Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206790 | XP_013464052.1 | 97.354 | 189 | 5 | 0 | 1 | 189 | 1 | 189 | 2.49e-134 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206790 | sp|Q852U6|RHY1A_ARATH | 60.000 | 50 | 20 | 0 | 137 | 186 | 198 | 247 | 3.09e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206790 | A0A072V8C4 | 97.354 | 189 | 5 | 0 | 1 | 189 | 1 | 189 | 1.19e-134 | 384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0206790 | 0.811218 | 7.813255e-51 | -8.615850e-47 |
| Msa0015120 | Msa0206790 | 0.817677 | 2.913218e-52 | -8.615850e-47 |
| Msa0017070 | Msa0206790 | 0.803186 | 3.931114e-49 | -8.615850e-47 |
| Msa0029850 | Msa0206790 | 0.831075 | 2.050234e-55 | -8.615850e-47 |
| Msa0032320 | Msa0206790 | 0.813542 | 2.428747e-51 | -8.615850e-47 |
| Msa0033980 | Msa0206790 | 0.810466 | 1.136510e-50 | -8.615850e-47 |
| Msa0036140 | Msa0206790 | 0.808392 | 3.167182e-50 | -8.615850e-47 |
| Msa0039330 | Msa0206790 | 0.815623 | 8.406222e-52 | -8.615850e-47 |
| Msa0040450 | Msa0206790 | 0.800528 | 1.381403e-48 | -8.615850e-47 |
| Msa0042550 | Msa0206790 | 0.815203 | 1.042401e-51 | -8.615850e-47 |
| Msa0048000 | Msa0206790 | 0.853578 | 2.178999e-61 | -8.615850e-47 |
| Msa0064290 | Msa0206790 | 0.814020 | 1.905991e-51 | -8.615850e-47 |
| Msa0069310 | Msa0206790 | 0.820977 | 5.157291e-53 | -8.615850e-47 |
| Msa0077180 | Msa0206790 | 0.815094 | 1.102234e-51 | -8.615850e-47 |
| Msa0077610 | Msa0206790 | 0.806272 | 8.914932e-50 | -8.615850e-47 |
| Msa0081930 | Msa0206790 | 0.808885 | 2.485294e-50 | -8.615850e-47 |
| Msa0085370 | Msa0206790 | 0.800211 | 1.603262e-48 | -8.615850e-47 |
| Msa0090100 | Msa0206790 | 0.813826 | 2.102230e-51 | -8.615850e-47 |
| Msa0095560 | Msa0206790 | 0.813176 | 2.921615e-51 | -8.615850e-47 |
| Msa0121380 | Msa0206790 | 0.801365 | 9.320954e-49 | -8.615850e-47 |
| Msa0124550 | Msa0206790 | 0.805877 | 1.079655e-49 | -8.615850e-47 |
| Msa0135420 | Msa0206790 | 0.808181 | 3.513607e-50 | -8.615850e-47 |
| Msa0137570 | Msa0206790 | 0.800268 | 1.561035e-48 | -8.615850e-47 |
| Msa0140860 | Msa0206790 | 0.838762 | 2.371437e-57 | -8.615850e-47 |
| Msa0143560 | Msa0206790 | 0.810743 | 9.905284e-51 | -8.615850e-47 |
| Msa0166870 | Msa0206790 | 0.800019 | 1.753891e-48 | -8.615850e-47 |
| Msa0169820 | Msa0206790 | 0.832569 | 8.773603e-56 | -8.615850e-47 |
| Msa0169860 | Msa0206790 | 0.807977 | 3.882268e-50 | -8.615850e-47 |
| Msa0170140 | Msa0206790 | 0.810925 | 9.045171e-51 | -8.615850e-47 |
| Msa0171120 | Msa0206790 | 0.803667 | 3.125366e-49 | -8.615850e-47 |
| Msa0178510 | Msa0206790 | 0.822788 | 1.963915e-53 | -8.615850e-47 |
| Msa0178930 | Msa0206790 | 0.806254 | 8.995416e-50 | -8.615850e-47 |
| Msa0187250 | Msa0206790 | 0.801776 | 7.675803e-49 | -8.615850e-47 |
| Msa0188830 | Msa0206790 | 0.823896 | 1.082225e-53 | -8.615850e-47 |
| Msa0191250 | Msa0206790 | 0.800313 | 1.527866e-48 | -8.615850e-47 |
| Msa0201070 | Msa0206790 | 0.815230 | 1.028128e-51 | -8.615850e-47 |
| Msa0206790 | Msa0212040 | 0.814226 | 1.716536e-51 | -8.615850e-47 |
| Msa0206790 | Msa0212990 | 0.806885 | 6.620020e-50 | -8.615850e-47 |
| Msa0206790 | Msa0213040 | 0.814749 | 1.314750e-51 | -8.615850e-47 |
| Msa0206790 | Msa0213520 | 0.806915 | 6.523894e-50 | -8.615850e-47 |
| Msa0206790 | Msa0217400 | 0.819861 | 9.297959e-53 | -8.615850e-47 |
| Msa0206790 | Msa0220580 | 0.805766 | 1.139095e-49 | -8.615850e-47 |
| Msa0206790 | Msa0223410 | -0.812323 | 4.491572e-51 | -8.615850e-47 |
| Msa0206790 | Msa0226530 | 0.808272 | 3.360273e-50 | -8.615850e-47 |
| Msa0206790 | Msa0243710 | 0.822102 | 2.834848e-53 | -8.615850e-47 |
| Msa0206790 | Msa0249560 | 0.861849 | 7.682295e-64 | -8.615850e-47 |
| Msa0206790 | Msa0252540 | 0.809509 | 1.826948e-50 | -8.615850e-47 |
| Msa0206790 | Msa0253340 | 0.808713 | 2.705686e-50 | -8.615850e-47 |
| Msa0206790 | Msa0258760 | 0.801091 | 1.060281e-48 | -8.615850e-47 |
| Msa0206790 | Msa0260810 | 0.864480 | 1.179945e-64 | -8.615850e-47 |
| Msa0206790 | Msa0265380 | 0.826459 | 2.682263e-54 | -8.615850e-47 |
| Msa0206790 | Msa0268090 | 0.840545 | 8.153940e-58 | -8.615850e-47 |
| Msa0206790 | Msa0270100 | 0.823851 | 1.108420e-53 | -8.615850e-47 |
| Msa0206790 | Msa0280570 | 0.812350 | 4.431863e-51 | -8.615850e-47 |
| Msa0206790 | Msa0282250 | 0.819709 | 1.007444e-52 | -8.615850e-47 |
| Msa0206790 | Msa0287650 | 0.803604 | 3.220721e-49 | -8.615850e-47 |
| Msa0206790 | Msa0288100 | 0.852256 | 5.202776e-61 | -8.615850e-47 |
| Msa0206790 | Msa0291400 | 0.807570 | 4.739232e-50 | -8.615850e-47 |
| Msa0206790 | Msa0292120 | 0.824615 | 7.334043e-54 | -8.615850e-47 |
| Msa0206790 | Msa0292170 | 0.821440 | 4.032773e-53 | -8.615850e-47 |
| Msa0206790 | Msa0296560 | 0.803341 | 3.651451e-49 | -8.615850e-47 |
| Msa0206790 | Msa0297960 | 0.820721 | 5.907067e-53 | -8.615850e-47 |
| Msa0206790 | Msa0303360 | 0.820245 | 7.595748e-53 | -8.615850e-47 |
| Msa0206790 | Msa0306210 | -0.825498 | 4.537182e-54 | -8.615850e-47 |
| Msa0206790 | Msa0317510 | 0.802840 | 4.634025e-49 | -8.615850e-47 |
