Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125720 | AES82055.2 | 95.515 | 379 | 15 | 1 | 1 | 379 | 25 | 401 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125720 | sp|Q9FVS1|FBK23_ARATH | 44.789 | 355 | 182 | 6 | 24 | 374 | 3 | 347 | 3.40e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125720 | G7KQW3 | 95.515 | 379 | 15 | 1 | 1 | 379 | 25 | 401 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa1125720 | 0.800552 | 1.366206e-48 | -8.615850e-47 |
| Msa0692040 | Msa1125720 | -0.805589 | 1.240866e-49 | -8.615850e-47 |
| Msa0740510 | Msa1125720 | 0.809676 | 1.682431e-50 | -8.615850e-47 |
| Msa0756540 | Msa1125720 | 0.803601 | 3.224738e-49 | -8.615850e-47 |
| Msa0790890 | Msa1125720 | 0.893962 | 3.853412e-75 | -8.615850e-47 |
| Msa0795250 | Msa1125720 | 0.836733 | 7.872135e-57 | -8.615850e-47 |
| Msa0805550 | Msa1125720 | 0.815290 | 9.971400e-52 | -8.615850e-47 |
| Msa0820770 | Msa1125720 | 0.817400 | 3.363491e-52 | -8.615850e-47 |
| Msa0126370 | Msa1125720 | 0.800406 | 1.463053e-48 | -8.615850e-47 |
| Msa0151180 | Msa1125720 | 0.820574 | 6.383891e-53 | -8.615850e-47 |
| Msa0205510 | Msa1125720 | 0.807797 | 4.241153e-50 | -8.615850e-47 |
| Msa0431690 | Msa1125720 | 0.801823 | 7.506102e-49 | -8.615850e-47 |
| Msa1004550 | Msa1125720 | 0.802742 | 4.855132e-49 | -8.615850e-47 |
| Msa1023920 | Msa1125720 | 0.811429 | 7.033575e-51 | -8.615850e-47 |
| Msa1084430 | Msa1125720 | 0.926657 | 3.468560e-91 | -8.615850e-47 |
| Msa0287410 | Msa1125720 | 0.814183 | 1.754270e-51 | -8.615850e-47 |
| Msa0334360 | Msa1125720 | 0.806539 | 7.830880e-50 | -8.615850e-47 |
| Msa0363790 | Msa1125720 | 0.803584 | 3.252010e-49 | -8.615850e-47 |
| Msa1107900 | Msa1125720 | 0.808954 | 2.402807e-50 | -8.615850e-47 |
| Msa1125400 | Msa1125720 | 0.933978 | 8.215200e-96 | -8.615850e-47 |
| Msa1125660 | Msa1125720 | 0.972770 | 2.600158e-135 | -8.615850e-47 |
| Msa1125680 | Msa1125720 | 0.934266 | 5.267972e-96 | -8.615850e-47 |
| Msa1125720 | Msa1151720 | 0.826167 | 3.147498e-54 | -8.615850e-47 |
| Msa1125720 | Msa1170170 | 0.890567 | 8.764942e-74 | -8.615850e-47 |
| Msa1125720 | Msa1171400 | 0.934607 | 3.105560e-96 | -8.615850e-47 |
| Msa1125720 | Msa1292400 | 0.811856 | 5.679818e-51 | -8.615850e-47 |
| Msa1125720 | Msa1451970 | 0.842406 | 2.636432e-58 | -8.615850e-47 |
| Msa1125720 | Msa1452240 | 0.825480 | 4.581132e-54 | -8.615850e-47 |
| Msa1125720 | Msa1462290 | 0.802373 | 5.786956e-49 | -8.615850e-47 |
| Msa0861090 | Msa1125720 | 0.810205 | 1.293996e-50 | -8.615850e-47 |
| Msa0933230 | Msa1125720 | 0.800131 | 1.664431e-48 | -8.615850e-47 |
| Msa0966400 | Msa1125720 | 0.832329 | 1.006087e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125720 | MtrunA17_Chr7g0266441 | 95.515 | 379 | 15 | 1 | 1 | 379 | 1 | 377 | 0.0 | 725 |
| Msa1125720 | MtrunA17_Chr1g0178491 | 64.042 | 381 | 125 | 6 | 2 | 377 | 1 | 374 | 5.40e-173 | 487 |
| Msa1125720 | MtrunA17_Chr7g0266431 | 87.234 | 188 | 23 | 1 | 189 | 375 | 2 | 189 | 8.98e-120 | 344 |
| Msa1125720 | MtrunA17_Chr7g0266421 | 86.667 | 90 | 12 | 0 | 14 | 103 | 10 | 99 | 1.78e-48 | 160 |
| Msa1125720 | MtrunA17_Chr3g0143611 | 25.826 | 333 | 185 | 14 | 34 | 329 | 5 | 312 | 7.78e-14 | 72.0 |
| Msa1125720 | MtrunA17_Chr2g0294691 | 29.814 | 161 | 101 | 5 | 214 | 371 | 43 | 194 | 7.88e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1125720 | AT1G57790.1 | 44.789 | 355 | 182 | 6 | 24 | 374 | 3 | 347 | 3.45e-101 | 303 |
| Msa1125720 | AT3G56470.1 | 41.880 | 351 | 179 | 7 | 32 | 376 | 27 | 358 | 3.96e-82 | 255 |
| Msa1125720 | AT4G00893.1 | 39.489 | 352 | 198 | 8 | 33 | 378 | 44 | 386 | 2.06e-79 | 249 |
| Msa1125720 | AT4G10660.1 | 41.000 | 300 | 161 | 6 | 62 | 354 | 3 | 293 | 9.08e-68 | 217 |
| Msa1125720 | AT4G12370.1 | 38.835 | 309 | 170 | 8 | 81 | 379 | 1 | 300 | 1.48e-67 | 216 |
| Msa1125720 | AT1G49360.5 | 34.527 | 391 | 213 | 15 | 8 | 372 | 61 | 434 | 6.97e-52 | 179 |
| Msa1125720 | AT1G49360.1 | 34.527 | 391 | 213 | 15 | 8 | 372 | 84 | 457 | 1.31e-51 | 179 |
