0727230:CDS 40.0%
GAATCTGCTGACATTGTTCT+TGG - chr5_1:29469948-29469967 Msa0727230:CDS 40.0%
! CAACTAGTTTCTGATACTCG+GGG + chr5_1:29470026-29470045 None:intergenic 40.0%
GTATCAGAAACTAGTTGTGC+TGG - chr5_1:29470029-29470048 Msa0727230:intron 40.0%
ATCGACGAAGACATCGTTAG+TGG + chr5_1:29468174-29468193 None:intergenic 45.0%
CGATGTCTTCGTCGATCAAA+TGG - chr5_1:29468178-29468197 Msa0727230:CDS 45.0%
GAAATCGAGACAAGGGTTAC+CGG + chr5_1:29468285-29468304 None:intergenic 45.0%
!! AGTGTTTCAGAAGGAGTGTC+GGG + chr5_1:29468323-29468342 None:intergenic 45.0%
! GAGTGTTTCAGAAGGAGTGT+CGG + chr5_1:29468324-29468343 None:intergenic 45.0%
GAGGTTACAGACGAGTTTGA+GGG + chr5_1:29468390-29468409 None:intergenic 45.0%
GGAAGGAACATTGGAAGCTA+GGG + chr5_1:29468495-29468514 None:intergenic 45.0%
GAAGTAACCAAAGTCAGCGA+GGG + chr5_1:29468516-29468535 None:intergenic 45.0%
TGAAGTAACCAAAGTCAGCG+AGG + chr5_1:29468517-29468536 None:intergenic 45.0%
GAAGACGATAGAGGATCTCA+GGG + chr5_1:29468547-29468566 None:intergenic 45.0%
AGAAGACGATAGAGGATCTC+AGG + chr5_1:29468548-29468567 None:intergenic 45.0%
ATCCTCTATCGTCTTCTCGA+AGG - chr5_1:29468551-29468570 Msa0727230:CDS 45.0%
AACCTTCGAGAAGACGATAG+AGG + chr5_1:29468556-29468575 None:intergenic 45.0%
GCAAAACGCAGAAAGAAGAG+TGG - chr5_1:29468585-29468604 Msa0727230:CDS 45.0%
AAACGCAGAAAGAAGAGTGG+AGG - chr5_1:29468588-29468607 Msa0727230:CDS 45.0%
AACGCAGAAAGAAGAGTGGA+GGG - chr5_1:29468589-29468608 Msa0727230:CDS 45.0%
AGAAAGAAGAGTGGAGGGAA+AGG - chr5_1:29468594-29468613 Msa0727230:CDS 45.0%
!!! TCAGCCCCTTTTTTAAGGAG+AGG - chr5_1:29468650-29468669 Msa0727230:CDS 45.0%
CTACAACAACAAGGACGTCA+AGG - chr5_1:29468709-29468728 Msa0727230:CDS 45.0%
ACGTCAAGGATAACAAAGGG+TGG - chr5_1:29468723-29468742 Msa0727230:CDS 45.0%
CAAGGATAACAAAGGGTGGA+AGG - chr5_1:29468727-29468746 Msa0727230:CDS 45.0%
AGACTCCATCGTGACTAAAG+AGG - chr5_1:29468760-29468779 Msa0727230:CDS 45.0%
CAAAGGAAGAGTCAACGGAA+GGG + chr5_1:29469006-29469025 None:intergenic 45.0%
TCAAAGGAAGAGTCAACGGA+AGG + chr5_1:29469007-29469026 None:intergenic 45.0%
CCGATCAAAGGAAGAGTCAA+CGG + chr5_1:29469011-29469030 None:intergenic 45.0%
!! CCGTTGACTCTTCCTTTGAT+CGG - chr5_1:29469008-29469027 Msa0727230:CDS 45.0%
!! TAACAGCGTTGACCGATCAA+AGG + chr5_1:29469023-29469042 None:intergenic 45.0%
TATGTGAGACCATTGCCAAG+AGG - chr5_1:29469041-29469060 Msa0727230:CDS 45.0%
! AGGAGGCGCATTATGCTTAT+AGG - chr5_1:29469095-29469114 Msa0727230:CDS 45.0%
! GGAGGCGCATTATGCTTATA+GGG - chr5_1:29469096-29469115 Msa0727230:CDS 45.0%
ATAGGGTTCGTGATCGTTTG+AGG - chr5_1:29469113-29469132 Msa0727230:CDS 45.0%
AACTCCAACACCTTCCTCAA+CGG + chr5_1:29469154-29469173 None:intergenic 45.0%
! GAGTTGCCTGAGGTGTTTAT+TGG - chr5_1:29469169-29469188 Msa0727230:CDS 45.0%
!! GGAGAGGTTTGAGAAGTACT+TGG - chr5_1:29469279-29469298 Msa0727230:CDS 45.0%
!! GAGGTTTGAGAAGTACTTGG+AGG - chr5_1:29469282-29469301 Msa0727230:CDS 45.0%
! GAAGTACTTGGAGGATGTGA+AGG - chr5_1:29469291-29469310 Msa0727230:CDS 45.0%
TGCTCAAGAAGGGAAAGATG+AGG - chr5_1:29469428-29469447 Msa0727230:CDS 45.0%
TTGCTGTGTGTGATGTGTCT+GGG - chr5_1:29469458-29469477 Msa0727230:CDS 45.0%
! ATGTGTCTGGGAGTATGCAT+GGG - chr5_1:29469470-29469489 Msa0727230:CDS 45.0%
ATGCTACACACACCTCCATA+GGG + chr5_1:29469498-29469517 None:intergenic 45.0%
AATGCTACACACACCTCCAT+AGG + chr5_1:29469499-29469518 None:intergenic 45.0%
! TATGGAGGTGTGTGTAGCAT+TGG - chr5_1:29469498-29469517 Msa0727230:CDS 45.0%
! ATGGAGGTGTGTGTAGCATT+GGG - chr5_1:29469499-29469518 Msa0727230:CDS 45.0%
! GTTGGTGTCTGAATTGAACG+AGG - chr5_1:29469525-29469544 Msa0727230:CDS 45.0%
CTGAATTGAACGAGGAACCA+TGG - chr5_1:29469533-29469552 Msa0727230:CDS 45.0%
TTGAACGAGGAACCATGGAA+AGG - chr5_1:29469538-29469557 Msa0727230:CDS 45.0%
TGAACGAGGAACCATGGAAA+GGG - chr5_1:29469539-29469558 Msa0727230:CDS 45.0%
CCTCAGCTTCATGTGATTGA+GGG - chr5_1:29469586-29469605 Msa0727230:CDS 45.0%
CTCAGCTTCATGTGATTGAG+GGG - chr5_1:29469587-29469606 Msa0727230:CDS 45.0%
TCAGCTTCATGTGATTGAGG+GGG - chr5_1:29469588-29469607 Msa0727230:CDS 45.0%
!! TTGTGAGGAACATGGATTGG+GGG - chr5_1:29469635-29469654 Msa0727230:CDS 45.0%
TGTCAATGGGAATCTCAAGG+AGG - chr5_1:29469705-29469724 Msa0727230:CDS 45.0%
ATCAAGCGTCTGCAAACTCT+TGG - chr5_1:29469773-29469792 Msa0727230:CDS 45.0%
TCAAGCGTCTGCAAACTCTT+GGG - chr5_1:29469774-29469793 Msa0727230:CDS 45.0%
CCGATTACCAAGCAATCACT+AGG - chr5_1:29469800-29469819 Msa0727230:CDS 45.0%
TTGGAATCTGAGAGACTCGA+AGG - chr5_1:29469870-29469889 Msa0727230:CDS 45.0%
TATAAGCCCTGTAGAAGCCA+TGG - chr5_1:29469984-29470003 Msa0727230:intron 45.0%
CTTCGGTCCATTTATGGAGT+TGG - chr5_1:29471017-29471036 Msa0727230:intron 45.0%
CATCTGTTACCATGGACCAT+AGG + chr5_1:29471057-29471076 None:intergenic 45.0%
!!! CCATGGAACTGGCTTTTTAG+GGG - chr5_1:29471119-29471138 Msa0727230:intron 45.0%
AAGTCTGATAAGGGTCAGAG+AGG - chr5_1:29471155-29471174 Msa0727230:intron 45.0%
GGGTCAGAGAGGACATTAAA+AGG - chr5_1:29471166-29471185 Msa0727230:intron 45.0%
AGACGATAACAGAAGACAGC+AGG + chr5_1:29471427-29471446 None:intergenic 45.0%
TAGTAGTTGGCAAACCATGG+CGG - chr5_1:29471501-29471520 Msa0727230:intron 45.0%
! TTATGATGGCGTGATGGTTC+TGG - chr5_1:29471539-29471558 Msa0727230:intron 45.0%
