AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1107900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107900 MtrunA17_Chr7g0241611 97.681 690 16 0 1 690 1 690 0.0 1399
Msa1107900 MtrunA17_Chr4g0005821 79.046 692 129 6 1 687 1 681 0.0 1078
Msa1107900 MtrunA17_Chr7g0259681 63.084 642 215 9 57 690 8 635 0.0 803
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1107900 AT3G09100.2 66.619 695 204 9 1 690 1 672 0.0 910
Msa1107900 AT5G01290.1 63.768 690 213 11 5 690 1 657 0.0 850
Msa1107900 AT5G28210.1 56.053 603 224 16 98 690 48 619 0.0 643
Msa1107900 AT3G09100.1 64.435 478 148 5 1 474 1 460 0.0 605

Find 192 sgRNAs with CRISPR-Local

Find 694 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTCCATCATATGATTTA+AGG 0.113031 7_3:+50248249 None:intergenic
TATATGACATGGAGCCTTTC+AGG 0.186417 7_3:-50242341 Msa1107900:CDS
CTGCTTTCAGATACTCAAAT+TGG 0.211849 7_3:-50245183 Msa1107900:CDS
ATGATTTAAGGATCTTATTA+TGG 0.232235 7_3:+50248261 None:intergenic
AATGACAAACGATGATGTTT+TGG 0.244746 7_3:-50245249 Msa1107900:CDS
TCAGACCCCATGCTTTATTC+TGG 0.261086 7_3:-50240731 Msa1107900:CDS
CTAGATGAATAGTTAGGTTT+AGG 0.263899 7_3:-50240184 Msa1107900:three_prime_UTR
ATGGTACCGTTCATGATTCC+TGG 0.271885 7_3:+50242383 None:intergenic
CCACTTTCTATGTGCTCTTC+TGG 0.283156 7_3:+50249242 None:intergenic
TTTCGGCATGATACCTTCTA+AGG 0.285277 7_3:-50247660 Msa1107900:CDS
ACTTAACAAAGAAAATTATA+AGG 0.289803 7_3:+50240144 None:intergenic
CGCAGATGGTCTCATATTTC+AGG 0.293837 7_3:-50242151 Msa1107900:intron
AACCGATACCGCTCAAATTC+AGG 0.297547 7_3:-50240231 Msa1107900:three_prime_UTR
GAGAGAGAAGTGTAACTATA+AGG 0.300832 7_3:+50250183 None:intergenic
GCAGGACAGACTATCGTTTC+AGG 0.301819 7_3:+50246347 None:intergenic
TAACCACAAGAAATGGTTTC+AGG 0.304021 7_3:+50240208 None:intergenic
CTTGAATGCCTCTCCTTTGC+CGG 0.304993 7_3:-50249345 Msa1107900:CDS
GTTCATCATATCATGTAATT+AGG 0.305570 7_3:-50240274 Msa1107900:three_prime_UTR
TTGGACCTGTCTAAAGAAAC+TGG 0.317774 7_3:+50244196 None:intergenic
CCGCCATCAGATCATATATT+AGG 0.327193 7_3:+50243307 None:intergenic
ACATTGTGCGCATTAGATAA+TGG 0.340793 7_3:+50246565 None:intergenic
ATATATGATGCTAATAACTA+TGG 0.345799 7_3:-50243604 Msa1107900:CDS
TTCTGCATTTACCTCCTTAG+TGG 0.350382 7_3:-50239985 Msa1107900:three_prime_UTR
TACTCAGGTTTATAGATTCC+TGG 0.355706 7_3:+50246407 None:intergenic
CACCACTTCACATTACTTGA+TGG 0.363178 7_3:-50243381 Msa1107900:CDS
TCATCATCGTCATCATTATC+TGG 0.364129 7_3:+50246269 None:intergenic
TCTTTCTTTAGATCTGATAC+TGG 0.364157 7_3:+50247274 None:intergenic
TGCTTTCAGATACTCAAATT+GGG 0.364970 7_3:-50245182 Msa1107900:CDS
CTTGTAAGTATTGAAGTCAT+TGG 0.367108 7_3:+50240631 None:intergenic
ACTTGCACGGGCCTGTCATC+TGG 0.368081 7_3:+50248314 None:intergenic
TCTTATCCTGTCGGCATACA+TGG 0.371242 7_3:+50240446 None:intergenic
CGTTGGCTTGCAGCTTGGTC+TGG 0.378002 7_3:-50247329 Msa1107900:intron
CCATTGAGATCAACAAGTTC+GGG 0.379557 7_3:+50246302 None:intergenic
TCACCCAATGGAACCTTAGA+AGG 0.388575 7_3:+50247647 None:intergenic
TGGAAATTGCATGTGTCCTC+TGG 0.394540 7_3:+50244228 None:intergenic
GTGTGTAATGACAATTTCTA+TGG 0.394814 7_3:-50249369 Msa1107900:exon
AATGCATCTTGCTGATCATT+AGG 0.395304 7_3:+50245215 None:intergenic
AGAGAGAAACAGTGACAGTT+AGG 0.396261 7_3:+50250151 None:intergenic
ATGATCAGCAAGATGCATTT+CGG 0.401431 7_3:-50245211 Msa1107900:CDS
ACCATTGAGATCAACAAGTT+CGG 0.403010 7_3:+50246301 None:intergenic
TCTCGTTTATTTCAGTCAAC+AGG 0.403952 7_3:+50240481 None:intergenic
TCAGATTAATATTCACATAC+AGG 0.404520 7_3:+50240051 None:intergenic
CTCCTTAGTGGAAGCTATGT+TGG 0.406529 7_3:-50239973 Msa1107900:three_prime_UTR
AGAGGACACATGCAATTTCC+AGG 0.406784 7_3:-50244226 Msa1107900:CDS
ATCTAGATAACCACAAGAAA+TGG 0.409012 7_3:+50240201 None:intergenic
TGGTTGGATTGCCCTTCGTC+TGG 0.413355 7_3:-50247692 Msa1107900:CDS
CTGAGCCGCGGCCCTTGCAT+TGG 0.430652 7_3:+50247114 None:intergenic
CTCTTCCACTCCGGAGTAGC+AGG 0.432247 7_3:+50246329 None:intergenic
GGTTATCTAGATGAATAGTT+AGG 0.433126 7_3:-50240190 Msa1107900:three_prime_UTR
CTGCTACTCCGGAGTGGAAG+AGG 0.435765 7_3:-50246328 Msa1107900:CDS
GTGGTTACAAATTGTTGAAA+GGG 0.436588 7_3:-50240120 Msa1107900:three_prime_UTR
GAAAGATCATCGAGTGTGCT+TGG 0.437704 7_3:-50240709 Msa1107900:CDS
TTGTAAGTATTGAAGTCATT+GGG 0.442744 7_3:+50240632 None:intergenic
TTCAAATGAGGTTTCCATGC+AGG 0.443363 7_3:-50243539 Msa1107900:CDS
AGAGGGTATCAAGCATGTTA+AGG 0.443861 7_3:-50247254 Msa1107900:intron
TCATTATTGTGTCAATCTCA+TGG 0.446224 7_3:+50245267 None:intergenic
GGGTTTATTGTTGCATTTGA+AGG 0.449536 7_3:-50241421 Msa1107900:intron
GGATTGCCCTTCGTCTGGCC+AGG 0.452831 7_3:-50247687 Msa1107900:CDS
GTATCATGCCGAAAATTTCC+TGG 0.453234 7_3:+50247669 None:intergenic
CACACCCAGTTTCTTTAGAC+AGG 0.457416 7_3:-50244201 Msa1107900:intron
AATGTCAATGTCTGTTACTC+AGG 0.460206 7_3:-50246547 Msa1107900:intron
CCAGAAGAGCACATAGAAAG+TGG 0.461582 7_3:-50249242 Msa1107900:CDS
GATACCTTCTAAGGTTCCAT+TGG 0.465384 7_3:-50247651 Msa1107900:CDS
GATAGTCTGTCCTGCTACTC+CGG 0.471499 7_3:-50246339 Msa1107900:CDS
TCTTCGACCTGGCCCTCAAA+AGG 0.473582 7_3:+50249308 None:intergenic
TCCTTAGTGGAAGCTATGTT+GGG 0.474664 7_3:-50239972 Msa1107900:three_prime_UTR
TCCATGTCATATATATAGTA+AGG 0.476655 7_3:+50242351 None:intergenic
TTTGAAGTTTGCGTGGTTTG+AGG 0.476850 7_3:-50249911 Msa1107900:intron
GGCCTGAATTTGAGCGGTAT+CGG 0.482718 7_3:+50240229 None:intergenic
AGTGGTTACAAATTGTTGAA+AGG 0.483792 7_3:-50240121 Msa1107900:three_prime_UTR
ATGCAGAATAACTTATACAT+TGG 0.484660 7_3:+50240000 None:intergenic
TGATTGACAGATGAATTATC+AGG 0.486142 7_3:+50247089 None:intergenic
ACCACTTCACATTACTTGAT+GGG 0.490316 7_3:-50243380 Msa1107900:CDS
CTTAACAAAGAAAATTATAA+GGG 0.490875 7_3:+50240145 None:intergenic
CTCATGAAGGTCTCTTAAAG+TGG 0.491856 7_3:-50241662 Msa1107900:CDS
CCCGAACTTGTTGATCTCAA+TGG 0.492780 7_3:-50246302 Msa1107900:CDS
ATACCTTCTAAGGTTCCATT+GGG 0.493016 7_3:-50247650 Msa1107900:CDS
TTATTTACATGCAGGTTGGT+TGG 0.495751 7_3:-50247708 Msa1107900:intron
CAACTGCGTGTCTGTGATAG+AGG 0.497145 7_3:-50243283 Msa1107900:intron
AGTATCAGATCTAAAGAAAG+AGG 0.498017 7_3:-50247272 Msa1107900:CDS
TCATGAGTACGAGGTACATA+AGG 0.503688 7_3:+50241678 None:intergenic
TGGTTATTTGAATTGTATTG+TGG 0.504212 7_3:-50249412 Msa1107900:five_prime_UTR
TGATGGAAGTAAGCTTCCTC+CGG 0.506250 7_3:-50248237 Msa1107900:CDS
AAAGCTAGTACAATTCTAGT+AGG 0.508928 7_3:-50250074 Msa1107900:intron
TCTGCGTCGTGTGAGAGCTT+CGG 0.511610 7_3:+50242168 None:intergenic
AAGATCCTTAAATCATATGA+TGG 0.512777 7_3:-50248254 Msa1107900:CDS
ATGTTGAAAGCTAGATCAAA+GGG 0.513533 7_3:-50240333 Msa1107900:three_prime_UTR
TGGAGCTGATATAGCTCGCC+GGG 0.516184 7_3:-50249222 Msa1107900:intron
TGGTACCGTTCATGATTCCT+GGG 0.518111 7_3:+50242384 None:intergenic
TATGAAATTCATACTTGCAA+CGG 0.519874 7_3:+50246227 None:intergenic
TCAAATGAGGTTTCCATGCA+GGG 0.525334 7_3:-50243538 Msa1107900:CDS
AAAGAAACTGGGTGTGACCC+TGG 0.527134 7_3:+50244208 None:intergenic
AGATTCAAGTTTCATTACAT+TGG 0.527636 7_3:-50240085 Msa1107900:three_prime_UTR
ATCTTTCCAGAATAAAGCAT+GGG 0.532742 7_3:+50240725 None:intergenic
ACATCATTTGCAACCCTGCA+TGG 0.534363 7_3:+50243525 None:intergenic
AAAGGATCTTCATCTTCCTC+CGG 0.535591 7_3:+50249326 None:intergenic
GCCTTCCCATGTATGCCGAC+AGG 0.536050 7_3:-50240452 Msa1107900:CDS
TGTGGCGGGTGAATGTTACT+TGG 0.537448 7_3:-50249394 Msa1107900:five_prime_UTR
CAGAACGGTTCTCAGAGTGA+TGG 0.537616 7_3:+50250098 None:intergenic
GTCTGTAAAGCTTTCACTGG+TGG 0.538117 7_3:-50240367 Msa1107900:three_prime_UTR
ATATGACATGGAGCCTTTCA+GGG 0.538294 7_3:-50242340 Msa1107900:intron
TCGGGAGCCCTCTTCCACTC+CGG 0.539359 7_3:+50246320 None:intergenic
AAAGAGAGCGTCCAGATGAC+AGG 0.539782 7_3:-50248325 Msa1107900:CDS
AGGTGGCTGTGATACTTGCA+CGG 0.543666 7_3:+50248301 None:intergenic
ATCTTCCACCGCTCACAGAA+AGG 0.545618 7_3:+50242429 None:intergenic
GCTTTCAGATACTCAAATTG+GGG 0.546530 7_3:-50245181 Msa1107900:CDS
TATAATGAATCAATATACTC+AGG 0.549904 7_3:+50246392 None:intergenic
TCTTCATCTTCCTCCGGCAA+AGG 0.550629 7_3:+50249332 None:intergenic
TCAGAAATGCATACCCTGAA+AGG 0.550897 7_3:+50242327 None:intergenic
GCTATCGATTCTTATCCTGT+CGG 0.551715 7_3:+50240437 None:intergenic
TATGTTGAAAGCTAGATCAA+AGG 0.553304 7_3:-50240334 Msa1107900:three_prime_UTR
GGTGGCTGTGATACTTGCAC+GGG 0.553801 7_3:+50248302 None:intergenic
TTCAGTCAACAGGACATCCT+CGG 0.555159 7_3:+50240491 None:intergenic
ATACCTAATATATGATCTGA+TGG 0.556235 7_3:-50243310 Msa1107900:CDS
TCTGTAAAGCTTTCACTGGT+GGG 0.556468 7_3:-50240366 Msa1107900:three_prime_UTR
AGTAATCAGTGAGGAACTCA+TGG 0.557728 7_3:-50240389 Msa1107900:exon
TAGATCCAATGCAAGGGCCG+CGG 0.559315 7_3:-50247119 Msa1107900:CDS
TGCTACTCCGGAGTGGAAGA+GGG 0.559470 7_3:-50246327 Msa1107900:CDS
CATACTTGCAACGGAGGACC+TGG 0.559887 7_3:+50246236 None:intergenic
GCAAAGGACATCATGTAGCT+AGG 0.560997 7_3:-50240416 Msa1107900:CDS
ATCTTCCTCCGGCAAAGGAG+AGG 0.560999 7_3:+50249337 None:intergenic
AAAGATCATCGAGTGTGCTT+GGG 0.561891 7_3:-50240708 Msa1107900:CDS
TCCTGTCGGCATACATGGGA+AGG 0.564005 7_3:+50240451 None:intergenic
AATGATGACGATGATGATGA+TGG 0.565460 7_3:-50246263 Msa1107900:CDS
TATGCAACATGGAAAGCTGA+TGG 0.568109 7_3:-50243633 Msa1107900:CDS
AGCAGCGGCCTTTCTGTGAG+CGG 0.568282 7_3:-50242437 Msa1107900:intron
AAGCTCTCACACGACGCAGA+TGG 0.569710 7_3:-50242165 Msa1107900:CDS
CAGATTAATATTCACATACA+GGG 0.570170 7_3:+50240052 None:intergenic
AAAATTTCCTGGCCAGACGA+AGG 0.570217 7_3:+50247680 None:intergenic
GCGCATTATACTCTTCGACC+TGG 0.572801 7_3:+50249297 None:intergenic