| Msa0206790 | Msa0326520 | 0.930274 | 2.079508e-93 | -8.615850e-47 |
| Msa0206790 | Msa0330340 | 0.805609 | 1.228904e-49 | -8.615850e-47 |
| Msa0206790 | Msa0333720 | -0.804636 | 1.964453e-49 | -8.615850e-47 |
| Msa0206790 | Msa0335040 | 0.815482 | 9.039818e-52 | -8.615850e-47 |
| Msa0206790 | Msa0340170 | 0.809568 | 1.773958e-50 | -8.615850e-47 |
| Msa0206790 | Msa0344690 | -0.834632 | 2.678818e-56 | -8.615850e-47 |
| Msa0206790 | Msa0363680 | 0.815025 | 1.142263e-51 | -8.615850e-47 |
| Msa0206790 | Msa0369440 | 0.822177 | 2.723500e-53 | -8.615850e-47 |
| Msa0206790 | Msa0376590 | 0.832769 | 7.824048e-56 | -8.615850e-47 |
| Msa0206790 | Msa0379640 | 0.803895 | 2.801899e-49 | -8.615850e-47 |
| Msa0206790 | Msa0381600 | -0.817715 | 2.855377e-52 | -8.615850e-47 |
| Msa0206790 | Msa0389340 | 0.839395 | 1.626096e-57 | -8.615850e-47 |
| Msa0206790 | Msa0392040 | -0.813549 | 2.419422e-51 | -8.615850e-47 |
| Msa0206790 | Msa0412840 | 0.807580 | 4.715031e-50 | -8.615850e-47 |
| Msa0206790 | Msa0415980 | 0.827280 | 1.707177e-54 | -8.615850e-47 |
| Msa0206790 | Msa0426900 | 0.807871 | 4.090251e-50 | -8.615850e-47 |
| Msa0206790 | Msa0433410 | -0.806318 | 8.721057e-50 | -8.615850e-47 |
| Msa0206790 | Msa0436370 | 0.844913 | 5.629253e-59 | -8.615850e-47 |
| Msa0206790 | Msa0445280 | 0.804541 | 2.055896e-49 | -8.615850e-47 |
| Msa0206790 | Msa0463550 | 0.814740 | 1.321168e-51 | -8.615850e-47 |
| Msa0206790 | Msa0469160 | 0.815812 | 7.630920e-52 | -8.615850e-47 |
| Msa0206790 | Msa0469940 | -0.830357 | 3.073609e-55 | -8.615850e-47 |
| Msa0206790 | Msa0473240 | 0.824172 | 9.321065e-54 | -8.615850e-47 |
| Msa0206790 | Msa0477130 | -0.809691 | 1.669916e-50 | -8.615850e-47 |
| Msa0206790 | Msa0484780 | 0.871120 | 8.705561e-67 | -8.615850e-47 |
| Msa0206790 | Msa0512870 | 0.816763 | 4.675551e-52 | -8.615850e-47 |
| Msa0206790 | Msa0512900 | 0.800072 | 1.710440e-48 | -8.615850e-47 |
| Msa0206790 | Msa0516370 | 0.832803 | 7.671773e-56 | -8.615850e-47 |
| Msa0206790 | Msa0517490 | 0.818828 | 1.598737e-52 | -8.615850e-47 |
| Msa0206790 | Msa0523460 | 0.814942 | 1.191133e-51 | -8.615850e-47 |
| Msa0206790 | Msa0534730 | 0.804347 | 2.256675e-49 | -8.615850e-47 |
| Msa0206790 | Msa0536220 | 0.821330 | 4.276793e-53 | -8.615850e-47 |
| Msa0206790 | Msa0553460 | 0.804397 | 2.202561e-49 | -8.615850e-47 |
| Msa0206790 | Msa0558690 | 0.853872 | 1.792842e-61 | -8.615850e-47 |
| Msa0206790 | Msa0562440 | 0.806538 | 7.836778e-50 | -8.615850e-47 |
| Msa0206790 | Msa0563840 | 0.800675 | 1.289605e-48 | -8.615850e-47 |
| Msa0206790 | Msa0567020 | 0.846219 | 2.491566e-59 | -8.615850e-47 |
| Msa0206790 | Msa0572420 | 0.828799 | 7.355250e-55 | -8.615850e-47 |
| Msa0206790 | Msa0572480 | 0.840540 | 8.175740e-58 | -8.615850e-47 |
| Msa0206790 | Msa0577500 | 0.807209 | 5.653416e-50 | -8.615850e-47 |
| Msa0206790 | Msa0579130 | 0.807048 | 6.112720e-50 | -8.615850e-47 |
| Msa0206790 | Msa0585230 | 0.804926 | 1.708815e-49 | -8.615850e-47 |
| Msa0206790 | Msa0587690 | 0.802206 | 6.261150e-49 | -8.615850e-47 |
| Msa0206790 | Msa0590840 | 0.805687 | 1.183768e-49 | -8.615850e-47 |
| Msa0206790 | Msa0598160 | 0.818520 | 1.878096e-52 | -8.615850e-47 |
| Msa0206790 | Msa0613460 | 0.830415 | 2.975010e-55 | -8.615850e-47 |
| Msa0206790 | Msa0617640 | 0.808101 | 3.653700e-50 | -8.615850e-47 |
| Msa0206790 | Msa0622650 | 0.815573 | 8.627358e-52 | -8.615850e-47 |
| Msa0206790 | Msa0626090 | 0.818960 | 1.492263e-52 | -8.615850e-47 |
| Msa0206790 | Msa0633840 | 0.808773 | 2.626527e-50 | -8.615850e-47 |
| Msa0206790 | Msa0637900 | 0.800485 | 1.409521e-48 | -8.615850e-47 |
| Msa0206790 | Msa0643180 | 0.801367 | 9.310080e-49 | -8.615850e-47 |
| Msa0206790 | Msa0651270 | 0.819740 | 9.909354e-53 | -8.615850e-47 |
| Msa0206790 | Msa0653660 | 0.809090 | 2.247290e-50 | -8.615850e-47 |
| Msa0206790 | Msa0654010 | 0.836931 | 7.006111e-57 | -8.615850e-47 |
| Msa0206790 | Msa0657970 | 0.825192 | 5.358997e-54 | -8.615850e-47 |
| Msa0206790 | Msa0658570 | 0.846318 | 2.341916e-59 | -8.615850e-47 |
| Msa0206790 | Msa0663380 | 0.805236 | 1.471285e-49 | -8.615850e-47 |
| Msa0206790 | Msa0669440 | 0.805627 | 1.218389e-49 | -8.615850e-47 |
| Msa0206790 | Msa0672690 | 0.808984 | 2.367084e-50 | -8.615850e-47 |
| Msa0206790 | Msa0682550 | 0.815671 | 8.205411e-52 | -8.615850e-47 |
| Msa0206790 | Msa0689800 | 0.820830 | 5.573878e-53 | -8.615850e-47 |
| Msa0206790 | Msa0691050 | 0.800727 | 1.258628e-48 | -8.615850e-47 |
| Msa0206790 | Msa0692230 | 0.828659 | 7.950450e-55 | -8.615850e-47 |
| Msa0206790 | Msa0693380 | 0.866466 | 2.792762e-65 | -8.615850e-47 |
| Msa0206790 | Msa0703490 | 0.821387 | 4.147891e-53 | -8.615850e-47 |
| Msa0206790 | Msa0703780 | 0.807138 | 5.850168e-50 | -8.615850e-47 |
| Msa0206790 | Msa0704920 | 0.831825 | 1.340180e-55 | -8.615850e-47 |
| Msa0206790 | Msa0711790 | 0.823479 | 1.355181e-53 | -8.615850e-47 |
| Msa0206790 | Msa0716530 | 0.820242 | 7.608443e-53 | -8.615850e-47 |
| Msa0206790 | Msa0716840 | 0.822444 | 2.360658e-53 | -8.615850e-47 |
| Msa0206790 | Msa0721280 | 0.812353 | 4.424047e-51 | -8.615850e-47 |