!! TGATGGTTCTGGCTCGAATA+AGG - chr5_1:29471550-29471569 Msa0727230:intron 45.0%
CTCCGATGTTCTTATTGGTG+GGG - chr5_1:29472112-29472131 Msa0727230:intron 45.0%
TCCGATGTTCTTATTGGTGG+GGG - chr5_1:29472113-29472132 Msa0727230:intron 45.0%
! AATGAGGTGCCACATCGAAA+TGG - chr5_1:29472365-29472384 Msa0727230:intron 45.0%
! ATGAGGTGCCACATCGAAAT+GGG - chr5_1:29472366-29472385 Msa0727230:intron 45.0%
TGGTTTCCCAAGTTAATCCC+TGG - chr5_1:29472532-29472551 Msa0727230:intron 45.0%
!! TGCTGCGAATTTTGACGTTG+CGG - chr5_1:29472950-29472969 Msa0727230:intron 45.0%
!!! GGTTTTAGAGGTCACCGTAA+CGG + chr5_1:29473009-29473028 None:intergenic 45.0%
AGCAAATTGGAAGGGATGAG+GGG + chr5_1:29473203-29473222 None:intergenic 45.0%
CAAGCAAATTGGAAGGGATG+AGG + chr5_1:29473205-29473224 None:intergenic 45.0%
!!! AATTGGTTTTTGGCGGGAAG+CGG - chr5_1:29473268-29473287 Msa0727230:intron 45.0%
CATCAACCCTGGTTGGAAAA+AGG - chr5_1:29473320-29473339 Msa0727230:intron 45.0%
TCAACCCTGGTTGGAAAAAG+GGG - chr5_1:29473322-29473341 Msa0727230:intron 45.0%
! TTCTCCCCTTTTTCCAACCA+GGG + chr5_1:29473329-29473348 None:intergenic 45.0%
! ATTCTCCCCTTTTTCCAACC+AGG + chr5_1:29473330-29473349 None:intergenic 45.0%
AGGGGAGAATTTCTTGGGAA+AGG - chr5_1:29473340-29473359 Msa0727230:intron 45.0%
! GACCTCATGCTTTGTTCAAG+AGG - chr5_1:29473416-29473435 Msa0727230:intron 45.0%
TCCCTCTTGAACAAAGCATG+AGG + chr5_1:29473421-29473440 None:intergenic 45.0%
! CATGCTTTGTTCAAGAGGGA+TGG - chr5_1:29473421-29473440 Msa0727230:intron 45.0%
CAAGAGGGATGGAAATGGTT+TGG - chr5_1:29473432-29473451 Msa0727230:intron 45.0%
GGTTGTTCCCAAGTAACCAA+AGG - chr5_1:29474030-29474049 Msa0727230:intron 45.0%
TTCTGCAGCACATTCTCCTT+TGG + chr5_1:29474049-29474068 None:intergenic 45.0%
!!! CGCGATAAAGGTGTTTTCCA+AGG - chr5_1:29474558-29474577 Msa0727230:intron 45.0%
ACCAATGTTTGCACCACACT+TGG + chr5_1:29474649-29474668 None:intergenic 45.0%
AGTGTGGTGCAAACATTGGT+AGG - chr5_1:29474649-29474668 Msa0727230:intron 45.0%
! TGGATGTGTGGAGAGTTTTG+CGG - chr5_1:29474683-29474702 Msa0727230:intron 45.0%
TGACTCTCCAAAGCAATCAC+CGG + chr5_1:29474778-29474797 None:intergenic 45.0%
AGAGTCAGGATGTGGTTGTT+GGG - chr5_1:29474791-29474810 Msa0727230:intron 45.0%
TTGGAGGGTCTATAGTGGTT+GGG - chr5_1:29474851-29474870 Msa0727230:intron 45.0%
TCTTCCTGATTGCAGAGAGA+TGG - chr5_1:29474928-29474947 Msa0727230:intron 45.0%
! GGAAGTGCAACTTAGCCAAT+CGG + chr5_1:29475050-29475069 None:intergenic 45.0%
CTAAGTTGCACTTCCTTCTC+TGG - chr5_1:29475055-29475074 Msa0727230:intron 45.0%
TGATTTGACGTTGAAGGTGG+AGG - chr5_1:29475118-29475137 Msa0727230:intron 45.0%
GATTTGCGAGAGAAGCAGTT+AGG - chr5_1:29475167-29475186 Msa0727230:intron 45.0%
GATTTGCGAGAGAAGCAGTT+AGG - chr5_1:29475167-29475186 Msa0727230:intron 45.0%
GGCAAAATTTCCCTGAACTC+AGG - chr5_1:29475260-29475279 Msa0727230:intron 45.0%
GCGATTTCAACCTGAGTTCA+GGG + chr5_1:29475273-29475292 None:intergenic 45.0%
GTACTCTCTACTGGTGGAAA+TGG + chr5_1:29475352-29475371 None:intergenic 45.0%
GGTTGGATATGGGGATTTCA+TGG + chr5_1:29475490-29475509 None:intergenic 45.0%
AATCCCCATATCCAACCTCA+AGG - chr5_1:29475493-29475512 Msa0727230:intron 45.0%
CTACCTTGAGGTTGGATATG+GGG + chr5_1:29475499-29475518 None:intergenic 45.0%
GCTACCTTGAGGTTGGATAT+GGG + chr5_1:29475500-29475519 None:intergenic 45.0%
CATATCCAACCTCAAGGTAG+CGG - chr5_1:29475499-29475518 Msa0727230:intron 45.0%
ATATCCAACCTCAAGGTAGC+GGG - chr5_1:29475500-29475519 Msa0727230:intron 45.0%
CAACGGCTACACAATAACAC+TGG - chr5_1:29475705-29475724 Msa0727230:intron 45.0%
TGTGGTGTGGTGCTTATGTA+TGG + chr5_1:29475981-29476000 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr5_1:29476312-29476331 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr5_1:29476312-29476331 Msa0727230:intron 45.0%
!! ATTTGGACTGACTCGAAGGT+GGG + chr5_1:29476442-29476461 None:intergenic 45.0%
!! AATTTGGACTGACTCGAAGG+TGG + chr5_1:29476443-29476462 None:intergenic 45.0%
TGTTAGTGGTGGTAGGGTTA+GGG + chr5_1:29476542-29476561 None:intergenic 45.0%
ATCGTTAGTGGTTGTTGTGG+AGG + chr5_1:29476577-29476596 None:intergenic 45.0%
GACATCGTTAGTGGTTGTTG+TGG + chr5_1:29476580-29476599 None:intergenic 45.0%
GCTTGCCAGAGAATTGAAGT+TGG + chr5_1:29476622-29476641 None:intergenic 45.0%
ATGTTCTCTGTCAACCCCAT+CGG + chr5_1:29476657-29476676 None:intergenic 45.0%
TCACCAACGTTTCTCTCTAC+TGG - chr5_1:29476678-29476697 Msa0727230:intron 45.0%
!! AGTGTCTCAGAAGGAGTATC+AGG + chr5_1:29476738-29476757 None:intergenic 45.0%
TCGAGAGACTCAAACTAGCT+TGG - chr5_1:29476760-29476779 Msa0727230:CDS 45.0%
!! TAGGGTGGTGAGTGGATTTT+GGG + chr5_1:29476787-29476806 None:intergenic 45.0%
!! TTAGGGTGGTGAGTGGATTT+TGG + chr5_1:29476788-29476807 None:intergenic 45.0%
!!! GTTACAGACGAGTTTTAGGG+TGG + chr5_1:29476802-29476821 None:intergenic 45.0%
AAACTCGTCTGTAACCTTCG+TGG - chr5_1:29476807-29476826 Msa0727230:CDS 45.0%
ACCGGTAAGTCCGATAAAGA+AGG - chr5_1:29476840-29476859 Msa0727230:CDS 45.0%
GCCTTCTTTATCGGACTTAC+CGG + chr5_1:29476844-29476863 None:intergenic 45.0%
! GGAAGGAACATTGGTAGCTA+GGG + chr5_1:29476910-29476929 None:intergenic 45.0%
GAAGTAACCAAAGTCAGCGA+GGG + chr5_1:29468516-29468535 None:intergenic 45.0%
TGAAGTAACCAAAGTCAGCG+AGG + chr5_1:29468517-29468536 None:intergenic 45.0%
!! CTTTGGAACCTTCGAGAAGA+CGG + chr5_1:29476977-29476996 None:intergenic 45.0%