AAATTTCCTGGCCAGACGAA+GGG 0.572890 7_3:+50247681 None:intergenic
ATGGTCTGTAAAGCTTTCAC+TGG 0.574520 7_3:-50240370 Msa1107900:three_prime_UTR
CCCCATCAAGTAATGTGAAG+TGG 0.580537 7_3:+50243379 None:intergenic
ACACATGGTCACAATCGTAC+AGG 0.581359 7_3:-50246600 Msa1107900:CDS
ATGATGCTAATAACTATGGA+TGG 0.584416 7_3:-50243600 Msa1107900:CDS
GTGCAAGTATCACAGCCACC+TGG 0.585488 7_3:-50248299 Msa1107900:CDS
TATGTACCTCGTACTCATGA+AGG 0.587394 7_3:-50241675 Msa1107900:CDS
TGTGGTTTAGATCCAATGCA+AGG 0.587594 7_3:-50247126 Msa1107900:intron
TCCCAACATAGCTTCCACTA+AGG 0.587599 7_3:+50239971 None:intergenic
GATGATGATGATGGAGTACC+AGG 0.588112 7_3:-50246254 Msa1107900:CDS
AGGCCTGAAACCATTTCTTG+TGG 0.589994 7_3:-50240211 Msa1107900:three_prime_UTR
TGACTTCAATACTTACAAGA+AGG 0.590135 7_3:-50240627 Msa1107900:intron
CTTATCCTGTCGGCATACAT+GGG 0.592745 7_3:+50240447 None:intergenic
TTATTTGAATTGTATTGTGG+CGG 0.593201 7_3:-50249409 Msa1107900:five_prime_UTR
AGATCAAAGGGATCTACTGA+TGG 0.594850 7_3:-50240321 Msa1107900:three_prime_UTR
GATGGAAGTAAGCTTCCTCC+GGG 0.598868 7_3:-50248236 Msa1107900:intron
TTATAGATACCGTCTTATGT+AGG 0.600620 7_3:-50249437 Msa1107900:five_prime_UTR
AGGTAAAATATCGTCAGTGA+AGG 0.602869 7_3:+50247622 None:intergenic
GTGGAGCTGATATAGCTCGC+CGG 0.603735 7_3:-50249223 Msa1107900:CDS
GAATGCCTCTCCTTTGCCGG+AGG 0.607982 7_3:-50249342 Msa1107900:CDS
TCAGTGAAGGATTCACCCAA+TGG 0.608491 7_3:+50247635 None:intergenic
TATTTGAATTGTATTGTGGC+GGG 0.609126 7_3:-50249408 Msa1107900:five_prime_UTR
CCACTTCACATTACTTGATG+GGG 0.609587 7_3:-50243379 Msa1107900:CDS
GGCGGGTGAATGTTACTTGG+TGG 0.610796 7_3:-50249391 Msa1107900:five_prime_UTR
TTTCTGAATGTGCAGGCCAG+AGG 0.611157 7_3:-50244244 Msa1107900:intron
TCTGAAATGATTAGGTGAGG+AGG 0.612439 7_3:-50242242 Msa1107900:intron
TACATGATATGATGAACCGT+TGG 0.616735 7_3:+50240280 None:intergenic
GATCTTTCCAGAATAAAGCA+TGG 0.617360 7_3:+50240724 None:intergenic
ATAACCACACCTACATAAGA+CGG 0.620047 7_3:+50249428 None:intergenic
GTGGTTTAGATCCAATGCAA+GGG 0.629105 7_3:-50247125 Msa1107900:intron
CAACATAGCTTCCACTAAGG+AGG 0.629598 7_3:+50239974 None:intergenic
ATACTTGTTCATTGTACACA+TGG 0.630429 7_3:-50246615 Msa1107900:CDS
GAAATTCATACTTGCAACGG+AGG 0.631537 7_3:+50246230 None:intergenic
TCCTTACTATATATATGACA+TGG 0.631783 7_3:-50242352 Msa1107900:CDS
AGGATAAGAATCGATAGCAA+AGG 0.635554 7_3:-50240432 Msa1107900:CDS
GTTTCAGGCCTGAATTTGAG+CGG 0.636214 7_3:+50240223 None:intergenic
TATAGTAAGGATGTTTGCGA+TGG 0.637258 7_3:+50242364 None:intergenic
AGAGGAATTTGAAGTTTGCG+TGG 0.637839 7_3:-50249918 Msa1107900:five_prime_UTR
GTATCAGATCTAAAGAAAGA+GGG 0.640851 7_3:-50247271 Msa1107900:CDS
TGTCAATCACTTTGTGTACG+AGG 0.643052 7_3:-50247075 Msa1107900:intron
TACAAATGAACATCATCCAA+CGG 0.644001 7_3:-50240296 Msa1107900:three_prime_UTR
TCTGTCCTGCTACTCCGGAG+TGG 0.644223 7_3:-50246334 Msa1107900:CDS
TGGACCTGTCTAAAGAAACT+GGG 0.648364 7_3:+50244197 None:intergenic
GAGGACACATGCAATTTCCA+GGG 0.649406 7_3:-50244225 Msa1107900:CDS
AGAAAGAAGTGATTGAACCC+AGG 0.649900 7_3:-50242401 Msa1107900:CDS
ATGTTGCATAGTAGTAACGC+TGG 0.651191 7_3:+50243646 None:intergenic
AACGTGAAGAAAGAAAGAAA+CGG 0.652918 7_3:-50248352 Msa1107900:CDS
GCGCAATATACTCTTCGACC+TGG 0.662702 7_3:+50249264 None:intergenic
AGCGTTACTACTATGCAACA+TGG 0.671428 7_3:-50243644 Msa1107900:CDS
CTTTCAGATACTCAAATTGG+GGG 0.674339 7_3:-50245180 Msa1107900:CDS
AATTATCAGGTACTGAGCCG+CGG 0.676080 7_3:+50247102 None:intergenic
TGTCGGCATACATGGGAAGG+CGG 0.676239 7_3:+50240454 None:intergenic
GATACCGTCTTATGTAGGTG+TGG 0.677078 7_3:-50249432 Msa1107900:five_prime_UTR
ATCATCGAGTGTGCTTGGGA+TGG 0.677706 7_3:-50240704 Msa1107900:CDS
TTGAACCCAGGAATCATGAA+CGG 0.698189 7_3:-50242389 Msa1107900:CDS
TCTTTCCAGAATAAAGCATG+GGG 0.710208 7_3:+50240726 None:intergenic
CCTAATATATGATCTGATGG+CGG 0.716701 7_3:-50243307 Msa1107900:CDS
AAGAGACCTTCATGAGTACG+AGG 0.716715 7_3:+50241669 None:intergenic
TCAGGTTTATAGATTCCTGG+AGG 0.718001 7_3:+50246410 None:intergenic
GGGATGGTGATAGAAACGAA+TGG 0.727257 7_3:-50240688 Msa1107900:CDS
CATAAAAGACAATATCACCG+AGG 0.749317 7_3:-50240508 Msa1107900:CDS
CTAGGCGAAAGTAATCAGTG+AGG 0.795658 7_3:-50240398 Msa1107900:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTCATTTTTTTTTTTTCA+AGG - chr7_3:50245664-50245683 Msa1107900:intron 10.0%
!! AAATCACAATTTAAAAAAAA+GGG + chr7_3:50245897-50245916 None:intergenic 10.0%
!! AAAATCACAATTTAAAAAAA+AGG + chr7_3:50245898-50245917 None:intergenic 10.0%
!!! AATAATGAAAACAATTATTT+TGG + chr7_3:50246239-50246258 None:intergenic 10.0%
!! AAATTGAAAATAAGAAAAAA+AGG + chr7_3:50247093-50247112 None:intergenic 10.0%
!!! TTAATTTAGTTTATTTTCTA+TGG - chr7_3:50247202-50247221 Msa1107900:intron 10.0%
!!! TTTGTTATAAATATACAAAT+AGG - chr7_3:50248991-50249010 Msa1107900:intron 10.0%
!!! TATATGAAGTATTTTTCATA+AGG - chr7_3:50240558-50240577 Msa1107900:intron 15.0%
!! TAAATAGTTAAGGATATAAT+AGG - chr7_3:50241586-50241605 Msa1107900:intron 15.0%
!! AAGTAACATTAATATTTCAT+TGG - chr7_3:50241611-50241630 Msa1107900:intron 15.0%
!!! AGTTATTCTAAAATTTGTTT+TGG - chr7_3:50242228-50242247 Msa1107900:CDS 15.0%
!!! GTTATTCTAAAATTTGTTTT+GGG - chr7_3:50242229-50242248 Msa1107900:CDS 15.0%
!! TAAATATATCAAATGTCTTA+AGG + chr7_3:50242404-50242423 None:intergenic 15.0%
!!! TTTTCATATAAGTTTTAGTA+CGG - chr7_3:50242704-50242723 Msa1107900:intron 15.0%
!! CTATATACTTAAAAAACATA+TGG + chr7_3:50243019-50243038 None:intergenic 15.0%
!! TCTATCTAATTAATATTAGT+TGG - chr7_3:50243403-50243422 Msa1107900:intron 15.0%
!! AATCACAATTTAAAAAAAAG+GGG + chr7_3:50245896-50245915 None:intergenic 15.0%
!! GATATATTATATTAACAAAG+TGG - chr7_3:50246078-50246097 Msa1107900:intron 15.0%
!! TTTCCTTATTAACAAATTTA+TGG - chr7_3:50247741-50247760 Msa1107900:intron 15.0%
!!! TAACCATAAATTTGTTAATA+AGG + chr7_3:50247747-50247766 None:intergenic 15.0%
!! CTTAACAAAGAAAATTATAA+GGG + chr7_3:50250079-50250098 None:intergenic 15.0%
!! ACTTAACAAAGAAAATTATA+AGG + chr7_3:50250080-50250099 None:intergenic 15.0%
!!! TATCTAGTTTTTTTTTTGAA+TGG - chr7_3:50250279-50250298 Msa1107900:five_prime_UTR 15.0%
!!! GTTTATTTTTGTTTTTACTC+AGG - chr7_3:50240245-50240264 Msa1107900:three_prime_UTR 20.0%
!!! AATTAGTTAATTCTAGTTGT+TGG - chr7_3:50240434-50240453 Msa1107900:CDS 20.0%
!!! ATTAGTTAATTCTAGTTGTT+GGG - chr7_3:50240435-50240454 Msa1107900:CDS 20.0%
!!! AAGGATTTAGTAATTTTTCT+AGG - chr7_3:50240577-50240596 Msa1107900:intron 20.0%
!!! ATTTTTCTAGGAGAATTTTT+TGG - chr7_3:50240589-50240608 Msa1107900:intron 20.0%
!!! TTGAATTAATTTTCCTTACA+GGG + chr7_3:50240642-50240661 None:intergenic 20.0%
!!! TTTGAATTAATTTTCCTTAC+AGG + chr7_3:50240643-50240662 None:intergenic 20.0%
!!! ATAGGATTGATAATATGAAT+TGG - chr7_3:50240747-50240766 Msa1107900:intron 20.0%
!! CAAAAAATATCATGAAATAG+CGG + chr7_3:50241303-50241322 None:intergenic 20.0%
!! GAGAGAATAATAAATAGTTA+AGG - chr7_3:50241576-50241595 Msa1107900:intron 20.0%
!!! TTCTAAAATGACATACAATT+TGG - chr7_3:50241671-50241690 Msa1107900:CDS 20.0%
!!! TCTAAAATGACATACAATTT+GGG - chr7_3:50241672-50241691 Msa1107900:CDS 20.0%
!!! TTATTTTCATAAGGTTTAGT+TGG - chr7_3:50241708-50241727 Msa1107900:intron 20.0%
!!! TATTTTCATAAGGTTTAGTT+GGG - chr7_3:50241709-50241728 Msa1107900:intron 20.0%
!! ATGATTTAAGGATCTTATTA+TGG + chr7_3:50241963-50241982 None:intergenic 20.0%
!! TATACAATTCCATTTATCTT+TGG - chr7_3:50242143-50242162 Msa1107900:intron 20.0%
!! ATACAATTCCATTTATCTTT+GGG - chr7_3:50242144-50242163 Msa1107900:intron 20.0%
!! ATAAATATCCCAAAGATAAA+TGG + chr7_3:50242155-50242174 None:intergenic 20.0%
!!! GATTTTCTATTTATAAATGC+TGG - chr7_3:50242355-50242374 Msa1107900:CDS 20.0%
!! TCATTATATTATTTACATGC+AGG - chr7_3:50242505-50242524 Msa1107900:intron 20.0%
!! ATGAAACAATGAAAGAAAAA+AGG - chr7_3:50242758-50242777 Msa1107900:intron 20.0%
!! TGAAACAATGAAAGAAAAAA+GGG - chr7_3:50242759-50242778 Msa1107900:intron 20.0%
!! AACGTAACAAATTGTAAAAA+AGG + chr7_3:50242876-50242895 None:intergenic 20.0%
!!! TTTTTTACAATTTGTTACGT+TGG - chr7_3:50242875-50242894 Msa1107900:intron 20.0%
!! TACTTAAAAAACATATGGTT+GGG + chr7_3:50243014-50243033 None:intergenic 20.0%
!! ATACTTAAAAAACATATGGT+TGG + chr7_3:50243015-50243034 None:intergenic 20.0%
!! ATAGTATACCTTTATATAAG+TGG - chr7_3:50243035-50243054 Msa1107900:intron 20.0%
!! TAGTATACCTTTATATAAGT+GGG - chr7_3:50243036-50243055 Msa1107900:intron 20.0%
!!! TTGAGTTATTTTGAAGAATA+TGG - chr7_3:50243202-50243221 Msa1107900:intron 20.0%
!! ATGAAATCAATGCATTAAAT+AGG + chr7_3:50243332-50243351 None:intergenic 20.0%
!! TGGAATTGAAAATAATCATA+CGG + chr7_3:50243543-50243562 None:intergenic 20.0%
!! TATAATGAATCAATATACTC+AGG + chr7_3:50243832-50243851 None:intergenic 20.0%
!! AAATAAATAAATCTTCCAGT+TGG + chr7_3:50244156-50244175 None:intergenic 20.0%
!!! AACATTCTAAAAACTTTCTT+TGG - chr7_3:50244203-50244222 Msa1107900:CDS 20.0%
!!! ACATTCTAAAAACTTTCTTT+GGG - chr7_3:50244204-50244223 Msa1107900:CDS 20.0%
!!! AATTTTCCTTTGGAATAATA+TGG - chr7_3:50244311-50244330 Msa1107900:intron 20.0%
!!! GTATTGATTTTTCTAGATTT+TGG - chr7_3:50244384-50244403 Msa1107900:intron 20.0%
!!! CTAGATTTTGGAAAAAATAA+CGG - chr7_3:50244396-50244415 Msa1107900:intron 20.0%
!!! TAGATTTTGGAAAAAATAAC+GGG - chr7_3:50244397-50244416 Msa1107900:intron 20.0%
!! ATAAAGATTTAATTACCATC+AGG + chr7_3:50244910-50244929 None:intergenic 20.0%
!!! TGCAAATAGAAAAGTTTTTA+AGG - chr7_3:50245245-50245264 Msa1107900:CDS 20.0%