| Msa0206790 | Msa0724210 | 0.806916 | 6.520846e-50 | -8.615850e-47 |
| Msa0206790 | Msa0731180 | 0.800213 | 1.601236e-48 | -8.615850e-47 |
| Msa0206790 | Msa0744040 | 0.824440 | 8.061124e-54 | -8.615850e-47 |
| Msa0206790 | Msa0751850 | 0.801834 | 7.469480e-49 | -8.615850e-47 |
| Msa0206790 | Msa0764720 | 0.805434 | 1.337511e-49 | -8.615850e-47 |
| Msa0206790 | Msa0766630 | 0.814932 | 1.197269e-51 | -8.615850e-47 |
| Msa0206790 | Msa0773310 | 0.801413 | 9.111026e-49 | -8.615850e-47 |
| Msa0206790 | Msa0790510 | 0.818740 | 1.673954e-52 | -8.615850e-47 |
| Msa0206790 | Msa0807030 | 0.826781 | 2.247401e-54 | -8.615850e-47 |
| Msa0206790 | Msa0817460 | 0.809357 | 1.969590e-50 | -8.615850e-47 |
| Msa0206790 | Msa0824660 | 0.804227 | 2.390255e-49 | -8.615850e-47 |
| Msa0206790 | Msa0829620 | 0.800458 | 1.427890e-48 | -8.615850e-47 |
| Msa0206790 | Msa0830530 | 0.804742 | 1.866333e-49 | -8.615850e-47 |
| Msa0206790 | Msa0831850 | 0.800840 | 1.193004e-48 | -8.615850e-47 |
| Msa0206790 | Msa0832090 | 0.815072 | 1.114835e-51 | -8.615850e-47 |
| Msa0206790 | Msa0832150 | 0.815988 | 6.971810e-52 | -8.615850e-47 |
| Msa0206790 | Msa0840820 | 0.800736 | 1.252756e-48 | -8.615850e-47 |
| Msa0206790 | Msa0844240 | 0.818964 | 1.488699e-52 | -8.615850e-47 |
| Msa0206790 | Msa0844320 | 0.820404 | 6.982263e-53 | -8.615850e-47 |
| Msa0206790 | Msa0867890 | 0.813684 | 2.260100e-51 | -8.615850e-47 |
| Msa0206790 | Msa0870530 | 0.829563 | 4.799631e-55 | -8.615850e-47 |
| Msa0206790 | Msa0900620 | 0.835785 | 1.370486e-56 | -8.615850e-47 |
| Msa0206790 | Msa0903700 | 0.837488 | 5.047231e-57 | -8.615850e-47 |
| Msa0206790 | Msa0907070 | 0.800971 | 1.122058e-48 | -8.615850e-47 |
| Msa0206790 | Msa0922410 | 0.816949 | 4.246795e-52 | -8.615850e-47 |
| Msa0206790 | Msa0926470 | 0.803133 | 4.031421e-49 | -8.615850e-47 |
| Msa0206790 | Msa0931520 | 0.801656 | 8.124458e-49 | -8.615850e-47 |
| Msa0206790 | Msa0935410 | 0.806259 | 8.970954e-50 | -8.615850e-47 |
| Msa0206790 | Msa0935910 | 0.804543 | 2.053975e-49 | -8.615850e-47 |
| Msa0206790 | Msa0942550 | -0.806297 | 8.809891e-50 | -8.615850e-47 |
| Msa0206790 | Msa0942560 | -0.815141 | 1.076151e-51 | -8.615850e-47 |
| Msa0206790 | Msa0954550 | 0.802935 | 4.430698e-49 | -8.615850e-47 |
| Msa0206790 | Msa0962840 | 0.801552 | 8.532047e-49 | -8.615850e-47 |
| Msa0206790 | Msa0969520 | 0.813439 | 2.558385e-51 | -8.615850e-47 |
| Msa0206790 | Msa0973150 | 0.823224 | 1.553891e-53 | -8.615850e-47 |
| Msa0206790 | Msa1002850 | 0.816139 | 6.451247e-52 | -8.615850e-47 |
| Msa0206790 | Msa1006850 | 0.823580 | 1.283252e-53 | -8.615850e-47 |
| Msa0206790 | Msa1014540 | 0.814047 | 1.879858e-51 | -8.615850e-47 |
| Msa0206790 | Msa1021510 | 0.830130 | 3.492573e-55 | -8.615850e-47 |
| Msa0206790 | Msa1031770 | 0.806866 | 6.681498e-50 | -8.615850e-47 |
| Msa0206790 | Msa1037650 | -0.801308 | 9.572090e-49 | -8.615850e-47 |
| Msa0206790 | Msa1041730 | 0.807886 | 4.059985e-50 | -8.615850e-47 |
| Msa0206790 | Msa1070840 | 0.803879 | 2.823192e-49 | -8.615850e-47 |
| Msa0206790 | Msa1075220 | -0.843377 | 1.455096e-58 | -8.615850e-47 |
| Msa0206790 | Msa1080160 | 0.828733 | 7.629932e-55 | -8.615850e-47 |
| Msa0206790 | Msa1080800 | 0.800426 | 1.449418e-48 | -8.615850e-47 |
| Msa0206790 | Msa1081590 | 0.800256 | 1.569904e-48 | -8.615850e-47 |
| Msa0206790 | Msa1082500 | 0.865107 | 7.504973e-65 | -8.615850e-47 |
| Msa0206790 | Msa1084260 | 0.830575 | 2.718699e-55 | -8.615850e-47 |
| Msa0206790 | Msa1085300 | 0.839972 | 1.150674e-57 | -8.615850e-47 |
| Msa0206790 | Msa1087470 | 0.804317 | 2.288864e-49 | -8.615850e-47 |
| Msa0206790 | Msa1087980 | 0.823867 | 1.098975e-53 | -8.615850e-47 |
| Msa0206790 | Msa1089040 | 0.821128 | 4.760724e-53 | -8.615850e-47 |
| Msa0206790 | Msa1090330 | 0.801722 | 7.873330e-49 | -8.615850e-47 |
| Msa0206790 | Msa1100480 | 0.819467 | 1.143621e-52 | -8.615850e-47 |
| Msa0206790 | Msa1105500 | 0.831629 | 1.497606e-55 | -8.615850e-47 |
| Msa0206790 | Msa1116130 | -0.841769 | 3.887119e-58 | -8.615850e-47 |
| Msa0206790 | Msa1118760 | 0.806221 | 9.137719e-50 | -8.615850e-47 |
| Msa0206790 | Msa1124540 | -0.825235 | 5.235433e-54 | -8.615850e-47 |
| Msa0206790 | Msa1127770 | 0.807720 | 4.403958e-50 | -8.615850e-47 |
| Msa0206790 | Msa1135880 | 0.817888 | 2.610654e-52 | -8.615850e-47 |
| Msa0206790 | Msa1139000 | -0.840029 | 1.112084e-57 | -8.615850e-47 |
| Msa0206790 | Msa1144720 | -0.827633 | 1.404821e-54 | -8.615850e-47 |
| Msa0206790 | Msa1154280 | 0.805608 | 1.229453e-49 | -8.615850e-47 |
| Msa0206790 | Msa1158660 | 0.803832 | 2.888034e-49 | -8.615850e-47 |
| Msa0206790 | Msa1162550 | -0.841818 | 3.773649e-58 | -8.615850e-47 |
| Msa0206790 | Msa1219810 | 0.823455 | 1.372816e-53 | -8.615850e-47 |
| Msa0206790 | Msa1233890 | 0.818352 | 2.050427e-52 | -8.615850e-47 |
| Msa0206790 | Msa1242220 | 0.826223 | 3.052362e-54 | -8.615850e-47 |
| Msa0206790 | Msa1267060 | 0.844326 | 8.102449e-59 | -8.615850e-47 |
| Msa0206790 | Msa1270610 | 0.810138 | 1.338177e-50 | -8.615850e-47 |