GAGTGGAAGGAAAGGAAATC+TGG - chr5_1:29477017-29477036 Msa0727230:CDS 45.0%
CTTCATCAAGACTGAAGAGG+TGG - chr5_1:29477145-29477164 Msa0727230:intron 45.0%
! AGAAGCTGCTCACGTTTTGA+AGG - chr5_1:29477190-29477209 Msa0727230:CDS 45.0%
CAAAGGAAGAGTCAACGGAA+GGG + chr5_1:29469006-29469025 None:intergenic 45.0%
TCAAAGGAAGAGTCAACGGA+AGG + chr5_1:29469007-29469026 None:intergenic 45.0%
CCGATCAAAGGAAGAGTCAA+CGG + chr5_1:29469011-29469030 None:intergenic 45.0%
!! CCGTTGACTCTTCCTTTGAT+CGG - chr5_1:29469008-29469027 Msa0727230:CDS 45.0%
!! TAACAGCGTTGACCGATCAA+AGG + chr5_1:29469023-29469042 None:intergenic 45.0%
TATGTGAGACCATTGCCAAG+AGG - chr5_1:29469041-29469060 Msa0727230:CDS 45.0%
TTCCCTTGGGAGGAATATGA+AGG - chr5_1:29477449-29477468 Msa0727230:intron 45.0%
CACCTTCATATTCCTCCCAA+GGG + chr5_1:29477454-29477473 None:intergenic 45.0%
ACACCTTCATATTCCTCCCA+AGG + chr5_1:29477455-29477474 None:intergenic 45.0%
TTGGGAGGAATATGAAGGTG+TGG - chr5_1:29477454-29477473 Msa0727230:intron 45.0%
! AGGAGGCGCATTATGCTTAT+AGG - chr5_1:29469095-29469114 Msa0727230:CDS 45.0%
! GGAGGCGCATTATGCTTATA+GGG - chr5_1:29469096-29469115 Msa0727230:CDS 45.0%
ATAGGGTTCGTGATCGTTTG+AGG - chr5_1:29469113-29469132 Msa0727230:CDS 45.0%
ACAGAAGCCACCCTATTGTA+AGG + chr5_1:29477599-29477618 None:intergenic 45.0%
!! GGAGAGGTTTGAGAAGTACT+TGG - chr5_1:29469279-29469298 Msa0727230:CDS 45.0%
!! GAGGTTTGAGAAGTACTTGG+AGG - chr5_1:29469282-29469301 Msa0727230:CDS 45.0%
! GAAGTACTTGGAGGATGTGA+AGG - chr5_1:29469291-29469310 Msa0727230:CDS 45.0%
! ATTATAGGGTCTTTGGGGGA+TGG - chr5_1:29477740-29477759 Msa0727230:CDS 45.0%
TTGCAGTGTGTGATGTGTCT+GGG - chr5_1:29477843-29477862 Msa0727230:CDS 45.0%
CCATGGTTCCTCACTCAATT+CGG + chr5_1:29477921-29477940 None:intergenic 45.0%
TTGAGTGAGGAACCATGGAA+AGG - chr5_1:29477923-29477942 Msa0727230:intron 45.0%
TGAGTGAGGAACCATGGAAA+GGG - chr5_1:29477924-29477943 Msa0727230:intron 45.0%
CCTCAGCTTCATGTGATTCA+GGG - chr5_1:29477971-29477990 Msa0727230:CDS 45.0%
CTCAGCTTCATGTGATTCAG+GGG - chr5_1:29477972-29477991 Msa0727230:CDS 45.0%
TCAGCTTCATGTGATTCAGG+GGG - chr5_1:29477973-29477992 Msa0727230:CDS 45.0%
AGTTCGTGAGGGATATGGAT+TGG - chr5_1:29478017-29478036 Msa0727230:CDS 45.0%
GTTCGTGAGGGATATGGATT+GGG - chr5_1:29478018-29478037 Msa0727230:CDS 45.0%
! TTCGTGAGGGATATGGATTG+GGG - chr5_1:29478019-29478038 Msa0727230:CDS 45.0%
TGTCAATGGGAATCTCAAGG+AGG - chr5_1:29469705-29469724 Msa0727230:CDS 45.0%
GATCTTCGTGTTCAGTGACA+TGG - chr5_1:29478129-29478148 Msa0727230:CDS 45.0%
ATCAAGCGTCTGCAAACTCT+TGG - chr5_1:29469773-29469792 Msa0727230:CDS 45.0%
TCAAGCGTCTGCAAACTCTT+GGG - chr5_1:29469774-29469793 Msa0727230:CDS 45.0%
CCGATTACCAAGCAATCACT+AGG - chr5_1:29469800-29469819 Msa0727230:CDS 45.0%
! CTGTGCCTCAGATAGTCTTT+TGG - chr5_1:29478236-29478255 Msa0727230:CDS 45.0%
TTGGAATCTGAGAGACTCGA+AGG - chr5_1:29469870-29469889 Msa0727230:CDS 45.0%
TATAAGCCCTGTAGAAGCCA+TGG - chr5_1:29469984-29470003 Msa0727230:intron 45.0%
GGTTTGAGTGGTGGTTTGAG+CGG + chr5_1:29468144-29468163 None:intergenic 50.0%
GAAGACATCGTTAGTGGTGG+TGG + chr5_1:29468168-29468187 None:intergenic 50.0%
GACGAAGACATCGTTAGTGG+TGG + chr5_1:29468171-29468190 None:intergenic 50.0%
TTTCAGTCAACCCCATCGGT+GGG + chr5_1:29468238-29468257 None:intergenic 50.0%
! TTTTCAGTCAACCCCATCGG+TGG + chr5_1:29468239-29468258 None:intergenic 50.0%
TCACCAACGTTTCTCTCCAC+CGG - chr5_1:29468263-29468282 Msa0727230:CDS 50.0%
TTACCGGTGGAGAGAAACGT+TGG + chr5_1:29468269-29468288 None:intergenic 50.0%
!! AAGGAGTGTCGGGAACAACA+TGG + chr5_1:29468313-29468332 None:intergenic 50.0%
CTCTCGACGAGTGTTTCAGA+AGG + chr5_1:29468332-29468351 None:intergenic 50.0%
!! CTTCTGAAACACTCGTCGAG+AGG - chr5_1:29468330-29468349 Msa0727230:CDS 50.0%
TCGAGAGGCTCAAACTAGCT+TGG - chr5_1:29468345-29468364 Msa0727230:CDS 50.0%
GGAGGTTACAGACGAGTTTG+AGG + chr5_1:29468391-29468410 None:intergenic 50.0%
AAACTCGTCTGTAACCTCCG+TGG - chr5_1:29468392-29468411 Msa0727230:CDS 50.0%
ACCGGCAAGTCCAACAAAGA+AGG - chr5_1:29468425-29468444 Msa0727230:CDS 50.0%
GCCTTCTTTGTTGGACTTGC+CGG + chr5_1:29468429-29468448 None:intergenic 50.0%
GGGAAGGAACATTGGAAGCT+AGG + chr5_1:29468496-29468515 None:intergenic 50.0%
TAACCAAAGTCAGCGAGGGA+AGG + chr5_1:29468512-29468531 None:intergenic 50.0%
GAGTGGAGGGAAAGGAAATC+TGG - chr5_1:29468602-29468621 Msa0727230:CDS 50.0%
CTCCATCGTGACTAAAGAGG+TGG - chr5_1:29468763-29468782 Msa0727230:CDS 50.0%
TGCCACCTCTTTAGTCACGA+TGG + chr5_1:29468768-29468787 None:intergenic 50.0%
AGCGAGAGTTAAGGCTCAGA+AGG - chr5_1:29468787-29468806 Msa0727230:CDS 50.0%
GGAAGCTGCTCATGCTTTGA+AGG - chr5_1:29468808-29468827 Msa0727230:CDS 50.0%
GGAAGAGAAGAGGATTGCCT+TGG - chr5_1:29468829-29468848 Msa0727230:CDS 50.0%
AGGGAAGATCCTCTTGGCAA+TGG + chr5_1:29469053-29469072 None:intergenic 50.0%
TTGCCAAGAGGATCTTCCCT+CGG - chr5_1:29469053-29469072 Msa0727230:CDS 50.0%
TTCCCTCGGGAGGAATATGA+AGG - chr5_1:29469067-29469086 Msa0727230:CDS 50.0%
CACCTTCATATTCCTCCCGA+GGG + chr5_1:29469072-29469091 None:intergenic 50.0%
ACACCTTCATATTCCTCCCG+AGG + chr5_1:29469073-29469092 None:intergenic 50.0%
TCGGGAGGAATATGAAGGTG+TGG - chr5_1:29469072-29469091 Msa0727230:CDS 50.0%
! GGAGGAATATGAAGGTGTGG+AGG - chr5_1:29469075-29469094 Msa0727230:CDS 50.0%