!!! TAATTTTTGCTATGCAATTT+AGG + chr7_3:50245388-50245407 None:intergenic 20.0%
!! TGCATAGCAAAAATTAAATT+TGG - chr7_3:50245392-50245411 Msa1107900:intron 20.0%
!! ATAGCAAAAATTAAATTTGG+TGG - chr7_3:50245395-50245414 Msa1107900:intron 20.0%
!! TAGCAAAAATTAAATTTGGT+GGG - chr7_3:50245396-50245415 Msa1107900:intron 20.0%
!!! TTTTTTTTTTTCAAGGTGTT+TGG - chr7_3:50245671-50245690 Msa1107900:intron 20.0%
!! ATCACAATTTAAAAAAAAGG+GGG + chr7_3:50245895-50245914 None:intergenic 20.0%
!! AGATACATTAATAAGGTAAA+GGG + chr7_3:50245940-50245959 None:intergenic 20.0%
!! ATCAATATATAGCATGTTAA+TGG + chr7_3:50246061-50246080 None:intergenic 20.0%
!! TTAACATACTATGGATAAAA+AGG + chr7_3:50246513-50246532 None:intergenic 20.0%
!! CAACAAAATTTAACATACTA+TGG + chr7_3:50246522-50246541 None:intergenic 20.0%
!! ATATATGATGCTAATAACTA+TGG - chr7_3:50246617-50246636 Msa1107900:CDS 20.0%
!!! ATAGAAACTTCAATTTTAGA+AGG - chr7_3:50246658-50246677 Msa1107900:CDS 20.0%
!! CTAATACTGTTAATTTAAAG+TGG - chr7_3:50246734-50246753 Msa1107900:intron 20.0%
!!! ATTTAAAGTGGAATTTAAAG+TGG - chr7_3:50246746-50246765 Msa1107900:intron 20.0%
!! ACATTATGATATACAAAAGT+AGG - chr7_3:50247392-50247411 Msa1107900:intron 20.0%
!! CATTATGATATACAAAAGTA+GGG - chr7_3:50247393-50247412 Msa1107900:intron 20.0%
!! TAACAAATTTATGGTTAATC+TGG - chr7_3:50247750-50247769 Msa1107900:intron 20.0%
!!! GATATATATCTGAAATGATT+AGG - chr7_3:50247971-50247990 Msa1107900:intron 20.0%
!! ACAAAATAAATTGAATGAGT+TGG + chr7_3:50248858-50248877 None:intergenic 20.0%
!! AAATATACAAATAGGACAAT+TGG - chr7_3:50248999-50249018 Msa1107900:intron 20.0%
!!! TCATGTTTTTTTAGTTCATT+CGG - chr7_3:50249424-50249443 Msa1107900:five_prime_UTR 20.0%
!! AAAAGGAAATTCAAAATCAA+AGG + chr7_3:50249633-50249652 None:intergenic 20.0%
!!! TAATTTTCTTTGTTAAGTAG+TGG - chr7_3:50250082-50250101 Msa1107900:five_prime_UTR 20.0%
! GTTTGAAGAAAAAGTGATTA+TGG + chr7_3:50239964-50239983 None:intergenic 25.0%
!!! AGGTTTTGTTAATTTGTTTC+AGG - chr7_3:50240265-50240284 Msa1107900:three_prime_UTR 25.0%
!!! TTTTGATGTTTGTTGAAGTT+AGG - chr7_3:50240371-50240390 Msa1107900:three_prime_UTR 25.0%
!! AGAGAAATATGTGATTTTGT+TGG - chr7_3:50240478-50240497 Msa1107900:CDS 25.0%
!! GAGAAATATGTGATTTTGTT+GGG - chr7_3:50240479-50240498 Msa1107900:CDS 25.0%
! TGGTTATTTGAATTGTATTG+TGG - chr7_3:50240809-50240828 Msa1107900:intron 25.0%
! TTATTTGAATTGTATTGTGG+CGG - chr7_3:50240812-50240831 Msa1107900:intron 25.0%
! AAGTAAGAATAGAGAAGAAA+GGG + chr7_3:50241027-50241046 None:intergenic 25.0%
! AAAGTAAGAATAGAGAAGAA+AGG + chr7_3:50241028-50241047 None:intergenic 25.0%
! CAATCAATGTTGTTAAATAG+CGG + chr7_3:50241389-50241408 None:intergenic 25.0%
!! TTTAACAACATTGATTGGTA+TGG - chr7_3:50241392-50241411 Msa1107900:intron 25.0%
! ATTGTCCGTAATAAATGATA+TGG - chr7_3:50241526-50241545 Msa1107900:intron 25.0%
! TTGTCCGTAATAAATGATAT+GGG - chr7_3:50241527-50241546 Msa1107900:intron 25.0%
! TTGTAAAGCGACATATAATT+TGG - chr7_3:50241636-50241655 Msa1107900:CDS 25.0%
! TGTAAAGCGACATATAATTT+GGG - chr7_3:50241637-50241656 Msa1107900:CDS 25.0%
!!! GAATCCAATTTCATTTTGAT+GGG - chr7_3:50241731-50241750 Msa1107900:intron 25.0%
! ATAACCCATCAAAATGAAAT+TGG + chr7_3:50241738-50241757 None:intergenic 25.0%
!!! ATTTTGATGGGTTATTTTTG+TGG - chr7_3:50241743-50241762 Msa1107900:intron 25.0%
!! TGAACGAAAATGTATAGTTT+TGG + chr7_3:50241814-50241833 None:intergenic 25.0%
! AAAAAATTATCATATCCAGG+TGG + chr7_3:50241940-50241959 None:intergenic 25.0%
! TGGAAAAAATTATCATATCC+AGG + chr7_3:50241943-50241962 None:intergenic 25.0%
! AAGATCCTTAAATCATATGA+TGG - chr7_3:50241967-50241986 Msa1107900:intron 25.0%
! TACTTCCATCATATGATTTA+AGG + chr7_3:50241975-50241994 None:intergenic 25.0%
! ATAACCAGTCTTTATTGAAA+TGG - chr7_3:50242103-50242122 Msa1107900:intron 25.0%
! TTTACCATTTCAATAAAGAC+TGG + chr7_3:50242110-50242129 None:intergenic 25.0%
! TCTTTATTGAAATGGTAAAC+TGG - chr7_3:50242111-50242130 Msa1107900:intron 25.0%
!!! TTGTTTTGGGTGAATAAAAT+TGG - chr7_3:50242242-50242261 Msa1107900:intron 25.0%
! TTTCTATTTATAAATGCTGG+TGG - chr7_3:50242358-50242377 Msa1107900:CDS 25.0%
! TATATTATTTACATGCAGGT+TGG - chr7_3:50242509-50242528 Msa1107900:intron 25.0%
! ACTTAAAAAACATATGGTTG+GGG + chr7_3:50243013-50243032 None:intergenic 25.0%
! CAAATGTAAGAACAAGAAAA+AGG + chr7_3:50243064-50243083 None:intergenic 25.0%
!! ATGGCATATATTTCTCTTTT+TGG - chr7_3:50243221-50243240 Msa1107900:intron 25.0%
!! TGGCATATATTTCTCTTTTT+GGG - chr7_3:50243222-50243241 Msa1107900:intron 25.0%
!! GTATGATTATTTTCAATTCC+AGG - chr7_3:50243542-50243561 Msa1107900:CDS 25.0%
! TATGAAATTCATACTTGCAA+CGG + chr7_3:50243997-50244016 None:intergenic 25.0%
! TGATATCTCGTATTATGAAT+AGG - chr7_3:50244048-50244067 Msa1107900:intron 25.0%
! TGTTAGAACTAATAGGAAAA+TGG + chr7_3:50244113-50244132 None:intergenic 25.0%
!!! AATACTTTGAAGTACTTGAT+TGG - chr7_3:50244452-50244471 Msa1107900:intron 25.0%
! TACAAAACCAATTAACAACT+AGG + chr7_3:50244613-50244632 None:intergenic 25.0%
!!! TGTTAATTGGTTTTGTACTT+AGG - chr7_3:50244616-50244635 Msa1107900:intron 25.0%
! TGAATATGAGTTCTCATATT+GGG - chr7_3:50244694-50244713 Msa1107900:intron 25.0%
!! TATGTCTTTCCTATTTTCTT+AGG - chr7_3:50244927-50244946 Msa1107900:intron 25.0%
! ATCAAAGGCAGATATTTAAA+AGG + chr7_3:50245077-50245096 None:intergenic 25.0%
! TAAAATAAGCTAATCCAAAC+GGG + chr7_3:50245204-50245223 None:intergenic 25.0%
! CTAAAATAAGCTAATCCAAA+CGG + chr7_3:50245205-50245224 None:intergenic 25.0%
!! ATGAAGATACAATTTTCGTT+AGG - chr7_3:50245289-50245308 Msa1107900:intron 25.0%
!! TGAAGATACAATTTTCGTTA+GGG - chr7_3:50245290-50245309 Msa1107900:intron 25.0%
!! AGCAAAAATTAAATTTGGTG+GGG - chr7_3:50245397-50245416 Msa1107900:intron 25.0%
!! ATTTATGTTTGCCTTATTGT+TGG - chr7_3:50245446-50245465 Msa1107900:intron 25.0%
!!! ATCTTATTGATTTCGCAATA+TGG + chr7_3:50245628-50245647 None:intergenic 25.0%
!! CAATAAGATTTTCTCTAAGT+TGG - chr7_3:50245639-50245658 Msa1107900:intron 25.0%
!! CTATCACCTAAACAAATTTT+TGG + chr7_3:50245697-50245716 None:intergenic 25.0%
! ACAAAATTCAACAATAGTCT+GGG + chr7_3:50245815-50245834 None:intergenic 25.0%
! ATACATTAATAAGGTAAAGG+GGG + chr7_3:50245938-50245957 None:intergenic 25.0%
! GATACATTAATAAGGTAAAG+GGG + chr7_3:50245939-50245958 None:intergenic 25.0%
! GAGATACATTAATAAGGTAA+AGG + chr7_3:50245941-50245960 None:intergenic 25.0%
! GCATTAGAGATACATTAATA+AGG + chr7_3:50245947-50245966 None:intergenic 25.0%
! TTATTAATTTCTGAATGTGC+AGG - chr7_3:50245970-50245989 Msa1107900:intron 25.0%
! TCTATTATCTCTTTGTTAGT+CGG + chr7_3:50246169-50246188 None:intergenic 25.0%
!! AATCACAACAGAAATCTTTT+TGG + chr7_3:50246368-50246387 None:intergenic 25.0%
! TTACTACATTTACTGAACTA+TGG + chr7_3:50246468-50246487 None:intergenic 25.0%
!!! ATTTTAGAAGGATTCAAATG+AGG - chr7_3:50246670-50246689 Msa1107900:intron 25.0%
!! CTGCTAATACACTTATATTT+TGG - chr7_3:50246791-50246810 Msa1107900:intron 25.0%
!!! ACTTATATTTTGGCTTTCAA+GGG - chr7_3:50246801-50246820 Msa1107900:intron 25.0%
! ATACCTAATATATGATCTGA+TGG - chr7_3:50246911-50246930 Msa1107900:intron 25.0%
! GCAAATAAAATTACACCTAA+GGG + chr7_3:50247041-50247060 None:intergenic 25.0%
! TGCAAATAAAATTACACCTA+AGG + chr7_3:50247042-50247061 None:intergenic 25.0%
!!! TATAGCTATTGTTTCTATAG+TGG - chr7_3:50247231-50247250 Msa1107900:intron 25.0%
! AGTATTTCACACATTAAAGT+GGG - chr7_3:50247483-50247502 Msa1107900:intron 25.0%
!! CCAAACATAAAATTGATTTC+AGG + chr7_3:50247650-50247669 None:intergenic 25.0%
!! CCTGAAATCAATTTTATGTT+TGG - chr7_3:50247647-50247666 Msa1107900:CDS 25.0%
!!! GGTTGATAAAATCAAATGTT+TGG - chr7_3:50247668-50247687 Msa1107900:CDS 25.0%
! TCCTTACTATATATATGACA+TGG - chr7_3:50247869-50247888 Msa1107900:intron 25.0%
! TCCATGTCATATATATAGTA+AGG + chr7_3:50247873-50247892 None:intergenic 25.0%
! TAACCAATATTTCAATCATG+TGG - chr7_3:50248196-50248215 Msa1107900:intron 25.0%
! GATATTAAGATTGCTATAGA+AGG + chr7_3:50248321-50248340 None:intergenic 25.0%
! AAGAAAAAGGAAATACTATG+TGG + chr7_3:50248457-50248476 None:intergenic 25.0%
! GAATATCTACAATGTATGTT+TGG - chr7_3:50248887-50248906 Msa1107900:intron 25.0%
!! AATGTATGTTTGGAATATCA+GGG - chr7_3:50248897-50248916 Msa1107900:intron 25.0%
! TGGTTGAAGTTATAGTATTT+AGG + chr7_3:50249116-50249135 None:intergenic 25.0%
! TTCTTGCTTCATTATAGAAT+AGG - chr7_3:50249172-50249191 Msa1107900:intron 25.0%
! AAATTCTATTATGTCTAGTC+AGG - chr7_3:50249195-50249214 Msa1107900:intron 25.0%
! GAACTAAAAAAACATGACAA+GGG + chr7_3:50249421-50249440 None:intergenic 25.0%
! TGAACTAAAAAAACATGACA+AGG + chr7_3:50249422-50249441 None:intergenic 25.0%
!!! TTGTAAGTATTGAAGTCATT+GGG + chr7_3:50249592-50249611 None:intergenic 25.0%
! AAATTCAAAATCAAAGGAGT+TGG + chr7_3:50249627-50249646 None:intergenic 25.0%
! ATACAAAATCAGAGAGAAAA+AGG + chr7_3:50249650-50249669 None:intergenic 25.0%
! GTTCATCATATCATGTAATT+AGG - chr7_3:50249947-50249966 Msa1107900:intron 25.0%
!! AGATTCAAGTTTCATTACAT+TGG - chr7_3:50250136-50250155 Msa1107900:five_prime_UTR 25.0%
! CAGATTAATATTCACATACA+GGG + chr7_3:50250172-50250191 None:intergenic 25.0%
! TCAGATTAATATTCACATAC+AGG + chr7_3:50250173-50250192 None:intergenic 25.0%
! ATGCAGAATAACTTATACAT+TGG + chr7_3:50250224-50250243 None:intergenic 25.0%
!!! ATTGTACTAGCTTTTCAGAA+CGG + chr7_3:50240141-50240160 None:intergenic 30.0%
AAAGCTAGTACAATTCTAGT+AGG - chr7_3:50240147-50240166 Msa1107900:three_prime_UTR 30.0%
TAGTACAATTCTAGTAGGTA+GGG - chr7_3:50240152-50240171 Msa1107900:three_prime_UTR 30.0%