| Msa0206790 | Msa1271300 | 0.802449 | 5.581658e-49 | -8.615850e-47 |
| Msa0206790 | Msa1276440 | 0.809506 | 1.829640e-50 | -8.615850e-47 |
| Msa0206790 | Msa1283860 | 0.832317 | 1.013104e-55 | -8.615850e-47 |
| Msa0206790 | Msa1284260 | 0.805239 | 1.469331e-49 | -8.615850e-47 |
| Msa0206790 | Msa1284680 | 0.802605 | 5.183567e-49 | -8.615850e-47 |
| Msa0206790 | Msa1287480 | 0.805621 | 1.221914e-49 | -8.615850e-47 |
| Msa0206790 | Msa1291660 | 0.805549 | 1.265130e-49 | -8.615850e-47 |
| Msa0206790 | Msa1297290 | 0.818859 | 1.573481e-52 | -8.615850e-47 |
| Msa0206790 | Msa1299070 | 0.813278 | 2.774720e-51 | -8.615850e-47 |
| Msa0206790 | Msa1305190 | 0.814951 | 1.185876e-51 | -8.615850e-47 |
| Msa0206790 | Msa1305340 | 0.811054 | 8.482466e-51 | -8.615850e-47 |
| Msa0206790 | Msa1306840 | 0.808632 | 2.815307e-50 | -8.615850e-47 |
| Msa0206790 | Msa1306850 | 0.802110 | 6.552576e-49 | -8.615850e-47 |
| Msa0206790 | Msa1308380 | 0.805052 | 1.608122e-49 | -8.615850e-47 |
| Msa0206790 | Msa1314340 | 0.806878 | 6.640932e-50 | -8.615850e-47 |
| Msa0206790 | Msa1322860 | 0.800827 | 1.200590e-48 | -8.615850e-47 |
| Msa0206790 | Msa1322890 | 0.830532 | 2.785014e-55 | -8.615850e-47 |
| Msa0206790 | Msa1327050 | 0.815143 | 1.075337e-51 | -8.615850e-47 |
| Msa0206790 | Msa1329700 | 0.802634 | 5.110613e-49 | -8.615850e-47 |
| Msa0206790 | Msa1340260 | 0.851980 | 6.229089e-61 | -8.615850e-47 |
| Msa0206790 | Msa1340270 | 0.839408 | 1.613501e-57 | -8.615850e-47 |
| Msa0206790 | Msa1340650 | 0.823798 | 1.141073e-53 | -8.615850e-47 |
| Msa0206790 | Msa1347490 | 0.807519 | 4.859320e-50 | -8.615850e-47 |
| Msa0206790 | Msa1348560 | 0.802136 | 6.473248e-49 | -8.615850e-47 |
| Msa0206790 | Msa1348880 | 0.821951 | 3.071943e-53 | -8.615850e-47 |
| Msa0206790 | Msa1353980 | 0.802490 | 5.473360e-49 | -8.615850e-47 |
| Msa0206790 | Msa1357890 | 0.809080 | 2.258208e-50 | -8.615850e-47 |
| Msa0206790 | Msa1371430 | 0.806265 | 8.946091e-50 | -8.615850e-47 |
| Msa0206790 | Msa1372150 | 0.816899 | 4.357928e-52 | -8.615850e-47 |
| Msa0206790 | Msa1376890 | 0.852517 | 4.384087e-61 | -8.615850e-47 |
| Msa0206790 | Msa1379850 | 0.842661 | 2.256829e-58 | -8.615850e-47 |
| Msa0206790 | Msa1383230 | 0.802146 | 6.443598e-49 | -8.615850e-47 |
| Msa0206790 | Msa1384350 | 0.841343 | 5.033344e-58 | -8.615850e-47 |
| Msa0206790 | Msa1385000 | 0.819925 | 8.989728e-53 | -8.615850e-47 |
| Msa0206790 | Msa1392260 | 0.834758 | 2.490358e-56 | -8.615850e-47 |
| Msa0206790 | Msa1393410 | 0.800006 | 1.764311e-48 | -8.615850e-47 |
| Msa0206790 | Msa1396780 | 0.823315 | 1.479642e-53 | -8.615850e-47 |
| Msa0206790 | Msa1397260 | 0.812148 | 4.905961e-51 | -8.615850e-47 |
| Msa0206790 | Msa1398090 | 0.804419 | 2.180042e-49 | -8.615850e-47 |
| Msa0206790 | Msa1401140 | 0.805381 | 1.372261e-49 | -8.615850e-47 |
| Msa0206790 | Msa1401530 | 0.826076 | 3.308663e-54 | -8.615850e-47 |
| Msa0206790 | Msa1404540 | 0.856537 | 3.009556e-62 | -8.615850e-47 |
| Msa0206790 | Msa1408790 | 0.807143 | 5.837366e-50 | -8.615850e-47 |
| Msa0206790 | Msa1410210 | 0.828333 | 9.531569e-55 | -8.615850e-47 |
| Msa0206790 | Msa1415640 | 0.809952 | 1.467283e-50 | -8.615850e-47 |
| Msa0206790 | Msa1419960 | 0.816439 | 5.527236e-52 | -8.615850e-47 |
| Msa0206790 | Msa1420290 | 0.828649 | 7.993208e-55 | -8.615850e-47 |
| Msa0206790 | Msa1424450 | 0.812651 | 3.807796e-51 | -8.615850e-47 |
| Msa0206790 | Msa1424680 | 0.819967 | 8.791636e-53 | -8.615850e-47 |
| Msa0206790 | Msa1429900 | 0.818208 | 2.210031e-52 | -8.615850e-47 |
| Msa0206790 | Msa1431060 | 0.847041 | 1.486152e-59 | -8.615850e-47 |
| Msa0206790 | Msa1435400 | 0.831048 | 2.081283e-55 | -8.615850e-47 |
| Msa0206790 | Msa1436040 | 0.803465 | 3.441731e-49 | -8.615850e-47 |
| Msa0206790 | Msa1440940 | 0.840337 | 9.239828e-58 | -8.615850e-47 |
| Msa0206790 | Msa1451620 | -0.832168 | 1.102573e-55 | -8.615850e-47 |
| Msa0206790 | Msa1454120 | 0.813796 | 2.134815e-51 | -8.615850e-47 |
| Msa0206790 | Msa1460050 | 0.815915 | 7.236852e-52 | -8.615850e-47 |
| Msa0206790 | Msa1466540 | 0.804704 | 1.901265e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206790 | MtrunA17_Chr2g0305161 | 97.354 | 189 | 5 | 0 | 1 | 189 | 1 | 189 | 2.29e-138 | 384 |
| Msa0206790 | MtrunA17_Chr4g0065191 | 46.809 | 94 | 40 | 2 | 4 | 97 | 1 | 84 | 2.78e-16 | 70.9 |
| Msa0206790 | MtrunA17_Chr1g0207561 | 58.333 | 48 | 20 | 0 | 140 | 187 | 198 | 245 | 1.90e-14 | 69.3 |
| Msa0206790 | MtrunA17_Chr3g0121201 | 41.429 | 70 | 40 | 1 | 117 | 186 | 213 | 281 | 1.14e-13 | 68.2 |
| Msa0206790 | MtrunA17_Chr1g0169651 | 55.319 | 47 | 21 | 0 | 140 | 186 | 681 | 727 | 7.96e-13 | 66.2 |
| Msa0206790 | MtrunA17_Chr6g0451051 | 55.319 | 47 | 20 | 1 | 141 | 186 | 65 | 111 | 7.08e-12 | 60.8 |
| Msa0206790 | MtrunA17_Chr3g0112041 | 48.000 | 50 | 25 | 1 | 135 | 183 | 205 | 254 | 1.06e-11 | 62.0 |
| Msa0206790 | MtrunA17_Chr1g0150571 | 48.837 | 43 | 22 | 0 | 141 | 183 | 232 | 274 | 6.89e-11 | 60.1 |