! GGAATATGAAGGTGTGGAGG+AGG - chr5_1:29469078-29469097 Msa0727230:CDS 50.0%
!! AAGATGTGTTGGTGCCGTTG+AGG - chr5_1:29469137-29469156 Msa0727230:CDS 50.0%
TACTTGGAGGATGTGAAGGC+AGG - chr5_1:29469295-29469314 Msa0727230:CDS 50.0%
ACTTGGAGGATGTGAAGGCA+GGG - chr5_1:29469296-29469315 Msa0727230:CDS 50.0%
GGGAAGACTACTATTGCTGC+TGG - chr5_1:29469316-29469335 Msa0727230:CDS 50.0%
! GAGTCTTTGCGTGATGGAGA+TGG - chr5_1:29469364-29469383 Msa0727230:CDS 50.0%
! CTTGCTGTGTGTGATGTGTC+TGG - chr5_1:29469457-29469476 Msa0727230:CDS 50.0%
! GATGTGTCTGGGAGTATGCA+TGG - chr5_1:29469469-29469488 Msa0727230:CDS 50.0%
TGCTACACACACCTCCATAG+GGG + chr5_1:29469497-29469516 None:intergenic 50.0%
! TGGAGGTGTGTGTAGCATTG+GGG - chr5_1:29469500-29469519 Msa0727230:CDS 50.0%
! GTGTGTAGCATTGGGGTTGT+TGG - chr5_1:29469507-29469526 Msa0727230:CDS 50.0%
GCCTCAGCTTCATGTGATTG+AGG - chr5_1:29469585-29469604 Msa0727230:CDS 50.0%
CCCTCAATCACATGAAGCTG+AGG + chr5_1:29469589-29469608 None:intergenic 50.0%
GGCTGTCAATGGGAATCTCA+AGG - chr5_1:29469702-29469721 Msa0727230:CDS 50.0%
!! AAAGGAGTGGCACTGGTAAG+TGG - chr5_1:29469916-29469935 Msa0727230:CDS 50.0%
CAGCTTCCATGGCTTCTACA+GGG + chr5_1:29469993-29470012 None:intergenic 50.0%
GTCGGAAAATAGCATGCACC+AGG - chr5_1:29471093-29471112 Msa0727230:intron 50.0%
TAGCATGCACCAGGATACCA+TGG - chr5_1:29471102-29471121 Msa0727230:intron 50.0%
AAGCCAGTTCCATGGTATCC+TGG + chr5_1:29471114-29471133 None:intergenic 50.0%
CCCCTAAAAAGCCAGTTCCA+TGG + chr5_1:29471122-29471141 None:intergenic 50.0%
CTAATTGCCAAAGTCCGCCA+TGG + chr5_1:29471518-29471537 None:intergenic 50.0%
!! TGGTTCTGGCTCGAATAAGG+AGG - chr5_1:29471553-29471572 Msa0727230:intron 50.0%
!! GTAAGGGCTGGCTATTTCAC+TGG - chr5_1:29471769-29471788 Msa0727230:intron 50.0%
CCCCCCACCAATAAGAACAT+CGG + chr5_1:29472117-29472136 None:intergenic 50.0%
CCGATGTTCTTATTGGTGGG+GGG - chr5_1:29472114-29472133 Msa0727230:intron 50.0%
ATGTTCTTATTGGTGGGGGG+AGG - chr5_1:29472117-29472136 Msa0727230:intron 50.0%
GACGTTGCGGCAAAGTATAG+CGG - chr5_1:29472963-29472982 Msa0727230:intron 50.0%
AAGTATAGCGGCCACAGTTG+CGG - chr5_1:29472975-29472994 Msa0727230:intron 50.0%
CGGTATTGTAACCGCAACTG+TGG + chr5_1:29472989-29473008 None:intergenic 50.0%
GCTTGTGAAGAAGCCAAGTG+TGG - chr5_1:29474633-29474652 Msa0727230:intron 50.0%
GCCAAGTGTGGTGCAAACAT+TGG - chr5_1:29474645-29474664 Msa0727230:intron 50.0%
TACGATTGCGTGTCTGGTGA+TGG - chr5_1:29474719-29474738 Msa0727230:intron 50.0%
GTGGAGAGGATAGTGTGTGA+TGG - chr5_1:29474741-29474760 Msa0727230:intron 50.0%
GAGAGGATAGTGTGTGATGG+AGG - chr5_1:29474744-29474763 Msa0727230:intron 50.0%
GACTCTCCAAAGCAATCACC+GGG + chr5_1:29474777-29474796 None:intergenic 50.0%
!! GGTGATTGCTTTGGAGAGTC+AGG - chr5_1:29474777-29474796 Msa0727230:intron 50.0%
!! TGCTTTGGAGAGTCAGGATG+TGG - chr5_1:29474783-29474802 Msa0727230:intron 50.0%
GAGAGTCAGGATGTGGTTGT+TGG - chr5_1:29474790-29474809 Msa0727230:intron 50.0%
GAGTCAGGATGTGGTTGTTG+GGG - chr5_1:29474792-29474811 Msa0727230:intron 50.0%
! TCGTTTGGTGGTTGGGAGTT+GGG - chr5_1:29474825-29474844 Msa0727230:intron 50.0%
GTTGGAGGGTCTATAGTGGT+TGG - chr5_1:29474850-29474869 Msa0727230:intron 50.0%
AGGGTCTATAGTGGTTGGGA+TGG - chr5_1:29474855-29474874 Msa0727230:intron 50.0%
GTCTATAGTGGTTGGGATGG+TGG - chr5_1:29474858-29474877 Msa0727230:intron 50.0%
! TATAGTGGTTGGGATGGTGG+AGG - chr5_1:29474861-29474880 Msa0727230:intron 50.0%
!! ATAGTGGTTGGGATGGTGGA+GGG - chr5_1:29474862-29474881 Msa0727230:intron 50.0%
TCCTGATTGCAGAGAGATGG+CGG - chr5_1:29474931-29474950 Msa0727230:intron 50.0%
! TCAGTGGAGTGCTTTCCGAT+TGG - chr5_1:29475032-29475051 Msa0727230:intron 50.0%
! ACTTCCTTCTCTGGCGTTGA+AGG - chr5_1:29475064-29475083 Msa0727230:intron 50.0%
! CTTCCTTCTCTGGCGTTGAA+GGG - chr5_1:29475065-29475084 Msa0727230:intron 50.0%
GCGAGAGAAGCAGTTAGGAA+TGG - chr5_1:29475172-29475191 Msa0727230:intron 50.0%
GCGAGAGAAGCAGTTAGGAA+TGG - chr5_1:29475172-29475191 Msa0727230:intron 50.0%
! GTTCAGGGAAATTTTGCCGG+TGG + chr5_1:29475258-29475277 None:intergenic 50.0%
GGCGATTTCAACCTGAGTTC+AGG + chr5_1:29475274-29475293 None:intergenic 50.0%
CTCTCTACTGGTGGAAATGG+TGG + chr5_1:29475349-29475368 None:intergenic 50.0%
AAGGTCGTACTCTCTACTGG+TGG + chr5_1:29475358-29475377 None:intergenic 50.0%
TGCAAGGTCGTACTCTCTAC+TGG + chr5_1:29475361-29475380 None:intergenic 50.0%
! GTAGCAGCGAGTGTTTTGCA+AGG + chr5_1:29475377-29475396 None:intergenic 50.0%
TGCAAAACACTCGCTGCTAC+TGG - chr5_1:29475377-29475396 Msa0727230:intron 50.0%
AGACTCCGTTCACCTTGAGA+TGG - chr5_1:29475417-29475436 Msa0727230:intron 50.0%
GAGGACCATCTCAAGGTGAA+CGG + chr5_1:29475425-29475444 None:intergenic 50.0%
TTGCATCGAGGACCATCTCA+AGG + chr5_1:29475432-29475451 None:intergenic 50.0%
CGCTACCTTGAGGTTGGATA+TGG + chr5_1:29475501-29475520 None:intergenic 50.0%
TTCTCATTCCCGCTACCTTG+AGG + chr5_1:29475511-29475530 None:intergenic 50.0%
!! TTTGGACTGACTCGAAGGTG+GGG + chr5_1:29476441-29476460 None:intergenic 50.0%
GTGTTAGTGGTGGTAGGGTT+AGG + chr5_1:29476543-29476562 None:intergenic 50.0%
GGTTGTTGTGGAGGTTTGAG+CGG + chr5_1:29476568-29476587 None:intergenic 50.0%
GGTGGCCAACTTCAATTCTC+TGG - chr5_1:29476614-29476633 Msa0727230:CDS 50.0%
AAGCAACCAAAACCCACCGA+TGG - chr5_1:29476638-29476657 Msa0727230:CDS 50.0%