!!! AGGTTTGAAGTTTTTTGAAG+AGG - chr7_3:50240285-50240304 Msa1107900:three_prime_UTR 30.0%
!!! AGGAGAATTTTTTGGTACAT+AGG - chr7_3:50240597-50240616 Msa1107900:intron 30.0%
!!! GGAGAATTTTTTGGTACATA+GGG - chr7_3:50240598-50240617 Msa1107900:intron 30.0%
ATAACACGGCATTAAATGAT+TGG - chr7_3:50240699-50240718 Msa1107900:CDS 30.0%
! TTGATAATATGAATTGGTGC+AGG - chr7_3:50240753-50240772 Msa1107900:intron 30.0%
TTATAGATACCGTCTTATGT+AGG - chr7_3:50240784-50240803 Msa1107900:intron 30.0%
TATTTGAATTGTATTGTGGC+GGG - chr7_3:50240813-50240832 Msa1107900:intron 30.0%
GTGTGTAATGACAATTTCTA+TGG - chr7_3:50240852-50240871 Msa1107900:intron 30.0%
CACACAGTATCAAACATAAA+AGG + chr7_3:50241058-50241077 None:intergenic 30.0%
! CTTTTATGTTTGATACTGTG+TGG - chr7_3:50241056-50241075 Msa1107900:intron 30.0%
TGGTTTATGATCGAACATTA+TGG - chr7_3:50241076-50241095 Msa1107900:intron 30.0%
TTGTTTGATACTGTCATGAT+TGG - chr7_3:50241157-50241176 Msa1107900:intron 30.0%
! TCATGATTGGTGATTTAAGT+TGG - chr7_3:50241170-50241189 Msa1107900:intron 30.0%
CGCTATTTAACAACATTGAT+TGG - chr7_3:50241387-50241406 Msa1107900:intron 30.0%
CTGTCCCATATCATTTATTA+CGG + chr7_3:50241534-50241553 None:intergenic 30.0%
AAATGACATACAATTTGGGA+CGG - chr7_3:50241676-50241695 Msa1107900:CDS 30.0%
!! AGGGAGTAGTTATTTTCATA+AGG - chr7_3:50241699-50241718 Msa1107900:intron 30.0%
! GGAATCCAATTTCATTTTGA+TGG - chr7_3:50241730-50241749 Msa1107900:intron 30.0%
AACGTGAAGAAAGAAAGAAA+CGG - chr7_3:50241869-50241888 Msa1107900:intron 30.0%
AATAAAGCAAATAGCATCTG+AGG + chr7_3:50242184-50242203 None:intergenic 30.0%
! CAAGCATTTTGTGTTCTTTT+GGG - chr7_3:50242286-50242305 Msa1107900:intron 30.0%
! AAGCATTTTGTGTTCTTTTG+GGG - chr7_3:50242287-50242306 Msa1107900:intron 30.0%
CTCTGCATTATGTATTTGAT+AGG + chr7_3:50242335-50242354 None:intergenic 30.0%
CTATCAAATACATAATGCAG+AGG - chr7_3:50242333-50242352 Msa1107900:intron 30.0%
! CTAAATGAGTATCTTTTACC+AGG + chr7_3:50242622-50242641 None:intergenic 30.0%
! ATACATCAACAGAGAGTTTT+AGG - chr7_3:50242649-50242668 Msa1107900:intron 30.0%
! TACATCAACAGAGAGTTTTA+GGG - chr7_3:50242650-50242669 Msa1107900:intron 30.0%
!! TCATATAAGTTTTAGTACGG+TGG - chr7_3:50242707-50242726 Msa1107900:intron 30.0%
TCTTTCTTTAGATCTGATAC+TGG + chr7_3:50242950-50242969 None:intergenic 30.0%
AGTATCAGATCTAAAGAAAG+AGG - chr7_3:50242949-50242968 Msa1107900:intron 30.0%
GTATCAGATCTAAAGAAAGA+GGG - chr7_3:50242950-50242969 Msa1107900:intron 30.0%
TGATTGACAGATGAATTATC+AGG + chr7_3:50243135-50243154 None:intergenic 30.0%
! GGCATATATTTCTCTTTTTG+GGG - chr7_3:50243223-50243242 Msa1107900:intron 30.0%
!!! TATATTTCTCTTTTTGGGGT+AGG - chr7_3:50243227-50243246 Msa1107900:intron 30.0%
ACGATAAAAATTGTCTAACC+TGG + chr7_3:50243563-50243582 None:intergenic 30.0%
ATACTTGTTCATTGTACACA+TGG - chr7_3:50243606-50243625 Msa1107900:CDS 30.0%
! ATTTTTATCGCCTGTAAAGA+AGG + chr7_3:50243775-50243794 None:intergenic 30.0%
!! TTCCTATTAGTTCTAACACA+TGG - chr7_3:50244115-50244134 Msa1107900:intron 30.0%
AACCATGTGTTAGAACTAAT+AGG + chr7_3:50244120-50244139 None:intergenic 30.0%
!! ATTAGTTCTAACACATGGTT+TGG - chr7_3:50244120-50244139 Msa1107900:intron 30.0%
!! TTAGTTCTAACACATGGTTT+GGG - chr7_3:50244121-50244140 Msa1107900:intron 30.0%
!! TCTAATTGTTTCTACCTTGT+AGG - chr7_3:50244283-50244302 Msa1107900:intron 30.0%
!! CTAATTGTTTCTACCTTGTA+GGG - chr7_3:50244284-50244303 Msa1107900:intron 30.0%
! TGATTGGATTAGAGTAAAAG+TGG - chr7_3:50244468-50244487 Msa1107900:intron 30.0%
! GATTGGATTAGAGTAAAAGT+GGG - chr7_3:50244469-50244488 Msa1107900:intron 30.0%
TACCTCTATAGATATGCTAT+GGG - chr7_3:50244496-50244515 Msa1107900:intron 30.0%
!!! TTTTGCTCATGACTTTTTCA+AGG - chr7_3:50244556-50244575 Msa1107900:intron 30.0%
!!! TTTGCTCATGACTTTTTCAA+GGG - chr7_3:50244557-50244576 Msa1107900:intron 30.0%
TCTTGAACCTAGTTGTTAAT+TGG - chr7_3:50244603-50244622 Msa1107900:intron 30.0%
CTGAATATGAGTTCTCATAT+TGG - chr7_3:50244693-50244712 Msa1107900:intron 30.0%
GACTCGTGTTCTATATATAT+GGG + chr7_3:50244731-50244750 None:intergenic 30.0%
TGACTCGTGTTCTATATATA+TGG + chr7_3:50244732-50244751 None:intergenic 30.0%
AACAGAATAGAGAAATAGTC+CGG - chr7_3:50244811-50244830 Msa1107900:intron 30.0%
!!! TAACTGTTTAGTTTTTCTCG+AGG + chr7_3:50244858-50244877 None:intergenic 30.0%
!! TATCGAATCATTTTTCCTGA+TGG - chr7_3:50244892-50244911 Msa1107900:intron 30.0%
TCATTATTGTGTCAATCTCA+TGG + chr7_3:50244957-50244976 None:intergenic 30.0%
! AATGACAAACGATGATGTTT+TGG - chr7_3:50244972-50244991 Msa1107900:intron 30.0%
! ATGACAAACGATGATGTTTT+GGG - chr7_3:50244973-50244992 Msa1107900:intron 30.0%
TGCTTTCAGATACTCAAATT+GGG - chr7_3:50245039-50245058 Msa1107900:intron 30.0%
ATACTAATCTCACACATCAA+AGG + chr7_3:50245092-50245111 None:intergenic 30.0%
TGATGTGTGAGATTAGTATT+TGG - chr7_3:50245093-50245112 Msa1107900:intron 30.0%
! CTTCACTACTTGTTTGTTAA+GGG - chr7_3:50245178-50245197 Msa1107900:CDS 30.0%
TTTCATAAGCTCAAACCAAA+CGG - chr7_3:50245360-50245379 Msa1107900:intron 30.0%
CACAATTGTAACCAACAATA+AGG + chr7_3:50245460-50245479 None:intergenic 30.0%
! TTGTTATTCCATGTTTGTAG+AGG - chr7_3:50245514-50245533 Msa1107900:intron 30.0%
CATTAAAACCTCTACAAACA+TGG + chr7_3:50245525-50245544 None:intergenic 30.0%
! GTTTGGCCAAAAATTTGTTT+AGG - chr7_3:50245688-50245707 Msa1107900:intron 30.0%
! TGTATACAATTTTGCTTCCT+AGG + chr7_3:50245768-50245787 None:intergenic 30.0%
CACAAAATTCAACAATAGTC+TGG + chr7_3:50245816-50245835 None:intergenic 30.0%
AACCTTAACTTCTGATAACA+TGG - chr7_3:50245854-50245873 Msa1107900:intron 30.0%
AACCATGTTATCAGAAGTTA+AGG + chr7_3:50245859-50245878 None:intergenic 30.0%
AAATGAACCATTCATTCTGA+AGG + chr7_3:50246303-50246322 None:intergenic 30.0%
ATGATGCTAATAACTATGGA+TGG - chr7_3:50246621-50246640 Msa1107900:CDS 30.0%
!!! CACTTATATTTTGGCTTTCA+AGG - chr7_3:50246800-50246819 Msa1107900:intron 30.0%
!!! AATACTTGCTGTTCTCATTT+TGG - chr7_3:50246988-50247007 Msa1107900:intron 30.0%
AAAGAAGAAACTGCTATGTA+AGG + chr7_3:50247182-50247201 None:intergenic 30.0%
CAAACAGAAAGCAAAGTAAA+TGG + chr7_3:50247306-50247325 None:intergenic 30.0%
CAGTATTTCACACATTAAAG+TGG - chr7_3:50247482-50247501 Msa1107900:intron 30.0%
! ATTTTAAATAGACCATGCTG+TGG - chr7_3:50247588-50247607 Msa1107900:CDS 30.0%
!! TTTATTTTTCACCTGGTAGT+TGG - chr7_3:50247943-50247962 Msa1107900:intron 30.0%
TATATCAATAACCAACTACC+AGG + chr7_3:50247957-50247976 None:intergenic 30.0%
! ATATCTGAAATGATTAGGTG+AGG - chr7_3:50247976-50247995 Msa1107900:intron 30.0%
AAGCCACATGATTGAAATAT+TGG + chr7_3:50248202-50248221 None:intergenic 30.0%
! TTAAGATATTTTTCCCCCAT+TGG - chr7_3:50248229-50248248 Msa1107900:intron 30.0%
TATCCATTCTCATGCTAAAT+AGG + chr7_3:50248290-50248309 None:intergenic 30.0%
ATATACGATGTCTCTTTAAC+TGG + chr7_3:50248353-50248372 None:intergenic 30.0%
AAAGGAAATACTATGTGGTA+AGG + chr7_3:50248452-50248471 None:intergenic 30.0%
TACTAACAATGTTTACGATC+AGG - chr7_3:50248509-50248528 Msa1107900:intron 30.0%
ACTAACAATGTTTACGATCA+GGG - chr7_3:50248510-50248529 Msa1107900:intron 30.0%
!! TTCAGTTGATTTTCTCTTTG+AGG - chr7_3:50248599-50248618 Msa1107900:intron 30.0%
AGAAGTGACTAAATTGTAAG+TGG + chr7_3:50248670-50248689 None:intergenic 30.0%
ACAAACAGCTAGATATTAGT+TGG + chr7_3:50248711-50248730 None:intergenic 30.0%
GAAAAAAGAAACTCATGGAA+GGG - chr7_3:50248780-50248799 Msa1107900:intron 30.0%
! ATAAATTGAATGAGTTGGAC+AGG + chr7_3:50248853-50248872 None:intergenic 30.0%
! CAATGTATGTTTGGAATATC+AGG - chr7_3:50248896-50248915 Msa1107900:intron 30.0%
! ATCTGAGATTATTGTATCAG+TGG - chr7_3:50248923-50248942 Msa1107900:intron 30.0%
! TCTGAGATTATTGTATCAGT+GGG - chr7_3:50248924-50248943 Msa1107900:intron 30.0%
AAGTTATAGTATTTAGGCAG+GGG + chr7_3:50249110-50249129 None:intergenic 30.0%
GAAGTTATAGTATTTAGGCA+GGG + chr7_3:50249111-50249130 None:intergenic 30.0%
TGAAGTTATAGTATTTAGGC+AGG + chr7_3:50249112-50249131 None:intergenic 30.0%
ACTATAACTTCAACCAACAA+TGG - chr7_3:50249120-50249139 Msa1107900:intron 30.0%
CTATAACTTCAACCAACAAT+GGG - chr7_3:50249121-50249140 Msa1107900:intron 30.0%
! GAAAATCTAAAATCTGCAGA+AGG - chr7_3:50249466-50249485 Msa1107900:intron 30.0%
ATCTTTCCAGAATAAAGCAT+GGG + chr7_3:50249499-50249518 None:intergenic 30.0%
!! CTTGTAAGTATTGAAGTCAT+TGG + chr7_3:50249593-50249612 None:intergenic 30.0%
TGACTTCAATACTTACAAGA+AGG - chr7_3:50249594-50249613 Msa1107900:intron 30.0%
!! AAAATCAAAGGAGTTGGTAA+AGG + chr7_3:50249621-50249640 None:intergenic 30.0%
TATGTTGAAAGCTAGATCAA+AGG - chr7_3:50249887-50249906 Msa1107900:intron 30.0%
ATGTTGAAAGCTAGATCAAA+GGG - chr7_3:50249888-50249907 Msa1107900:intron 30.0%
TACAAATGAACATCATCCAA+CGG - chr7_3:50249925-50249944 Msa1107900:five_prime_UTR 30.0%
ATCTAGATAACCACAAGAAA+TGG + chr7_3:50250023-50250042 None:intergenic 30.0%
GGTTATCTAGATGAATAGTT+AGG - chr7_3:50250031-50250050 Msa1107900:intron 30.0%
CTAGATGAATAGTTAGGTTT+AGG - chr7_3:50250037-50250056 Msa1107900:intron 30.0%
AGTGGTTACAAATTGTTGAA+AGG - chr7_3:50250100-50250119 Msa1107900:five_prime_UTR 30.0%
GTGGTTACAAATTGTTGAAA+GGG - chr7_3:50250101-50250120 Msa1107900:five_prime_UTR 30.0%
! GAGAGAGAAGTGTAACTATA+AGG + chr7_3:50240041-50240060 None:intergenic 35.0%
CTAGTACAATTCTAGTAGGT+AGG - chr7_3:50240151-50240170 Msa1107900:three_prime_UTR 35.0%
! TATGTGATTTTGTTGGGTGA+AGG - chr7_3:50240485-50240504 Msa1107900:CDS 35.0%
! ATGTGATTTTGTTGGGTGAA+GGG - chr7_3:50240486-50240505 Msa1107900:CDS 35.0%
!! TTTGGTACATAGGGTTTTGT+TGG - chr7_3:50240607-50240626 Msa1107900:intron 35.0%