| Msa0206790 | MtrunA17_Chr8g0336881 | 45.312 | 64 | 32 | 2 | 127 | 187 | 88 | 151 | 7.25e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0206790 | AT2G15580.1 | 47.264 | 201 | 84 | 6 | 1 | 186 | 1 | 194 | 3.97e-51 | 163 |
| Msa0206790 | AT1G49850.1 | 60.000 | 50 | 20 | 0 | 137 | 186 | 198 | 247 | 3.14e-16 | 74.7 |
| Msa0206790 | AT2G15580.3 | 47.000 | 100 | 34 | 4 | 1 | 86 | 1 | 95 | 6.20e-16 | 70.5 |
| Msa0206790 | AT2G15580.2 | 47.000 | 100 | 34 | 4 | 1 | 86 | 1 | 95 | 8.66e-16 | 70.9 |
| Msa0206790 | AT1G55530.1 | 28.962 | 183 | 95 | 5 | 9 | 183 | 109 | 264 | 2.92e-13 | 67.4 |
| Msa0206790 | AT1G55530.2 | 28.962 | 183 | 95 | 5 | 9 | 183 | 109 | 264 | 2.92e-13 | 67.4 |
| Msa0206790 | AT1G04790.1 | 50.000 | 48 | 24 | 0 | 139 | 186 | 586 | 633 | 5.32e-13 | 67.0 |
| Msa0206790 | AT1G55530.3 | 55.102 | 49 | 22 | 0 | 135 | 183 | 183 | 231 | 2.10e-12 | 64.7 |
| Msa0206790 | AT3G13430.4 | 59.524 | 42 | 17 | 0 | 142 | 183 | 225 | 266 | 5.75e-12 | 63.5 |
| Msa0206790 | AT3G13430.3 | 59.524 | 42 | 17 | 0 | 142 | 183 | 225 | 266 | 5.75e-12 | 63.5 |
| Msa0206790 | AT3G13430.1 | 59.524 | 42 | 17 | 0 | 142 | 183 | 225 | 266 | 5.75e-12 | 63.5 |
| Msa0206790 | AT3G13430.2 | 59.524 | 42 | 17 | 0 | 142 | 183 | 225 | 266 | 5.75e-12 | 63.5 |
| Msa0206790 | AT1G68070.1 | 50.000 | 50 | 25 | 0 | 138 | 187 | 288 | 337 | 5.95e-12 | 63.5 |
| Msa0206790 | AT1G74620.1 | 33.735 | 83 | 50 | 2 | 109 | 186 | 146 | 228 | 8.53e-12 | 62.4 |
| Msa0206790 | AT5G20910.1 | 51.111 | 45 | 22 | 0 | 139 | 183 | 227 | 271 | 1.61e-11 | 62.0 |
| Msa0206790 | AT5G08139.1 | 52.381 | 42 | 20 | 0 | 142 | 183 | 309 | 350 | 6.91e-11 | 60.5 |
Find 57 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATACCTCTTATATTTATT+TGG | 0.165927 | 2_1:+36605156 | Msa0206790:five_prime_UTR |
| TGGAAGCATTCCTGCCATTT+TGG | 0.188105 | 2_1:-36605402 | None:intergenic |
| TATAAGAGGTATTCCTTAAT+AGG | 0.257955 | 2_1:-36605147 | None:intergenic |
| ACAACAAATTTAGACAATTA+AGG | 0.274164 | 2_1:-36606328 | None:intergenic |
| CAGAAAATCCTCCAGACTTA+TGG | 0.295617 | 2_1:-36605454 | None:intergenic |
| GTCCACCGACTCACCTATTA+AGG | 0.310277 | 2_1:+36605134 | Msa0206790:five_prime_UTR |
| GAGTTACAAACTGAGGTATA+TGG | 0.311218 | 2_1:+36606075 | Msa0206790:CDS |
| GGAAATAGTGAAAATCTAAA+AGG | 0.323787 | 2_1:-36606307 | None:intergenic |
| AAGAAATGAAAAGCTTGTTT+AGG | 0.331374 | 2_1:-36605222 | None:intergenic |
| TTTGTCATCCAATCTTTGTT+TGG | 0.351023 | 2_1:-36605756 | None:intergenic |
| CTCCTACCATATTCTCATCT+TGG | 0.373947 | 2_1:-36605721 | None:intergenic |
| GTCACACCAAGATGAGAATA+TGG | 0.386289 | 2_1:+36605715 | Msa0206790:CDS |
| TTGCTCCAACTGAACTTCCT+TGG | 0.389745 | 2_1:-36606114 | None:intergenic |
| ATTCCACATGCTTGAAGCCT+TGG | 0.391055 | 2_1:+36606238 | Msa0206790:CDS |
| TGAATGATTAGAACTGCTTT+TGG | 0.405186 | 2_1:-36605285 | None:intergenic |
| AAATTTGTTGTAGACTTTGT+TGG | 0.406680 | 2_1:+36606340 | Msa0206790:three_prime_UTR |
| CTTCTAGCTGATTCAACTCC+TGG | 0.409347 | 2_1:-36605422 | None:intergenic |
| TATTTCCTCATCATCTTCAA+TGG | 0.411710 | 2_1:+36605553 | Msa0206790:CDS |
| AGAGGATTGTGCTGTGTGTT+TGG | 0.420957 | 2_1:+36606161 | Msa0206790:CDS |
| AAAATGGCAGGAATGCTTCC+AGG | 0.421917 | 2_1:+36605404 | Msa0206790:exon |
| CCTCTTATATTTATTTGGTT+AGG | 0.421945 | 2_1:+36605161 | Msa0206790:five_prime_UTR |
| AGAAGACGTGTCCATAAGTC+TGG | 0.443956 | 2_1:+36605443 | Msa0206790:CDS |
| CCTAACCAAATAAATATAAG+AGG | 0.459168 | 2_1:-36605161 | None:intergenic |
| TATTCTCATCTTGGTGTGAC+TGG | 0.474654 | 2_1:-36605712 | None:intergenic |
| TGTTTGGAATCATTTAAGAT+TGG | 0.475277 | 2_1:+36606177 | Msa0206790:CDS |
| ATGAGGAAATACGAGATTCA+TGG | 0.479758 | 2_1:-36605541 | None:intergenic |
| AAAGGGTATCAGAAAACATA+AGG | 0.481341 | 2_1:+36605789 | Msa0206790:CDS |
| GTGGACAGAATTAGACCATT+GGG | 0.483547 | 2_1:-36605117 | None:intergenic |
| TAGAGCAGCCAAACAAAGAT+TGG | 0.490480 | 2_1:+36605748 | Msa0206790:CDS |
| AATGAAAAGCTTGTTTAGGT+GGG | 0.491071 | 2_1:-36605218 | None:intergenic |
| AAATGAAAAGCTTGTTTAGG+TGG | 0.493240 | 2_1:-36605219 | None:intergenic |
| GAAAATCTAAAAGGAAAGAA+TGG | 0.503693 | 2_1:-36606298 | None:intergenic |
| AGTTACAAACTGAGGTATAT+GGG | 0.503707 | 2_1:+36606076 | Msa0206790:CDS |
| TCAGTTGGAGCAAATTGAGC+TGG | 0.509816 | 2_1:+36606124 | Msa0206790:CDS |
| AACTTGTGTGCACAAGGTAA+AGG | 0.529312 | 2_1:-36606213 | None:intergenic |
| GTGGTCCAAGGAAGTTCAGT+TGG | 0.539114 | 2_1:+36606109 | Msa0206790:CDS |
| ATAATGCTTTGGTGATTGAC+AGG | 0.547366 | 2_1:-36605308 | None:intergenic |
| TGACAAATTCAGATCACAAA+GGG | 0.548128 | 2_1:+36605772 | Msa0206790:CDS |
| TAACCAAGGCTTCAAGCATG+TGG | 0.558920 | 2_1:-36606241 | None:intergenic |
| GGTGGACAGAATTAGACCAT+TGG | 0.567852 | 2_1:-36605118 | None:intergenic |
| AAGAACATGAAGTGTGTGGA+AGG | 0.571227 | 2_1:+36606033 | Msa0206790:CDS |
| CTGGAAAGCAACGGAACAAG+AGG | 0.575447 | 2_1:+36606143 | Msa0206790:CDS |
| ACAAACCATTGAAGATGATG+AGG | 0.590614 | 2_1:-36605558 | None:intergenic |
| AGAAAATCTTTAAAACCCAA+TGG | 0.591918 | 2_1:+36605102 | None:intergenic |
| AAGGCTTCAAGCATGTGGAA+TGG | 0.593453 | 2_1:-36606236 | None:intergenic |
| CAAATTGAGCTGGAAAGCAA+CGG | 0.606747 | 2_1:+36606134 | Msa0206790:CDS |