AGCAACCAAAACCCACCGAT+GGG - chr5_1:29476639-29476658 Msa0727230:CDS 50.0%
!!! ACGAGTTTTAGGGTGGTGAG+TGG + chr5_1:29476795-29476814 None:intergenic 50.0%
TGTAACCTTCGTGGTGTTCG+TGG - chr5_1:29476816-29476835 Msa0727230:CDS 50.0%
! GGGAAGGAACATTGGTAGCT+AGG + chr5_1:29476911-29476930 None:intergenic 50.0%
TAACCAAAGTCAGCGAGGGA+AGG + chr5_1:29468512-29468531 None:intergenic 50.0%
GAAGACGGTAGAGGATCTCA+GGG + chr5_1:29476962-29476981 None:intergenic 50.0%
AGAAGACGGTAGAGGATCTC+AGG + chr5_1:29476963-29476982 None:intergenic 50.0%
ATCCTCTACCGTCTTCTCGA+AGG - chr5_1:29476966-29476985 Msa0727230:CDS 50.0%
AACCTTCGAGAAGACGGTAG+AGG + chr5_1:29476971-29476990 None:intergenic 50.0%
AGGGAAGATCCTCTTGGCAA+TGG + chr5_1:29469053-29469072 None:intergenic 50.0%
TTGCCAAGAGGATCTTCCCT+TGG - chr5_1:29469053-29469072 Msa0727230:CDS 50.0%
TGCCAAGAGGATCTTCCCTT+GGG - chr5_1:29477436-29477455 Msa0727230:intron 50.0%
! GGAGGAATATGAAGGTGTGG+AGG - chr5_1:29469075-29469094 Msa0727230:CDS 50.0%
! GGAATATGAAGGTGTGGAGG+AGG - chr5_1:29469078-29469097 Msa0727230:CDS 50.0%
!! AAGATGTGTTGGTGCCGTTG+AGG - chr5_1:29469137-29469156 Msa0727230:CDS 50.0%
!! GAAGGTGTTGGAATTGCCTG+AGG - chr5_1:29477541-29477560 Msa0727230:CDS 50.0%
TACTTGGAGGATGTGAAGGC+AGG - chr5_1:29469295-29469314 Msa0727230:CDS 50.0%
ACTTGGAGGATGTGAAGGCA+GGG - chr5_1:29469296-29469315 Msa0727230:CDS 50.0%
GGGAAGACTACTATTGCTGC+TGG - chr5_1:29469316-29469335 Msa0727230:CDS 50.0%
CTTGCAGTGTGTGATGTGTC+TGG - chr5_1:29477842-29477861 Msa0727230:CDS 50.0%
! ATGTGTCTGGGAGCATGTCT+GGG - chr5_1:29477855-29477874 Msa0727230:CDS 50.0%
AATGCCACAGACACCTCCAT+AGG + chr5_1:29477884-29477903 None:intergenic 50.0%
!! TATGGAGGTGTCTGTGGCAT+TGG - chr5_1:29477883-29477902 Msa0727230:CDS 50.0%
!! ATGGAGGTGTCTGTGGCATT+GGG - chr5_1:29477884-29477903 Msa0727230:CDS 50.0%
! GTTGGTGTCCGAATTGAGTG+AGG - chr5_1:29477910-29477929 Msa0727230:CDS 50.0%
CCGAATTGAGTGAGGAACCA+TGG - chr5_1:29477918-29477937 Msa0727230:intron 50.0%
TGAGGAACCATGGAAAGGGA+AGG - chr5_1:29477928-29477947 Msa0727230:intron 50.0%
GCCTCAGCTTCATGTGATTC+AGG - chr5_1:29477970-29477989 Msa0727230:CDS 50.0%
CCCTGAATCACATGAAGCTG+AGG + chr5_1:29477974-29477993 None:intergenic 50.0%
AGTCCAAGACACAGTTCGTG+AGG - chr5_1:29478005-29478024 Msa0727230:CDS 50.0%
GTCCAAGACACAGTTCGTGA+GGG - chr5_1:29478006-29478025 Msa0727230:CDS 50.0%
ATCCCTCACGAACTGTGTCT+TGG + chr5_1:29478011-29478030 None:intergenic 50.0%
GACACAGTTCGTGAGGGATA+TGG - chr5_1:29478012-29478031 Msa0727230:CDS 50.0%
!! TCGTGAGGGATATGGATTGG+GGG - chr5_1:29478020-29478039 Msa0727230:CDS 50.0%
GGCTGTCAATGGGAATCTCA+AGG - chr5_1:29469702-29469721 Msa0727230:CDS 50.0%
CAGCTTCCATGGCTTCTACA+GGG + chr5_1:29469993-29470012 None:intergenic 50.0%
!! TGGTGGTGGTGGTAGGGTTA+GGG + chr5_1:29468121-29468140 None:intergenic 55.0%
TTGAGTGGTGGTTTGAGCGG+TGG + chr5_1:29468141-29468160 None:intergenic 55.0%
!! AGTGGTGGTGGTGGTTTGAG+TGG + chr5_1:29468156-29468175 None:intergenic 55.0%
!! GACATCGTTAGTGGTGGTGG+TGG + chr5_1:29468165-29468184 None:intergenic 55.0%
! ATCGGTGGGTTTCGGTTCCT+TGG + chr5_1:29468224-29468243 None:intergenic 55.0%
AAGGAACCGAAACCCACCGA+TGG - chr5_1:29468223-29468242 Msa0727230:CDS 55.0%
AGGAACCGAAACCCACCGAT+GGG - chr5_1:29468224-29468243 Msa0727230:CDS 55.0%
! TCAACCCCATCGGTGGGTTT+CGG + chr5_1:29468232-29468251 None:intergenic 55.0%
ATCGAGACAAGGGTTACCGG+TGG + chr5_1:29468282-29468301 None:intergenic 55.0%
! GAGGGCAGTGAGAGGGTTTT+GGG + chr5_1:29468372-29468391 None:intergenic 55.0%
! TGAGGGCAGTGAGAGGGTTT+TGG + chr5_1:29468373-29468392 None:intergenic 55.0%
CGAGTTTGAGGGCAGTGAGA+GGG + chr5_1:29468379-29468398 None:intergenic 55.0%
ACGAGTTTGAGGGCAGTGAG+AGG + chr5_1:29468380-29468399 None:intergenic 55.0%
TGTAACCTCCGTGGTGTTCG+TGG - chr5_1:29468401-29468420 Msa0727230:CDS 55.0%
GCTTCTATGCTGCCGCTCTA+TGG - chr5_1:29468447-29468466 Msa0727230:CDS 55.0%
GTCAGCGAGGGAAGGAACAT+TGG + chr5_1:29468504-29468523 None:intergenic 55.0%
!! GTTCCTTCCCTCGCTGACTT+TGG - chr5_1:29468506-29468525 Msa0727230:CDS 55.0%
AGAGGTGGCAGCGAGAGTTA+AGG - chr5_1:29468778-29468797 Msa0727230:CDS 55.0%
TGCCAAGAGGATCTTCCCTC+GGG - chr5_1:29469054-29469073 Msa0727230:CDS 55.0%
!! TGTGTTGGTGCCGTTGAGGA+AGG - chr5_1:29469141-29469160 Msa0727230:CDS 55.0%
!! GAAGGTGTTGGAGTTGCCTG+AGG - chr5_1:29469159-29469178 Msa0727230:CDS 55.0%
! GCGTGATGGAGATGGTGAAG+TGG - chr5_1:29469372-29469391 Msa0727230:CDS 55.0%
GTGAAGTGGCTGAGTTGCAG+TGG - chr5_1:29469386-29469405 Msa0727230:CDS 55.0%
GAGTATGCATGGGACCCCTA+TGG - chr5_1:29469480-29469499 Msa0727230:CDS 55.0%
TATGCATGGGACCCCTATGG+AGG - chr5_1:29469483-29469502 Msa0727230:CDS 55.0%
CGAGGAACCATGGAAAGGGA+AGG - chr5_1:29469543-29469562 Msa0727230:CDS 55.0%
TTTCTGAGTGGATGGCACCG+GGG + chr5_1:29469899-29469918 None:intergenic 55.0%
CTTTCTGAGTGGATGGCACC+GGG + chr5_1:29469900-29469919 None:intergenic 55.0%
CCTTTCTGAGTGGATGGCAC+CGG + chr5_1:29469901-29469920 None:intergenic 55.0%
GCCATCCACTCAGAAAGGAG+TGG - chr5_1:29469903-29469922 Msa0727230:CDS 55.0%
GCCACTCCTTTCTGAGTGGA+TGG + chr5_1:29469907-29469926 None:intergenic 55.0%
! CAGTGCCACTCCTTTCTGAG+TGG + chr5_1:29469911-29469930 None:intergenic 55.0%
