AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0434830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434830 MtrunA17_Chr3g0141571 96.476 227 4 1 1 227 1 223 1.83e-157 435
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0434830 AT5G42765.1 57.143 196 75 2 40 227 35 229 9.59e-75 226

Find 165 sgRNAs with CRISPR-Local

Find 440 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAATTTGAGCAAGGAATT+AGG 0.146582 3_2:-87852189 Msa0434830:CDS
TCGCGGTGTGTTTCTCTTTC+GGG 0.162800 3_2:+87855611 None:intergenic
CTGGCCAATCACTGTAAAAT+TGG 0.235892 3_2:-87850778 Msa0434830:three_prime_UTR
ATATCGTTTGAGTTGCTTAA+AGG 0.250789 3_2:+87850403 Msa0434820:CDS
TTCGCGGTGTGTTTCTCTTT+CGG 0.258048 3_2:+87855610 None:intergenic
TGATCCACTTGCTGCTTTGC+TGG 0.277427 3_2:+87849630 Msa0434820:CDS
AGCTTGTTGAAGAGATTTAA+TGG 0.282957 3_2:-87850887 Msa0434830:three_prime_UTR
TGCCACTCTGGTTAAGGATT+TGG 0.289529 3_2:-87850534 Msa0434830:three_prime_UTR
ATCATGTCTGATCAAGTAAA+TGG 0.290117 3_2:+87849445 Msa0434820:exon
TTGTACTTGGTGGAAGCTTC+TGG 0.291125 3_2:+87850968 Msa0434820:CDS
ATTGTGTGTTACACAAAATA+AGG 0.292177 3_2:-87849424 Msa0434830:three_prime_UTR
CCTGTGCTTCTCTGCCATTC+GGG 0.295298 3_2:-87849789 Msa0434830:three_prime_UTR
CAAATTTGAGCAAGGAATTA+GGG 0.295865 3_2:-87852188 Msa0434830:CDS
AGAGGAGCTTAAAGAGGTTT+GGG 0.296735 3_2:-87849357 Msa0434830:three_prime_UTR
GCTTAAAGAGGTTTGGGGTT+GGG 0.307755 3_2:-87849351 Msa0434830:three_prime_UTR
CCACTTGCTGCTTTGCTGGC+AGG 0.313162 3_2:+87849634 Msa0434820:CDS
CGCGGTGGCGGTGGCGGTGG+CGG 0.328455 3_2:+87855506 None:intergenic
CTTTGCTAGATAATCTTATA+AGG 0.329612 3_2:-87854364 Msa0434830:intron
TAGAGGAGCTTAAAGAGGTT+TGG 0.349102 3_2:-87849358 Msa0434830:three_prime_UTR
GTAAAATTGGAATACTGAAT+TGG 0.351492 3_2:-87850765 Msa0434830:three_prime_UTR
ATGGAAAAGCTTCAAATTGC+AGG 0.352932 3_2:+87850581 Msa0434820:CDS
TTGCGCGGTGGCGGTGGCGG+TGG 0.354143 3_2:+87855503 None:intergenic
GTCAGCTGCCACTCTGGTTA+AGG 0.354833 3_2:-87850540 Msa0434830:three_prime_UTR
CAGTTGCATGGCGTTGGATT+GGG 0.355782 3_2:-87850660 Msa0434830:three_prime_UTR
GCAGTTGCATGGCGTTGGAT+TGG 0.356550 3_2:-87850661 Msa0434830:three_prime_UTR
ACCTGTGCTTCTCTGCCATT+CGG 0.360737 3_2:-87849790 Msa0434830:three_prime_UTR
CAGCATGGTGTTCCGTCATC+TGG 0.362251 3_2:-87850941 Msa0434830:three_prime_UTR
GGAAAATTGCGCGGTGGCGG+TGG 0.364743 3_2:+87855497 None:intergenic
CACTTGCTGCTTTGCTGGCA+GGG 0.366484 3_2:+87849635 Msa0434820:CDS
AACAATGCTCGTGAAACTTC+TGG 0.370805 3_2:+87849706 Msa0434820:CDS
GGAGACCCAGATGCCCATTT+CGG 0.372976 3_2:+87850851 Msa0434820:CDS
TGACTTTGCAGAAGTCTTAG+AGG 0.381682 3_2:+87850445 Msa0434820:CDS
ACACAAAATAAGGGATTAAG+AGG 0.386028 3_2:-87849414 Msa0434830:three_prime_UTR
AAGAGGCCGAAATGGGCATC+TGG 0.390257 3_2:-87850857 Msa0434830:three_prime_UTR
GTTGCGTGGACCTGTCGAAC+AGG 0.390970 3_2:-87849526 Msa0434830:three_prime_UTR
GAAAATGTGAGAAGAGGAAA+GGG 0.391368 3_2:+87855452 None:intergenic
TCTGGTTAAGGATTTGGCTT+TGG 0.395848 3_2:-87850528 Msa0434830:three_prime_UTR
AAATTGCGCGGTGGCGGTGG+CGG 0.397461 3_2:+87855500 None:intergenic
ACATGTGTGAAGCCAATAGA+TGG 0.399797 3_2:-87850812 Msa0434830:three_prime_UTR
TTTGGCAAGCTGACCTTTGA+AGG 0.402317 3_2:-87849570 Msa0434830:three_prime_UTR
GATCATTCAAGAGGCCGAAA+TGG 0.408961 3_2:-87850865 Msa0434830:three_prime_UTR
ATGCACAGGTGTGCACATTT+CGG 0.409608 3_2:-87854451 Msa0434830:intron
CATGTAAAACTTTCACAGAT+TGG 0.409955 3_2:+87850830 Msa0434820:CDS
TGCATGTTATTTATATATAG+AGG 0.416921 3_2:-87849375 Msa0434830:three_prime_UTR
GGTGGCGGTGGCGGTGGCGG+TGG 0.417428 3_2:+87855509 None:intergenic
AGCTTAAAGAGGTTTGGGGT+TGG 0.418278 3_2:-87849352 Msa0434830:three_prime_UTR
AGCTATTCAGATCTGCTGCC+AGG 0.418971 3_2:-87855028 Msa0434830:CDS
TTGTGTGTTACACAAAATAA+GGG 0.419061 3_2:-87849423 Msa0434830:three_prime_UTR
ATCCTCTGGGACACAATCCC+TGG 0.420882 3_2:+87855010 None:intergenic
CACTATTCTGCAAGCAGCTA+AGG 0.423193 3_2:+87850475 Msa0434820:CDS
GAAAGGGGAAGGTTACGTTT+TGG 0.426235 3_2:+87855468 None:intergenic
CCTCAACTCCGGTGTTAGCT+TGG 0.430121 3_2:+87854967 None:intergenic
GCAAAGGCATAGCAGGAGTT+AGG 0.431341 3_2:-87855662 Msa0434830:five_prime_UTR
ATTTGCCAGCCCACTGATAG+AGG 0.436497 3_2:+87852527 None:intergenic
CAGGTTGTTCTCCTAGGTGC+AGG 0.437261 3_2:+87849808 Msa0434820:CDS
ACTTGCTGCTTTGCTGGCAG+GGG 0.441240 3_2:+87849636 Msa0434820:CDS
TCTTATGTCAGCTGCCACTC+TGG 0.442727 3_2:-87850546 Msa0434830:three_prime_UTR
CTGACATAAGAGAAAATGAT+TGG 0.443102 3_2:+87850558 Msa0434820:CDS
GGTTTAGCTCTGGCCATGCT+TGG 0.443811 3_2:-87849480 Msa0434830:three_prime_UTR
AAAGGACAGCGATGTCTTTG+AGG 0.446558 3_2:+87850421 Msa0434820:CDS
AGCCTCCTTGCTTGGAAAGA+AGG 0.453221 3_2:-87854411 Msa0434830:CDS
CCTGCCTCCGCCATTGACAT+TGG 0.453752 3_2:-87855384 Msa0434830:CDS
TGCAAAATTTGATGCAGGAA+TGG 0.455246 3_2:+87850370 Msa0434820:intron
AAGATTATCTAGCAAAGCTT+CGG 0.455272 3_2:+87854370 None:intergenic
GGGTCAGTATGTAACAAGTC+TGG 0.458829 3_2:-87849505 Msa0434830:three_prime_UTR
ACGAAAGAATTCCTATCCTC+TGG 0.460313 3_2:+87854996 None:intergenic
TAGCCCTTCCTGCAGCCGTT+TGG 0.463381 3_2:-87849588 Msa0434830:three_prime_UTR
TCTCAGCAGTTGCATGGCGT+TGG 0.466299 3_2:-87850666 Msa0434830:three_prime_UTR
TCCTTGCAGTTAGAACGCTT+TGG 0.467503 3_2:+87849734 Msa0434820:CDS
AAGAATGCAGCCTCCTTGCT+TGG 0.468358 3_2:-87854419 Msa0434830:CDS
CCAATGTCAATGGCGGAGGC+AGG 0.469297 3_2:+87855384 None:intergenic
CGCAACAATTGAAAAGGAAT+GGG 0.471274 3_2:+87849543 Msa0434820:CDS
ACCATGCTGTCGCTTGTACT+TGG 0.472145 3_2:+87850955 Msa0434820:CDS
ATCATTCAAGAGGCCGAAAT+GGG 0.474174 3_2:-87850864 Msa0434830:three_prime_UTR
ATTGCTTGCCTTATCTTTCG+CGG 0.477053 3_2:+87855594 None:intergenic
CTTGCCAAACGGCTGCAGGA+AGG 0.480463 3_2:+87849584 Msa0434820:CDS
GAGGGAAAATTGCGCGGTGG+CGG 0.481339 3_2:+87855494 None:intergenic
TTGCCAAACGGCTGCAGGAA+GGG 0.481862 3_2:+87849585 Msa0434820:CDS
TACCACAGAAGAGCACGGTC+TGG 0.483659 3_2:+87850609 Msa0434820:CDS
AGCACGGTCTGGATTCTAGA+AGG 0.484304 3_2:+87850620 Msa0434820:CDS
TTTCAGCAGGACCAAAGGAT+TGG 0.485707 3_2:-87855281 Msa0434830:intron
GAAGCACAGGTTGTTCTCCT+AGG 0.487419 3_2:+87849802 Msa0434820:CDS
TCAGCTTGCCAAACGGCTGC+AGG 0.487788 3_2:+87849580 Msa0434820:CDS