| Msa1125720 | AT1G49360.3 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1125720 | AT1G49360.2 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1125720 | AT1G49360.4 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1125720 | AT3G18720.1 | 34.085 | 355 | 189 | 11 | 36 | 374 | 51 | 376 | 2.35e-50 | 173 |
| Msa1125720 | AT4G10695.2 | 43.216 | 199 | 97 | 3 | 46 | 238 | 1 | 189 | 3.88e-48 | 163 |
| Msa1125720 | AT4G10695.1 | 43.216 | 199 | 97 | 3 | 46 | 238 | 1 | 189 | 3.88e-48 | 163 |
| Msa1125720 | AT4G12382.1 | 45.455 | 132 | 66 | 2 | 33 | 164 | 9 | 134 | 1.37e-35 | 127 |
| Msa1125720 | AT4G12382.2 | 45.455 | 132 | 66 | 2 | 33 | 164 | 9 | 134 | 1.37e-35 | 127 |
| Msa1125720 | AT2G44735.1 | 40.260 | 154 | 78 | 5 | 139 | 288 | 109 | 252 | 5.73e-23 | 99.4 |
| Msa1125720 | AT4G10700.1 | 41.270 | 126 | 66 | 3 | 258 | 376 | 119 | 243 | 1.19e-20 | 90.5 |
| Msa1125720 | AT4G10700.1 | 47.312 | 93 | 43 | 2 | 62 | 154 | 3 | 89 | 4.02e-20 | 89.0 |
Find 103 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATCTAACTTGAAAATTAT+TGG | 0.158009 | 7_3:-77200173 | None:intergenic |
| GAACCACCAAAAGACTTTAT+TGG | 0.163822 | 7_3:+77200434 | Msa1125720:CDS |
| CAGAAGTTCTCAAAAGTATT+TGG | 0.184683 | 7_3:-77200407 | None:intergenic |
| TTCCCTAAAGTCCGTTTCTA+TGG | 0.238841 | 7_3:+77200311 | Msa1125720:CDS |
| AGCTAAAATATTTATCTCTT+TGG | 0.254305 | 7_3:+77201729 | Msa1125720:three_prime_UTR |
| CCTATGTACAACCTTCAAAT+AGG | 0.266334 | 7_3:-77201668 | None:intergenic |
| TTTCCATAGAAACGGACTTT+AGG | 0.272121 | 7_3:-77200314 | None:intergenic |
| GATCTAACTTGAAAATTATT+GGG | 0.325599 | 7_3:-77200172 | None:intergenic |
| CTCTCTTTAATCCCTTTACT+AGG | 0.326943 | 7_3:+77199739 | Msa1125720:CDS |
| CAAGTTAGATCTGACACTAA+TGG | 0.329403 | 7_3:+77200184 | Msa1125720:CDS |
| ATCCAGCCAATAAAGTCTTT+TGG | 0.339525 | 7_3:-77200440 | None:intergenic |
| AGAACTCTCTGCTAAGCATT+TGG | 0.351257 | 7_3:-77200066 | None:intergenic |
| TTGACCCACTTGAACGTACT+TGG | 0.354769 | 7_3:+77200021 | Msa1125720:CDS |
| TTCCATAGAAACGGACTTTA+GGG | 0.361226 | 7_3:-77200313 | None:intergenic |
| AACATTCTTCGCATGATGTC+GGG | 0.375799 | 7_3:+77198809 | Msa1125720:exon |
| TCTTGTCTCGGTTGGATGTT+GGG | 0.383783 | 7_3:+77199460 | Msa1125720:CDS |
| CCATGTTTGAGTGAAGCATT+TGG | 0.387770 | 7_3:+77201557 | Msa1125720:three_prime_UTR |
| GCTATAAGCACGTGTTATCC+TGG | 0.393896 | 7_3:+77199879 | Msa1125720:CDS |
| ATGTTCCACAAAAGCATTGC+AGG | 0.397891 | 7_3:-77201792 | None:intergenic |
| GAACTCTCTGCTAAGCATTT+GGG | 0.407425 | 7_3:-77200065 | None:intergenic |
| ATGGTTGGTTATTGCTAAAC+CGG | 0.409750 | 7_3:+77199679 | Msa1125720:CDS |
| GGAATTGTTCTTGTCTCGGT+TGG | 0.421431 | 7_3:+77199452 | Msa1125720:CDS |
| GATTAGCAAAACCTATTTGA+AGG | 0.423915 | 7_3:+77201657 | Msa1125720:three_prime_UTR |
| TTCCCTTGAGTTGCCAGAGT+TGG | 0.426018 | 7_3:+77199629 | Msa1125720:CDS |
| CTGCTTGTCGTGCAGGAACT+AGG | 0.426509 | 7_3:+77201508 | Msa1125720:intron |
| AACAATTCCAAGACTTCAGC+AGG | 0.429634 | 7_3:-77199438 | None:intergenic |
| TTCTTGTCTCGGTTGGATGT+TGG | 0.436225 | 7_3:+77199459 | Msa1125720:CDS |
| TCTTGGAATTGTTCTTGTCT+CGG | 0.438217 | 7_3:+77199448 | Msa1125720:CDS |
| TCTTGTGCTCCAACATCAAC+CGG | 0.442241 | 7_3:+77199813 | Msa1125720:CDS |
| TATTGCTAAACCGGCAGGAC+TGG | 0.447316 | 7_3:+77199688 | Msa1125720:CDS |
| ACAATTTGGAGCTGCAAACA+TGG | 0.451046 | 7_3:+77199406 | Msa1125720:CDS |
| TTCGCATGATGTCGGGGAAA+AGG | 0.455236 | 7_3:+77198816 | Msa1125720:exon |
| CTCTGGCAACTCAAGGGAAT+AGG | 0.460842 | 7_3:-77199625 | None:intergenic |
| CGATCTCCCTGCTGAAGTCT+TGG | 0.469551 | 7_3:+77199431 | Msa1125720:CDS |
| AAAGAGGTGAGAACACTAGA+TGG | 0.470190 | 7_3:+77200212 | Msa1125720:CDS |
| GAATAGGTCTTACGCTGCAC+AGG | 0.470767 | 7_3:-77199609 | None:intergenic |
| TCTCTTTAATCCCTTTACTA+GGG | 0.471216 | 7_3:+77199740 | Msa1125720:CDS |
| ATGTGGTCCTTTGATGTCAC+AGG | 0.471463 | 7_3:+77201618 | Msa1125720:three_prime_UTR |
| TGATATGTCCTGTCAAACTT+TGG | 0.477303 | 7_3:-77199777 | None:intergenic |