CACTCAGAAAGGAGTGGCAC+TGG - chr5_1:29469909-29469928 Msa0727230:CDS 55.0%
GCAGCTTCCATGGCTTCTAC+AGG + chr5_1:29469994-29470013 None:intergenic 55.0%
GCACCAGGATACCATGGAAC+TGG - chr5_1:29471108-29471127 Msa0727230:intron 55.0%
!! TGGCAAACCATGGCGGACTT+TGG - chr5_1:29471508-29471527 Msa0727230:intron 55.0%
GGAAGGGATGAGGGGAATAG+TGG + chr5_1:29473195-29473214 None:intergenic 55.0%
ATGGAGCAGCTCCTGGTTGT+TGG + chr5_1:29473369-29473388 None:intergenic 55.0%
AGATCAGATGGAGCAGCTCC+TGG + chr5_1:29473376-29473395 None:intergenic 55.0%
TTCAAGGGGAAGACTTGCGG+AGG - chr5_1:29474477-29474496 Msa0727230:intron 55.0%
TGCTGCTACGATTGCGTGTC+TGG - chr5_1:29474713-29474732 Msa0727230:intron 55.0%
!! GATTGCGTGTCTGGTGATGG+TGG - chr5_1:29474722-29474741 Msa0727230:intron 55.0%
AAGTCGCCCGGTGATTGCTT+TGG - chr5_1:29474768-29474787 Msa0727230:intron 55.0%
! TGGAGGGTCGTTTGGTGGTT+GGG - chr5_1:29474818-29474837 Msa0727230:intron 55.0%
! GTCGTTTGGTGGTTGGGAGT+TGG - chr5_1:29474824-29474843 Msa0727230:intron 55.0%
TTGGGAGTTGGGACGTTGGA+GGG - chr5_1:29474836-29474855 Msa0727230:intron 55.0%
GGACGTTGGAGGGTCTATAG+TGG - chr5_1:29474846-29474865 Msa0727230:intron 55.0%
!! TGGGATGGTGGAGGGTAATC+AGG - chr5_1:29474870-29474889 Msa0727230:intron 55.0%
ACTCCCTTCAACGCCAGAGA+AGG + chr5_1:29475071-29475090 None:intergenic 55.0%
CATTCCCGCTACCTTGAGGT+TGG + chr5_1:29475507-29475526 None:intergenic 55.0%
! CTGACTCGAAGGTGGGGTAA+AGG + chr5_1:29476435-29476454 None:intergenic 55.0%
! CGGTGGTGTTAGTGGTGGTA+GGG + chr5_1:29476548-29476567 None:intergenic 55.0%
! TTGAGCGGTGGTGTTAGTGG+TGG + chr5_1:29476553-29476572 None:intergenic 55.0%
! GGTTTGAGCGGTGGTGTTAG+TGG + chr5_1:29476556-29476575 None:intergenic 55.0%
TGTTGTGGAGGTTTGAGCGG+TGG + chr5_1:29476565-29476584 None:intergenic 55.0%
GCAACCAAAACCCACCGATG+GGG - chr5_1:29476640-29476659 Msa0727230:CDS 55.0%
!! TCAACCCCATCGGTGGGTTT+TGG + chr5_1:29468232-29468251 None:intergenic 55.0%
TCTCTGTCAACCCCATCGGT+GGG + chr5_1:29476653-29476672 None:intergenic 55.0%
TTCTCTGTCAACCCCATCGG+TGG + chr5_1:29476654-29476673 None:intergenic 55.0%
CTCTCGACGAGTGTCTCAGA+AGG + chr5_1:29476747-29476766 None:intergenic 55.0%
CTTCGTGGTGTTCGTGGTAC+CGG - chr5_1:29476822-29476841 Msa0727230:CDS 55.0%
GTCAGCGAGGGAAGGAACAT+TGG + chr5_1:29468504-29468523 None:intergenic 55.0%
!! GTTCCTTCCCTCGCTGACTT+TGG - chr5_1:29468506-29468525 Msa0727230:CDS 55.0%
AGAGGTGGCAGCGAGAGATA+AGG - chr5_1:29477160-29477179 Msa0727230:intron 55.0%
CTCCCAAGGGAAGATCCTCT+TGG + chr5_1:29477441-29477460 None:intergenic 55.0%
CAAGAGGATCTTCCCTTGGG+AGG - chr5_1:29477439-29477458 Msa0727230:intron 55.0%
!! TGTGTTGGTGCCGTTGAGGA+AGG - chr5_1:29469141-29469160 Msa0727230:CDS 55.0%
! TCTTTGGGGGATGGAGATGG+TGG - chr5_1:29477749-29477768 Msa0727230:CDS 55.0%
!! GGATGGAGATGGTGGAGAAG+TGG - chr5_1:29477757-29477776 Msa0727230:CDS 55.0%
GAGAAGTGGCTGAGTTGCAG+TGG - chr5_1:29477771-29477790 Msa0727230:CDS 55.0%
! GATGTGTCTGGGAGCATGTC+TGG - chr5_1:29477854-29477873 Msa0727230:CDS 55.0%
! GAGCATGTCTGGGACTCCTA+TGG - chr5_1:29477865-29477884 Msa0727230:CDS 55.0%
! CATGTCTGGGACTCCTATGG+AGG - chr5_1:29477868-29477887 Msa0727230:CDS 55.0%
!! GACTCCTATGGAGGTGTCTG+TGG - chr5_1:29477877-29477896 Msa0727230:CDS 55.0%
!! TGGAGGTGTCTGTGGCATTG+GGG - chr5_1:29477885-29477904 Msa0727230:CDS 55.0%
! GTCTGTGGCATTGGGGTTGT+TGG - chr5_1:29477892-29477911 Msa0727230:CDS 55.0%
TTTCTGAGTGGATGGCACCG+GGG + chr5_1:29469899-29469918 None:intergenic 55.0%
CTTTCTGAGTGGATGGCACC+GGG + chr5_1:29469900-29469919 None:intergenic 55.0%
CCTTTCTGAGTGGATGGCAC+CGG + chr5_1:29469901-29469920 None:intergenic 55.0%
GCCATCCACTCAGAAAGGAG+TGG - chr5_1:29469903-29469922 Msa0727230:CDS 55.0%
GCCACTCCTTTCTGAGTGGA+TGG + chr5_1:29469907-29469926 None:intergenic 55.0%
!! AAAGGAGTGGCGCTGGTAAG+TGG - chr5_1:29478301-29478320 Msa0727230:CDS 55.0%
!! AAGGAGTGGCGCTGGTAAGT+GGG - chr5_1:29478302-29478321 Msa0727230:CDS 55.0%
GCAGCTTCCATGGCTTCTAC+AGG + chr5_1:29469994-29470013 None:intergenic 55.0%
ATGGCCTCCGTCACTCTCGT+TGG - chr5_1:29468065-29468084 Msa0727230:CDS 60.0%
AGGTGGGCCAACGAGAGTGA+CGG + chr5_1:29468075-29468094 None:intergenic 60.0%
!! GTGGTGGTGGTGGTAGGGTT+AGG + chr5_1:29468122-29468141 None:intergenic 60.0%
AGTGGTGGTTTGAGCGGTGG+TGG + chr5_1:29468138-29468157 None:intergenic 60.0%
!! GGTGGTGGTGGTTTGAGTGG+TGG + chr5_1:29468153-29468172 None:intergenic 60.0%
GGAACCGAAACCCACCGATG+GGG - chr5_1:29468225-29468244 Msa0727230:CDS 60.0%
CTCCGTGGTGTTCGTGGTAC+CGG - chr5_1:29468407-29468426 Msa0727230:CDS 60.0%
TGCCGGTACCACGAACACCA+CGG + chr5_1:29468412-29468431 None:intergenic 60.0%
CTCCCGAGGGAAGATCCTCT+TGG + chr5_1:29469059-29469078 None:intergenic 60.0%
CAAGAGGATCTTCCCTCGGG+AGG - chr5_1:29469057-29469076 Msa0727230:CDS 60.0%
!! GGTGCCGTTGAGGAAGGTGT+TGG - chr5_1:29469147-29469166 Msa0727230:CDS 60.0%
!! CCGGTGCCATCCACTCAGAA+AGG - chr5_1:29469898-29469917 Msa0727230:CDS 60.0%
!! CGTGTCTGGTGATGGTGGAG+AGG - chr5_1:29474727-29474746 Msa0727230:intron 60.0%
! TGTGATGGAGGCAAGTCGCC+CGG - chr5_1:29474756-29474775 Msa0727230:intron 60.0%
GGATGTGGTTGTTGGGGCAG+TGG - chr5_1:29474798-29474817 Msa0727230:intron 60.0%
TGTGGTTGTTGGGGCAGTGG+AGG - chr5_1:29474801-29474820 Msa0727230:intron 60.0%