!!! TTGGTACATAGGGTTTTGTT+GGG - chr7_3:50240608-50240627 Msa1107900:intron 35.0%
! TAATTTTCCTTACAGGGTAC+CGG + chr7_3:50240636-50240655 None:intergenic 35.0%
ATAACCACACCTACATAAGA+CGG + chr7_3:50240796-50240815 None:intergenic 35.0%
! GAAGATGAAGATCCTTTTGA+GGG - chr7_3:50240901-50240920 Msa1107900:intron 35.0%
AGAGTATAATGCGCCAAAAA+AGG - chr7_3:50240933-50240952 Msa1107900:intron 35.0%
!! GTGATTTAAGTTGGATACCT+TGG - chr7_3:50241179-50241198 Msa1107900:intron 35.0%
! GCTTTTAGTGTTGTCAATTG+TGG - chr7_3:50241231-50241250 Msa1107900:intron 35.0%
! GCTATAGTGCTATTGCATAA+CGG + chr7_3:50241367-50241386 None:intergenic 35.0%
! GTCATACAATTTGGGACAAA+GGG + chr7_3:50241429-50241448 None:intergenic 35.0%
! TCCCAAATTGTATGACGTTT+TGG - chr7_3:50241433-50241452 Msa1107900:CDS 35.0%
CCCAAAACGTCATACAATTT+GGG + chr7_3:50241437-50241456 None:intergenic 35.0%
! CCCAAATTGTATGACGTTTT+GGG - chr7_3:50241434-50241453 Msa1107900:CDS 35.0%
GATATGGGACAGATAAATGA+AGG - chr7_3:50241542-50241561 Msa1107900:intron 35.0%
!! TGACTGTATTTTGTTGTGCA+AGG - chr7_3:50241772-50241791 Msa1107900:intron 35.0%
!!! CTAAACTCCTGCTTTGTTTT+AGG - chr7_3:50241846-50241865 Msa1107900:intron 35.0%
ACACAAAATGCTTGCAACTT+TGG + chr7_3:50242280-50242299 None:intergenic 35.0%
! GCAAGCATTTTGTGTTCTTT+TGG - chr7_3:50242285-50242304 Msa1107900:intron 35.0%
!! TTATTTACATGCAGGTTGGT+TGG - chr7_3:50242513-50242532 Msa1107900:intron 35.0%
!! ATACCTTCTAAGGTTCCATT+GGG - chr7_3:50242571-50242590 Msa1107900:intron 35.0%
AGGTAAAATATCGTCAGTGA+AGG + chr7_3:50242602-50242621 None:intergenic 35.0%
! TTCACTGACGATATTTTACC+TGG - chr7_3:50242601-50242620 Msa1107900:intron 35.0%
!! AAGCATGTTAAGGTTTGTTG+TGG - chr7_3:50242977-50242996 Msa1107900:intron 35.0%
AAAGGAGCCCACTTATATAA+AGG + chr7_3:50243046-50243065 None:intergenic 35.0%
GTTCTTACATTTGAGCATCA+TGG - chr7_3:50243071-50243090 Msa1107900:intron 35.0%
ATATCACAAATCCCTATGAC+TGG + chr7_3:50243304-50243323 None:intergenic 35.0%
ACTATGAAGTCAAGATAGCA+GGG + chr7_3:50243368-50243387 None:intergenic 35.0%
ACATTGTGCGCATTAGATAA+TGG + chr7_3:50243659-50243678 None:intergenic 35.0%
AATGTCAATGTCTGTTACTC+AGG - chr7_3:50243674-50243693 Msa1107900:intron 35.0%
! TGTGTGTTTTCCTTCTTTAC+AGG - chr7_3:50243762-50243781 Msa1107900:intron 35.0%
TACTCAGGTTTATAGATTCC+TGG + chr7_3:50243817-50243836 None:intergenic 35.0%
ACCATTGAGATCAACAAGTT+CGG + chr7_3:50243923-50243942 None:intergenic 35.0%
TCATCATCGTCATCATTATC+TGG + chr7_3:50243955-50243974 None:intergenic 35.0%
! AATGATGACGATGATGATGA+TGG - chr7_3:50243958-50243977 Msa1107900:intron 35.0%
! TAACACATGGTTTGGGTTTA+GGG - chr7_3:50244128-50244147 Msa1107900:intron 35.0%
! CTAAAAACTTTCTTTGGGAG+AGG - chr7_3:50244209-50244228 Msa1107900:CDS 35.0%
CTGTATGATGTACGTAACAA+TGG + chr7_3:50244243-50244262 None:intergenic 35.0%
!! TCCTTTGGAATAATATGGTC+TGG - chr7_3:50244316-50244335 Msa1107900:intron 35.0%
TCCAGACCATATTATTCCAA+AGG + chr7_3:50244320-50244339 None:intergenic 35.0%
!! AATAACGGGCCAAAATTTGT+TGG - chr7_3:50244411-50244430 Msa1107900:intron 35.0%
CTACCTCTATAGATATGCTA+TGG - chr7_3:50244495-50244514 Msa1107900:intron 35.0%
TATAGATATGCTATGGGACA+TGG - chr7_3:50244502-50244521 Msa1107900:intron 35.0%
TTCTGTTAGTGTTAAGCTGT+CGG + chr7_3:50244798-50244817 None:intergenic 35.0%
TTACATAGTCTCTACTGTAC+CGG + chr7_3:50244833-50244852 None:intergenic 35.0%
CATGGTTCTCCTAAGAAAAT+AGG + chr7_3:50244939-50244958 None:intergenic 35.0%
AATGCATCTTGCTGATCATT+AGG + chr7_3:50245009-50245028 None:intergenic 35.0%
ATGATCAGCAAGATGCATTT+CGG - chr7_3:50245010-50245029 Msa1107900:intron 35.0%
CTGCTTTCAGATACTCAAAT+TGG - chr7_3:50245038-50245057 Msa1107900:intron 35.0%
GCTTTCAGATACTCAAATTG+GGG - chr7_3:50245040-50245059 Msa1107900:intron 35.0%
CTTTCAGATACTCAAATTGG+GGG - chr7_3:50245041-50245060 Msa1107900:intron 35.0%
! GATCTTTTTGTGATGACAAG+TGG - chr7_3:50245115-50245134 Msa1107900:intron 35.0%
! GCTTCACTACTTGTTTGTTA+AGG - chr7_3:50245177-50245196 Msa1107900:CDS 35.0%
TTCATAAGCTCAAACCAAAC+GGG - chr7_3:50245361-50245380 Msa1107900:intron 35.0%
AACCATGAATCGCAAAATTC+TGG + chr7_3:50245577-50245596 None:intergenic 35.0%
! ATGGTTGCTTTACCTTTACT+GGG - chr7_3:50245591-50245610 Msa1107900:intron 35.0%
ATTTCGCAATATGGTTACAG+AGG + chr7_3:50245619-50245638 None:intergenic 35.0%
TGTTAATGGCTCAGATAAGT+TGG + chr7_3:50246047-50246066 None:intergenic 35.0%
TACAAAGTAACTGCAGTCTT+AGG + chr7_3:50246108-50246127 None:intergenic 35.0%
AGCTAGGGATAATGTATTTC+TGG + chr7_3:50246263-50246282 None:intergenic 35.0%
!!! AATTTTGTTGCTTTGCAAGC+AGG - chr7_3:50246532-50246551 Msa1107900:intron 35.0%
!!! ATTTTGTTGCTTTGCAAGCA+GGG - chr7_3:50246533-50246552 Msa1107900:intron 35.0%
ACCACTTCACATTACTTGAT+GGG - chr7_3:50246841-50246860 Msa1107900:intron 35.0%
AGTGCCAAATTCAAAAAAGC+AGG - chr7_3:50246881-50246900 Msa1107900:intron 35.0%
!!! CTTGCCTGCTTTTTTGAATT+TGG + chr7_3:50246888-50246907 None:intergenic 35.0%
CAAATTCAAAAAAGCAGGCA+AGG - chr7_3:50246886-50246905 Msa1107900:intron 35.0%
CCTAATATATGATCTGATGG+CGG - chr7_3:50246914-50246933 Msa1107900:intron 35.0%
TTGTTCATAATCATGCCCTT+AGG - chr7_3:50247023-50247042 Msa1107900:intron 35.0%
GTATGCTGTCTAGAAAAACA+GGG + chr7_3:50247141-50247160 None:intergenic 35.0%
AAGGTCATAAAAGAAACAGC+TGG + chr7_3:50247163-50247182 None:intergenic 35.0%
GGATTTAGTCCTTTAGTTGA+GGG - chr7_3:50247414-50247433 Msa1107900:intron 35.0%
TGGTTAATCTGGTACAAACT+TGG - chr7_3:50247761-50247780 Msa1107900:intron 35.0%
TATAGTAAGGATGTTTGCGA+TGG + chr7_3:50247860-50247879 None:intergenic 35.0%
!!! CTTGAGCTTTATTTTTCACC+TGG - chr7_3:50247936-50247955 Msa1107900:intron 35.0%
CATCCTATTTAGCATGAGAA+TGG - chr7_3:50248284-50248303 Msa1107900:CDS 35.0%
GTAAGGAGGACATAAATGAA+TGG + chr7_3:50248435-50248454 None:intergenic 35.0%
GTAACATGAGGGAAAGAAAA+AGG + chr7_3:50248470-50248489 None:intergenic 35.0%
CATTCACTTCAGTAACATGA+GGG + chr7_3:50248481-50248500 None:intergenic 35.0%
TAGATATTAGTTGGATGCAC+CGG + chr7_3:50248702-50248721 None:intergenic 35.0%
!!! CTACTTTTTCTCTATGAACG+TGG - chr7_3:50248758-50248777 Msa1107900:intron 35.0%
ACGTGGAAAAAAGAAACTCA+TGG - chr7_3:50248775-50248794 Msa1107900:intron 35.0%
GGAAAAAAGAAACTCATGGA+AGG - chr7_3:50248779-50248798 Msa1107900:intron 35.0%
GGGTTTATTGTTGCATTTGA+AGG - chr7_3:50248800-50248819 Msa1107900:intron 35.0%
TATTGTTGCATTTGAAGGTC+AGG - chr7_3:50248805-50248824 Msa1107900:intron 35.0%
AATATTACTAGCCCAAGTAC+AGG + chr7_3:50248950-50248969 None:intergenic 35.0%
! AAAATGAAGCATCCCATTGT+TGG + chr7_3:50249136-50249155 None:intergenic 35.0%
! ATTTGTTTCTCAGTACCTAC+AGG - chr7_3:50249228-50249247 Msa1107900:CDS 35.0%
AAATAAGCATGTGAACCTGT+AGG + chr7_3:50249246-50249265 None:intergenic 35.0%
TACAGGTTCACATGCTTATT+TGG - chr7_3:50249245-50249264 Msa1107900:CDS 35.0%
AATTTCCATACCCAACTTTC+TGG + chr7_3:50249320-50249339 None:intergenic 35.0%
AGAAAGTTGGGTATGGAAAT+TGG - chr7_3:50249319-50249338 Msa1107900:CDS 35.0%
TCTTTCCAGAATAAAGCATG+GGG + chr7_3:50249498-50249517 None:intergenic 35.0%
GATCTTTCCAGAATAAAGCA+TGG + chr7_3:50249500-50249519 None:intergenic 35.0%
CTATTTGCTCAATATGTTGC+AGG - chr7_3:50249680-50249699 Msa1107900:intron 35.0%
CATAAAAGACAATATCACCG+AGG - chr7_3:50249713-50249732 Msa1107900:intron 35.0%
TCTCGTTTATTTCAGTCAAC+AGG + chr7_3:50249743-50249762 None:intergenic 35.0%
AGGATAAGAATCGATAGCAA+AGG - chr7_3:50249789-50249808 Msa1107900:intron 35.0%
TACATGATATGATGAACCGT+TGG + chr7_3:50249944-50249963 None:intergenic 35.0%
TAACCACAAGAAATGGTTTC+AGG + chr7_3:50250016-50250035 None:intergenic 35.0%
AGAGAGAAACAGTGACAGTT+AGG + chr7_3:50240073-50240092 None:intergenic 40.0%
TTTCTCTCTCTCTCTCTCTA+GGG - chr7_3:50240084-50240103 Msa1107900:three_prime_UTR 40.0%
! AGAGGAATTTGAAGTTTGCG+TGG - chr7_3:50240303-50240322 Msa1107900:three_prime_UTR 40.0%
! TTTGAAGTTTGCGTGGTTTG+AGG - chr7_3:50240310-50240329 Msa1107900:three_prime_UTR 40.0%
AGTTGTTGGGATGATTTACG+AGG - chr7_3:50240448-50240467 Msa1107900:CDS 40.0%
GTTGTTGGGATGATTTACGA+GGG - chr7_3:50240449-50240468 Msa1107900:CDS 40.0%
TGTTGGGTGAAGGGTAAATT+TGG - chr7_3:50240495-50240514 Msa1107900:CDS 40.0%
GTTGGGTGAAGGGTAAATTT+GGG - chr7_3:50240496-50240515 Msa1107900:CDS 40.0%
GTGCATGCTGGCATAATAAT+AGG - chr7_3:50240729-50240748 Msa1107900:CDS 40.0%
AAAGGATCTTCATCTTCCTC+CGG + chr7_3:50240898-50240917 None:intergenic 40.0%
! GGAAGATGAAGATCCTTTTG+AGG - chr7_3:50240900-50240919 Msa1107900:intron 40.0%
!! AATAGAGAAGAAAGGGTACC+CGG + chr7_3:50241020-50241039 None:intergenic 40.0%
AAATCCTTATCCCACTAAGC+CGG + chr7_3:50241126-50241145 None:intergenic 40.0%
ACTACAATCACAGTGTTCCA+AGG + chr7_3:50241199-50241218 None:intergenic 40.0%
GTGTTGTCAATTGTGGATTC+CGG - chr7_3:50241238-50241257 Msa1107900:intron 40.0%
! CGTCATACAATTTGGGACAA+AGG + chr7_3:50241430-50241449 None:intergenic 40.0%
GCCCAAAACGTCATACAATT+TGG + chr7_3:50241438-50241457 None:intergenic 40.0%
TCACGTTCCTAAAACAAAGC+AGG + chr7_3:50241856-50241875 None:intergenic 40.0%
GTATCATGCCGAAAATTTCC+TGG + chr7_3:50242555-50242574 None:intergenic 40.0%
TTTCGGCATGATACCTTCTA+AGG - chr7_3:50242561-50242580 Msa1107900:intron 40.0%
!! GATACCTTCTAAGGTTCCAT+TGG - chr7_3:50242570-50242589 Msa1107900:intron 40.0%
! CACAATCTATTTTGCACCCT+TGG - chr7_3:50242833-50242852 Msa1107900:intron 40.0%
AGTCAAATGAACCAAGCCAA+GGG + chr7_3:50242852-50242871 None:intergenic 40.0%
!! AGAGGGTATCAAGCATGTTA+AGG - chr7_3:50242967-50242986 Msa1107900:intron 40.0%