TGGTGTTCCGTCATCTGGAT+TGG 0.488532 3_2:-87850936 Msa0434830:three_prime_UTR
ATAGATGGTAAAAGTTGGTC+TGG 0.488683 3_2:-87850797 Msa0434830:three_prime_UTR
GAAACACACCGCGAAAGATA+AGG 0.491074 3_2:-87855602 Msa0434830:five_prime_UTR
ACGCAACAATTGAAAAGGAA+TGG 0.493384 3_2:+87849542 Msa0434820:CDS
AATGGAAGCAAAGGCATAGC+AGG 0.495715 3_2:-87855669 Msa0434830:five_prime_UTR
TGGATTGGGCGAGGTAGTAT+AGG 0.496759 3_2:-87850646 Msa0434830:three_prime_UTR
ATATATAGAGGAGCTTAAAG+AGG 0.501537 3_2:-87849363 Msa0434830:three_prime_UTR
ACATACTGACCCTGTTCGAC+AGG 0.504111 3_2:+87849516 Msa0434820:CDS
TTATGCGCAGAACTTTGATC+GGG 0.506535 3_2:-87850995 Msa0434830:intron
GCAAAGCAGCAAGTGGATCA+TGG 0.508155 3_2:-87849627 Msa0434830:three_prime_UTR
TTATTTACAGTCAGATTTCG+AGG 0.508821 3_2:+87852161 None:intergenic
CCCGAATGGCAGAGAAGCAC+AGG 0.509784 3_2:+87849789 Msa0434820:CDS
GCTGCTGGTAACGGCATTGT+TGG 0.509788 3_2:+87855561 None:intergenic
GACAGGAGCAAGTAGAAACT+TGG 0.510332 3_2:+87855233 None:intergenic
CAAAATAGCAGATGCTGTAT+CGG 0.511930 3_2:-87852230 Msa0434830:CDS
CATAAGAGAAAATGATTGGA+TGG 0.512586 3_2:+87850562 Msa0434820:CDS
CATAGCAGGAGTTAGGACTT+AGG 0.521049 3_2:-87855655 Msa0434830:five_prime_UTR
GGTCCACGCAACAATTGAAA+AGG 0.522870 3_2:+87849537 Msa0434820:CDS
AGAAAATGTGAGAAGAGGAA+AGG 0.523134 3_2:+87855451 None:intergenic
ATCCGATGCAAGTTCAATGT+TGG 0.523773 3_2:+87852500 None:intergenic
ATTATGCGCAGAACTTTGAT+CGG 0.524410 3_2:-87850996 Msa0434830:intron
GCTTTGGTTTGATTCTAGAC+TGG 0.526315 3_2:+87849750 Msa0434820:CDS
GAAACTGTAGCTGCTGGTAA+CGG 0.528950 3_2:+87855552 None:intergenic
ATGCTGTCGCTTGTACTTGG+TGG 0.529839 3_2:+87850958 Msa0434820:CDS
GGATTAAGAGGTTTGTGAAG+AGG 0.530128 3_2:-87849402 Msa0434830:three_prime_UTR
CTTTCACGAGAGGCATCGAC+AGG 0.534229 3_2:+87855216 None:intergenic
ACAAGCTCCGCAACTTGCCT+AGG 0.536607 3_2:+87850903 Msa0434820:CDS
GCTTCGGCTTCTAACTTCAC+AGG 0.539658 3_2:+87854386 None:intergenic
CCAAGCTAACACCGGAGTTG+AGG 0.540940 3_2:-87854967 Msa0434830:intron
CGGCTGCAGGAAGGGCTATG+TGG 0.545627 3_2:+87849593 Msa0434820:CDS
CTTACAGATGCCAATGTCAA+TGG 0.546752 3_2:+87855374 None:intergenic
GCATGGCGTTGGATTGGGCG+AGG 0.548828 3_2:-87850655 Msa0434830:three_prime_UTR
ATTCGCCTCTATCAGTGGGC+TGG 0.549750 3_2:-87852532 Msa0434830:CDS
ACTTATTCATGAAGTCTGCT+AGG 0.551456 3_2:-87850727 Msa0434830:three_prime_UTR
AACCAACATTGAACTTGCAT+CGG 0.552247 3_2:-87852502 Msa0434830:CDS
AAGTCTGGAAGGTTTAGCTC+TGG 0.555279 3_2:-87849490 Msa0434830:three_prime_UTR
AGGATCCTTCTTTCCAAGCA+AGG 0.556645 3_2:+87854406 None:intergenic
GGGATTGTGTCCCAGAGGAT+AGG 0.557429 3_2:-87855007 Msa0434830:CDS
CGAAAGAATTCCTATCCTCT+GGG 0.559179 3_2:+87854997 None:intergenic
AGAGCAGAAACTGTAGCTGC+TGG 0.561845 3_2:+87855546 None:intergenic
AGAGGCCGAAATGGGCATCT+GGG 0.562365 3_2:-87850856 Msa0434830:three_prime_UTR
GAGGAGCTTAAAGAGGTTTG+GGG 0.562575 3_2:-87849356 Msa0434830:three_prime_UTR
AGGAATGGGATTTCCTTCAA+AGG 0.566300 3_2:+87849557 Msa0434820:CDS
GCTATTCAGATCTGCTGCCA+GGG 0.570782 3_2:-87855027 Msa0434830:CDS
AGCCAATAGATGGTAAAAGT+TGG 0.570838 3_2:-87850802 Msa0434830:three_prime_UTR
GCGAGAGAAAATGTGAGAAG+AGG 0.571071 3_2:+87855446 None:intergenic
CCTGCCAGCAAAGCAGCAAG+TGG 0.579542 3_2:-87849634 Msa0434830:three_prime_UTR
GGTGTGTTTCTCTTTCGGGT+CGG 0.581077 3_2:+87855615 None:intergenic
ACCAAAGCGTTCTAACTGCA+AGG 0.581770 3_2:-87849735 Msa0434830:three_prime_UTR
AGATCATTCGCCTCTATCAG+TGG 0.582090 3_2:-87852537 Msa0434830:CDS
GATGCCAATGTCAATGGCGG+AGG 0.585232 3_2:+87855380 None:intergenic
ATCCAGACCGTGCTCTTCTG+TGG 0.590430 3_2:-87850611 Msa0434830:three_prime_UTR
GCTTGCAAGACAACCAAGCA+TGG 0.591039 3_2:+87849467 Msa0434820:CDS
TAAAATTCTCAGCAGTTGCA+TGG 0.596944 3_2:-87850672 Msa0434830:three_prime_UTR
GGATTGGTTTGTAATGACCT+AGG 0.599942 3_2:-87850920 Msa0434830:three_prime_UTR
TGTGAGAAGAGGAAAGGGGA+AGG 0.601169 3_2:+87855457 None:intergenic
TCTCTCGACAAATTTGAGCA+AGG 0.604357 3_2:-87852196 Msa0434830:CDS
GATCATTCGCCTCTATCAGT+GGG 0.609222 3_2:-87852536 Msa0434830:CDS
TCAAAGGTCAGCTTGCCAAA+CGG 0.612550 3_2:+87849573 Msa0434820:CDS
ACCAAGTACAAGCGACAGCA+TGG 0.615849 3_2:-87850956 Msa0434830:three_prime_UTR
AGAGCGAAGGCTTTCACGAG+AGG 0.617224 3_2:+87855206 None:intergenic
GTAATGACCTAGGCAAGTTG+CGG 0.618313 3_2:-87850910 Msa0434830:three_prime_UTR
GATTTAATGGATCATTCAAG+AGG 0.619216 3_2:-87850874 Msa0434830:three_prime_UTR
CAGTATGTAACAAGTCTGGA+AGG 0.620530 3_2:-87849501 Msa0434830:three_prime_UTR
GATGTTCTCAGTTCCCCGAA+TGG 0.621167 3_2:+87849775 Msa0434820:CDS
GTAGCTTTCCAAGCTAACAC+CGG 0.624252 3_2:-87854975 Msa0434830:CDS
CTGTGCTTCTCTGCCATTCG+GGG 0.625733 3_2:-87849788 Msa0434830:three_prime_UTR
ACATTGAACTTGCATCGGAT+AGG 0.626460 3_2:-87852497 Msa0434830:intron
AAAATGTGAGAAGAGGAAAG+GGG 0.629256 3_2:+87855453 None:intergenic
CAATTGTGTCTTAACTCACA+CGG 0.633180 3_2:+87850700 Msa0434820:CDS
TTACAAACCAATCCAGATGA+CGG 0.634102 3_2:+87850929 Msa0434820:CDS
ACAAAGACAAACCTCAACTC+CGG 0.639797 3_2:+87854956 None:intergenic
TTGCGTGGACCTGTCGAACA+GGG 0.640836 3_2:-87849525 Msa0434830:three_prime_UTR
TTTCTTACCACAGAAGAGCA+CGG 0.661986 3_2:+87850604 Msa0434820:CDS
AGCCAAATCCTTAACCAGAG+TGG 0.662283 3_2:+87850532 Msa0434820:CDS
GTGTCTACAAACCTGCACCT+AGG 0.662807 3_2:-87849819 Msa0434830:intron
ATCCTTCTTTCCAAGCAAGG+AGG 0.665711 3_2:+87854409 None:intergenic
ACAGATGCCAATGTCAATGG+CGG 0.683825 3_2:+87855377 None:intergenic
TGGAGGGAGGGAAAATTGCG+CGG 0.683829 3_2:+87855488 None:intergenic
GAATACTGAATTGGATAGCG+TGG 0.687583 3_2:-87850756 Msa0434830:three_prime_UTR
TGCCAGGGATTGTGTCCCAG+AGG 0.697985 3_2:-87855012 Msa0434830:CDS
AGGGAGGGAAAATTGCGCGG+TGG 0.737001 3_2:+87855491 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAATTTTTTTTATTTTC+AGG - chr3_2:87852763-87852782 Msa0434830:intron 10.0%
!!! TTTTAATTAATTCTTATTGT+TGG + chr3_2:87853943-87853962 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTATGCAC+AGG - chr3_2:87850553-87850572 Msa0434830:three_prime_UTR 15.0%
!!! TATATCAATAGAATTGTTTT+TGG - chr3_2:87850872-87850891 Msa0434830:three_prime_UTR 15.0%
!! AATACAATAATATAGAAAAG+TGG + chr3_2:87850900-87850919 Msa0434820:CDS 15.0%
!! TTATTTATGATTATCATTTC+TGG - chr3_2:87852699-87852718 Msa0434830:intron 15.0%