| GGACAAAGAAAAGTGGTCCA+AGG | 0.620165 | 2_1:+36606097 | Msa0206790:CDS |
| TTCCTTAATAGGTGAGTCGG+TGG | 0.622438 | 2_1:-36605136 | None:intergenic |
| GTATTCCTTAATAGGTGAGT+CGG | 0.624545 | 2_1:-36605139 | None:intergenic |
| GTATATGGGACAAAGAAAAG+TGG | 0.626148 | 2_1:+36606090 | Msa0206790:CDS |
| GAATGGAACTTGTGTGCACA+AGG | 0.639361 | 2_1:-36606219 | None:intergenic |
| CATAGAAGAGTTACAAACTG+AGG | 0.641006 | 2_1:+36606068 | Msa0206790:CDS |
| TTTGTTGGATGAATGAAGTG+AGG | 0.658438 | 2_1:+36606355 | Msa0206790:three_prime_UTR |
| ATGACAAATTCAGATCACAA+AGG | 0.661195 | 2_1:+36605771 | Msa0206790:CDS |
| AGAATGGTAGTTCTACAACA+TGG | 0.664178 | 2_1:-36606282 | None:intergenic |
| CACCAAGATGAGAATATGGT+AGG | 0.666185 | 2_1:+36605719 | Msa0206790:CDS |
| AGACGTGTCCATAAGTCTGG+AGG | 0.667088 | 2_1:+36605446 | Msa0206790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATAAAAAAAAAAA+AGG | - | chr2_1:36605628-36605647 | None:intergenic | 0.0% |
| !! | TTATTTATTAATATTATTTA+TGG | + | chr2_1:36605658-36605677 | Msa0206790:intron | 0.0% |
| !! | AATATATATAAAAAAAAAAA+AGG | - | chr2_1:36605628-36605647 | None:intergenic | 0.0% |
| !! | TTATTTATTAATATTATTTA+TGG | + | chr2_1:36605658-36605677 | Msa0206790:intron | 0.0% |
| !!! | AAATAAAAAACTATCTTTTT+AGG | - | chr2_1:36605851-36605870 | None:intergenic | 10.0% |
| !!! | AAATAAAAAACTATCTTTTT+AGG | - | chr2_1:36605851-36605870 | None:intergenic | 10.0% |
| !!! | GAAAATAAATCAAAACTTTT+TGG | - | chr2_1:36605829-36605848 | None:intergenic | 15.0% |
| !!! | GAAAATAAATCAAAACTTTT+TGG | - | chr2_1:36605829-36605848 | None:intergenic | 15.0% |
| !! | GAATACCTCTTATATTTATT+TGG | + | chr2_1:36605156-36605175 | Msa0206790:five_prime_UTR | 20.0% |
| !!! | TGTTTTTGATAATAATGCTT+TGG | - | chr2_1:36605322-36605341 | None:intergenic | 20.0% |
| !! | ACAACAAATTTAGACAATTA+AGG | - | chr2_1:36606331-36606350 | None:intergenic | 20.0% |
| !! | GAATACCTCTTATATTTATT+TGG | + | chr2_1:36605156-36605175 | Msa0206790:five_prime_UTR | 20.0% |
| !!! | TGTTTTTGATAATAATGCTT+TGG | - | chr2_1:36605322-36605341 | None:intergenic | 20.0% |
| !! | ACAACAAATTTAGACAATTA+AGG | - | chr2_1:36606331-36606350 | None:intergenic | 20.0% |
| !!! | TATAAGAGGTATTCCTTAAT+AGG | - | chr2_1:36605150-36605169 | None:intergenic | 25.0% |
| ! | CCTAACCAAATAAATATAAG+AGG | - | chr2_1:36605164-36605183 | None:intergenic | 25.0% |
| ! | CCTCTTATATTTATTTGGTT+AGG | + | chr2_1:36605161-36605180 | Msa0206790:five_prime_UTR | 25.0% |
| !! | AAGAAATGAAAAGCTTGTTT+AGG | - | chr2_1:36605225-36605244 | None:intergenic | 25.0% |
| ! | TTTGTTCAAACACAGAAAAA+AGG | + | chr2_1:36605378-36605397 | Msa0206790:five_prime_UTR | 25.0% |
| ! | ATTAATCAGATCTAAGTTCT+AGG | - | chr2_1:36605940-36605959 | None:intergenic | 25.0% |
| !!! | GAAACTTGTTATGTATTACT+AGG | + | chr2_1:36606007-36606026 | Msa0206790:intron | 25.0% |
| !! | TGTTTGGAATCATTTAAGAT+TGG | + | chr2_1:36606177-36606196 | Msa0206790:CDS | 25.0% |
| !! | TGTGAATTATTTTCTAACCA+AGG | - | chr2_1:36606258-36606277 | None:intergenic | 25.0% |
| ! | GAAAATCTAAAAGGAAAGAA+TGG | - | chr2_1:36606301-36606320 | None:intergenic | 25.0% |
| ! | GGAAATAGTGAAAATCTAAA+AGG | - | chr2_1:36606310-36606329 | None:intergenic | 25.0% |
| !!! | AAATTTGTTGTAGACTTTGT+TGG | + | chr2_1:36606340-36606359 | Msa0206790:three_prime_UTR | 25.0% |
| !!! | TATAAGAGGTATTCCTTAAT+AGG | - | chr2_1:36605150-36605169 | None:intergenic | 25.0% |
| ! | CCTAACCAAATAAATATAAG+AGG | - | chr2_1:36605164-36605183 | None:intergenic | 25.0% |
| ! | CCTCTTATATTTATTTGGTT+AGG | + | chr2_1:36605161-36605180 | Msa0206790:five_prime_UTR | 25.0% |
| !! | AAGAAATGAAAAGCTTGTTT+AGG | - | chr2_1:36605225-36605244 | None:intergenic | 25.0% |
| ! | TTTGTTCAAACACAGAAAAA+AGG | + | chr2_1:36605378-36605397 | Msa0206790:five_prime_UTR | 25.0% |
| ! | ATTAATCAGATCTAAGTTCT+AGG | - | chr2_1:36605940-36605959 | None:intergenic | 25.0% |
| !!! | GAAACTTGTTATGTATTACT+AGG | + | chr2_1:36606007-36606026 | Msa0206790:intron | 25.0% |
| !! | TGTTTGGAATCATTTAAGAT+TGG | + | chr2_1:36606177-36606196 | Msa0206790:CDS | 25.0% |
| !! | TGTGAATTATTTTCTAACCA+AGG | - | chr2_1:36606258-36606277 | None:intergenic | 25.0% |
| ! | GAAAATCTAAAAGGAAAGAA+TGG | - | chr2_1:36606301-36606320 | None:intergenic | 25.0% |
| ! | GGAAATAGTGAAAATCTAAA+AGG | - | chr2_1:36606310-36606329 | None:intergenic | 25.0% |
| !!! | AAATTTGTTGTAGACTTTGT+TGG | + | chr2_1:36606340-36606359 | Msa0206790:three_prime_UTR | 25.0% |
| ! | AATGAAAAGCTTGTTTAGGT+GGG | - | chr2_1:36605221-36605240 | None:intergenic | 30.0% |
| ! | AAATGAAAAGCTTGTTTAGG+TGG | - | chr2_1:36605222-36605241 | None:intergenic | 30.0% |
| ! | TGAATGATTAGAACTGCTTT+TGG | - | chr2_1:36605288-36605307 | None:intergenic | 30.0% |
| GTGTTATGAGAAGAAAAAGA+TGG | - | chr2_1:36605485-36605504 | None:intergenic | 30.0% | |
| TATTTCCTCATCATCTTCAA+TGG | + | chr2_1:36605553-36605572 | Msa0206790:CDS | 30.0% | |
| TTTGTCATCCAATCTTTGTT+TGG | - | chr2_1:36605759-36605778 | None:intergenic | 30.0% | |
| ATGACAAATTCAGATCACAA+AGG | + | chr2_1:36605771-36605790 | Msa0206790:CDS | 30.0% | |