AAAACATATGGTTGGGGAGA+AGG + chr7_3:50243007-50243026 None:intergenic 40.0%
ACATTTGAGCATCATGGTTG+TGG - chr7_3:50243077-50243096 Msa1107900:intron 40.0%
TGTGGTTTAGATCCAATGCA+AGG - chr7_3:50243095-50243114 Msa1107900:intron 40.0%
GTGGTTTAGATCCAATGCAA+GGG - chr7_3:50243096-50243115 Msa1107900:intron 40.0%
TGTCAATCACTTTGTGTACG+AGG - chr7_3:50243146-50243165 Msa1107900:intron 40.0%
AATCACTTTGTGTACGAGGT+TGG - chr7_3:50243150-50243169 Msa1107900:intron 40.0%
AGAAACATGCTCCAGTCATA+GGG - chr7_3:50243290-50243309 Msa1107900:CDS 40.0%
CACTATGAAGTCAAGATAGC+AGG + chr7_3:50243369-50243388 None:intergenic 40.0%
CTGCTATCTTGACTTCATAG+TGG - chr7_3:50243367-50243386 Msa1107900:CDS 40.0%
! TGCGAATGCGATGTGATTTT+TGG - chr7_3:50243490-50243509 Msa1107900:intron 40.0%
TCAGGTTTATAGATTCCTGG+AGG + chr7_3:50243814-50243833 None:intergenic 40.0%
CCATTGAGATCAACAAGTTC+GGG + chr7_3:50243922-50243941 None:intergenic 40.0%
GAAATTCATACTTGCAACGG+AGG + chr7_3:50243994-50244013 None:intergenic 40.0%
! CTAACACATGGTTTGGGTTT+AGG - chr7_3:50244127-50244146 Msa1107900:intron 40.0%
! AACACATGGTTTGGGTTTAG+GGG - chr7_3:50244129-50244148 Msa1107900:intron 40.0%
! AAAACTTTCTTTGGGAGAGG+TGG - chr7_3:50244212-50244231 Msa1107900:CDS 40.0%
! AAACTTTCTTTGGGAGAGGT+GGG - chr7_3:50244213-50244232 Msa1107900:CDS 40.0%
CAGCTTGAGTTCAAAAACAG+TGG - chr7_3:50244260-50244279 Msa1107900:intron 40.0%
!! ATTGTTTCTACCTTGTAGGG+TGG - chr7_3:50244287-50244306 Msa1107900:intron 40.0%
TGGATGTATGTGCGTAACAA+TGG - chr7_3:50244336-50244355 Msa1107900:intron 40.0%
! AGCACACTGCCAACAAATTT+TGG + chr7_3:50244423-50244442 None:intergenic 40.0%
GTCCCATAGCATATCTATAG+AGG + chr7_3:50244501-50244520 None:intergenic 40.0%
CTAGGTTCAAGAATGTGCTA+AGG + chr7_3:50244595-50244614 None:intergenic 40.0%
CTGTCATAGGTAGATGTAGT+TGG + chr7_3:50244768-50244787 None:intergenic 40.0%
GGTACAGTAGAGACTATGTA+AGG - chr7_3:50244832-50244851 Msa1107900:intron 40.0%
TATGCAATTTAGGTCCCGTT+TGG + chr7_3:50245378-50245397 None:intergenic 40.0%
TACAATTGTGCGCTTAGACA+TGG - chr7_3:50245470-50245489 Msa1107900:intron 40.0%
! AGCCAGAATTTTGCGATTCA+TGG - chr7_3:50245572-50245591 Msa1107900:intron 40.0%
! CATGGTTGCTTTACCTTTAC+TGG - chr7_3:50245590-50245609 Msa1107900:intron 40.0%
CAAAAATCAGTGCTTCTCCT+AGG - chr7_3:50245748-50245767 Msa1107900:intron 40.0%
ATAAGGTAAAGGGGGAGAAT+CGG + chr7_3:50245930-50245949 None:intergenic 40.0%
TGGACCTGTCTAAAGAAACT+GGG + chr7_3:50246027-50246046 None:intergenic 40.0%
TTGGACCTGTCTAAAGAAAC+TGG + chr7_3:50246028-50246047 None:intergenic 40.0%
AGAAGATGGAATGCTAGCTA+GGG + chr7_3:50246278-50246297 None:intergenic 40.0%
! TCATTCTGAAGGAGAGAAGA+TGG + chr7_3:50246292-50246311 None:intergenic 40.0%
CTTCTCTCCTTCAGAATGAA+TGG - chr7_3:50246293-50246312 Msa1107900:CDS 40.0%
ATGTTGCATAGTAGTAACGC+TGG + chr7_3:50246578-50246597 None:intergenic 40.0%
AGCGTTACTACTATGCAACA+TGG - chr7_3:50246577-50246596 Msa1107900:CDS 40.0%
TATGCAACATGGAAAGCTGA+TGG - chr7_3:50246588-50246607 Msa1107900:CDS 40.0%
TTCAAATGAGGTTTCCATGC+AGG - chr7_3:50246682-50246701 Msa1107900:intron 40.0%
TCAAATGAGGTTTCCATGCA+GGG - chr7_3:50246683-50246702 Msa1107900:intron 40.0%
GGTTGCAAATGATGTATGTG+TGG - chr7_3:50246704-50246723 Msa1107900:intron 40.0%
AGTGGAAGCTTCTGAATATG+TGG - chr7_3:50246764-50246783 Msa1107900:intron 40.0%
!!! TATTTTGGCTTTCAAGGGCT+TGG - chr7_3:50246806-50246825 Msa1107900:intron 40.0%
CACCACTTCACATTACTTGA+TGG - chr7_3:50246840-50246859 Msa1107900:intron 40.0%
CCACTTCACATTACTTGATG+GGG - chr7_3:50246842-50246861 Msa1107900:intron 40.0%
CCGCCATCAGATCATATATT+AGG + chr7_3:50246917-50246936 None:intergenic 40.0%
GGTATGCTGTCTAGAAAAAC+AGG + chr7_3:50247142-50247161 None:intergenic 40.0%
! GCTAAGTTGACAGGAACTTT+GGG + chr7_3:50247348-50247367 None:intergenic 40.0%
! AGCTAAGTTGACAGGAACTT+TGG + chr7_3:50247349-50247368 None:intergenic 40.0%
! ACACAATCAGCTAAGTTGAC+AGG + chr7_3:50247357-50247376 None:intergenic 40.0%
AGCTGATTGTGTGAACTTGT+TGG - chr7_3:50247365-50247384 Msa1107900:intron 40.0%
GGGATTTAGTCCTTTAGTTG+AGG - chr7_3:50247413-50247432 Msa1107900:intron 40.0%
TTCACACATTAAAGTGGGAG+AGG - chr7_3:50247488-50247507 Msa1107900:intron 40.0%
TCACACATTAAAGTGGGAGA+GGG - chr7_3:50247489-50247508 Msa1107900:intron 40.0%
ATCTCTATCTTTCTCCACAC+TGG + chr7_3:50247519-50247538 None:intergenic 40.0%
AGAAAGAAGTGATTGAACCC+AGG - chr7_3:50247820-50247839 Msa1107900:intron 40.0%
TTGAACCCAGGAATCATGAA+CGG - chr7_3:50247832-50247851 Msa1107900:intron 40.0%
TATATGACATGGAGCCTTTC+AGG - chr7_3:50247880-50247899 Msa1107900:intron 40.0%
ATATGACATGGAGCCTTTCA+GGG - chr7_3:50247881-50247900 Msa1107900:intron 40.0%
TCAGAAATGCATACCCTGAA+AGG + chr7_3:50247897-50247916 None:intergenic 40.0%
CAAGCTGTATGCTCAATTTC+AGG + chr7_3:50247920-50247939 None:intergenic 40.0%
! TCTGAAATGATTAGGTGAGG+AGG - chr7_3:50247979-50247998 Msa1107900:intron 40.0%
! AGGTGAGGAGGAAAGATTTT+TGG - chr7_3:50247991-50248010 Msa1107900:intron 40.0%
AGATGGTCTCATATTTCAGG+TGG - chr7_3:50248073-50248092 Msa1107900:intron 40.0%
! GATGGTCTCATATTTCAGGT+GGG - chr7_3:50248074-50248093 Msa1107900:intron 40.0%
! ATATTGGTTACTAGCCAGCT+TGG + chr7_3:50248186-50248205 None:intergenic 40.0%
TGAGGTGATAGAGAACCAAT+GGG + chr7_3:50248247-50248266 None:intergenic 40.0%
TTGAGGTGATAGAGAACCAA+TGG + chr7_3:50248248-50248267 None:intergenic 40.0%
! ATTGGTTCTCTATCACCTCA+AGG - chr7_3:50248247-50248266 Msa1107900:CDS 40.0%
GTATATAGCCTAGCGTATAG+AGG - chr7_3:50248367-50248386 Msa1107900:intron 40.0%
ACATTGATCCTCTATACGCT+AGG + chr7_3:50248378-50248397 None:intergenic 40.0%
AGCTTAGAGTCTGGATACAT+TGG - chr7_3:50248408-50248427 Msa1107900:intron 40.0%
GGAAATACTATGTGGTAAGG+AGG + chr7_3:50248449-50248468 None:intergenic 40.0%
CCATTCACTTCAGTAACATG+AGG + chr7_3:50248482-50248501 None:intergenic 40.0%
CCTCATGTTACTGAAGTGAA+TGG - chr7_3:50248479-50248498 Msa1107900:intron 40.0%
CATGTTACTGAAGTGAATGG+AGG - chr7_3:50248482-50248501 Msa1107900:intron 40.0%
ACAATGTTTACGATCAGGGA+TGG - chr7_3:50248514-50248533 Msa1107900:intron 40.0%
CAATGTTTACGATCAGGGAT+GGG - chr7_3:50248515-50248534 Msa1107900:intron 40.0%
TCATGAGTACGAGGTACATA+AGG + chr7_3:50248546-50248565 None:intergenic 40.0%
TATGTACCTCGTACTCATGA+AGG - chr7_3:50248546-50248565 Msa1107900:intron 40.0%
CTCATGAAGGTCTCTTAAAG+TGG - chr7_3:50248559-50248578 Msa1107900:intron 40.0%
!! AGTCACTTCTAGTTTGTTGC+CGG - chr7_3:50248680-50248699 Msa1107900:intron 40.0%
TATTATGTCTAGTCAGGTCG+TGG - chr7_3:50249201-50249220 Msa1107900:intron 40.0%
TGCTTATTTGGTCTCGAGAT+TGG - chr7_3:50249257-50249276 Msa1107900:CDS 40.0%
AAAGATCATCGAGTGTGCTT+GGG - chr7_3:50249513-50249532 Msa1107900:intron 40.0%
!! GCTATCGATTCTTATCCTGT+CGG + chr7_3:50249787-50249806 None:intergenic 40.0%
AGTAATCAGTGAGGAACTCA+TGG - chr7_3:50249832-50249851 Msa1107900:intron 40.0%
ATGGTCTGTAAAGCTTTCAC+TGG - chr7_3:50249851-50249870 Msa1107900:intron 40.0%
TCTGTAAAGCTTTCACTGGT+GGG - chr7_3:50249855-50249874 Msa1107900:intron 40.0%
AGATCAAAGGGATCTACTGA+TGG - chr7_3:50249900-50249919 Msa1107900:intron 40.0%
TTCTGCATTTACCTCCTTAG+TGG - chr7_3:50250236-50250255 Msa1107900:five_prime_UTR 40.0%
TCCTTAGTGGAAGCTATGTT+GGG - chr7_3:50250249-50250268 Msa1107900:five_prime_UTR 40.0%
GTTTCTCTCTCTCTCTCTCT+AGG - chr7_3:50240083-50240102 Msa1107900:three_prime_UTR 45.0%
!!! TCTCTCTCTCTCTAGGGTTT+TGG - chr7_3:50240090-50240109 Msa1107900:three_prime_UTR 45.0%
! AAGTTTGCGTGGTTTGAGGT+AGG - chr7_3:50240314-50240333 Msa1107900:three_prime_UTR 45.0%
!!! CATAGGGTTTTGTTGGGTAC+CGG - chr7_3:50240614-50240633 Msa1107900:intron 45.0%
ATTGGATGATGAGTGCATGC+TGG - chr7_3:50240717-50240736 Msa1107900:CDS 45.0%
GATACCGTCTTATGTAGGTG+TGG - chr7_3:50240789-50240808 Msa1107900:intron 45.0%
TAATGCGCCAAAAAAGGACC+AGG - chr7_3:50240939-50240958 Msa1107900:intron 45.0%
!!! TCTTCGACCTGGTCCTTTTT+TGG + chr7_3:50240949-50240968 None:intergenic 45.0%
CCACTTTCTATGTGCTCTTC+TGG + chr7_3:50240982-50241001 None:intergenic 45.0%
! CCAGAAGAGCACATAGAAAG+TGG - chr7_3:50240979-50240998 Msa1107900:intron 45.0%
TTTGATTCATGTAGCCGACC+CGG - chr7_3:50241104-50241123 Msa1107900:intron 45.0%
AATCCTTATCCCACTAAGCC+GGG + chr7_3:50241125-50241144 None:intergenic 45.0%
TTGTGGATTCCGGAAAACAG+CGG - chr7_3:50241248-50241267 Msa1107900:intron 45.0%
!! TTGAACCAACCGCTGTTTTC+CGG + chr7_3:50241260-50241279 None:intergenic 45.0%
! TGACATACAATTTGGGACGG+AGG - chr7_3:50241679-50241698 Msa1107900:CDS 45.0%
! GACATACAATTTGGGACGGA+GGG - chr7_3:50241680-50241699 Msa1107900:CDS 45.0%
TGATGGAAGTAAGCTTCCTC+CGG - chr7_3:50241984-50242003 Msa1107900:intron 45.0%
ATCACCAATTACCACCAGCA+AGG + chr7_3:50242040-50242059 None:intergenic 45.0%
AAATTTCCTGGCCAGACGAA+GGG + chr7_3:50242543-50242562 None:intergenic 45.0%
AAAATTTCCTGGCCAGACGA+AGG + chr7_3:50242544-50242563 None:intergenic 45.0%
! TCGTCTGGCCAGGAAATTTT+CGG - chr7_3:50242544-50242563 Msa1107900:intron 45.0%
TCACCCAATGGAACCTTAGA+AGG + chr7_3:50242577-50242596 None:intergenic 45.0%
TCAGTGAAGGATTCACCCAA+TGG + chr7_3:50242589-50242608 None:intergenic 45.0%
GTACGGTGGTGATCAATGAA+AGG - chr7_3:50242721-50242740 Msa1107900:intron 45.0%
! TCTATTTTGCACCCTTGGCT+TGG - chr7_3:50242838-50242857 Msa1107900:intron 45.0%
CAGTCAAATGAACCAAGCCA+AGG + chr7_3:50242853-50242872 None:intergenic 45.0%
!! AATTATCAGGTACTGAGCCG+CGG + chr7_3:50243122-50243141 None:intergenic 45.0%