!!! GAGAATTTTAAAAATTAGAA+AGG + chr3_2:87853014-87853033 None:intergenic 15.0%
!!! CTAATTTTTAAAATTCTCTT+TGG - chr3_2:87853016-87853035 Msa0434830:intron 15.0%
!! AATTATATGATGAAGAATAA+TGG + chr3_2:87853755-87853774 None:intergenic 15.0%
!! ACATTGTTTCATATCTTATT+AGG - chr3_2:87849891-87849910 Msa0434830:intron 20.0%
!! CATTGTTTCATATCTTATTA+GGG - chr3_2:87849892-87849911 Msa0434830:intron 20.0%
!! TTGTTATCTATTAGACTTAA+TGG - chr3_2:87850447-87850466 Msa0434830:three_prime_UTR 20.0%
!! TGTTATCTATTAGACTTAAT+GGG - chr3_2:87850448-87850467 Msa0434830:three_prime_UTR 20.0%
!! TATAAGGAGAAAAATTTAGA+AGG - chr3_2:87851338-87851357 Msa0434830:intron 20.0%
!! ATAAGGAGAAAAATTTAGAA+GGG - chr3_2:87851339-87851358 Msa0434830:intron 20.0%
!! TATAAGGAGAAAAATTTAGA+AGG - chr3_2:87851338-87851357 Msa0434830:intron 20.0%
!! ATAAGGAGAAAAATTTAGAA+GGG - chr3_2:87851339-87851358 Msa0434830:intron 20.0%
!! CTATTCTATAGATTAAACAT+TGG - chr3_2:87852260-87852279 Msa0434830:intron 20.0%
!! ATCAAAGGATATTAAAAAGA+GGG + chr3_2:87852387-87852406 None:intergenic 20.0%
!!! ATTTTCTTTATGCTATCATT+TGG - chr3_2:87852605-87852624 Msa0434830:intron 20.0%
!!! AAACTTTGAAGATGAATAAA+GGG + chr3_2:87852669-87852688 None:intergenic 20.0%
!!! AAAACTTTGAAGATGAATAA+AGG + chr3_2:87852670-87852689 None:intergenic 20.0%
!! ATAAAAAAAATTGATTGCAG+AGG + chr3_2:87852759-87852778 None:intergenic 20.0%
!!! ATTTCTAATTTGTTCTTTGT+TGG - chr3_2:87853476-87853495 Msa0434830:intron 20.0%
!!! TTTCTAATTTGTTCTTTGTT+GGG - chr3_2:87853477-87853496 Msa0434830:intron 20.0%
!!! TGAAGAAAGTTACATTTTTT+AGG - chr3_2:87853671-87853690 Msa0434830:intron 20.0%
!!! GAAGAAAGTTACATTTTTTA+GGG - chr3_2:87853672-87853691 Msa0434830:intron 20.0%
!! GAAAAATTATTTCATCAAGA+AGG - chr3_2:87853780-87853799 Msa0434830:intron 20.0%
!! ATTCTATTCCTAGTTAATTT+GGG + chr3_2:87854905-87854924 None:intergenic 20.0%
!! TATTCTATTCCTAGTTAATT+TGG + chr3_2:87854906-87854925 None:intergenic 20.0%
!! AAAAGATATCTTGTCTTAAA+AGG - chr3_2:87854940-87854959 Msa0434830:intron 20.0%
!!! GTCTTAAAAGGTTTTAAATA+CGG - chr3_2:87854952-87854971 Msa0434830:intron 20.0%
!!! TGCATGTTATTTATATATAG+AGG - chr3_2:87855643-87855662 Msa0434830:five_prime_UTR 20.0%
! ATGATTCAAAATACAGTAAC+AGG + chr3_2:87849695-87849714 Msa0434820:CDS 25.0%
! AAAAACGGTAACAAAAGTTA+GGG + chr3_2:87849720-87849739 Msa0434820:CDS 25.0%
! AATCAATGTCTTGCTAATTA+GGG - chr3_2:87850118-87850137 Msa0434830:intron 25.0%
!!! TATTTTTTTAGGAGAGTGAA+TGG - chr3_2:87850269-87850288 Msa0434830:intron 25.0%
! TTATCTACCTTTCAATTGTT+TGG + chr3_2:87850358-87850377 Msa0434820:intron 25.0%
! GTTATCTATTAGACTTAATG+GGG - chr3_2:87850449-87850468 Msa0434830:three_prime_UTR 25.0%
! CTTTGCTAGATAATCTTATA+AGG - chr3_2:87850654-87850673 Msa0434830:three_prime_UTR 25.0%
! GAAATATTCAGTGTAAAGAA+AGG + chr3_2:87850743-87850762 Msa0434820:CDS 25.0%
! TTAATGTCAAAAACTCTTGA+TGG - chr3_2:87851087-87851106 Msa0434830:intron 25.0%
! TTGATAAAGAGAATGAAGTT+GGG + chr3_2:87851127-87851146 Msa0434820:three_prime_UTR 25.0%
! ATTGATAAAGAGAATGAAGT+TGG + chr3_2:87851128-87851147 Msa0434820:three_prime_UTR 25.0%
! TCTCTTTATCAATATGATGT+AGG - chr3_2:87851135-87851154 Msa0434830:intron 25.0%
! TTCACCTTCAAAAGAAATTT+CGG + chr3_2:87851470-87851489 None:intergenic 25.0%
! GAAACAAAAGTTAATATGCT+CGG + chr3_2:87851663-87851682 None:intergenic 25.0%
! TTAATGTCAAAAACTCTTGA+TGG - chr3_2:87851087-87851106 Msa0434830:intron 25.0%
!!! GATGGACTATTAACTATAAT+AGG + chr3_2:87852090-87852109 None:intergenic 25.0%
!!! ATAGTTCTTGTATTTTGAGA+TGG + chr3_2:87852108-87852127 None:intergenic 25.0%
!! AGAGTGGAAATTGATTTAAT+TGG + chr3_2:87852133-87852152 None:intergenic 25.0%
! GGGAAGTAAACAAAAAAAAA+AGG + chr3_2:87852292-87852311 None:intergenic 25.0%
! TAGCACATAGGAAATTTAAA+GGG + chr3_2:87852312-87852331 None:intergenic 25.0%
! TTAGCACATAGGAAATTTAA+AGG + chr3_2:87852313-87852332 None:intergenic 25.0%
! CATCAAAGGATATTAAAAAG+AGG + chr3_2:87852388-87852407 None:intergenic 25.0%
!! AGTCATTCATTTGATAATCT+CGG + chr3_2:87852734-87852753 None:intergenic 25.0%
! AAAGTTAGAGATAAGAAATC+AGG + chr3_2:87852986-87853005 None:intergenic 25.0%
! TGTATTAATACTTCTTCATC+TGG - chr3_2:87853229-87853248 Msa0434830:intron 25.0%
! ATTAAATGCATAGAAGACAT+AGG + chr3_2:87853394-87853413 None:intergenic 25.0%
! ATTTCTTGTATTTCTTTCCT+AGG - chr3_2:87853452-87853471 Msa0434830:intron 25.0%
! AGAACAAATTAGAAATTCCT+AGG + chr3_2:87853472-87853491 None:intergenic 25.0%
!!! TTCTAATTTGTTCTTTGTTG+GGG - chr3_2:87853478-87853497 Msa0434830:intron 25.0%
!!! TTGAAATGAGTTTTATGCAA+GGG + chr3_2:87853509-87853528 None:intergenic 25.0%
!!! TTTGAAATGAGTTTTATGCA+AGG + chr3_2:87853510-87853529 None:intergenic 25.0%
! AGTAAAGAACTTAAAGAATG+GGG + chr3_2:87853554-87853573 None:intergenic 25.0%
! CAGTAAAGAACTTAAAGAAT+GGG + chr3_2:87853555-87853574 None:intergenic 25.0%
! TCAGTAAAGAACTTAAAGAA+TGG + chr3_2:87853556-87853575 None:intergenic 25.0%
! TGATTAAACTGAGTTTGATT+TGG - chr3_2:87853578-87853597 Msa0434830:intron 25.0%
! AAATAAGGTTCGAATAACTT+AGG - chr3_2:87853806-87853825 Msa0434830:intron 25.0%
!!! TAGTCTTTTTCAATACAAGA+GGG + chr3_2:87853858-87853877 None:intergenic 25.0%
!!! ATAGTCTTTTTCAATACAAG+AGG + chr3_2:87853859-87853878 None:intergenic 25.0%
!! TATTCCAATTTTACAGTGAT+TGG + chr3_2:87854247-87854266 None:intergenic 25.0%
! GTAAAATTGGAATACTGAAT+TGG - chr3_2:87854253-87854272 Msa0434830:intron 25.0%
!! TAATTTGGGATGCAAATATT+TGG + chr3_2:87854891-87854910 None:intergenic 25.0%
! ATTGTGTGTTACACAAAATA+AGG - chr3_2:87855594-87855613 Msa0434830:five_prime_UTR 25.0%
! TTGTGTGTTACACAAAATAA+GGG - chr3_2:87855595-87855614 Msa0434830:five_prime_UTR 25.0%
GAAAAACGGTAACAAAAGTT+AGG + chr3_2:87849721-87849740 Msa0434820:CDS 30.0%
TTATTAGGGTCTGTTTGTTT+CGG - chr3_2:87849906-87849925 Msa0434830:intron 30.0%
CAATCAATGTCTTGCTAATT+AGG - chr3_2:87850117-87850136 Msa0434830:intron 30.0%
GGATGACATAATAGGATAAT+TGG - chr3_2:87850144-87850163 Msa0434830:intron 30.0%
AACCATACCAAACAATTGAA+AGG - chr3_2:87850348-87850367 Msa0434830:intron 30.0%
TACCTTTCAATTGTTTGGTA+TGG + chr3_2:87850353-87850372 Msa0434820:intron 30.0%
!! TAACATTCTTTTGGGAAAAG+GGG + chr3_2:87850483-87850502 Msa0434820:CDS 30.0%