| GAAAATTAATATAACACATC+CGG | 0.478730 | 7_3:-77199832 | None:intergenic |
| AATACATAAGCCAAGGTGAT+TGG | 0.482476 | 7_3:-77199551 | None:intergenic |
| CTTGAGTTGCCAGAGTTGGA+TGG | 0.483726 | 7_3:+77199633 | Msa1125720:CDS |
| CCTGTCACGACACTGCTCAC+TGG | 0.484710 | 7_3:-77200378 | None:intergenic |
| GTGATCAGATCCCTAGTAAA+GGG | 0.491655 | 7_3:-77199750 | None:intergenic |
| CTGTCACGACACTGCTCACT+GGG | 0.495007 | 7_3:-77200377 | None:intergenic |
| CACCAAAAGACTTTATTGGC+TGG | 0.495682 | 7_3:+77200438 | Msa1125720:CDS |
| CTGAGCGACAGAGGTTGGCT+AGG | 0.495793 | 7_3:+77199993 | Msa1125720:CDS |
| TGAGCGACAGAGGTTGGCTA+GGG | 0.496901 | 7_3:+77199994 | Msa1125720:CDS |
| CCAACCTCCGCCAGTCCTGC+CGG | 0.497826 | 7_3:-77199698 | None:intergenic |
| CCAGTGAGCAGTGTCGTGAC+AGG | 0.497864 | 7_3:+77200378 | Msa1125720:CDS |
| CGTGTTTGCTATACAAAAGA+TGG | 0.502296 | 7_3:+77199660 | Msa1125720:CDS |
| CTATAAGCACGTGTTATCCT+GGG | 0.505414 | 7_3:+77199880 | Msa1125720:CDS |
| CAGGACTGGCGGAGGTTGGA+CGG | 0.511557 | 7_3:+77199702 | Msa1125720:CDS |
| CTTCAGCTGTTTGCAAGAGA+TGG | 0.513153 | 7_3:+77199496 | Msa1125720:CDS |
| CCTATTTGAAGGTTGTACAT+AGG | 0.514646 | 7_3:+77201668 | Msa1125720:three_prime_UTR |
| CCGGCAGGACTGGCGGAGGT+TGG | 0.523905 | 7_3:+77199698 | Msa1125720:CDS |
| ATTGTCTGAGCGACAGAGGT+TGG | 0.524197 | 7_3:+77199988 | Msa1125720:CDS |
| CAAGACTTCAGCAGGGAGAT+CGG | 0.525981 | 7_3:-77199430 | None:intergenic |
| CATTCTAGGACTTACGTCAC+TGG | 0.528125 | 7_3:+77200266 | Msa1125720:CDS |
| TTGGTTATTGCTAAACCGGC+AGG | 0.529301 | 7_3:+77199683 | Msa1125720:CDS |
| CGTGATCAGATCCCTAGTAA+AGG | 0.536285 | 7_3:-77199751 | None:intergenic |
| TCACGCTGCCAAAGTTTGAC+AGG | 0.539518 | 7_3:+77199769 | Msa1125720:CDS |
| CCAAATGCTTCACTCAAACA+TGG | 0.541352 | 7_3:-77201557 | None:intergenic |
| GTCACTGGAATAATGAGAAA+CGG | 0.542182 | 7_3:+77200281 | Msa1125720:CDS |
| TAGATCTGACACTAATGGAA+TGG | 0.542919 | 7_3:+77200189 | Msa1125720:CDS |
| TCTGCTAAGCATTTGGGCGG+AGG | 0.544418 | 7_3:-77200059 | None:intergenic |
| CAACATTCTTCGCATGATGT+CGG | 0.545714 | 7_3:+77198808 | Msa1125720:exon |
| TTTGCTATACAAAAGATGGT+TGG | 0.546454 | 7_3:+77199664 | Msa1125720:CDS |
| CATCCAACTCTGGCAACTCA+AGG | 0.553068 | 7_3:-77199632 | None:intergenic |
| ATAACACATCCGGTTGATGT+TGG | 0.553987 | 7_3:-77199822 | None:intergenic |
| TTGAAATATTAAGAAATCAA+CGG | 0.556920 | 7_3:-77201884 | None:intergenic |
| TTTGGGAAATACATAAGCCA+AGG | 0.561817 | 7_3:-77199558 | None:intergenic |
| CATAGGAAGTTAATATGTGA+AGG | 0.564276 | 7_3:+77201685 | Msa1125720:three_prime_UTR |
| GACACTAATGGAATGGAAAG+AGG | 0.564517 | 7_3:+77200196 | Msa1125720:CDS |
| TGATGTTGGAGCACAAGAGA+AGG | 0.568366 | 7_3:-77199808 | None:intergenic |
| TGCTAAACCGGCAGGACTGG+CGG | 0.569550 | 7_3:+77199691 | Msa1125720:CDS |
| CAATAGAAGAGCTGCTGCTG+AGG | 0.574535 | 7_3:+77199374 | Msa1125720:CDS |
| ACACGACATCCATCCAACTC+TGG | 0.576746 | 7_3:-77199642 | None:intergenic |
| CTTGTCTCGGTTGGATGTTG+GGG | 0.581584 | 7_3:+77199461 | Msa1125720:CDS |
| CTCTAAACCTGTGACATCAA+AGG | 0.581595 | 7_3:-77201625 | None:intergenic |
| AGGAATGAATATCTGTGAGT+AGG | 0.583262 | 7_3:+77201705 | Msa1125720:three_prime_UTR |
| GTGATTCTTCATGCAAAATG+TGG | 0.585218 | 7_3:+77201601 | Msa1125720:three_prime_UTR |
| ATCCAACTCTGGCAACTCAA+GGG | 0.590798 | 7_3:-77199631 | None:intergenic |
| TAAACCGGCAGGACTGGCGG+AGG | 0.593956 | 7_3:+77199694 | Msa1125720:CDS |
| ACAGTCCAAGTACGTTCAAG+TGG | 0.603382 | 7_3:-77200026 | None:intergenic |
| CAATTTGGAGCTGCAAACAT+GGG | 0.606485 | 7_3:+77199407 | Msa1125720:CDS |
| GCTCACTGGGATGATATCTA+CGG | 0.610400 | 7_3:-77200364 | None:intergenic |
| GTCGACTACACGTAAAGAAG+TGG | 0.612484 | 7_3:-77199529 | None:intergenic |
| ACATTCTTCGCATGATGTCG+GGG | 0.620719 | 7_3:+77198810 | Msa1125720:exon |
| CAGTGAGCAGTGTCGTGACA+GGG | 0.621223 | 7_3:+77200379 | Msa1125720:CDS |
| AATAGGTCTTACGCTGCACA+GGG | 0.638547 | 7_3:-77199608 | None:intergenic |
| CTCTCTGCTAAGCATTTGGG+CGG | 0.648219 | 7_3:-77200062 | None:intergenic |
| TTTGTAGTTTATATATGTTG+TGG | 0.650518 | 7_3:+77200143 | Msa1125720:CDS |