| TGACAAATTCAGATCACAAA+GGG | + | chr2_1:36605772-36605791 | Msa0206790:CDS | 30.0% | |
| !! | AAAGGGTATCAGAAAACATA+AGG | + | chr2_1:36605789-36605808 | Msa0206790:CDS | 30.0% |
| AGTTACAAACTGAGGTATAT+GGG | + | chr2_1:36606076-36606095 | Msa0206790:CDS | 30.0% | |
| ! | AATGAAAAGCTTGTTTAGGT+GGG | - | chr2_1:36605221-36605240 | None:intergenic | 30.0% |
| ! | AAATGAAAAGCTTGTTTAGG+TGG | - | chr2_1:36605222-36605241 | None:intergenic | 30.0% |
| ! | TGAATGATTAGAACTGCTTT+TGG | - | chr2_1:36605288-36605307 | None:intergenic | 30.0% |
| GTGTTATGAGAAGAAAAAGA+TGG | - | chr2_1:36605485-36605504 | None:intergenic | 30.0% | |
| TATTTCCTCATCATCTTCAA+TGG | + | chr2_1:36605553-36605572 | Msa0206790:CDS | 30.0% | |
| TTTGTCATCCAATCTTTGTT+TGG | - | chr2_1:36605759-36605778 | None:intergenic | 30.0% | |
| ATGACAAATTCAGATCACAA+AGG | + | chr2_1:36605771-36605790 | Msa0206790:CDS | 30.0% | |
| TGACAAATTCAGATCACAAA+GGG | + | chr2_1:36605772-36605791 | Msa0206790:CDS | 30.0% | |
| !! | AAAGGGTATCAGAAAACATA+AGG | + | chr2_1:36605789-36605808 | Msa0206790:CDS | 30.0% |
| AGTTACAAACTGAGGTATAT+GGG | + | chr2_1:36606076-36606095 | Msa0206790:CDS | 30.0% | |
| GTATTCCTTAATAGGTGAGT+CGG | - | chr2_1:36605142-36605161 | None:intergenic | 35.0% | |
| ! | ATAATGCTTTGGTGATTGAC+AGG | - | chr2_1:36605311-36605330 | None:intergenic | 35.0% |
| CACAGAAAAAAGGACCAAAA+TGG | + | chr2_1:36605388-36605407 | Msa0206790:exon | 35.0% | |
| ATGAGGAAATACGAGATTCA+TGG | - | chr2_1:36605544-36605563 | None:intergenic | 35.0% | |
| ACAAACCATTGAAGATGATG+AGG | - | chr2_1:36605561-36605580 | None:intergenic | 35.0% | |
| GAAAAAGAACATGAAGTGTG+TGG | + | chr2_1:36606029-36606048 | Msa0206790:CDS | 35.0% | |
| CATAGAAGAGTTACAAACTG+AGG | + | chr2_1:36606068-36606087 | Msa0206790:CDS | 35.0% | |
| GAGTTACAAACTGAGGTATA+TGG | + | chr2_1:36606075-36606094 | Msa0206790:CDS | 35.0% | |
| GTATATGGGACAAAGAAAAG+TGG | + | chr2_1:36606090-36606109 | Msa0206790:CDS | 35.0% | |
| ! | AGAATGGTAGTTCTACAACA+TGG | - | chr2_1:36606285-36606304 | None:intergenic | 35.0% |
| TTTGTTGGATGAATGAAGTG+AGG | + | chr2_1:36606355-36606374 | Msa0206790:three_prime_UTR | 35.0% | |
| GTATTCCTTAATAGGTGAGT+CGG | - | chr2_1:36605142-36605161 | None:intergenic | 35.0% | |
| ! | ATAATGCTTTGGTGATTGAC+AGG | - | chr2_1:36605311-36605330 | None:intergenic | 35.0% |
| CACAGAAAAAAGGACCAAAA+TGG | + | chr2_1:36605388-36605407 | Msa0206790:exon | 35.0% | |
| ATGAGGAAATACGAGATTCA+TGG | - | chr2_1:36605544-36605563 | None:intergenic | 35.0% | |
| ACAAACCATTGAAGATGATG+AGG | - | chr2_1:36605561-36605580 | None:intergenic | 35.0% | |
| GAAAAAGAACATGAAGTGTG+TGG | + | chr2_1:36606029-36606048 | Msa0206790:CDS | 35.0% | |
| CATAGAAGAGTTACAAACTG+AGG | + | chr2_1:36606068-36606087 | Msa0206790:CDS | 35.0% | |
| GAGTTACAAACTGAGGTATA+TGG | + | chr2_1:36606075-36606094 | Msa0206790:CDS | 35.0% | |
| GTATATGGGACAAAGAAAAG+TGG | + | chr2_1:36606090-36606109 | Msa0206790:CDS | 35.0% | |
| ! | AGAATGGTAGTTCTACAACA+TGG | - | chr2_1:36606285-36606304 | None:intergenic | 35.0% |
| TTTGTTGGATGAATGAAGTG+AGG | + | chr2_1:36606355-36606374 | Msa0206790:three_prime_UTR | 35.0% | |
| GTGGACAGAATTAGACCATT+GGG | - | chr2_1:36605120-36605139 | None:intergenic | 40.0% | |
| GAAAAAAGGACCAAAATGGC+AGG | + | chr2_1:36605392-36605411 | Msa0206790:exon | 40.0% | |
| CAGAAAATCCTCCAGACTTA+TGG | - | chr2_1:36605457-36605476 | None:intergenic | 40.0% | |
| !! | ACAAAAAGAAGAGCGTCTTG+AGG | - | chr2_1:36605507-36605526 | None:intergenic | 40.0% |
| ! | TATTCTCATCTTGGTGTGAC+TGG | - | chr2_1:36605715-36605734 | None:intergenic | 40.0% |
| GTCACACCAAGATGAGAATA+TGG | + | chr2_1:36605715-36605734 | Msa0206790:CDS | 40.0% | |
| CACCAAGATGAGAATATGGT+AGG | + | chr2_1:36605719-36605738 | Msa0206790:CDS | 40.0% | |
| CTCCTACCATATTCTCATCT+TGG | - | chr2_1:36605724-36605743 | None:intergenic | 40.0% | |
| TAGAGCAGCCAAACAAAGAT+TGG | + | chr2_1:36605748-36605767 | Msa0206790:CDS | 40.0% | |
| AAGAACATGAAGTGTGTGGA+AGG | + | chr2_1:36606033-36606052 | Msa0206790:CDS | 40.0% | |
| CAAATTGAGCTGGAAAGCAA+CGG | + | chr2_1:36606134-36606153 | Msa0206790:CDS | 40.0% | |
| AACTTGTGTGCACAAGGTAA+AGG | - | chr2_1:36606216-36606235 | None:intergenic | 40.0% | |
| GTGGACAGAATTAGACCATT+GGG | - | chr2_1:36605120-36605139 | None:intergenic | 40.0% | |
| GAAAAAAGGACCAAAATGGC+AGG | + | chr2_1:36605392-36605411 | Msa0206790:exon | 40.0% | |
| CAGAAAATCCTCCAGACTTA+TGG | - | chr2_1:36605457-36605476 | None:intergenic | 40.0% | |
| !! | ACAAAAAGAAGAGCGTCTTG+AGG | - | chr2_1:36605507-36605526 | None:intergenic | 40.0% |
| ! | TATTCTCATCTTGGTGTGAC+TGG | - | chr2_1:36605715-36605734 | None:intergenic | 40.0% |
| GTCACACCAAGATGAGAATA+TGG | + | chr2_1:36605715-36605734 | Msa0206790:CDS | 40.0% | |
| CACCAAGATGAGAATATGGT+AGG | + | chr2_1:36605719-36605738 | Msa0206790:CDS | 40.0% | |
| CTCCTACCATATTCTCATCT+TGG | - | chr2_1:36605724-36605743 | None:intergenic | 40.0% | |
| TAGAGCAGCCAAACAAAGAT+TGG | + | chr2_1:36605748-36605767 | Msa0206790:CDS | 40.0% | |