!! CTAACATTCTTTTGGGAAAA+GGG + chr3_2:87850484-87850503 Msa0434820:CDS 30.0%
! ACTTGAGCTAACATTCTTTT+GGG + chr3_2:87850491-87850510 Msa0434820:CDS 30.0%
AAGATTATCTAGCAAAGCTT+CGG + chr3_2:87850651-87850670 Msa0434820:CDS 30.0%
! GATTTGATGGACACTAATTA+AGG + chr3_2:87850721-87850740 Msa0434820:CDS 30.0%
AGTGTAAAGAAAGGATTTGA+TGG + chr3_2:87850734-87850753 Msa0434820:CDS 30.0%
!!! TTCATTATTTTTAGTCCCTG+TGG - chr3_2:87850760-87850779 Msa0434830:three_prime_UTR 30.0%
TCTCAAATAGTGAAGATACT+TGG + chr3_2:87850788-87850807 Msa0434820:CDS 30.0%
GAAACCAAAGTTAATATGCT+CGG + chr3_2:87851065-87851084 Msa0434820:three_prime_UTR 30.0%
ATCAATATGATGTAGGACAA+AGG - chr3_2:87851142-87851161 Msa0434830:intron 30.0%
!! CAGTTTTATCTAAGAGAACA+GGG + chr3_2:87851398-87851417 Msa0434820:three_prime_UTR 30.0%
!! TCAGTTTTATCTAAGAGAAC+AGG + chr3_2:87851399-87851418 Msa0434820:three_prime_UTR 30.0%
TCACTAATTATCATTGTGGA+AGG + chr3_2:87851445-87851464 None:intergenic 30.0%
ATAGAGCAGCATATATACAT+AGG + chr3_2:87850935-87850954 Msa0434820:CDS 30.0%
TCTCTTTACCAATATGATGT+AGG - chr3_2:87851733-87851752 Msa0434830:intron 30.0%
!! CAGTTTTATCTAAGAGAACA+GGG + chr3_2:87851398-87851417 Msa0434820:three_prime_UTR 30.0%
!! TCAGTTTTATCTAAGAGAAC+AGG + chr3_2:87851399-87851418 Msa0434820:three_prime_UTR 30.0%
ATAAAACTGATTAGAGCATG+TGG - chr3_2:87852002-87852021 Msa0434830:intron 30.0%
TCACTAATTATCATTGTGGA+AGG + chr3_2:87851445-87851464 None:intergenic 30.0%
ACAATGATAATTAGTGAGAC+CGG - chr3_2:87851448-87851467 Msa0434830:intron 30.0%
TTCACCTTCAAAAGAAATTC+CGG + chr3_2:87852063-87852082 None:intergenic 30.0%
AAGTACGATTAACATAAGAG+TGG + chr3_2:87852149-87852168 None:intergenic 30.0%
TACTTAAATTGAACCCTTCA+TGG - chr3_2:87852164-87852183 Msa0434830:exon 30.0%
GGATATTAAAAAGAGGGAAA+AGG + chr3_2:87852381-87852400 None:intergenic 30.0%
!! TTGGTAATTAGCATGCATTT+TGG + chr3_2:87852411-87852430 None:intergenic 30.0%
ATAATAGTGTCCAGGATAAT+TGG - chr3_2:87852556-87852575 Msa0434830:intron 30.0%
TAATAGTGTCCAGGATAATT+GGG - chr3_2:87852557-87852576 Msa0434830:intron 30.0%
ACAAATTTGAGCAAGGAATT+AGG - chr3_2:87852829-87852848 Msa0434830:intron 30.0%
CAAATTTGAGCAAGGAATTA+GGG - chr3_2:87852830-87852849 Msa0434830:intron 30.0%
TTATTTACAGTCAGATTTCG+AGG + chr3_2:87852860-87852879 None:intergenic 30.0%
ATTCTCAGAATAGTTTCTAC+AGG - chr3_2:87853412-87853431 Msa0434830:intron 30.0%
!!! AAAGGCTATTTCTAGCTTTT+TGG - chr3_2:87853831-87853850 Msa0434830:intron 30.0%
!!! AGTCTTTTTCAATACAAGAG+GGG + chr3_2:87853857-87853876 None:intergenic 30.0%
TATTGGCAAAAAATGCTAGA+CGG + chr3_2:87853888-87853907 None:intergenic 30.0%
!! AGCTTGTTGAAGAGATTTAA+TGG - chr3_2:87854131-87854150 Msa0434830:intron 30.0%
! GATTTAATGGATCATTCAAG+AGG - chr3_2:87854144-87854163 Msa0434830:intron 30.0%
CATGTAAAACTTTCACAGAT+TGG + chr3_2:87854191-87854210 None:intergenic 30.0%
CATAAGAGAAAATGATTGGA+TGG + chr3_2:87854459-87854478 None:intergenic 30.0%
CTGACATAAGAGAAAATGAT+TGG + chr3_2:87854463-87854482 None:intergenic 30.0%
!! ATATCGTTTGAGTTGCTTAA+AGG + chr3_2:87854618-87854637 None:intergenic 30.0%
ATTCTTGCAAAATTTGATGC+AGG + chr3_2:87854656-87854675 None:intergenic 30.0%
TTGTCAGTGATTATGATTAG+CGG - chr3_2:87854741-87854760 Msa0434830:intron 30.0%
! ATCATTAGACAGGACAATTT+TGG + chr3_2:87854797-87854816 None:intergenic 30.0%
TAATGATTGTTTGGGAACTT+AGG - chr3_2:87854810-87854829 Msa0434830:intron 30.0%
ACAATTTAGTCGTGTCTAAA+AGG - chr3_2:87854857-87854876 Msa0434830:intron 30.0%
GATGCAAATATTTGGCAAAA+TGG + chr3_2:87854883-87854902 None:intergenic 30.0%
ATTTGCATCCCAAATTAACT+AGG - chr3_2:87854894-87854913 Msa0434830:intron 30.0%
!! AGTTTCTTGTGTGTTTTTGA+AGG - chr3_2:87854984-87855003 Msa0434830:CDS 30.0%
! AGAAAATTGAAGACTTTTGG+GGG + chr3_2:87855019-87855038 None:intergenic 30.0%
! CAGAAAATTGAAGACTTTTG+GGG + chr3_2:87855020-87855039 None:intergenic 30.0%
! CCAGAAAATTGAAGACTTTT+GGG + chr3_2:87855021-87855040 None:intergenic 30.0%
! ACCAGAAAATTGAAGACTTT+TGG + chr3_2:87855022-87855041 None:intergenic 30.0%
ATCATGTCTGATCAAGTAAA+TGG + chr3_2:87855576-87855595 None:intergenic 30.0%
ACACAAAATAAGGGATTAAG+AGG - chr3_2:87855604-87855623 Msa0434830:five_prime_UTR 30.0%
ATATATAGAGGAGCTTAAAG+AGG - chr3_2:87855655-87855674 Msa0434830:five_prime_UTR 30.0%
AAAATGTGAGAAGAGGAAAG+GGG + chr3_2:87849568-87849587 Msa0434820:CDS 35.0%
GAAAATGTGAGAAGAGGAAA+GGG + chr3_2:87849569-87849588 Msa0434820:CDS 35.0%
AGAAAATGTGAGAAGAGGAA+AGG + chr3_2:87849570-87849589 Msa0434820:CDS 35.0%
!! TTTTGTTACCGTTTTTCAGC+AGG - chr3_2:87849724-87849743 Msa0434830:three_prime_UTR 35.0%
! TGTTCTTTTAGCCAATCCTT+TGG + chr3_2:87849751-87849770 Msa0434820:CDS 35.0%
GAAAAAGATAAACAGAGCGA+AGG + chr3_2:87849828-87849847 Msa0434820:intron 35.0%
ATGTCTTGCTAATTAGGGTT+TGG - chr3_2:87850123-87850142 Msa0434830:intron 35.0%
TAGGGTTTGGATGACATAAT+AGG - chr3_2:87850136-87850155 Msa0434830:intron 35.0%
CTGATGAGTGATTCGTTATA+TGG - chr3_2:87850228-87850247 Msa0434830:intron 35.0%
!! GCTAACATTCTTTTGGGAAA+AGG + chr3_2:87850485-87850504 Msa0434820:CDS 35.0%
! CACTTGAGCTAACATTCTTT+TGG + chr3_2:87850492-87850511 Msa0434820:CDS 35.0%
TGCAAAGCAAATGATTGAAC+TGG - chr3_2:87850812-87850831 Msa0434830:three_prime_UTR 35.0%
ATATGATGTAGGACAAAGGT+AGG - chr3_2:87851146-87851165 Msa0434830:intron 35.0%
TTAACACAAGATACAACACG+TGG - chr3_2:87851205-87851224 Msa0434830:intron 35.0%
TAACACAAGATACAACACGT+GGG - chr3_2:87851206-87851225 Msa0434830:intron 35.0%
! CATTTTCTCTCTTCTTCTCT+TGG + chr3_2:87851281-87851300 Msa0434820:three_prime_UTR 35.0%
GAAACGAGTGAGAAATGAAA+TGG - chr3_2:87851300-87851319 Msa0434830:intron 35.0%
GAGTGAGAAATGAAATGGTA+AGG - chr3_2:87851305-87851324 Msa0434830:intron 35.0%
AGAAATGAAATGGTAAGGAG+TGG - chr3_2:87851310-87851329 Msa0434830:intron 35.0%
GTAAGGAGTGGCTATATATA+AGG - chr3_2:87851322-87851341 Msa0434830:intron 35.0%
AGGAGAAAAATTTAGAAGGG+AGG - chr3_2:87851342-87851361 Msa0434830:intron 35.0%
GGAGAAAAATTTAGAAGGGA+GGG - chr3_2:87851343-87851362 Msa0434830:intron 35.0%
ATAAAACTGATTAGAGCACG+TGG - chr3_2:87851409-87851428 Msa0434830:intron 35.0%
GGTCTCACTAATTATCATTG+TGG + chr3_2:87851449-87851468 None:intergenic 35.0%