| AGTTTATATATGTTGTGGTG+AGG | 0.651124 | 7_3:+77200148 | Msa1125720:CDS |
| AGAATCACAAAGAACTCGAG+AGG | 0.661545 | 7_3:-77201586 | None:intergenic |
| GAGCGACAGAGGTTGGCTAG+GGG | 0.671202 | 7_3:+77199995 | Msa1125720:CDS |
| CAGTCCAAGTACGTTCAAGT+GGG | 0.682692 | 7_3:-77200025 | None:intergenic |
| GACCACTGTTAATTATGACG+CGG | 0.704466 | 7_3:+77199914 | Msa1125720:CDS |
| TATAAGCACGTGTTATCCTG+GGG | 0.707016 | 7_3:+77199881 | Msa1125720:CDS |
| ACAATTCCAAGACTTCAGCA+GGG | 0.713188 | 7_3:-77199437 | None:intergenic |
| GTGTAGTCGACCAATCACCT+TGG | 0.718766 | 7_3:+77199541 | Msa1125720:CDS |
| TACCGCGTCATAATTAACAG+TGG | 0.732690 | 7_3:-77199916 | None:intergenic |
| AAATTTATGATAGAGCACAA+AGG | 0.741593 | 7_3:+77200113 | Msa1125720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATCTTATTTTCAAATA+AGG | + | chr7_3:77201370-77201389 | Msa1125720:intron | 10.0% |
| !!! | ATATTTCAATTATATTTTTG+TGG | + | chr7_3:77201898-77201917 | Msa1125720:three_prime_UTR | 10.0% |
| !! | CAATAATAATAATATGTATG+GGG | - | chr7_3:77198893-77198912 | None:intergenic | 15.0% |
| !! | GCAATAATAATAATATGTAT+GGG | - | chr7_3:77198894-77198913 | None:intergenic | 15.0% |
| !! | AGCAATAATAATAATATGTA+TGG | - | chr7_3:77198895-77198914 | None:intergenic | 15.0% |
| !! | TACATATTATTATTATTGCT+AGG | + | chr7_3:77198895-77198914 | Msa1125720:intron | 15.0% |
| !! | ACATATTATTATTATTGCTA+GGG | + | chr7_3:77198896-77198915 | Msa1125720:intron | 15.0% |
| !!! | AATTTTGTTCAACAATTAAT+TGG | + | chr7_3:77198940-77198959 | Msa1125720:intron | 15.0% |
| !! | TTTAGATTGATAAACATATT+TGG | + | chr7_3:77199218-77199237 | Msa1125720:intron | 15.0% |
| !! | GATGTAAAAAAAAAAATTAG+CGG | + | chr7_3:77200460-77200479 | Msa1125720:exon | 15.0% |
| !! | TTGAAATATTAAGAAATCAA+CGG | - | chr7_3:77201887-77201906 | None:intergenic | 15.0% |
| !!! | TCAATTTTTTGGCTTAATAA+TGG | + | chr7_3:77198974-77198993 | Msa1125720:intron | 20.0% |
| !! | TATGATTTCTATATCCAATT+CGG | + | chr7_3:77199033-77199052 | Msa1125720:intron | 20.0% |
| !! | GTTTCATCTATATTTCATAT+TGG | + | chr7_3:77199069-77199088 | Msa1125720:intron | 20.0% |
| !! | GAAAATTAATATAACACATC+CGG | - | chr7_3:77199835-77199854 | None:intergenic | 20.0% |
| !! | TTTGTAGTTTATATATGTTG+TGG | + | chr7_3:77200143-77200162 | Msa1125720:CDS | 20.0% |
| !! | GATCTAACTTGAAAATTATT+GGG | - | chr7_3:77200175-77200194 | None:intergenic | 20.0% |
| !! | AGATCTAACTTGAAAATTAT+TGG | - | chr7_3:77200176-77200195 | None:intergenic | 20.0% |
| !! | AGACTACATATTATAACTAT+TGG | + | chr7_3:77200544-77200563 | Msa1125720:intron | 20.0% |
| !!! | ATTTTTCATTTCCAAAACTA+AGG | - | chr7_3:77200887-77200906 | None:intergenic | 20.0% |
| !!! | TTAGTTTTGGAAATGAAAAA+TGG | + | chr7_3:77200886-77200905 | Msa1125720:intron | 20.0% |
| !!! | TTATTTTCAAATAAGGACTT+GGG | + | chr7_3:77201377-77201396 | Msa1125720:intron | 20.0% |
| !! | AGCTAAAATATTTATCTCTT+TGG | + | chr7_3:77201729-77201748 | Msa1125720:three_prime_UTR | 20.0% |
| ! | ATAATAATATGTATGGGGTT+AGG | - | chr7_3:77198888-77198907 | None:intergenic | 25.0% |
| !!! | TTGCACTAACTTCAATTTTT+TGG | + | chr7_3:77198963-77198982 | Msa1125720:intron | 25.0% |
| ! | CATGAAAAATTTAACCGAAT+TGG | - | chr7_3:77199050-77199069 | None:intergenic | 25.0% |
| ! | TAGTTAATTCACAATAAAGC+TGG | - | chr7_3:77199106-77199125 | None:intergenic | 25.0% |
| !!! | CATTTTTAAGTTGATGATTG+TGG | + | chr7_3:77199127-77199146 | Msa1125720:intron | 25.0% |
| ! | AGATTGATAAACATATTTGG+TGG | + | chr7_3:77199221-77199240 | Msa1125720:intron | 25.0% |
| ! | GATTGATAAACATATTTGGT+GGG | + | chr7_3:77199222-77199241 | Msa1125720:intron | 25.0% |
| ! | CTTATGTATTTCCCAAAAAA+GGG | + | chr7_3:77199564-77199583 | Msa1125720:CDS | 25.0% |
| !!! | CATAACAATTACCCTTTTTT+GGG | - | chr7_3:77199578-77199597 | None:intergenic | 25.0% |
| !!! | TCATAACAATTACCCTTTTT+TGG | - | chr7_3:77199579-77199598 | None:intergenic | 25.0% |
| !! | ATATTAATTTTCAGACGTGT+TGG | + | chr7_3:77199843-77199862 | Msa1125720:CDS | 25.0% |