GTGGTTGTTGGGGCAGTGGA+GGG - chr5_1:29474802-29474821 Msa0727230:intron 60.0%
! GTGGAGGGTCGTTTGGTGGT+TGG - chr5_1:29474817-29474836 Msa0727230:intron 60.0%
GTGGTTGGGAGTTGGGACGT+TGG - chr5_1:29474832-29474851 Msa0727230:intron 60.0%
GTTGGGAGTTGGGACGTTGG+AGG - chr5_1:29474835-29474854 Msa0727230:intron 60.0%
GCCGCCATCTCTCTGCAATC+AGG + chr5_1:29474935-29474954 None:intergenic 60.0%
! ATTGCAGAGAGATGGCGGCG+AGG - chr5_1:29474936-29474955 Msa0727230:intron 60.0%
! TTGCAGAGAGATGGCGGCGA+GGG - chr5_1:29474937-29474956 Msa0727230:intron 60.0%
GGTGGAGGACACAGTTGCGT+TGG - chr5_1:29475133-29475152 Msa0727230:intron 60.0%
! CGGCGGCCATTGTTGTTGAG+AGG + chr5_1:29476476-29476495 None:intergenic 60.0%
AGGTGGGCCAACGAGAGTGA+CGG + chr5_1:29468075-29468094 None:intergenic 60.0%
! GCGGTGGTGTTAGTGGTGGT+AGG + chr5_1:29476549-29476568 None:intergenic 60.0%
CGGTACCACGAACACCACGA+AGG + chr5_1:29476824-29476843 None:intergenic 60.0%
GCTTCTACGCTGCCGCTCTA+TGG - chr5_1:29476862-29476881 Msa0727230:CDS 60.0%
!! GGTGCCGTTGAGGAAGGTGT+TGG - chr5_1:29469147-29469166 Msa0727230:CDS 60.0%
! GGGTCTTTGGGGGATGGAGA+TGG - chr5_1:29477746-29477765 Msa0727230:CDS 60.0%
!! CCGGTGCCATCCACTCAGAA+AGG - chr5_1:29469898-29469917 Msa0727230:CDS 60.0%
CAGCGCCACTCCTTTCTGAG+TGG + chr5_1:29478296-29478315 None:intergenic 60.0%
CACTCAGAAAGGAGTGGCGC+TGG - chr5_1:29478294-29478313 Msa0727230:CDS 60.0%
TGGGCCAACGAGAGTGACGG+AGG + chr5_1:29468072-29468091 None:intergenic 65.0%
!! GAGCGGTGGTGGTGGTGGTA+GGG + chr5_1:29468127-29468146 None:intergenic 65.0%
!! TGAGCGGTGGTGGTGGTGGT+AGG + chr5_1:29468128-29468147 None:intergenic 65.0%
!! GGTTTGAGCGGTGGTGGTGG+TGG + chr5_1:29468132-29468151 None:intergenic 65.0%
! GGTGGTTTGAGCGGTGGTGG+TGG + chr5_1:29468135-29468154 None:intergenic 65.0%
CGGTACCACGAACACCACGG+AGG + chr5_1:29468409-29468428 None:intergenic 65.0%
GAGAGACTCGAAGGCCACCC+CGG - chr5_1:29469879-29469898 Msa0727230:CDS 65.0%
GCCATGGAAGCTGCCATCGC+TGG - chr5_1:29470000-29470019 Msa0727230:intron 65.0%
GCCAGCGATGGCAGCTTCCA+TGG + chr5_1:29470004-29470023 None:intergenic 65.0%
CTGATACTCGGGGCCAGCGA+TGG + chr5_1:29470016-29470035 None:intergenic 65.0%
TGGGGCAGTGGAGGGTCGTT+TGG - chr5_1:29474810-29474829 Msa0727230:intron 65.0%
GGCAGTGGAGGGTCGTTTGG+TGG - chr5_1:29474813-29474832 Msa0727230:intron 65.0%
TTCCATCGTGGCGGCGATGG+TGG - chr5_1:29474960-29474979 Msa0727230:intron 65.0%
TCCATCGTGGCGGCGATGGT+GGG - chr5_1:29474961-29474980 Msa0727230:intron 65.0%
!! GGCGATGGTGGGCAGAGAGA+TGG - chr5_1:29474972-29474991 Msa0727230:intron 65.0%
ATGGCCGCCGTCACTCTCGT+TGG - chr5_1:29476486-29476505 Msa0727230:CDS 65.0%
TGGGCCAACGAGAGTGACGG+CGG + chr5_1:29468072-29468091 None:intergenic 65.0%
GAGAGACTCGAAGGCCACCC+CGG - chr5_1:29469879-29469898 Msa0727230:CDS 65.0%
GCCATGGAAGCTGCCATCGC+TGG - chr5_1:29470000-29470019 Msa0727230:intron 65.0%
GCCAGCGATGGCAGCTTCCA+TGG + chr5_1:29470004-29470023 None:intergenic 65.0%
CTGATACTCGGGGCCAGCGA+TGG + chr5_1:29470016-29470035 None:intergenic 65.0%
! CTGAGTGGATGGCACCGGGG+TGG + chr5_1:29469896-29469915 None:intergenic 70.0%
TGGCGGCGAGGGTTCCATCG+TGG - chr5_1:29474948-29474967 Msa0727230:intron 70.0%
CGGCGAGGGTTCCATCGTGG+CGG - chr5_1:29474951-29474970 Msa0727230:intron 70.0%
GGGTTCCATCGTGGCGGCGA+TGG - chr5_1:29474957-29474976 Msa0727230:intron 70.0%
! CTGAGTGGATGGCACCGGGG+TGG + chr5_1:29469896-29469915 None:intergenic 70.0%
GCCCACCATCGCCGCCACGA+TGG + chr5_1:29474965-29474984 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 29468065 29478441 29468065 ID=Msa0727230;Name=Msa0727230
chr5_1 mRNA 29468065 29478441 29468065 ID=Msa0727230-mRNA-1;Parent=Msa0727230;Name=Msa0727230-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|0|0|9|0|1226
chr5_1 exon 29478193 29478441 29478193 ID=Msa0727230-mRNA-1:exon:10042;Parent=Msa0727230-mRNA-1
chr5_1 exon 29477946 29478156 29477946 ID=Msa0727230-mRNA-1:exon:10041;Parent=Msa0727230-mRNA-1
chr5_1 exon 29477737 29477933 29477737 ID=Msa0727230-mRNA-1:exon:10040;Parent=Msa0727230-mRNA-1
chr5_1 exon 29477523 29477724 29477523 ID=Msa0727230-mRNA-1:exon:10039;Parent=Msa0727230-mRNA-1
chr5_1 exon 29477169 29477417 29477169 ID=Msa0727230-mRNA-1:exon:10038;Parent=Msa0727230-mRNA-1
chr5_1 exon 29476942 29477141 29476942 ID=Msa0727230-mRNA-1:exon:10037;Parent=Msa0727230-mRNA-1
chr5_1 exon 29476682 29476920 29476682 ID=Msa0727230-mRNA-1:exon:10036;Parent=Msa0727230-mRNA-1
chr5_1 exon 29476465 29476675 29476465 ID=Msa0727230-mRNA-1:exon:10035;Parent=Msa0727230-mRNA-1
chr5_1 exon 29468065 29469987 29468065 ID=Msa0727230-mRNA-1:exon:10034;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29478193 29478441 29478193 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29477946 29478156 29477946 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29477737 29477933 29477737 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29477523 29477724 29477523 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29477169 29477417 29477169 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29476942 29477141 29476942 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29476682 29476920 29476682 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29476465 29476675 29476465 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