! GAGACCGAAATTTCTTTTGA+AGG - chr3_2:87851463-87851482 Msa0434830:intron 35.0%
TTGGTAAAGAGAACGAAGTT+GGG + chr3_2:87851725-87851744 None:intergenic 35.0%
ATTGGTAAAGAGAACGAAGT+TGG + chr3_2:87851726-87851745 None:intergenic 35.0%
! AGCTTTGTCCTACATCATAT+TGG + chr3_2:87851744-87851763 None:intergenic 35.0%
ATATGATGTAGGACAAAGCT+AGG - chr3_2:87851744-87851763 Msa0434830:intron 35.0%
TTAACACAAGATACAACACG+TGG - chr3_2:87851205-87851224 Msa0434830:intron 35.0%
TAACACAAGATACAACACGT+GGG - chr3_2:87851206-87851225 Msa0434830:intron 35.0%
! CGTTTCATTTTCTCTCTTCT+TGG + chr3_2:87851286-87851305 Msa0434820:three_prime_UTR 35.0%
GAAACGAGTGAGAAATGAAA+TGG - chr3_2:87851300-87851319 Msa0434830:intron 35.0%
GAGTGAGAAATGAAATGGTA+AGG - chr3_2:87851305-87851324 Msa0434830:intron 35.0%
AGAAATGAAATGGTAAGGAG+TGG - chr3_2:87851310-87851329 Msa0434830:intron 35.0%
GTAAGGAGTGGCTATATATA+AGG - chr3_2:87851322-87851341 Msa0434830:intron 35.0%
GGTCTCACTAATTATCATTG+TGG + chr3_2:87851449-87851468 None:intergenic 35.0%
CGAATTATCACAACCATGAA+GGG + chr3_2:87852180-87852199 None:intergenic 35.0%
AATACACGAAGTTAGCACAT+AGG + chr3_2:87852324-87852343 None:intergenic 35.0%
CCAAATTTCGTGACATATGA+CGG - chr3_2:87852427-87852446 Msa0434830:intron 35.0%
ACATGAGAAATATGGGAAAC+AGG + chr3_2:87852459-87852478 None:intergenic 35.0%
GATCTGCACATGAGAAATAT+GGG + chr3_2:87852466-87852485 None:intergenic 35.0%
TGATCTGCACATGAGAAATA+TGG + chr3_2:87852467-87852486 None:intergenic 35.0%
AACCAACATTGAACTTGCAT+CGG - chr3_2:87852516-87852535 Msa0434830:CDS 35.0%
TATCCTGGACACTATTATTG+AGG + chr3_2:87852554-87852573 None:intergenic 35.0%
AATAGTGTCCAGGATAATTG+GGG - chr3_2:87852558-87852577 Msa0434830:intron 35.0%
! CATTTGATAATCTCGGTTAG+AGG + chr3_2:87852727-87852746 None:intergenic 35.0%
CAAAATAGCAGATGCTGTAT+CGG - chr3_2:87852788-87852807 Msa0434830:intron 35.0%
!! ACCTGTTCAACTTTTTGAAG+TGG - chr3_2:87852879-87852898 Msa0434830:intron 35.0%
TCCACTTCAAAAAGTTGAAC+AGG + chr3_2:87852883-87852902 None:intergenic 35.0%
!!! GTTCAACTTTTTGAAGTGGA+AGG - chr3_2:87852883-87852902 Msa0434830:intron 35.0%
AATAATGCCAATCGTCAGTT+CGG + chr3_2:87853201-87853220 None:intergenic 35.0%
! ATCAAAATATGCTTTTGCCC+TGG - chr3_2:87853307-87853326 Msa0434830:intron 35.0%
GCAAGTAGATAACTTAACCA+GGG + chr3_2:87853327-87853346 None:intergenic 35.0%
AGCAAGTAGATAACTTAACC+AGG + chr3_2:87853328-87853347 None:intergenic 35.0%
AAGAACTTAAAGAATGGGGT+TGG + chr3_2:87853550-87853569 None:intergenic 35.0%
!! ACGTGTTTTTGAACTGGTTT+GGG - chr3_2:87853617-87853636 Msa0434830:intron 35.0%
TCATCAAGAAGGCGAAAATA+AGG - chr3_2:87853791-87853810 Msa0434830:intron 35.0%
GTTCGAATAACTTAGGTCAA+AGG - chr3_2:87853813-87853832 Msa0434830:intron 35.0%
ATTGGCAAAAAATGCTAGAC+GGG + chr3_2:87853887-87853906 None:intergenic 35.0%
CTGTACAATTGCTACACTAT+TGG + chr3_2:87853905-87853924 None:intergenic 35.0%
CAATAGTGTAGCAATTGTAC+AGG - chr3_2:87853903-87853922 Msa0434830:intron 35.0%
! CTGATTCGTAGAATAGAACA+TGG + chr3_2:87853982-87854001 None:intergenic 35.0%
CATGTTCTATTCTACGAATC+AGG - chr3_2:87853980-87853999 Msa0434830:intron 35.0%
ATAATAAGGAGTCGGTCATT+CGG + chr3_2:87854007-87854026 None:intergenic 35.0%
TCAAAGTTCTGCGCATAATA+AGG + chr3_2:87854021-87854040 None:intergenic 35.0%
ATTATGCGCAGAACTTTGAT+CGG - chr3_2:87854022-87854041 Msa0434830:intron 35.0%
TTACAAACCAATCCAGATGA+CGG + chr3_2:87854092-87854111 None:intergenic 35.0%
AGCCAATAGATGGTAAAAGT+TGG - chr3_2:87854216-87854235 Msa0434830:intron 35.0%
! GACCAACTTTTACCATCTAT+TGG + chr3_2:87854221-87854240 None:intergenic 35.0%
! ATAGATGGTAAAAGTTGGTC+TGG - chr3_2:87854221-87854240 Msa0434830:intron 35.0%
ACTTATTCATGAAGTCTGCT+AGG - chr3_2:87854291-87854310 Msa0434830:intron 35.0%
CAATTGTGTCTTAACTCACA+CGG + chr3_2:87854321-87854340 None:intergenic 35.0%
TAAAATTCTCAGCAGTTGCA+TGG - chr3_2:87854346-87854365 Msa0434830:intron 35.0%
ATGGAAAAGCTTCAAATTGC+AGG + chr3_2:87854440-87854459 None:intergenic 35.0%
TGCAAAATTTGATGCAGGAA+TGG + chr3_2:87854651-87854670 None:intergenic 35.0%
!!! AGGACAATTTTGGAACCTTT+TGG + chr3_2:87854787-87854806 None:intergenic 35.0%
TGTCCTGTCTAATGATTGTT+TGG - chr3_2:87854801-87854820 Msa0434830:intron 35.0%
GTCCTGTCTAATGATTGTTT+GGG - chr3_2:87854802-87854821 Msa0434830:intron 35.0%
TTCCCAAACAATCATTAGAC+AGG + chr3_2:87854807-87854826 None:intergenic 35.0%
! TGTAACAGCACATTTTAGAC+AGG + chr3_2:87854840-87854859 None:intergenic 35.0%
! CCCAAAAGTCTTCAATTTTC+TGG - chr3_2:87855018-87855037 Msa0434830:CDS 35.0%
ATAGTTATCAGAAGCTAACG+CGG + chr3_2:87855076-87855095 None:intergenic 35.0%
CGCAACAATTGAAAAGGAAT+GGG + chr3_2:87855478-87855497 None:intergenic 35.0%
ACGCAACAATTGAAAAGGAA+TGG + chr3_2:87855479-87855498 None:intergenic 35.0%
! ATTCCTTTTCAATTGTTGCG+TGG - chr3_2:87855478-87855497 Msa0434830:CDS 35.0%
ATTGCTTGCCTTATCTTTCG+CGG + chr3_2:87849427-87849446 Msa0434820:five_prime_UTR 40.0%
CTTACAGATGCCAATGTCAA+TGG + chr3_2:87849647-87849666 Msa0434820:CDS 40.0%
CGAAAGAATTCCTATCCTCT+GGG + chr3_2:87850024-87850043 Msa0434820:intron 40.0%
ACGAAAGAATTCCTATCCTC+TGG + chr3_2:87850025-87850044 Msa0434820:intron 40.0%
ACAAAGACAAACCTCAACTC+CGG + chr3_2:87850065-87850084 Msa0434820:intron 40.0%
AACACATAGATGCTGGAAAG+TGG + chr3_2:87850683-87850702 Msa0434820:CDS 40.0%
TGGACACTAATTAAGGCAGT+AGG + chr3_2:87850714-87850733 Msa0434820:CDS 40.0%
TGAAGATACTTGGAACCACA+GGG + chr3_2:87850778-87850797 Msa0434820:CDS 40.0%
!! TTTCCAGCATCTAGTTCTTC+AGG - chr3_2:87851023-87851042 Msa0434830:intron 40.0%
CATGCCGAGCATATTAACTT+TGG - chr3_2:87851058-87851077 Msa0434830:intron 40.0%
!! TTTCCAGCATCTAGTTCTTC+AGG - chr3_2:87851023-87851042 Msa0434830:intron 40.0%
ATTAGAGCATGTGGTAACAG+TGG - chr3_2:87852011-87852030 Msa0434830:intron 40.0%
TTAGAGCATGTGGTAACAGT+GGG - chr3_2:87852012-87852031 Msa0434830:intron 40.0%
! GAGACCGGAATTTCTTTTGA+AGG - chr3_2:87852056-87852075 Msa0434830:intron 40.0%
GCGAATTATCACAACCATGA+AGG + chr3_2:87852181-87852200 None:intergenic 40.0%
TCATGGTTGTGATAATTCGC+TGG - chr3_2:87852181-87852200 Msa0434830:CDS 40.0%
! GAGAGTGCAGATAATGCTTT+AGG + chr3_2:87852353-87852372 None:intergenic 40.0%
!! AGCATGCATTTTGGCATCAA+AGG + chr3_2:87852402-87852421 None:intergenic 40.0%