| !! | ATAAGCTTGTCTTTTCTAAT+GGG | + | chr7_3:77199958-77199977 | Msa1125720:CDS | 25.0% |
| ! | AAATTTATGATAGAGCACAA+AGG | + | chr7_3:77200113-77200132 | Msa1125720:CDS | 25.0% |
| !!! | TTGTGTAGAGCATTTATTTT+TGG | + | chr7_3:77200509-77200528 | Msa1125720:intron | 25.0% |
| !! | TATTGGATACATGCTTTATT+AGG | + | chr7_3:77200561-77200580 | Msa1125720:intron | 25.0% |
| ! | TATTAGGCTGTAAACATTTA+TGG | + | chr7_3:77200577-77200596 | Msa1125720:intron | 25.0% |
| ! | CAATAAGACTAGGAAAATTT+AGG | - | chr7_3:77200656-77200675 | None:intergenic | 25.0% |
| ! | TGAGTTATATGCAAATCTTA+AGG | + | chr7_3:77200723-77200742 | Msa1125720:intron | 25.0% |
| !!! | CACTAGTTTGTTGTAAAAAT+TGG | + | chr7_3:77201002-77201021 | Msa1125720:intron | 25.0% |
| !! | TTTAACTTCAATCGAGATTA+TGG | - | chr7_3:77201069-77201088 | None:intergenic | 25.0% |
| !! | AGGGTATTCTATAAAATAAG+AGG | - | chr7_3:77201170-77201189 | None:intergenic | 25.0% |
| ! | GATAGTTTGGAAAATATAGT+CGG | + | chr7_3:77201227-77201246 | Msa1125720:intron | 25.0% |
| !!! | CTTATTTTCAAATAAGGACT+TGG | + | chr7_3:77201376-77201395 | Msa1125720:intron | 25.0% |
| ! | AGAAAAAGATATGATCAAAC+AGG | - | chr7_3:77201464-77201483 | None:intergenic | 25.0% |
| TTGTTGAACAAAATTGAGAG+TGG | - | chr7_3:77198935-77198954 | None:intergenic | 30.0% | |
| AAAAAATGAAGTTAGCTAGC+AGG | - | chr7_3:77199289-77199308 | None:intergenic | 30.0% | |
| TGAGGTAAAAAGCAACAATT+TGG | + | chr7_3:77199392-77199411 | Msa1125720:CDS | 30.0% | |
| GCTTATGTATTTCCCAAAAA+AGG | + | chr7_3:77199563-77199582 | Msa1125720:CDS | 30.0% | |
| ! | TTTGCTATACAAAAGATGGT+TGG | + | chr7_3:77199664-77199683 | Msa1125720:CDS | 30.0% |
| TCTCTTTAATCCCTTTACTA+GGG | + | chr7_3:77199740-77199759 | Msa1125720:CDS | 30.0% | |
| ! | GATAAGCTTGTCTTTTCTAA+TGG | + | chr7_3:77199957-77199976 | Msa1125720:CDS | 30.0% |
| AGTTTATATATGTTGTGGTG+AGG | + | chr7_3:77200148-77200167 | Msa1125720:CDS | 30.0% | |
| !!! | GTTTTTTGTCATCTCATTCT+AGG | + | chr7_3:77200252-77200271 | Msa1125720:CDS | 30.0% |
| !! | CAGAAGTTCTCAAAAGTATT+TGG | - | chr7_3:77200410-77200429 | None:intergenic | 30.0% |
| !! | CAAATACTTTTGAGAACTTC+TGG | + | chr7_3:77200408-77200427 | Msa1125720:CDS | 30.0% |
| TTGTAGCTAACAATAAGACT+AGG | - | chr7_3:77200666-77200685 | None:intergenic | 30.0% | |
| AAATCTTAAGGTTTCTCCAA+TGG | + | chr7_3:77200735-77200754 | Msa1125720:intron | 30.0% | |
| ! | ATGTTCATGATCCTTAGTTT+TGG | + | chr7_3:77200873-77200892 | Msa1125720:intron | 30.0% |
| ! | ATTTTATAGAATACCCTTGC+AGG | + | chr7_3:77201173-77201192 | Msa1125720:intron | 30.0% |
| ! | CTATATTTTCCAAACTATCG+AGG | - | chr7_3:77201226-77201245 | None:intergenic | 30.0% |
| ACTGGTATATGATTGCTAAA+TGG | + | chr7_3:77201279-77201298 | Msa1125720:intron | 30.0% | |
| ! | ATTTTGCCTGTTTGATCAAA+TGG | + | chr7_3:77201323-77201342 | Msa1125720:intron | 30.0% |
| GATTAGCAAAACCTATTTGA+AGG | + | chr7_3:77201657-77201676 | Msa1125720:three_prime_UTR | 30.0% | |
| CATAGGAAGTTAATATGTGA+AGG | + | chr7_3:77201685-77201704 | Msa1125720:three_prime_UTR | 30.0% | |
| GGAGAAAAATCTTGAAATTC+AGG | - | chr7_3:77201774-77201793 | None:intergenic | 30.0% | |
| ATATGTATGGGGTTAGGTTA+GGG | - | chr7_3:77198882-77198901 | None:intergenic | 35.0% | |
| AATATGTATGGGGTTAGGTT+AGG | - | chr7_3:77198883-77198902 | None:intergenic | 35.0% | |
| ATTCACAATAAAGCTGGTCA+TGG | - | chr7_3:77199100-77199119 | None:intergenic | 35.0% | |
| GTAAACAGAACAGAAACAGT+GGG | - | chr7_3:77199183-77199202 | None:intergenic | 35.0% | |
| AGTAAACAGAACAGAAACAG+TGG | - | chr7_3:77199184-77199203 | None:intergenic | 35.0% | |
| ! | GATAAACATATTTGGTGGGA+TGG | + | chr7_3:77199226-77199245 | Msa1125720:intron | 35.0% |
| TCTTGGAATTGTTCTTGTCT+CGG | + | chr7_3:77199448-77199467 | Msa1125720:CDS | 35.0% | |
| AATACATAAGCCAAGGTGAT+TGG | - | chr7_3:77199554-77199573 | None:intergenic | 35.0% | |
| TTTGGGAAATACATAAGCCA+AGG | - | chr7_3:77199561-77199580 | None:intergenic | 35.0% | |
| !! | CGTGTTTGCTATACAAAAGA+TGG | + | chr7_3:77199660-77199679 | Msa1125720:CDS | 35.0% |