chr5_1 CDS 29468065 29469987 29468065 ID=Msa0727230-mRNA-1:cds;Parent=Msa0727230-mRNA-1
Gene Sequence

>Msa0727230

ATGGCCTCCGTCACTCTCGTTGGCCCACCTGAGATCTATACTCTCAAATCAAACCCTAACCCTACCACCACCACCACCGCTCAAACCACCACTCAAACCACCACCACCACTAACGATGTCTTCGTCGATCAAATGGTAGCCAACTTCAATTCTCTTCCAAGGAACCGAAACCCACCGATGGGGTTGACTGAAAACATGTCACCAACGTTTCTCTCCACCGGTAACCCTTGTCTCGATTTCTTCTTCCATAGGCTCAAACTAGCTTGGTCCCAAAACCCTCTCACTGCCCTCAAACTCGTCTGTAACCTCCGTGGTGTTCGTGGTACCGGCAAGTCCAACAAAGAAGGCTTCTATGCTGCCGCTCTATGGTTTCATGAAAATCATCCTAAAACCCTAGCTTCCAATGTTCCTTCCCTCGCTGACTTTGGTTACTTCAAAGATCTCCCTGAGATCCTCTATCGTTCTGAAGTTCGCAAAACGCAGAAAGAAGAGTGGAGGGAAAGGAAATCTGGATCCAAAAGGAAATCTTCATCTTCATCAGCCCCTTTTTTAAGGAGAGGAATAAACAAAAAACAACGACACCACCACAACAAGAACTACAACAACAAGGACGTCAAGGATAACAAAGGGTGGAAGGGTACTGAGAAAGACTCCATCGTGGCAGCGAGAGTTAAGGCTCAGAAGGAAGCTGCTCATGCTTTGAAGGAAGAGAAGAGGATTGCCTTGGCTAAGAAGCTTGTTGATCGTTACACTACTGATCCCAATTTCAAGTTTCTTCATGATTGTATCTCTGATCATTTTGCTGATTGTTTGAAGAAGGATCTCGAGTTTTTGAAATCTGGGTCGCCCACAAAAATCAGTGTGGAGGAGGCGCATTATGCTTATAGGGTTCGTGATCGTTTGAGGAAAGATGTGTTGGTGCCGTTGAGGAAGGTGTTGGAGTTGCCTGAGGTGTTTATTGGTGCTAATCAATGGGGTTTGATTCCTTACAATAGGGTTGCTTCTGTGGCCATGAAGTTTTATAAGGAGAAGTTTTTGAAGCATGATAAGGAGAGGTTTGAGAAGTACTTGGAGGATGTGAAGGCAGGGAAGACTACTATTGCTGCTGAGTCTTTGCGTGATGGAGATGGTGAAGTGGCTGAGTTGCAGTGGAAGAGAATCGTTGATGATTTGCTCAAGAAGGGAAAGATGAGGAATTGTCTTGCTGTGTGTGATGTGTCTGGGAGTATGCATGGGACCCCTATGGAGGTGTGTGTAGCATTGGGGTTGTTGGTGTCTGAATTGAACGAGGAACCATGGAAAGGGAAGCCTCAGCTTCATGTGATTGAGGGGGATGATCTGAAGTCCAAGACAAAGTTTGTGAGGAACATGGATTGGGGGATGAACACTGATTTCCAGAAGGTGTTTGATCGCATATTGGATGTGGCTGTCAATGGGAATCTCAAGGAGGATCAGATGATTAAGAGGATCTTTGTCTTTAGTGACATGGAGTTTGATCAAGCGTCTGCAAACTCTTGGGAGACCGATTACCAAGCAATCACTAGGAAAAAGAAAGGGTATGGTTCTGCTGTGCCTCAGATAGTTTTTTGGAATCTGAGAGACTCGAAGGCCACCCCGGTGCCATCCACTCAGAAAGGAGTGGCACTGGTAAGTGGTTTTTCGAAGAATCTGCTGACATTGTTCTTGGATAATGAAGGTGATATAAGCCCTGTAGAAGCCATGGAAGCTGCCATCGCTGGCCCCGAGTATCAGAAACTAATCTATTCTCTCAAATCAAACCCTAACCCTACCACCACTAACACCACCGCTCAAACCTCCACAACAACCACTAACGATGTCTTAGTCGATCAAATGGTGGCCAACTTCAATTCTCTGGCAAGCAACCAAAACCCACCGATGGGGTTGACAGAGAACATGTCACCAACGTTTCTCTCTACTGGTAACCCATGTCTTGATTTCTTCTTCCATGTTGTTCCTGATACTCCTTCTGAGACACTCGTCGAGAGACTCAAACTAGCTTGGTCCCAAAATCCACTCACCACCCTAAAACTCGTCTGTAACCTTCGTGGTGTTCGTGGTACCGGTAAGTCCGATAAAGAAGGCTTCTACGCTGCCGCTCTATGGTTTCATGAAAATCACCCTAAAACCCTAGCTACCAATGTTCCTTCCCTCGCTGACTTTGGTTACTTCAAAGATCTCCCTGAGATCCTCTACCGTCTTCTCGAAGGTTCCAAAGTTCGCAAAATGCAGAAAGAAGAGTGGAAGGAAAGGAAATCTGGATCCAAAAGAAAATCTTCATCAATAACCCCTTTTGATTTTGATTTTGATTTTAGGAGAGGAATACATAAAAAACAACGACACCACAACAACAAAAACAAGAAAGACTTCATCAAGACTGAAGAGGTGGCAGCGAGAGATAAGGCTCAGAAAGAAGCTGCTCACGTTTTGAAGGAAGAGAAGAGGATTGCATTAGCTAAGAAGCTTGTTGATCGTTACACTACTGATCCCAATTTCAAGTTTCTTCATGATTGTATCTCTGATCATTTTGCTGATTGTTTGAAGAAGGATCTCGAGTTTTTGAAATCTGGGTCGCCCACAAAAATCAGTCTTGCTGCTAAATGGTGCCCTTCCGTTGACTCTTCCTTTGATCGGTCAACGCTGTTATGTGAGACCATTGCCAAGAGGATCTTCCCTTGGGAGGAATATGAAGGTGTGGAGGAGGCGCATTATGCTTATAGGGTTCGTGATCGTTTGAGGAAAGATGTGTTGGTGCCGTTGAGGAAGGTGTTGGAATTGCCTGAGGTGTTTATTGGTTCTAATCAATGGGATTTGATTCCTTACAATAGGGTGGCTTCTGTAGCAATGAAGTTTTATAAGGAGAAGTTTTTGAAGCATGATAAGGAGAGGTTTGAGAAGTACTTGGAGGATGTGAAGGCAGGGAAGACTACTATTGCTGCTGGTGCTTTGCTTCCTCATGAGATTATAGGGTCTTTGGGGGATGGAGATGGTGGAGAAGTGGCTGAGTTGCAGTGGAAGAGAATTGTTGATGATTTGCTTAAGAAAGGAAAGATGAAAAATTGTCTTGCAGTGTGTGATGTGTCTGGGAGCATGTCTGGGACTCCTATGGAGGTGTCTGTGGCATTGGGGTTGTTGGTGTCCGAATTGAGTGAGGAACCATGGAAAGGGAAGGTTATTACTTTCAGTGCAGAGCCTCAGCTTCATGTGATTCAGGGGGATGATCTGAAGTCCAAGACACAGTTCGTGAGGGATATGGATTGGGGGATGAACACTGATTTCCAGAAGGTGTTTGATCGCATATTGGATGTGGCTGTCAATGGGAATCTCAAGGAGGATCAGATGATTAAGAGGATCTTCGTGTTCAGTGACATGGAGTTTGATCAAGCGTCTGCAAACTCTTGGGAGACCGATTACCAAGCAATCACTAGGAAGTATAGCGAGAAAGGGTATGGTTCAGCTGTGCCTCAGATAGTCTTTTGGAATCTGAGAGACTCGAAGGCCACCCCGGTGCCATCCACTCAGAAAGGAGTGGCGCTGGTAAGTGGGTTTTCAAAGAATCTGCTGACATTGTTCTTGGATAATGAAGGTGATATAAGCCCTGTAGAAGCCATGGAAGCTGCCATCGCTGGCCCCGAGTATCAGAAACTAGTTGTGCTGGATTGA
Protein sequence

>Msa0727230

MASVTLVGPPEIYTLKSNPNPTTTTTAQTTTQTTTTTNDVFVDQMVANFNSLPRNRNPPMGLTENMSPTFLSTGNPCLDFFFHRLKLAWSQNPLTALKLVCNLRGVRGTGKSNKEGFYAAALWFHENHPKTLASNVPSLADFGYFKDLPEILYRSEVRKTQKEEWRERKSGSKRKSSSSSAPFLRRGINKKQRHHHNKNYNNKDVKDNKGWKGTEKDSIVAARVKAQKEAAHALKEEKRIALAKKLVDRYTTDPNFKFLHDCISDHFADCLKKDLEFLKSGSPTKISVEEAHYAYRVRDRLRKDVLVPLRKVLELPEVFIGANQWGLIPYNRVASVAMKFYKEKFLKHDKERFEKYLEDVKAGKTTIAAESLRDGDGEVAELQWKRIVDDLLKKGKMRNCLAVCDVSGSMHGTPMEVCVALGLLVSELNEEPWKGKPQLHVIEGDDLKSKTKFVRNMDWGMNTDFQKVFDRILDVAVNGNLKEDQMIKRIFVFSDMEFDQASANSWETDYQAITRKKKGYGSAVPQIVFWNLRDSKATPVPSTQKGVALVSGFSKNLLTLFLDNEGDISPVEAMEAAIAGPEYQKLIYSLKSNPNPTTTNTTAQTSTTTTNDVLVDQMVANFNSLASNQNPPMGLTENMSPTFLSTGNPCLDFFFHVVPDTPSETLVERLKLAWSQNPLTTLKLVCNLRGVRGTGKSDKEGFYAAALWFHENHPKTLATNVPSLADFGYFKDLPEILYRLLEGSKVRKMQKEEWKERKSGSKRKSSSITPFDFDFDFRRGIHKKQRHHNNKNKKDFIKTEEVAARDKAQKEAAHVLKEEKRIALAKKLVDRYTTDPNFKFLHDCISDHFADCLKKDLEFLKSGSPTKISLAAKWCPSVDSSFDRSTLLCETIAKRIFPWEEYEGVEEAHYAYRVRDRLRKDVLVPLRKVLELPEVFIGSNQWDLIPYNRVASVAMKFYKEKFLKHDKERFEKYLEDVKAGKTTIAAGALLPHEIIGSLGDGDGGEVAELQWKRIVDDLLKKGKMKNCLAVCDVSGSMSGTPMEVSVALGLLVSELSEEPWKGKVITFSAEPQLHVIQGDDLKSKTQFVRDMDWGMNTDFQKVFDRILDVAVNGNLKEDQMIKRIFVFSDMEFDQASANSWETDYQAITRKYSEKGYGSAVPQIVFWNLRDSKATPVPSTQKGVALVSGFSKNLLTLFLDNEGDISPVEAMEAAIAGPEYQKLVVLD*