CCGTCATATGTCACGAAATT+TGG + chr3_2:87852430-87852449 None:intergenic 40.0%
ATCCGATGCAAGTTCAATGT+TGG + chr3_2:87852521-87852540 None:intergenic 40.0%
ACATTGAACTTGCATCGGAT+AGG - chr3_2:87852521-87852540 Msa0434830:CDS 40.0%
TCTCCTCAATAATAGTGTCC+AGG - chr3_2:87852548-87852567 Msa0434830:intron 40.0%
CTAGTATACCCCAATTATCC+TGG + chr3_2:87852569-87852588 None:intergenic 40.0%
CAGGATAATTGGGGTATACT+AGG - chr3_2:87852567-87852586 Msa0434830:intron 40.0%
CGCAAAAAGGACAACAATAC+AGG + chr3_2:87852643-87852662 None:intergenic 40.0%
GAATAAAGGGAGACGCAAAA+AGG + chr3_2:87852656-87852675 None:intergenic 40.0%
TCTCTCGACAAATTTGAGCA+AGG - chr3_2:87852822-87852841 Msa0434830:intron 40.0%
GTCATTTAAGTACGTGCTTC+TGG - chr3_2:87852920-87852939 Msa0434830:intron 40.0%
TGATATTCAGCTAAGTGACG+TGG + chr3_2:87853148-87853167 None:intergenic 40.0%
TCTTCATCTGGATAATCCTC+TGG - chr3_2:87853241-87853260 Msa0434830:intron 40.0%
!! GAGTAGACGTGTTTTTGAAC+TGG - chr3_2:87853611-87853630 Msa0434830:intron 40.0%
!! GACGTGTTTTTGAACTGGTT+TGG - chr3_2:87853616-87853635 Msa0434830:intron 40.0%
!!! TGTTTTTGAACTGGTTTGGG+TGG - chr3_2:87853620-87853639 Msa0434830:intron 40.0%
TTGGCAAAAAATGCTAGACG+GGG + chr3_2:87853886-87853905 None:intergenic 40.0%
ATTGTACAGGTGACAACACA+TGG - chr3_2:87853916-87853935 Msa0434830:intron 40.0%
TTCTGCGCATAATAAGGAGT+CGG + chr3_2:87854015-87854034 None:intergenic 40.0%
TTATGCGCAGAACTTTGATC+GGG - chr3_2:87854023-87854042 Msa0434830:intron 40.0%
!! GGATTGGTTTGTAATGACCT+AGG - chr3_2:87854098-87854117 Msa0434830:intron 40.0%
ATCATTCAAGAGGCCGAAAT+GGG - chr3_2:87854154-87854173 Msa0434830:intron 40.0%
ACATGTGTGAAGCCAATAGA+TGG - chr3_2:87854206-87854225 Msa0434830:intron 40.0%
CTGGCCAATCACTGTAAAAT+TGG - chr3_2:87854240-87854259 Msa0434830:intron 40.0%
GAATACTGAATTGGATAGCG+TGG - chr3_2:87854262-87854281 Msa0434830:intron 40.0%
TTTCTTACCACAGAAGAGCA+CGG + chr3_2:87854417-87854436 None:intergenic 40.0%
! TCTGGTTAAGGATTTGGCTT+TGG - chr3_2:87854490-87854509 Msa0434830:intron 40.0%
TGACTTTGCAGAAGTCTTAG+AGG + chr3_2:87854576-87854595 None:intergenic 40.0%
!!! TTCTGGTCTACTGCTGTTTT+TGG - chr3_2:87855035-87855054 Msa0434830:CDS 40.0%
!!! TCTGGTCTACTGCTGTTTTT+GGG - chr3_2:87855036-87855055 Msa0434830:CDS 40.0%
!! GCTTTGGTTTGATTCTAGAC+TGG + chr3_2:87855271-87855290 None:intergenic 40.0%
AACAATGCTCGTGAAACTTC+TGG + chr3_2:87855315-87855334 None:intergenic 40.0%
AGGAATGGGATTTCCTTCAA+AGG + chr3_2:87855464-87855483 None:intergenic 40.0%
CAGTATGTAACAAGTCTGGA+AGG - chr3_2:87855517-87855536 Msa0434830:CDS 40.0%
GGATTAAGAGGTTTGTGAAG+AGG - chr3_2:87855616-87855635 Msa0434830:five_prime_UTR 40.0%
TAGAGGAGCTTAAAGAGGTT+TGG - chr3_2:87855660-87855679 Msa0434830:five_prime_UTR 40.0%
AGAGGAGCTTAAAGAGGTTT+GGG - chr3_2:87855661-87855680 Msa0434830:five_prime_UTR 40.0%
CATAGCAGGAGTTAGGACTT+AGG - chr3_2:87849363-87849382 Msa0434830:three_prime_UTR 45.0%
TTCGCGGTGTGTTTCTCTTT+CGG + chr3_2:87849411-87849430 Msa0434820:five_prime_UTR 45.0%
GAAACACACCGCGAAAGATA+AGG - chr3_2:87849416-87849435 Msa0434830:three_prime_UTR 45.0%
GAAACTGTAGCTGCTGGTAA+CGG + chr3_2:87849469-87849488 Msa0434820:CDS 45.0%
!!! AAGGTTACGTTTTGGAGGGA+GGG + chr3_2:87849545-87849564 Msa0434820:CDS 45.0%
! GAAAGGGGAAGGTTACGTTT+TGG + chr3_2:87849553-87849572 Msa0434820:CDS 45.0%
GCGAGAGAAAATGTGAGAAG+AGG + chr3_2:87849575-87849594 Msa0434820:CDS 45.0%
ACAGATGCCAATGTCAATGG+CGG + chr3_2:87849644-87849663 Msa0434820:CDS 45.0%
CCTTTGGTCCTGCTGAAAAA+CGG + chr3_2:87849735-87849754 Msa0434820:CDS 45.0%
TTTCAGCAGGACCAAAGGAT+TGG - chr3_2:87849737-87849756 Msa0434830:three_prime_UTR 45.0%
GACAGGAGCAAGTAGAAACT+TGG + chr3_2:87849788-87849807 Msa0434820:CDS 45.0%
GTAGCTTTCCAAGCTAACAC+CGG - chr3_2:87850043-87850062 Msa0434830:intron 45.0%
TTAGACGAGAGAAGCTGAGA+AGG - chr3_2:87850306-87850325 Msa0434830:intron 45.0%
AATCCCTACCCTGAATTGAG+TGG - chr3_2:87850376-87850395 Msa0434830:intron 45.0%
ATCCCTACCCTGAATTGAGT+GGG - chr3_2:87850377-87850396 Msa0434830:intron 45.0%
ATCAGTCCCCACTCAATTCA+GGG + chr3_2:87850387-87850406 Msa0434820:CDS 45.0%
TATCAGTCCCCACTCAATTC+AGG + chr3_2:87850388-87850407 Msa0434820:CDS 45.0%
ATGCACAGGTGTGCACATTT+CGG - chr3_2:87850567-87850586 Msa0434830:three_prime_UTR 45.0%
ATCCTTCTTTCCAAGCAAGG+AGG + chr3_2:87850612-87850631 Msa0434820:CDS 45.0%
AGGATCCTTCTTTCCAAGCA+AGG + chr3_2:87850615-87850634 Msa0434820:CDS 45.0%
AGGCTACAACACATAGATGC+TGG + chr3_2:87850690-87850709 Msa0434820:CDS 45.0%
CACTAATTAAGGCAGTAGGC+AGG + chr3_2:87850710-87850729 Msa0434820:CDS 45.0%
GTGAAGATACTTGGAACCAC+AGG + chr3_2:87850779-87850798 Msa0434820:CDS 45.0%
TCACCTGAAGAACTAGATGC+TGG + chr3_2:87851029-87851048 Msa0434820:exon 45.0%
GGTTATCCTTCTCCAGTAGA+AGG - chr3_2:87851227-87851246 Msa0434830:intron 45.0%
TATCCTTCTCCAGTAGAAGG+AGG - chr3_2:87851230-87851249 Msa0434830:intron 45.0%
TTGTGACTTCCTCCTTCTAC+TGG + chr3_2:87851242-87851261 Msa0434820:three_prime_UTR 45.0%
GAGAACAGGGACAAAACACT+TGG + chr3_2:87851385-87851404 Msa0434820:three_prime_UTR 45.0%
ATTAGAGCACGTGGTAACAG+TGG - chr3_2:87851418-87851437 Msa0434830:intron 45.0%
TTAGAGCACGTGGTAACAGT+GGG - chr3_2:87851419-87851438 Msa0434830:intron 45.0%
TCACCTGAAGAACTAGATGC+TGG + chr3_2:87851029-87851048 Msa0434820:exon 45.0%
GGTTATCCTTCTCCAGTAGA+AGG - chr3_2:87851227-87851246 Msa0434830:intron 45.0%
TATCCTTCTCCAGTAGAAGG+AGG - chr3_2:87851230-87851249 Msa0434830:intron 45.0%
TTGTGACTTCCTCCTTCTAC+TGG + chr3_2:87851242-87851261 Msa0434820:three_prime_UTR 45.0%
GAGAACAGGGACAAAACACT+TGG + chr3_2:87851385-87851404 Msa0434820:three_prime_UTR 45.0%
AGATCATTCGCCTCTATCAG+TGG - chr3_2:87852481-87852500 Msa0434830:intron 45.0%
GATCATTCGCCTCTATCAGT+GGG - chr3_2:87852482-87852501 Msa0434830:intron 45.0%
AAGTGAGGTGGCTCAATTCA+GGG + chr3_2:87853177-87853196 None:intergenic 45.0%
TAAGTGAGGTGGCTCAATTC+AGG + chr3_2:87853178-87853197 None:intergenic 45.0%
AATCGTCAGTTCGGTAAGTG+AGG + chr3_2:87853192-87853211 None:intergenic 45.0%
TCACTTACCGAACTGACGAT+TGG - chr3_2:87853191-87853210 Msa0434830:intron 45.0%
AAAAATTGCGCTCTCACCAG+AGG + chr3_2:87853260-87853279 None:intergenic 45.0%
! TTGTACTTGGTGGAAGCTTC+TGG + chr3_2:87854053-87854072 None:intergenic 45.0%