| ! | ATGGTTGGTTATTGCTAAAC+CGG | + | chr7_3:77199679-77199698 | Msa1125720:CDS | 35.0% |
| CTCTCTTTAATCCCTTTACT+AGG | + | chr7_3:77199739-77199758 | Msa1125720:CDS | 35.0% | |
| TGATATGTCCTGTCAAACTT+TGG | - | chr7_3:77199780-77199799 | None:intergenic | 35.0% | |
| CAAGTTAGATCTGACACTAA+TGG | + | chr7_3:77200184-77200203 | Msa1125720:CDS | 35.0% | |
| TAGATCTGACACTAATGGAA+TGG | + | chr7_3:77200189-77200208 | Msa1125720:CDS | 35.0% | |
| GTCACTGGAATAATGAGAAA+CGG | + | chr7_3:77200281-77200300 | Msa1125720:CDS | 35.0% | |
| ! | TTCCATAGAAACGGACTTTA+GGG | - | chr7_3:77200316-77200335 | None:intergenic | 35.0% |
| ! | TTTCCATAGAAACGGACTTT+AGG | - | chr7_3:77200317-77200336 | None:intergenic | 35.0% |
| ! | TGCAACGTTTTCCATAGAAA+CGG | - | chr7_3:77200325-77200344 | None:intergenic | 35.0% |
| GAACCACCAAAAGACTTTAT+TGG | + | chr7_3:77200434-77200453 | Msa1125720:CDS | 35.0% | |
| ! | ATCCAGCCAATAAAGTCTTT+TGG | - | chr7_3:77200443-77200462 | None:intergenic | 35.0% |
| GTAAACATTTATGGAGCTAC+TGG | + | chr7_3:77200586-77200605 | Msa1125720:intron | 35.0% | |
| GAATAAGATTGCATGCATCA+TGG | - | chr7_3:77200699-77200718 | None:intergenic | 35.0% | |
| ACTAATGCACATGTAACCAT+TGG | - | chr7_3:77200754-77200773 | None:intergenic | 35.0% | |
| ! | GACAGAGTACAATTTTGCTA+TGG | + | chr7_3:77200822-77200841 | Msa1125720:intron | 35.0% |
| TGAAAAATGGTCAGAGTTAG+AGG | + | chr7_3:77200899-77200918 | Msa1125720:intron | 35.0% | |
| ACACACATGACTTTCTATGA+TGG | - | chr7_3:77201036-77201055 | None:intergenic | 35.0% | |
| ! | ATTTTCCAAACTATCGAGGA+TGG | - | chr7_3:77201222-77201241 | None:intergenic | 35.0% |
| ATCCAACCATTTGATCAAAC+AGG | - | chr7_3:77201332-77201351 | None:intergenic | 35.0% | |
| GTGATTCTTCATGCAAAATG+TGG | + | chr7_3:77201601-77201620 | Msa1125720:three_prime_UTR | 35.0% | |
| CCTATGTACAACCTTCAAAT+AGG | - | chr7_3:77201671-77201690 | None:intergenic | 35.0% | |
| CCTATTTGAAGGTTGTACAT+AGG | + | chr7_3:77201668-77201687 | Msa1125720:three_prime_UTR | 35.0% | |
| AGGAATGAATATCTGTGAGT+AGG | + | chr7_3:77201705-77201724 | Msa1125720:three_prime_UTR | 35.0% | |
| CAACATTCTTCGCATGATGT+CGG | + | chr7_3:77198808-77198827 | Msa1125720:exon | 40.0% | |
| AACATTCTTCGCATGATGTC+GGG | + | chr7_3:77198809-77198828 | Msa1125720:exon | 40.0% | |
| ! | ACAATTTGGAGCTGCAAACA+TGG | + | chr7_3:77199406-77199425 | Msa1125720:CDS | 40.0% |
| ! | CAATTTGGAGCTGCAAACAT+GGG | + | chr7_3:77199407-77199426 | Msa1125720:CDS | 40.0% |
| ACAATTCCAAGACTTCAGCA+GGG | - | chr7_3:77199440-77199459 | None:intergenic | 40.0% | |
| AACAATTCCAAGACTTCAGC+AGG | - | chr7_3:77199441-77199460 | None:intergenic | 40.0% | |
| GTGATCAGATCCCTAGTAAA+GGG | - | chr7_3:77199753-77199772 | None:intergenic | 40.0% | |
| ! | ATAACACATCCGGTTGATGT+TGG | - | chr7_3:77199825-77199844 | None:intergenic | 40.0% |
| CTATAAGCACGTGTTATCCT+GGG | + | chr7_3:77199880-77199899 | Msa1125720:CDS | 40.0% | |
| TATAAGCACGTGTTATCCTG+GGG | + | chr7_3:77199881-77199900 | Msa1125720:CDS | 40.0% | |
| GTTATCCTGGGGAAAAAGAA+TGG | + | chr7_3:77199892-77199911 | Msa1125720:CDS | 40.0% | |
| GACCACTGTTAATTATGACG+CGG | + | chr7_3:77199914-77199933 | Msa1125720:CDS | 40.0% | |
| TACCGCGTCATAATTAACAG+TGG | - | chr7_3:77199919-77199938 | None:intergenic | 40.0% | |
| ! | TTTTATTGTCTGAGCGACAG+AGG | + | chr7_3:77199984-77200003 | Msa1125720:CDS | 40.0% |
| GAACTCTCTGCTAAGCATTT+GGG | - | chr7_3:77200068-77200087 | None:intergenic | 40.0% | |
| AGAACTCTCTGCTAAGCATT+TGG | - | chr7_3:77200069-77200088 | None:intergenic | 40.0% | |
| AGAGTTCTACTGCCAAAAAC+TGG | + | chr7_3:77200081-77200100 | Msa1125720:CDS | 40.0% | |
| GACACTAATGGAATGGAAAG+AGG | + | chr7_3:77200196-77200215 | Msa1125720:CDS | 40.0% | |
| AAAGAGGTGAGAACACTAGA+TGG | + | chr7_3:77200212-77200231 | Msa1125720:CDS | 40.0% | |
| TTCCCTAAAGTCCGTTTCTA+TGG | + | chr7_3:77200311-77200330 | Msa1125720:CDS | 40.0% | |
| ! | CAGCCAATAAAGTCTTTTGG+TGG | - | chr7_3:77200440-77200459 | None:intergenic | 40.0% |
| CACCAAAAGACTTTATTGGC+TGG | + | chr7_3:77200438-77200457 | Msa1125720:CDS | 40.0% | |