| AAGAACATGAAGTGTGTGGA+AGG | + | chr2_1:36606033-36606052 | Msa0206790:CDS | 40.0% | |
| CAAATTGAGCTGGAAAGCAA+CGG | + | chr2_1:36606134-36606153 | Msa0206790:CDS | 40.0% | |
| AACTTGTGTGCACAAGGTAA+AGG | - | chr2_1:36606216-36606235 | None:intergenic | 40.0% | |
| GGTGGACAGAATTAGACCAT+TGG | - | chr2_1:36605121-36605140 | None:intergenic | 45.0% | |
| TTCCTTAATAGGTGAGTCGG+TGG | - | chr2_1:36605139-36605158 | None:intergenic | 45.0% | |
| !!! | CTGCTTTTGGTGATGCTAGT+GGG | - | chr2_1:36605275-36605294 | None:intergenic | 45.0% |
| !!! | ACTGCTTTTGGTGATGCTAG+TGG | - | chr2_1:36605276-36605295 | None:intergenic | 45.0% |
| !!! | TGGAAGCATTCCTGCCATTT+TGG | - | chr2_1:36605405-36605424 | None:intergenic | 45.0% |
| AAAATGGCAGGAATGCTTCC+AGG | + | chr2_1:36605404-36605423 | Msa0206790:exon | 45.0% | |
| ! | CTTCTAGCTGATTCAACTCC+TGG | - | chr2_1:36605425-36605444 | None:intergenic | 45.0% |
| AGAAGACGTGTCCATAAGTC+TGG | + | chr2_1:36605443-36605462 | Msa0206790:CDS | 45.0% | |
| GGACAAAGAAAAGTGGTCCA+AGG | + | chr2_1:36606097-36606116 | Msa0206790:CDS | 45.0% | |
| TTGCTCCAACTGAACTTCCT+TGG | - | chr2_1:36606117-36606136 | None:intergenic | 45.0% | |
| TCAGTTGGAGCAAATTGAGC+TGG | + | chr2_1:36606124-36606143 | Msa0206790:CDS | 45.0% | |
| AGAGGATTGTGCTGTGTGTT+TGG | + | chr2_1:36606161-36606180 | Msa0206790:CDS | 45.0% | |
| GAATGGAACTTGTGTGCACA+AGG | - | chr2_1:36606222-36606241 | None:intergenic | 45.0% | |
| AAGGCTTCAAGCATGTGGAA+TGG | - | chr2_1:36606239-36606258 | None:intergenic | 45.0% | |
| ATTCCACATGCTTGAAGCCT+TGG | + | chr2_1:36606238-36606257 | Msa0206790:CDS | 45.0% | |
| TAACCAAGGCTTCAAGCATG+TGG | - | chr2_1:36606244-36606263 | None:intergenic | 45.0% | |
| GGTGGACAGAATTAGACCAT+TGG | - | chr2_1:36605121-36605140 | None:intergenic | 45.0% | |
| TTCCTTAATAGGTGAGTCGG+TGG | - | chr2_1:36605139-36605158 | None:intergenic | 45.0% | |
| !!! | CTGCTTTTGGTGATGCTAGT+GGG | - | chr2_1:36605275-36605294 | None:intergenic | 45.0% |
| !!! | ACTGCTTTTGGTGATGCTAG+TGG | - | chr2_1:36605276-36605295 | None:intergenic | 45.0% |
| !!! | TGGAAGCATTCCTGCCATTT+TGG | - | chr2_1:36605405-36605424 | None:intergenic | 45.0% |
| AAAATGGCAGGAATGCTTCC+AGG | + | chr2_1:36605404-36605423 | Msa0206790:exon | 45.0% | |
| ! | CTTCTAGCTGATTCAACTCC+TGG | - | chr2_1:36605425-36605444 | None:intergenic | 45.0% |
| AGAAGACGTGTCCATAAGTC+TGG | + | chr2_1:36605443-36605462 | Msa0206790:CDS | 45.0% | |
| GGACAAAGAAAAGTGGTCCA+AGG | + | chr2_1:36606097-36606116 | Msa0206790:CDS | 45.0% | |
| TTGCTCCAACTGAACTTCCT+TGG | - | chr2_1:36606117-36606136 | None:intergenic | 45.0% | |
| TCAGTTGGAGCAAATTGAGC+TGG | + | chr2_1:36606124-36606143 | Msa0206790:CDS | 45.0% | |
| AGAGGATTGTGCTGTGTGTT+TGG | + | chr2_1:36606161-36606180 | Msa0206790:CDS | 45.0% | |
| GAATGGAACTTGTGTGCACA+AGG | - | chr2_1:36606222-36606241 | None:intergenic | 45.0% | |
| AAGGCTTCAAGCATGTGGAA+TGG | - | chr2_1:36606239-36606258 | None:intergenic | 45.0% | |
| ATTCCACATGCTTGAAGCCT+TGG | + | chr2_1:36606238-36606257 | Msa0206790:CDS | 45.0% | |
| TAACCAAGGCTTCAAGCATG+TGG | - | chr2_1:36606244-36606263 | None:intergenic | 45.0% | |
| !! | GTCCACCGACTCACCTATTA+AGG | + | chr2_1:36605134-36605153 | Msa0206790:five_prime_UTR | 50.0% |
| AGACGTGTCCATAAGTCTGG+AGG | + | chr2_1:36605446-36605465 | Msa0206790:CDS | 50.0% | |
| GTGGTCCAAGGAAGTTCAGT+TGG | + | chr2_1:36606109-36606128 | Msa0206790:CDS | 50.0% | |
| CTGGAAAGCAACGGAACAAG+AGG | + | chr2_1:36606143-36606162 | Msa0206790:CDS | 50.0% | |
| !! | GTCCACCGACTCACCTATTA+AGG | + | chr2_1:36605134-36605153 | Msa0206790:five_prime_UTR | 50.0% |
| AGACGTGTCCATAAGTCTGG+AGG | + | chr2_1:36605446-36605465 | Msa0206790:CDS | 50.0% | |
| GTGGTCCAAGGAAGTTCAGT+TGG | + | chr2_1:36606109-36606128 | Msa0206790:CDS | 50.0% | |
| CTGGAAAGCAACGGAACAAG+AGG | + | chr2_1:36606143-36606162 | Msa0206790:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 36605104 | 36606384 | 36605104 | ID=Msa0206790;Name=Msa0206790 |
| chr2_1 | mRNA | 36605104 | 36606384 | 36605104 | ID=Msa0206790-mRNA-1;Parent=Msa0206790;Name=Msa0206790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=303|1|1|1|1|1|3|70|189 |
| chr2_1 | exon | 36605104 | 36605574 | 36605104 | ID=Msa0206790-mRNA-1:exon:11935;Parent=Msa0206790-mRNA-1 |
| chr2_1 | exon | 36605695 | 36605810 | 36605695 | ID=Msa0206790-mRNA-1:exon:11936;Parent=Msa0206790-mRNA-1 |
| chr2_1 | exon | 36606029 | 36606384 | 36606029 | ID=Msa0206790-mRNA-1:exon:11937;Parent=Msa0206790-mRNA-1 |
| chr2_1 | five_prime_UTR | 36605104 | 36605406 | 36605104 | ID=Msa0206790-mRNA-1:five_prime_utr;Parent=Msa0206790-mRNA-1 |
| chr2_1 | CDS | 36605407 | 36605574 | 36605407 | ID=Msa0206790-mRNA-1:cds;Parent=Msa0206790-mRNA-1 |
| chr2_1 | CDS | 36605695 | 36605810 | 36605695 | ID=Msa0206790-mRNA-1:cds;Parent=Msa0206790-mRNA-1 |
| chr2_1 | CDS | 36606029 | 36606314 | 36606029 | ID=Msa0206790-mRNA-1:cds;Parent=Msa0206790-mRNA-1 |
| chr2_1 | three_prime_UTR | 36606315 | 36606384 | 36606315 | ID=Msa0206790-mRNA-1:three_prime_utr;Parent=Msa0206790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