GTAATGACCTAGGCAAGTTG+CGG - chr3_2:87854108-87854127 Msa0434830:intron 45.0%
GATCATTCAAGAGGCCGAAA+TGG - chr3_2:87854153-87854172 Msa0434830:intron 45.0%
TGCCACTCTGGTTAAGGATT+TGG - chr3_2:87854484-87854503 Msa0434830:intron 45.0%
AGCCAAATCCTTAACCAGAG+TGG + chr3_2:87854489-87854508 None:intergenic 45.0%
CACTATTCTGCAAGCAGCTA+AGG + chr3_2:87854546-87854565 None:intergenic 45.0%
AAAGGACAGCGATGTCTTTG+AGG + chr3_2:87854600-87854619 None:intergenic 45.0%
CAGTGATTATGATTAGCGGC+TGG - chr3_2:87854745-87854764 Msa0434830:intron 45.0%
! CAGACTGGCTGTAATCCAAA+AGG - chr3_2:87854769-87854788 Msa0434830:intron 45.0%
TTATCAGAAGCTAACGCGGA+TGG + chr3_2:87855072-87855091 None:intergenic 45.0%
! ACCAAAGCGTTCTAACTGCA+AGG - chr3_2:87855283-87855302 Msa0434830:intron 45.0%
TCCTTGCAGTTAGAACGCTT+TGG + chr3_2:87855287-87855306 None:intergenic 45.0%
TCAAAGGTCAGCTTGCCAAA+CGG + chr3_2:87855448-87855467 None:intergenic 45.0%
TTTGGCAAGCTGACCTTTGA+AGG - chr3_2:87855448-87855467 Msa0434830:CDS 45.0%
GGTCCACGCAACAATTGAAA+AGG + chr3_2:87855484-87855503 None:intergenic 45.0%
GGGTCAGTATGTAACAAGTC+TGG - chr3_2:87855513-87855532 Msa0434830:CDS 45.0%
! AAGTCTGGAAGGTTTAGCTC+TGG - chr3_2:87855528-87855547 Msa0434830:CDS 45.0%
GAGGAGCTTAAAGAGGTTTG+GGG - chr3_2:87855662-87855681 Msa0434830:five_prime_UTR 45.0%
! AGCTTAAAGAGGTTTGGGGT+TGG - chr3_2:87855666-87855685 Msa0434830:five_prime_UTR 45.0%
!!! TTATCATTATTTATTTTTTT+AGG - chr3_2:87850258-87850277 Msa0434830:intron 5.0%
! GCAAAGGCATAGCAGGAGTT+AGG - chr3_2:87849356-87849375 Msa0434830:three_prime_UTR 50.0%
! GGTGTGTTTCTCTTTCGGGT+CGG + chr3_2:87849406-87849425 Msa0434820:five_prime_UTR 50.0%
TCGCGGTGTGTTTCTCTTTC+GGG + chr3_2:87849410-87849429 Msa0434820:five_prime_UTR 50.0%
AGAGCAGAAACTGTAGCTGC+TGG + chr3_2:87849475-87849494 Msa0434820:CDS 50.0%
!!! GAAGGTTACGTTTTGGAGGG+AGG + chr3_2:87849546-87849565 Msa0434820:CDS 50.0%
!! GGGGAAGGTTACGTTTTGGA+GGG + chr3_2:87849549-87849568 Msa0434820:CDS 50.0%
! AGGGGAAGGTTACGTTTTGG+AGG + chr3_2:87849550-87849569 Msa0434820:CDS 50.0%
TGTGAGAAGAGGAAAGGGGA+AGG + chr3_2:87849564-87849583 Msa0434820:CDS 50.0%
!! CCGTTTTTCAGCAGGACCAA+AGG - chr3_2:87849732-87849751 Msa0434830:three_prime_UTR 50.0%
! GTTTCGGTTCCTTTTCCCAG+CGG - chr3_2:87849922-87849941 Msa0434830:intron 50.0%
! TTCCTTTTCCCAGCGGAAAC+TGG - chr3_2:87849929-87849948 Msa0434830:intron 50.0%
AAGTAGCACCAGTTTCCGCT+GGG + chr3_2:87849940-87849959 Msa0434820:intron 50.0%
TAAGTAGCACCAGTTTCCGC+TGG + chr3_2:87849941-87849960 Msa0434820:intron 50.0%
AGCTATTCAGATCTGCTGCC+AGG - chr3_2:87849990-87850009 Msa0434830:intron 50.0%
GCTATTCAGATCTGCTGCCA+GGG - chr3_2:87849991-87850010 Msa0434830:intron 50.0%
CGAGAGAAGCTGAGAAGGTT+TGG - chr3_2:87850311-87850330 Msa0434830:intron 50.0%
TCCCTACCCTGAATTGAGTG+GGG - chr3_2:87850378-87850397 Msa0434830:intron 50.0%
TCCCCACTCAATTCAGGGTA+GGG + chr3_2:87850382-87850401 Msa0434820:intron 50.0%
AAGAATGCAGCCTCCTTGCT+TGG - chr3_2:87850599-87850618 Msa0434830:three_prime_UTR 50.0%
AGCCTCCTTGCTTGGAAAGA+AGG - chr3_2:87850607-87850626 Msa0434830:three_prime_UTR 50.0%
GCTTCGGCTTCTAACTTCAC+AGG + chr3_2:87850635-87850654 Msa0434820:CDS 50.0%
CTTCCTCCTTCTACTGGAGA+AGG + chr3_2:87851236-87851255 Msa0434820:three_prime_UTR 50.0%
CTTCCTCCTTCTACTGGAGA+AGG + chr3_2:87851236-87851255 Msa0434820:three_prime_UTR 50.0%
ATTTGCCAGCCCACTGATAG+AGG + chr3_2:87852494-87852513 None:intergenic 50.0%
TTGGCAATACTGCCCTAACG+TGG - chr3_2:87853035-87853054 Msa0434830:intron 50.0%
CAATACTGCCCTAACGTGGA+AGG - chr3_2:87853039-87853058 Msa0434830:intron 50.0%
AGTGCCAACCTTCCACGTTA+GGG + chr3_2:87853050-87853069 None:intergenic 50.0%
AAGTGCCAACCTTCCACGTT+AGG + chr3_2:87853051-87853070 None:intergenic 50.0%
TAACGTGGAAGGTTGGCACT+TGG - chr3_2:87853050-87853069 Msa0434830:intron 50.0%
! ATGCTGTCGCTTGTACTTGG+TGG + chr3_2:87854063-87854082 None:intergenic 50.0%
ACCAAGTACAAGCGACAGCA+TGG - chr3_2:87854062-87854081 Msa0434830:intron 50.0%
! ACCATGCTGTCGCTTGTACT+TGG + chr3_2:87854066-87854085 None:intergenic 50.0%
TGGTGTTCCGTCATCTGGAT+TGG - chr3_2:87854082-87854101 Msa0434830:intron 50.0%
! CAGTTGCATGGCGTTGGATT+GGG - chr3_2:87854358-87854377 Msa0434830:intron 50.0%
! TGGATTGGGCGAGGTAGTAT+AGG - chr3_2:87854372-87854391 Msa0434830:CDS 50.0%
AGCACGGTCTGGATTCTAGA+AGG + chr3_2:87854401-87854420 None:intergenic 50.0%
TCTTATGTCAGCTGCCACTC+TGG - chr3_2:87854472-87854491 Msa0434830:intron 50.0%
GTGTCTACAAACCTGCACCT+AGG - chr3_2:87855199-87855218 Msa0434830:CDS 50.0%
GAAGCACAGGTTGTTCTCCT+AGG + chr3_2:87855219-87855238 None:intergenic 50.0%
ACCTGTGCTTCTCTGCCATT+CGG - chr3_2:87855228-87855247 Msa0434830:CDS 50.0%
GATGTTCTCAGTTCCCCGAA+TGG + chr3_2:87855246-87855265 None:intergenic 50.0%
!! TGATCCACTTGCTGCTTTGC+TGG + chr3_2:87855391-87855410 None:intergenic 50.0%
GCAAAGCAGCAAGTGGATCA+TGG - chr3_2:87855391-87855410 Msa0434830:CDS 50.0%
ACATACTGACCCTGTTCGAC+AGG + chr3_2:87855505-87855524 None:intergenic 50.0%
GCTTGCAAGACAACCAAGCA+TGG + chr3_2:87855554-87855573 None:intergenic 50.0%
!! GCTGCTGGTAACGGCATTGT+TGG + chr3_2:87849460-87849479 Msa0434820:CDS 55.0%
TGGAGGGAGGGAAAATTGCG+CGG + chr3_2:87849533-87849552 Msa0434820:CDS 55.0%
GATGCCAATGTCAATGGCGG+AGG + chr3_2:87849641-87849660 Msa0434820:CDS 55.0%
!! CTTTCACGAGAGGCATCGAC+AGG + chr3_2:87849805-87849824 Msa0434820:CDS 55.0%
AGAGCGAAGGCTTTCACGAG+AGG + chr3_2:87849815-87849834 Msa0434820:intron 55.0%
CACCAGTTTCCGCTGGGAAA+AGG + chr3_2:87849934-87849953 Msa0434820:intron 55.0%
!! ATCCTCTGGGACACAATCCC+TGG + chr3_2:87850011-87850030 Msa0434820:intron 55.0%
GGGATTGTGTCCCAGAGGAT+AGG - chr3_2:87850011-87850030 Msa0434830:intron 55.0%
! CCTCAACTCCGGTGTTAGCT+TGG + chr3_2:87850054-87850073 Msa0434820:intron 55.0%
CCAAGCTAACACCGGAGTTG+AGG - chr3_2:87850051-87850070 Msa0434830:intron 55.0%
GTCCCCACTCAATTCAGGGT+AGG + chr3_2:87850383-87850402 Msa0434820:intron 55.0%
CACTTGGCCACTTGTCGTAG+AGG + chr3_2:87851962-87851981 None:intergenic 55.0%
ATTCGCCTCTATCAGTGGGC+TGG - chr3_2:87852486-87852505 Msa0434830:intron 55.0%
ACTGCCCTAACGTGGAAGGT+TGG - chr3_2:87853043-87853062 Msa0434830:intron 55.0%
CGTCAGTTCGGTAAGTGAGG+TGG + chr3_2:87853189-87853208 None:intergenic 55.0%