CAGAAACATGCTCCAGTCAT+AGG - chr7_3:50243289-50243308 Msa1107900:CDS 45.0%
ACACATGGTCACAATCGTAC+AGG - chr7_3:50243621-50243640 Msa1107900:CDS 45.0%
TCTGTTACTCAGGTCAGCAT+TGG - chr7_3:50243684-50243703 Msa1107900:intron 45.0%
!! CCCGAACTTGTTGATCTCAA+TGG - chr7_3:50243919-50243938 Msa1107900:intron 45.0%
!! GATGATGATGATGGAGTACC+AGG - chr7_3:50243967-50243986 Msa1107900:intron 45.0%
! ACACATGGTTTGGGTTTAGG+GGG - chr7_3:50244130-50244149 Msa1107900:intron 45.0%
! AACTTTCTTTGGGAGAGGTG+GGG - chr7_3:50244214-50244233 Msa1107900:CDS 45.0%
AGGAAAATTGCCACCCTACA+AGG + chr7_3:50244300-50244319 None:intergenic 45.0%
! GTAGGGTGGCAATTTTCCTT+TGG - chr7_3:50244301-50244320 Msa1107900:intron 45.0%
TACAATCTGCTCAAGCCGAA+GGG + chr7_3:50244367-50244386 None:intergenic 45.0%
ATACAATCTGCTCAAGCCGA+AGG + chr7_3:50244368-50244387 None:intergenic 45.0%
CTACATCTACCTATGACAGC+TGG - chr7_3:50244769-50244788 Msa1107900:intron 45.0%
TGTTAGTGTTAAGCTGTCGG+TGG + chr7_3:50244795-50244814 None:intergenic 45.0%
AGATACTCAAATTGGGGGCT+GGG - chr7_3:50245046-50245065 Msa1107900:intron 45.0%
! TTGTTTGTTAAGGGCCCGTT+TGG - chr7_3:50245187-50245206 Msa1107900:CDS 45.0%
GGATGTATTCTGCAGGTTGT+TGG - chr7_3:50245418-50245437 Msa1107900:intron 45.0%
TGGAAATTGCATGTGTCCTC+TGG + chr7_3:50245996-50246015 None:intergenic 45.0%
AGAGGACACATGCAATTTCC+AGG - chr7_3:50245995-50246014 Msa1107900:intron 45.0%
GAGGACACATGCAATTTCCA+GGG - chr7_3:50245996-50246015 Msa1107900:intron 45.0%
CACACCCAGTTTCTTTAGAC+AGG - chr7_3:50246020-50246039 Msa1107900:intron 45.0%
GAGAAGATGGAATGCTAGCT+AGG + chr7_3:50246279-50246298 None:intergenic 45.0%
ACATCATTTGCAACCCTGCA+TGG + chr7_3:50246699-50246718 None:intergenic 45.0%
CCCCATCAAGTAATGTGAAG+TGG + chr7_3:50246845-50246864 None:intergenic 45.0%
TTAGTCCTTTAGTTGAGGGC+TGG - chr7_3:50247418-50247437 Msa1107900:intron 45.0%
GCATCAGATACGAATACACG+AGG - chr7_3:50247444-50247463 Msa1107900:intron 45.0%
! CAGAAGCGCAATACATAGAG+AGG + chr7_3:50247559-50247578 None:intergenic 45.0%
CTCTCTATGTATTGCGCTTC+TGG - chr7_3:50247557-50247576 Msa1107900:intron 45.0%
AACTAAAGCACACCACAGCA+TGG + chr7_3:50247603-50247622 None:intergenic 45.0%
TGGTACCGTTCATGATTCCT+GGG + chr7_3:50247840-50247859 None:intergenic 45.0%
ATGGTACCGTTCATGATTCC+TGG + chr7_3:50247841-50247860 None:intergenic 45.0%
CGCAGATGGTCTCATATTTC+AGG - chr7_3:50248070-50248089 Msa1107900:intron 45.0%
!! ACCTGTGAGTAACTTGCTTC+TGG - chr7_3:50248153-50248172 Msa1107900:intron 45.0%
ACCAGAAGCAAGTTACTCAC+AGG + chr7_3:50248157-50248176 None:intergenic 45.0%
AGGTGATAGAGAACCAATGG+GGG + chr7_3:50248245-50248264 None:intergenic 45.0%
GAGGTGATAGAGAACCAATG+GGG + chr7_3:50248246-50248265 None:intergenic 45.0%
CGATGTCTCTTTAACTGGAC+TGG + chr7_3:50248348-50248367 None:intergenic 45.0%
!! ACCTAGACTAGCTTAGAGTC+TGG - chr7_3:50248399-50248418 Msa1107900:intron 45.0%
! TCCAGACTCTAAGCTAGTCT+AGG + chr7_3:50248403-50248422 None:intergenic 45.0%
AAGAGACCTTCATGAGTACG+AGG + chr7_3:50248555-50248574 None:intergenic 45.0%
AGTATTTAGGCAGGGGAAAG+AGG + chr7_3:50249103-50249122 None:intergenic 45.0%
! TTCTGGTGGGTGCTAGAAAT+TGG + chr7_3:50249303-50249322 None:intergenic 45.0%
! TCCATACCCAACTTTCTGGT+GGG + chr7_3:50249316-50249335 None:intergenic 45.0%
TTCCATACCCAACTTTCTGG+TGG + chr7_3:50249317-50249336 None:intergenic 45.0%
! TCAGACCCCATGCTTTATTC+TGG - chr7_3:50249490-50249509 Msa1107900:intron 45.0%
GAAAGATCATCGAGTGTGCT+TGG - chr7_3:50249512-50249531 Msa1107900:intron 45.0%
GGGATGGTGATAGAAACGAA+TGG - chr7_3:50249533-50249552 Msa1107900:intron 45.0%
TTCAGTCAACAGGACATCCT+CGG + chr7_3:50249733-50249752 None:intergenic 45.0%
CTTATCCTGTCGGCATACAT+GGG + chr7_3:50249777-50249796 None:intergenic 45.0%
TCTTATCCTGTCGGCATACA+TGG + chr7_3:50249778-50249797 None:intergenic 45.0%
GCAAAGGACATCATGTAGCT+AGG - chr7_3:50249805-50249824 Msa1107900:intron 45.0%
CTAGGCGAAAGTAATCAGTG+AGG - chr7_3:50249823-50249842 Msa1107900:intron 45.0%
GTCTGTAAAGCTTTCACTGG+TGG - chr7_3:50249854-50249873 Msa1107900:intron 45.0%
AACCGATACCGCTCAAATTC+AGG - chr7_3:50249990-50250009 Msa1107900:intron 45.0%
GTTTCAGGCCTGAATTTGAG+CGG + chr7_3:50250001-50250020 None:intergenic 45.0%
AGGCCTGAAACCATTTCTTG+TGG - chr7_3:50250010-50250029 Msa1107900:intron 45.0%
CAACATAGCTTCCACTAAGG+AGG + chr7_3:50250250-50250269 None:intergenic 45.0%
CTCCTTAGTGGAAGCTATGT+TGG - chr7_3:50250248-50250267 Msa1107900:five_prime_UTR 45.0%
TCCCAACATAGCTTCCACTA+AGG + chr7_3:50250253-50250272 None:intergenic 45.0%
!! ATTAAATATAAAAAATAACA+CGG - chr7_3:50240685-50240704 Msa1107900:CDS 5.0%
!! TATATTTATAACAAAAATTT+AGG + chr7_3:50248986-50249005 None:intergenic 5.0%
CAGAACGGTTCTCAGAGTGA+TGG + chr7_3:50240126-50240145 None:intergenic 50.0%
!! TGTGGCGGGTGAATGTTACT+TGG - chr7_3:50240827-50240846 Msa1107900:intron 50.0%
CTTGAATGCCTCTCCTTTGC+CGG - chr7_3:50240876-50240895 Msa1107900:intron 50.0%
TCTTCATCTTCCTCCGGCAA+AGG + chr7_3:50240892-50240911 None:intergenic 50.0%
!! TGAAGATCCTTTTGAGGGCC+AGG - chr7_3:50240906-50240925 Msa1107900:intron 50.0%
GCGCATTATACTCTTCGACC+TGG + chr7_3:50240927-50240946 None:intergenic 50.0%
GCGCAATATACTCTTCGACC+TGG + chr7_3:50240960-50240979 None:intergenic 50.0%
!! AAAGAGAGCGTCCAGATGAC+AGG - chr7_3:50241896-50241915 Msa1107900:intron 50.0%
AGGTGGCTGTGATACTTGCA+CGG + chr7_3:50241923-50241942 None:intergenic 50.0%
GATGGAAGTAAGCTTCCTCC+GGG - chr7_3:50241985-50242004 Msa1107900:intron 50.0%
AAGTAAGCTTCCTCCGGGTA+AGG - chr7_3:50241990-50242009 Msa1107900:intron 50.0%
CCAGGGAAGAAATCCTTACC+CGG + chr7_3:50242006-50242025 None:intergenic 50.0%
!!! TGTTCTTTTGGGGCTCTGAG+TGG - chr7_3:50242297-50242316 Msa1107900:intron 50.0%
!! TGTTACGTTGGCTTGCAGCT+TGG - chr7_3:50242887-50242906 Msa1107900:intron 50.0%
! GTTACTCAGGTCAGCATTGG+AGG - chr7_3:50243687-50243706 Msa1107900:intron 50.0%
! TTTTCTGATGCACGTCCTCC+AGG - chr7_3:50243796-50243815 Msa1107900:intron 50.0%
GCAGGACAGACTATCGTTTC+AGG + chr7_3:50243877-50243896 None:intergenic 50.0%
GATAGTCTGTCCTGCTACTC+CGG - chr7_3:50243882-50243901 Msa1107900:intron 50.0%
! ACTTTCTTTGGGAGAGGTGG+GGG - chr7_3:50244215-50244234 Msa1107900:CDS 50.0%
GTAACAATGGTGACCCCCTT+CGG - chr7_3:50244349-50244368 Msa1107900:intron 50.0%
ACAATCTGCTCAAGCCGAAG+GGG + chr7_3:50244366-50244385 None:intergenic 50.0%
ATGGGACATGGTCGTGTTTG+CGG - chr7_3:50244514-50244533 Msa1107900:intron 50.0%
CAGATACTCAAATTGGGGGC+TGG - chr7_3:50245045-50245064 Msa1107900:intron 50.0%
GATACTCAAATTGGGGGCTG+GGG - chr7_3:50245047-50245066 Msa1107900:intron 50.0%
TTGGTGGGGATGTATTCTGC+AGG - chr7_3:50245411-50245430 Msa1107900:intron 50.0%
GTTACAGAGGCTCCCAGTAA+AGG + chr7_3:50245606-50245625 None:intergenic 50.0%
TTTCTGAATGTGCAGGCCAG+AGG - chr7_3:50245977-50245996 Msa1107900:intron 50.0%
AAAGAAACTGGGTGTGACCC+TGG + chr7_3:50246016-50246035 None:intergenic 50.0%
CAACTGCGTGTCTGTGATAG+AGG - chr7_3:50246938-50246957 Msa1107900:intron 50.0%
CTGGTACAAACTTGGAGCAG+CGG - chr7_3:50247769-50247788 Msa1107900:intron 50.0%
ATCTTCCACCGCTCACAGAA+AGG + chr7_3:50247795-50247814 None:intergenic 50.0%
CTTCTGGTCTAATGCCAAGC+TGG - chr7_3:50248169-50248188 Msa1107900:intron 50.0%
GAAGCAGTATGCAGACCTTG+AGG + chr7_3:50248265-50248284 None:intergenic 50.0%
TGTATCAGTGGGCCTGTACT+TGG - chr7_3:50248935-50248954 Msa1107900:intron 50.0%
GTATCAGTGGGCCTGTACTT+GGG - chr7_3:50248936-50248955 Msa1107900:intron 50.0%
TTTAGGCAGGGGAAAGAGGA+GGG + chr7_3:50249099-50249118 None:intergenic 50.0%
ATTTAGGCAGGGGAAAGAGG+AGG + chr7_3:50249100-50249119 None:intergenic 50.0%
TCTAGCACCCACCAGAAAGT+TGG - chr7_3:50249306-50249325 Msa1107900:CDS 50.0%
CTAGCACCCACCAGAAAGTT+GGG - chr7_3:50249307-50249326 Msa1107900:CDS 50.0%
ACCCACCAGAAAGTTGGGTA+TGG - chr7_3:50249312-50249331 Msa1107900:CDS 50.0%
ATCATCGAGTGTGCTTGGGA+TGG - chr7_3:50249517-50249536 Msa1107900:intron 50.0%
GGCCTGAATTTGAGCGGTAT+CGG + chr7_3:50249995-50250014 None:intergenic 50.0%
!! TTGGGTACCGGTACCCTGTA+AGG - chr7_3:50240626-50240645 Msa1107900:intron 55.0%
! GGCGGGTGAATGTTACTTGG+TGG - chr7_3:50240830-50240849 Msa1107900:intron 55.0%
ATCTTCCTCCGGCAAAGGAG+AGG + chr7_3:50240887-50240906 None:intergenic 55.0%
TCTTCGACCTGGCCCTCAAA+AGG + chr7_3:50240916-50240935 None:intergenic 55.0%
GTGGAGCTGATATAGCTCGC+CGG - chr7_3:50240998-50241017 Msa1107900:intron 55.0%
TGGAGCTGATATAGCTCGCC+GGG - chr7_3:50240999-50241018 Msa1107900:intron 55.0%
CTTATCCCACTAAGCCGGGT+CGG + chr7_3:50241121-50241140 None:intergenic 55.0%
GGATTCCGGAAAACAGCGGT+TGG - chr7_3:50241252-50241271 Msa1107900:intron 55.0%
TAGCGGCGCTATAGCACTGT+TGG + chr7_3:50241286-50241305 None:intergenic 55.0%
GGTGGCTGTGATACTTGCAC+GGG + chr7_3:50241922-50241941 None:intergenic 55.0%
GTGCAAGTATCACAGCCACC+TGG - chr7_3:50241922-50241941 Msa1107900:intron 55.0%
GGGAAGAAATCCTTACCCGG+AGG + chr7_3:50242003-50242022 None:intergenic 55.0%
CCGGGTAAGGATTTCTTCCC+TGG - chr7_3:50242003-50242022 Msa1107900:intron 55.0%
GCTGCCTTGCTGGTGGTAAT+TGG - chr7_3:50242033-50242052 Msa1107900:intron 55.0%
TGGTTGGATTGCCCTTCGTC+TGG - chr7_3:50242529-50242548 Msa1107900:intron 55.0%
TAGATCCAATGCAAGGGCCG+CGG - chr7_3:50243102-50243121 Msa1107900:intron 55.0%
TGCTACTCCGGAGTGGAAGA+GGG - chr7_3:50243894-50243913 Msa1107900:intron 55.0%
CATACTTGCAACGGAGGACC+TGG + chr7_3:50243988-50244007 None:intergenic 55.0%
! TTTGGGTTTAGGGGGCCAAC+TGG - chr7_3:50244138-50244157 Msa1107900:intron 55.0%
CAATCTGCTCAAGCCGAAGG+GGG + chr7_3:50244365-50244384 None:intergenic 55.0%