| AGTAGCATCTCCAATGTTGT+TGG | + | chr7_3:77200771-77200790 | Msa1125720:intron | 40.0% | |
| GTACTCAGTACCAACAACAT+TGG | - | chr7_3:77200784-77200803 | None:intergenic | 40.0% | |
| TTCTTTAGTCTGTGCTGAAC+TGG | + | chr7_3:77201261-77201280 | Msa1125720:intron | 40.0% | |
| TGCCTGTTTGATCAAATGGT+TGG | + | chr7_3:77201327-77201346 | Msa1125720:intron | 40.0% | |
| CCAAATGCTTCACTCAAACA+TGG | - | chr7_3:77201560-77201579 | None:intergenic | 40.0% | |
| ! | CCATGTTTGAGTGAAGCATT+TGG | + | chr7_3:77201557-77201576 | Msa1125720:three_prime_UTR | 40.0% |
| AGAATCACAAAGAACTCGAG+AGG | - | chr7_3:77201589-77201608 | None:intergenic | 40.0% | |
| CTCTAAACCTGTGACATCAA+AGG | - | chr7_3:77201628-77201647 | None:intergenic | 40.0% | |
| ! | TTTCTCCTGCAATGCTTTTG+TGG | + | chr7_3:77201787-77201806 | Msa1125720:three_prime_UTR | 40.0% |
| !! | ATGTTCCACAAAAGCATTGC+AGG | - | chr7_3:77201795-77201814 | None:intergenic | 40.0% |
| ACATTCTTCGCATGATGTCG+GGG | + | chr7_3:77198810-77198829 | Msa1125720:exon | 45.0% | |
| GGAATTGTTCTTGTCTCGGT+TGG | + | chr7_3:77199452-77199471 | Msa1125720:CDS | 45.0% | |
| TTCTTGTCTCGGTTGGATGT+TGG | + | chr7_3:77199459-77199478 | Msa1125720:CDS | 45.0% | |
| TCTTGTCTCGGTTGGATGTT+GGG | + | chr7_3:77199460-77199479 | Msa1125720:CDS | 45.0% | |
| CTTCAGCTGTTTGCAAGAGA+TGG | + | chr7_3:77199496-77199515 | Msa1125720:CDS | 45.0% | |
| GTCGACTACACGTAAAGAAG+TGG | - | chr7_3:77199532-77199551 | None:intergenic | 45.0% | |
| AATAGGTCTTACGCTGCACA+GGG | - | chr7_3:77199611-77199630 | None:intergenic | 45.0% | |
| ATCCAACTCTGGCAACTCAA+GGG | - | chr7_3:77199634-77199653 | None:intergenic | 45.0% | |
| TTGGTTATTGCTAAACCGGC+AGG | + | chr7_3:77199683-77199702 | Msa1125720:CDS | 45.0% | |
| CGTGATCAGATCCCTAGTAA+AGG | - | chr7_3:77199754-77199773 | None:intergenic | 45.0% | |
| TGATGTTGGAGCACAAGAGA+AGG | - | chr7_3:77199811-77199830 | None:intergenic | 45.0% | |
| TCTTGTGCTCCAACATCAAC+CGG | + | chr7_3:77199813-77199832 | Msa1125720:CDS | 45.0% | |
| GCTATAAGCACGTGTTATCC+TGG | + | chr7_3:77199879-77199898 | Msa1125720:CDS | 45.0% | |
| TTGACCCACTTGAACGTACT+TGG | + | chr7_3:77200021-77200040 | Msa1125720:CDS | 45.0% | |
| CAGTCCAAGTACGTTCAAGT+GGG | - | chr7_3:77200028-77200047 | None:intergenic | 45.0% | |
| ACAGTCCAAGTACGTTCAAG+TGG | - | chr7_3:77200029-77200048 | None:intergenic | 45.0% | |
| TACTGCCAAAAACTGGTCGA+AGG | + | chr7_3:77200088-77200107 | Msa1125720:CDS | 45.0% | |
| ACTGCCAAAAACTGGTCGAA+GGG | + | chr7_3:77200089-77200108 | Msa1125720:CDS | 45.0% | |
| ! | TTTCCCCTTCGACCAGTTTT+TGG | - | chr7_3:77200096-77200115 | None:intergenic | 45.0% |
| !! | CATTCTAGGACTTACGTCAC+TGG | + | chr7_3:77200266-77200285 | Msa1125720:CDS | 45.0% |
| GCTCACTGGGATGATATCTA+CGG | - | chr7_3:77200367-77200386 | None:intergenic | 45.0% | |
| ! | GTTTTCATCAACGCCTGCAA+GGG | - | chr7_3:77201189-77201208 | None:intergenic | 45.0% |
| TTCCAAACTATCGAGGATGG+AGG | - | chr7_3:77201219-77201238 | None:intergenic | 45.0% | |
| ATGTGGTCCTTTGATGTCAC+AGG | + | chr7_3:77201618-77201637 | Msa1125720:three_prime_UTR | 45.0% | |
| !!! | TAATATTTTTTATAAAAAGT+TGG | + | chr7_3:77201107-77201126 | Msa1125720:intron | 5.0% |
| !!! | AATATTTTTTATAAAAAGTT+GGG | + | chr7_3:77201108-77201127 | Msa1125720:intron | 5.0% |
| TTCGCATGATGTCGGGGAAA+AGG | + | chr7_3:77198816-77198835 | Msa1125720:exon | 50.0% | |
| CAATAGAAGAGCTGCTGCTG+AGG | + | chr7_3:77199374-77199393 | Msa1125720:CDS | 50.0% | |
| CAAGACTTCAGCAGGGAGAT+CGG | - | chr7_3:77199433-77199452 | None:intergenic | 50.0% | |
| CTTGTCTCGGTTGGATGTTG+GGG | + | chr7_3:77199461-77199480 | Msa1125720:CDS | 50.0% | |
| GTGTAGTCGACCAATCACCT+TGG | + | chr7_3:77199541-77199560 | Msa1125720:CDS | 50.0% | |
| GAATAGGTCTTACGCTGCAC+AGG | - | chr7_3:77199612-77199631 | None:intergenic | 50.0% | |
| CTCTGGCAACTCAAGGGAAT+AGG | - | chr7_3:77199628-77199647 | None:intergenic | 50.0% | |
| ! | TTCCCTTGAGTTGCCAGAGT+TGG | + | chr7_3:77199629-77199648 | Msa1125720:CDS | 50.0% |