CAGCATGGTGTTCCGTCATC+TGG - chr3_2:87854077-87854096 Msa0434830:intron 55.0%
ACAAGCTCCGCAACTTGCCT+AGG + chr3_2:87854118-87854137 None:intergenic 55.0%
AAGAGGCCGAAATGGGCATC+TGG - chr3_2:87854161-87854180 Msa0434830:intron 55.0%
AGAGGCCGAAATGGGCATCT+GGG - chr3_2:87854162-87854181 Msa0434830:intron 55.0%
GGAGACCCAGATGCCCATTT+CGG + chr3_2:87854170-87854189 None:intergenic 55.0%
TCTCAGCAGTTGCATGGCGT+TGG - chr3_2:87854352-87854371 Msa0434830:intron 55.0%
! GCAGTTGCATGGCGTTGGAT+TGG - chr3_2:87854357-87854376 Msa0434830:intron 55.0%
ATCCAGACCGTGCTCTTCTG+TGG - chr3_2:87854407-87854426 Msa0434830:CDS 55.0%
! TACCACAGAAGAGCACGGTC+TGG + chr3_2:87854412-87854431 None:intergenic 55.0%
GTCAGCTGCCACTCTGGTTA+AGG - chr3_2:87854478-87854497 Msa0434830:intron 55.0%
! TGATTAGCGGCTGGTCAGAC+TGG - chr3_2:87854754-87854773 Msa0434830:intron 55.0%
CAGGTTGTTCTCCTAGGTGC+AGG + chr3_2:87855213-87855232 None:intergenic 55.0%
CCTGTGCTTCTCTGCCATTC+GGG - chr3_2:87855229-87855248 Msa0434830:CDS 55.0%
CTGTGCTTCTCTGCCATTCG+GGG - chr3_2:87855230-87855249 Msa0434830:CDS 55.0%
!! ACTTGCTGCTTTGCTGGCAG+GGG + chr3_2:87855385-87855404 None:intergenic 55.0%
!! CACTTGCTGCTTTGCTGGCA+GGG + chr3_2:87855386-87855405 None:intergenic 55.0%
TTGCCAAACGGCTGCAGGAA+GGG + chr3_2:87855436-87855455 None:intergenic 55.0%
TTGCGTGGACCTGTCGAACA+GGG - chr3_2:87855493-87855512 Msa0434830:CDS 55.0%
!! GGTTTAGCTCTGGCCATGCT+TGG - chr3_2:87855538-87855557 Msa0434830:CDS 55.0%
GAGGGAAAATTGCGCGGTGG+CGG + chr3_2:87849527-87849546 Msa0434820:CDS 60.0%
AGGGAGGGAAAATTGCGCGG+TGG + chr3_2:87849530-87849549 Msa0434820:CDS 60.0%
! CCAATGTCAATGGCGGAGGC+AGG + chr3_2:87849637-87849656 Msa0434820:CDS 60.0%
CCTGCCTCCGCCATTGACAT+TGG - chr3_2:87849634-87849653 Msa0434830:three_prime_UTR 60.0%
TGCCAGGGATTGTGTCCCAG+AGG - chr3_2:87850006-87850025 Msa0434830:intron 60.0%
CACTTGGCCACTTGTCGCAG+AGG + chr3_2:87851369-87851388 Msa0434820:three_prime_UTR 60.0%
GGGAGAGCCTCTACGACAAG+TGG - chr3_2:87851952-87851971 Msa0434830:intron 60.0%
! CCCGAATGGCAGAGAAGCAC+AGG + chr3_2:87855232-87855251 None:intergenic 60.0%
!! CCACTTGCTGCTTTGCTGGC+AGG + chr3_2:87855387-87855406 None:intergenic 60.0%
CCTGCCAGCAAAGCAGCAAG+TGG - chr3_2:87855384-87855403 Msa0434830:CDS 60.0%
TAGCCCTTCCTGCAGCCGTT+TGG - chr3_2:87855430-87855449 Msa0434830:CDS 60.0%
CTTGCCAAACGGCTGCAGGA+AGG + chr3_2:87855437-87855456 None:intergenic 60.0%
TCAGCTTGCCAAACGGCTGC+AGG + chr3_2:87855441-87855460 None:intergenic 60.0%
GTTGCGTGGACCTGTCGAAC+AGG - chr3_2:87855492-87855511 Msa0434830:CDS 60.0%
! AAATTGCGCGGTGGCGGTGG+CGG + chr3_2:87849521-87849540 Msa0434820:CDS 65.0%
! GGAAAATTGCGCGGTGGCGG+TGG + chr3_2:87849524-87849543 Msa0434820:CDS 65.0%
! GCATGGCGTTGGATTGGGCG+AGG - chr3_2:87854363-87854382 Msa0434830:intron 65.0%
CGGCTGCAGGAAGGGCTATG+TGG + chr3_2:87855428-87855447 None:intergenic 65.0%
GGGAGGGCCTCTGCGACAAG+TGG - chr3_2:87851359-87851378 Msa0434830:intron 70.0%
!! TTGCGCGGTGGCGGTGGCGG+TGG + chr3_2:87849518-87849537 Msa0434820:CDS 80.0%
!! GGTGGCGGTGGCGGTGGCGG+TGG + chr3_2:87849512-87849531 Msa0434820:CDS 85.0%
!! CGCGGTGGCGGTGGCGGTGG+CGG + chr3_2:87849515-87849534 Msa0434820:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 87849351 87855689 87849351 ID=Msa0434830;Name=Msa0434830
chr3_2 mRNA 87849351 87855689 87849351 ID=Msa0434830-mRNA-1;Parent=Msa0434830;Name=Msa0434830-mRNA-1;_AED=0.21;_eAED=0.21;_QI=112|1|1|1|0.71|0.62|8|1159|227
chr3_2 exon 87849351 87849827 87849351 ID=Msa0434830-mRNA-1:exon:25721;Parent=Msa0434830-mRNA-1
chr3_2 exon 87850385 87851007 87850385 ID=Msa0434830-mRNA-1:exon:25720;Parent=Msa0434830-mRNA-1
chr3_2 exon 87852112 87852255 87852112 ID=Msa0434830-mRNA-1:exon:25719;Parent=Msa0434830-mRNA-1
chr3_2 exon 87852498 87852557 87852498 ID=Msa0434830-mRNA-1:exon:25718;Parent=Msa0434830-mRNA-1
chr3_2 exon 87854365 87854465 87854365 ID=Msa0434830-mRNA-1:exon:25717;Parent=Msa0434830-mRNA-1
chr3_2 exon 87854968 87855098 87854968 ID=Msa0434830-mRNA-1:exon:25716;Parent=Msa0434830-mRNA-1
chr3_2 exon 87855190 87855297 87855190 ID=Msa0434830-mRNA-1:exon:25715;Parent=Msa0434830-mRNA-1
chr3_2 exon 87855379 87855689 87855379 ID=Msa0434830-mRNA-1:exon:25714;Parent=Msa0434830-mRNA-1
chr3_2 five_prime_UTR 87855578 87855689 87855578 ID=Msa0434830-mRNA-1:five_prime_utr;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87855379 87855577 87855379 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87855190 87855297 87855190 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87854968 87855098 87854968 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87854365 87854465 87854365 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87852498 87852557 87852498 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 CDS 87852171 87852255 87852171 ID=Msa0434830-mRNA-1:cds;Parent=Msa0434830-mRNA-1
chr3_2 three_prime_UTR 87852112 87852170 87852112 ID=Msa0434830-mRNA-1:three_prime_utr;Parent=Msa0434830-mRNA-1
chr3_2 three_prime_UTR 87850385 87851007 87850385 ID=Msa0434830-mRNA-1:three_prime_utr;Parent=Msa0434830-mRNA-1
chr3_2 three_prime_UTR 87849351 87849827 87849351 ID=Msa0434830-mRNA-1:three_prime_utr;Parent=Msa0434830-mRNA-1
Gene Sequence

>Msa0434830

ATGCCGTTACCAGCAGCTACAGTTTCTGCTCTCAACTCTTTCTCATCCACCGCCACCGCCACCGCCACCGCGCAATTTTCCCTCCCTCCAAAACGTAACCTTCCCCTTTCCTCTTCTCACATTTTCTCTCGCAGAGACATAGCGTTACTCTCATTCTTTTCACTCTCTGCACCTGCCTCCGCCATTGACATTGGCATCTCAGGACCAAAGGATTGGCTAAAAGAACAAAAGAAGAAATCTTCCAAGTTTCTACTTGCTCCTGTCGATGCCTCTCGTGAAAGCCTTCGCTCTGTTTATCTTTTTCTCACGGAAACTGGTGCTACTTATACAGATGAAGATTTGCAGAAATTTCAGCAGCTATTCAGATCTGCTGCCAGGGATTGTGTCCCAGAGGATAGGAATTCTTTCGTAGCTTTCCAAGCTAACACCGGAGTTGAGGTGTGCACATTTCGGTTGATTGTGAAGAATGCAGCCTCCTTGCTTGGAAAGAAGGATCCTGTGAAGTTAGAAGCCGAAGCTTTGCTAGATAATCTTATAAGATCATTCGCCTCTATCAGTGGGCTGGCAAATGAAACCAACATTGAACTTGCATCGGATAGGAGCAAAATAGCAGATGCTGTATCGGATACAATATTATCTCTCGACAAATTTGAGCAAGGAATTAGGGATTGCCTCGAAATCTGA

Protein sequence

>Msa0434830

MPLPAATVSALNSFSSTATATATAQFSLPPKRNLPLSSSHIFSRRDIALLSFFSLSAPASAIDIGISGPKDWLKEQKKKSSKFLLAPVDASRESLRSVYLFLTETGATYTDEDLQKFQQLFRSAARDCVPEDRNSFVAFQANTGVEVCTFRLIVKNAASLLGKKDPVKLEAEALLDNLIRSFASISGLANETNIELASDRSKIADAVSDTILSLDKFEQGIRDCLEI*