GCTAGCCAGCCCTCAACTAA+AGG + chr7_3:50247426-50247445 None:intergenic 55.0%
TGGGAGAGGGAAATCCAGTG+TGG - chr7_3:50247502-50247521 Msa1107900:intron 55.0%
TCTGCGTCGTGTGAGAGCTT+CGG + chr7_3:50248056-50248075 None:intergenic 55.0%
AAGCTCTCACACGACGCAGA+TGG - chr7_3:50248056-50248075 Msa1107900:intron 55.0%
TGTCGGCATACATGGGAAGG+CGG + chr7_3:50249770-50249789 None:intergenic 55.0%
TCCTGTCGGCATACATGGGA+AGG + chr7_3:50249773-50249792 None:intergenic 55.0%
GAATGCCTCTCCTTTGCCGG+AGG - chr7_3:50240879-50240898 Msa1107900:intron 60.0%
ATGTAGCCGACCCGGCTTAG+TGG - chr7_3:50241112-50241131 Msa1107900:intron 60.0%
TGTAGCCGACCCGGCTTAGT+GGG - chr7_3:50241113-50241132 Msa1107900:intron 60.0%
CGACCCGGCTTAGTGGGATA+AGG - chr7_3:50241119-50241138 Msa1107900:intron 60.0%
ACTTGCACGGGCCTGTCATC+TGG + chr7_3:50241910-50241929 None:intergenic 60.0%
GCAAGGCAGCGAGTTGTCCA+GGG + chr7_3:50242023-50242042 None:intergenic 60.0%
AGCAAGGCAGCGAGTTGTCC+AGG + chr7_3:50242024-50242043 None:intergenic 60.0%
TGGACAACTCGCTGCCTTGC+TGG - chr7_3:50242023-50242042 Msa1107900:intron 60.0%
ACAACTCGCTGCCTTGCTGG+TGG - chr7_3:50242026-50242045 Msa1107900:intron 60.0%
!! CGTTGGCTTGCAGCTTGGTC+TGG - chr7_3:50242892-50242911 Msa1107900:intron 60.0%
TCTGTCCTGCTACTCCGGAG+TGG - chr7_3:50243887-50243906 Msa1107900:intron 60.0%
CTCTTCCACTCCGGAGTAGC+AGG + chr7_3:50243895-50243914 None:intergenic 60.0%
CTGCTACTCCGGAGTGGAAG+AGG - chr7_3:50243893-50243912 Msa1107900:intron 60.0%
TGTCGGTGGCCAGCTGTCAT+AGG + chr7_3:50244781-50244800 None:intergenic 60.0%
AGCAGCGGCCTTTCTGTGAG+CGG - chr7_3:50247784-50247803 Msa1107900:intron 60.0%
GGAAAGAGGAGGGCGGAAGA+GGG + chr7_3:50249089-50249108 None:intergenic 60.0%
GCCTTCCCATGTATGCCGAC+AGG - chr7_3:50249769-50249788 Msa1107900:intron 60.0%
GGATTGCCCTTCGTCTGGCC+AGG - chr7_3:50242534-50242553 Msa1107900:intron 65.0%
TCGGGAGCCCTCTTCCACTC+CGG + chr7_3:50243904-50243923 None:intergenic 65.0%
AGCGGCCTTTCTGTGAGCGG+TGG - chr7_3:50247787-50247806 Msa1107900:intron 65.0%
GGGAAAGAGGAGGGCGGAAG+AGG + chr7_3:50249090-50249109 None:intergenic 65.0%
AGGCAGGGGAAAGAGGAGGG+CGG + chr7_3:50249096-50249115 None:intergenic 65.0%
CTGAGCCGCGGCCCTTGCAT+TGG + chr7_3:50243110-50243129 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 50239940 50250303 50239940 ID=Msa1107900;Name=Msa1107900
chr7_3 mRNA 50239940 50250303 50239940 ID=Msa1107900-mRNA-1;Parent=Msa1107900;Name=Msa1107900-mRNA-1;_AED=0.13;_eAED=0.13;_QI=358|1|1|1|0.88|0.84|19|467|690
chr7_3 exon 50239940 50240541 50239940 ID=Msa1107900-mRNA-1:exon:10299;Parent=Msa1107900-mRNA-1
chr7_3 exon 50240628 50240758 50240628 ID=Msa1107900-mRNA-1:exon:10298;Parent=Msa1107900-mRNA-1
chr7_3 exon 50241422 50241503 50241422 ID=Msa1107900-mRNA-1:exon:10297;Parent=Msa1107900-mRNA-1
chr7_3 exon 50241623 50241712 50241623 ID=Msa1107900-mRNA-1:exon:10296;Parent=Msa1107900-mRNA-1
chr7_3 exon 50242152 50242250 50242152 ID=Msa1107900-mRNA-1:exon:10295;Parent=Msa1107900-mRNA-1
chr7_3 exon 50242341 50242454 50242341 ID=Msa1107900-mRNA-1:exon:10294;Parent=Msa1107900-mRNA-1
chr7_3 exon 50243284 50243421 50243284 ID=Msa1107900-mRNA-1:exon:10293;Parent=Msa1107900-mRNA-1
chr7_3 exon 50243527 50243689 50243527 ID=Msa1107900-mRNA-1:exon:10292;Parent=Msa1107900-mRNA-1
chr7_3 exon 50244202 50244251 50244202 ID=Msa1107900-mRNA-1:exon:10291;Parent=Msa1107900-mRNA-1
chr7_3 exon 50245175 50245294 50245175 ID=Msa1107900-mRNA-1:exon:10290;Parent=Msa1107900-mRNA-1
chr7_3 exon 50246241 50246459 50246241 ID=Msa1107900-mRNA-1:exon:10289;Parent=Msa1107900-mRNA-1
chr7_3 exon 50246548 50246679 50246548 ID=Msa1107900-mRNA-1:exon:10288;Parent=Msa1107900-mRNA-1
chr7_3 exon 50247076 50247138 50247076 ID=Msa1107900-mRNA-1:exon:10287;Parent=Msa1107900-mRNA-1
chr7_3 exon 50247255 50247338 50247255 ID=Msa1107900-mRNA-1:exon:10286;Parent=Msa1107900-mRNA-1
chr7_3 exon 50247565 50247716 50247565 ID=Msa1107900-mRNA-1:exon:10285;Parent=Msa1107900-mRNA-1
chr7_3 exon 50248237 50248375 50248237 ID=Msa1107900-mRNA-1:exon:10284;Parent=Msa1107900-mRNA-1
chr7_3 exon 50249223 50249468 50249223 ID=Msa1107900-mRNA-1:exon:10283;Parent=Msa1107900-mRNA-1
chr7_3 exon 50249912 50249956 50249912 ID=Msa1107900-mRNA-1:exon:10282;Parent=Msa1107900-mRNA-1
chr7_3 exon 50250075 50250303 50250075 ID=Msa1107900-mRNA-1:exon:10281;Parent=Msa1107900-mRNA-1
chr7_3 five_prime_UTR 50250075 50250303 50250075 ID=Msa1107900-mRNA-1:five_prime_utr;Parent=Msa1107900-mRNA-1
chr7_3 five_prime_UTR 50249912 50249956 50249912 ID=Msa1107900-mRNA-1:five_prime_utr;Parent=Msa1107900-mRNA-1
chr7_3 five_prime_UTR 50249385 50249468 50249385 ID=Msa1107900-mRNA-1:five_prime_utr;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50249223 50249384 50249223 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50248237 50248375 50248237 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50247565 50247716 50247565 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50247255 50247338 50247255 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50247076 50247138 50247076 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50246548 50246679 50246548 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50246241 50246459 50246241 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50245175 50245294 50245175 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50244202 50244251 50244202 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50243527 50243689 50243527 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50243284 50243421 50243284 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50242341 50242454 50242341 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50242152 50242250 50242152 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50241623 50241712 50241623 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50241422 50241503 50241422 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50240628 50240758 50240628 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 CDS 50240407 50240541 50240407 ID=Msa1107900-mRNA-1:cds;Parent=Msa1107900-mRNA-1
chr7_3 three_prime_UTR 50239940 50240406 50239940 ID=Msa1107900-mRNA-1:three_prime_utr;Parent=Msa1107900-mRNA-1
Gene Sequence

>Msa1107900

ATGACAATTTCTATGGACTTGAATGCCTCTCCTTTGCCGGAGGAAGATGAAGATCCTTTTGAGGGCCAGGTCGAAGAGTATAATGCGCCAAAAAAGGACCAGGTCGAAGAGTATATTGCGCCAGAAGAGCACATAGAAAGTGGAGCTGATATAGCTCGCCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAAAGAGAGCGTCCAGATGACAGGCCCGTGCAAGTATCACAGCCACCTGGATATGATAATTTTTTCCATAATAAGATCCTTAAATCATATGATGGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTCGTCTGGCCAGGAAATTTTCGGCATGATACCTTCTAAGGTTCCATTGGGTGAATCCTTCACTGACGATATTTTACCTGGTAAAAGATACTCATTTAGACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTGGTCATTGATCTGACAAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGCAAGGGCCGCGGCTCAGTACCTGATAATTCATCTGTCAATCACTTTGTGTACGAGGTTAGACAATTTTTATCGTGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCACAATCGTACAGGATATATGATTGTCCATTATCTAATGCGCACAATGTCAATGTCTGTTACTCAGGCGATAAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTCTATCATGAAAAAAAGCCTGAAACGATAGTCTGTCCTGCTACTCCGGAGTGGAAGAGGGCTCCCGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAGATAATGATGACGATGATGATGATGGAGTACCAGGTCCTCCGTTGCAAGAGAACCATGAGATTGACACAATAATGACAAACGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAAGATGCATTTCGGCAGTTCTGCTTTCAGATACTCAAATTGGGGGCTGGGGCCAGAGGACACATGCAATTTCCAGGGTCACACCCAGTTTCTTTAGACAGGGAAAATTTACAGCTGCTACGCCAGCGTTACTACTATGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTTCTTGATTGATAGAAACTTCAATTTTAGAAGGATTCAAATGAGGTTTCCATGCAGGGTTGCAAATGATGGCTTGGCAGAGAAGACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACAGTGCCAAATTCAAAAAAGCAGGCAAGGAGATACCTAATATATGATCTGATGGCGGTCAACTGCGTGTCTGTGATAGAGCGGCCTTTCTGTGAGCGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCATGAACGGTACCATCGCAAACATCCTTACTATATATATGACATGGAGCCTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTGACAAAACTTTTGAATGAATTCATTCCGAAGCTCTCACACGACGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGTACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGCTCTGAATTCAGTTGATTTTCTCTTTGAGATTGTTGCTGATCGTCAGCTACTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTTTATTGTTGCATTTGAAGAAGGTTCAGACCCCATGCTTTATTCTGGAAAGATCATCGAGTGTGCTTGGGATGGTGATAGAAACGAATGGATATTCAAGCGAGTCAGAACAGATAAGTCAACTCCCAATGACTTCAATACTTACAAGAAGGTGATGCGAAGCATAAAAGACAATATCACCGAGGATGTCCTGTTGACTGAAATAAACGAGATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAATCGATAGCAAAGGACATCATGTAGCTAGGCGAAAGTAA
Protein sequence

>Msa1107900

MTISMDLNASPLPEEDEDPFEGQVEEYNAPKKDQVEEYIAPEEHIESGADIARREREERKKRLKRERPDDRPVQVSQPPGYDNFFHNKILKSYDGSKLPPGWLDCPSSGQEIFGMIPSKVPLGESFTDDILPGKRYSFRQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVYEVRQFLSCQKHSKKYILVHCTHGHNRTGYMIVHYLMRTMSMSVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPETIVCPATPEWKRAPELVDLNGEAAPDNDDDDDDGVPGPPLQENHEIDTIMTNDDVLGDEIPNDQQDAFRQFCFQILKLGAGARGHMQFPGSHPVSLDRENLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRNFNFRRIQMRFPCRVANDGLAEKTHHFTLLDGEMIIDTVPNSKKQARRYLIYDLMAVNCVSVIERPFCERWKMLEKEVIEPRNHERYHRKHPYYIYDMEPFRVRRKDFWLLSAVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYAALNSVDFLFEIVADRQLLFLYERGKKKLMEGFIVAFEEGSDPMLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDFNTYKKVMRSIKDNITEDVLLTEINEIIRLPMYADRIRIDSKGHHVARRK*