| CATCCAACTCTGGCAACTCA+AGG | - | chr7_3:77199635-77199654 | None:intergenic | 50.0% | |
| ! | CTTGAGTTGCCAGAGTTGGA+TGG | + | chr7_3:77199633-77199652 | Msa1125720:CDS | 50.0% |
| ACACGACATCCATCCAACTC+TGG | - | chr7_3:77199645-77199664 | None:intergenic | 50.0% | |
| TATTGCTAAACCGGCAGGAC+TGG | + | chr7_3:77199688-77199707 | Msa1125720:CDS | 50.0% | |
| TCACGCTGCCAAAGTTTGAC+AGG | + | chr7_3:77199769-77199788 | Msa1125720:CDS | 50.0% | |
| ! | GTGGTCCATTCTTTTTCCCC+AGG | - | chr7_3:77199900-77199919 | None:intergenic | 50.0% |
| ATTGTCTGAGCGACAGAGGT+TGG | + | chr7_3:77199988-77200007 | Msa1125720:CDS | 50.0% | |
| CTCTCTGCTAAGCATTTGGG+CGG | - | chr7_3:77200065-77200084 | None:intergenic | 50.0% | |
| CTGCCAAAAACTGGTCGAAG+GGG | + | chr7_3:77200090-77200109 | Msa1125720:CDS | 50.0% | |
| ! | GGTTTTCATCAACGCCTGCA+AGG | - | chr7_3:77201190-77201209 | None:intergenic | 50.0% |
| ! | TATCGAGGATGGAGGTGTGT+GGG | - | chr7_3:77201211-77201230 | None:intergenic | 50.0% |
| CACCTCCATCCTCGATAGTT+TGG | + | chr7_3:77201214-77201233 | Msa1125720:intron | 50.0% | |
| TAGTTCCTGCACGACAAGCA+GGG | - | chr7_3:77201509-77201528 | None:intergenic | 50.0% | |
| CGATCTCCCTGCTGAAGTCT+TGG | + | chr7_3:77199431-77199450 | Msa1125720:CDS | 55.0% | |
| ! | TGAGCGACAGAGGTTGGCTA+GGG | + | chr7_3:77199994-77200013 | Msa1125720:CDS | 55.0% |
| TCTGCTAAGCATTTGGGCGG+AGG | - | chr7_3:77200062-77200081 | None:intergenic | 55.0% | |
| CTGTCACGACACTGCTCACT+GGG | - | chr7_3:77200380-77200399 | None:intergenic | 55.0% | |
| CAGTGAGCAGTGTCGTGACA+GGG | + | chr7_3:77200379-77200398 | Msa1125720:CDS | 55.0% | |
| ! | CTATCGAGGATGGAGGTGTG+TGG | - | chr7_3:77201212-77201231 | None:intergenic | 55.0% |
| CTAGTTCCTGCACGACAAGC+AGG | - | chr7_3:77201510-77201529 | None:intergenic | 55.0% | |
| CTGCTTGTCGTGCAGGAACT+AGG | + | chr7_3:77201508-77201527 | Msa1125720:intron | 55.0% | |
| TGCTAAACCGGCAGGACTGG+CGG | + | chr7_3:77199691-77199710 | Msa1125720:CDS | 60.0% | |
| ! | CTGAGCGACAGAGGTTGGCT+AGG | + | chr7_3:77199993-77200012 | Msa1125720:CDS | 60.0% |
| ! | GAGCGACAGAGGTTGGCTAG+GGG | + | chr7_3:77199995-77200014 | Msa1125720:CDS | 60.0% |
| CCTGTCACGACACTGCTCAC+TGG | - | chr7_3:77200381-77200400 | None:intergenic | 60.0% | |
| CCAGTGAGCAGTGTCGTGAC+AGG | + | chr7_3:77200378-77200397 | Msa1125720:CDS | 60.0% | |
| GACTTCCCTGCTTGTCGTGC+AGG | + | chr7_3:77201501-77201520 | Msa1125720:intron | 60.0% | |
| ! | TAAACCGGCAGGACTGGCGG+AGG | + | chr7_3:77199694-77199713 | Msa1125720:CDS | 65.0% |
| ! | CAGGACTGGCGGAGGTTGGA+CGG | + | chr7_3:77199702-77199721 | Msa1125720:CDS | 65.0% |
| CCAACCTCCGCCAGTCCTGC+CGG | - | chr7_3:77199701-77199720 | None:intergenic | 70.0% | |
| ! | CCGGCAGGACTGGCGGAGGT+TGG | + | chr7_3:77199698-77199717 | Msa1125720:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 77198788 | 77201922 | 77198788 | ID=Msa1125720;Name=Msa1125720 |
| chr7_3 | mRNA | 77198788 | 77201922 | 77198788 | ID=Msa1125720-mRNA-1;Parent=Msa1125720;Name=Msa1125720-mRNA-1;_AED=0.02;_eAED=0.02;_QI=33|1|1|1|0.5|0.33|3|421|379 |
| chr7_3 | exon | 77198788 | 77198858 | 77198788 | ID=Msa1125720-mRNA-1:exon:21223;Parent=Msa1125720-mRNA-1 |
| chr7_3 | exon | 77199365 | 77200487 | 77199365 | ID=Msa1125720-mRNA-1:exon:21224;Parent=Msa1125720-mRNA-1 |
| chr7_3 | exon | 77201523 | 77201922 | 77201523 | ID=Msa1125720-mRNA-1:exon:21225;Parent=Msa1125720-mRNA-1 |
| chr7_3 | five_prime_UTR | 77198788 | 77198820 | 77198788 | ID=Msa1125720-mRNA-1:five_prime_utr;Parent=Msa1125720-mRNA-1 |
| chr7_3 | CDS | 77198821 | 77198858 | 77198821 | ID=Msa1125720-mRNA-1:cds;Parent=Msa1125720-mRNA-1 |
| chr7_3 | CDS | 77199365 | 77200466 | 77199365 | ID=Msa1125720-mRNA-1:cds;Parent=Msa1125720-mRNA-1 |
| chr7_3 | three_prime_UTR | 77200467 | 77200487 | 77200467 | ID=Msa1125720-mRNA-1:three_prime_utr;Parent=Msa1125720-mRNA-1 |
| chr7_3 | three_prime_UTR | 77201523 | 77201922 | 77201523 | ID=Msa1125720-mRNA-1:three_prime_utr;Parent=Msa1125720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
