Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084430 | AES82055.2 | 95.515 | 379 | 15 | 1 | 1 | 379 | 25 | 401 | 0.0 | 727 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084430 | sp|Q9FVS1|FBK23_ARATH | 44.789 | 355 | 182 | 6 | 24 | 374 | 3 | 347 | 3.40e-100 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084430 | G7KQW3 | 95.515 | 379 | 15 | 1 | 1 | 379 | 25 | 401 | 0.0 | 727 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020410 | Msa1084430 | 0.813932 | 1.992737e-51 | -8.615850e-47 |
| Msa0026430 | Msa1084430 | 0.808325 | 3.273835e-50 | -8.615850e-47 |
| Msa0035150 | Msa1084430 | 0.804754 | 1.855516e-49 | -8.615850e-47 |
| Msa0036140 | Msa1084430 | 0.803219 | 3.869886e-49 | -8.615850e-47 |
| Msa0043980 | Msa1084430 | 0.831151 | 1.964326e-55 | -8.615850e-47 |
| Msa0083280 | Msa1084430 | 0.809985 | 1.443539e-50 | -8.615850e-47 |
| Msa0084080 | Msa1084430 | 0.818203 | 2.215282e-52 | -8.615850e-47 |
| Msa0089360 | Msa1084430 | 0.809687 | 1.672523e-50 | -8.615850e-47 |
| Msa0090360 | Msa1084430 | 0.812203 | 4.770551e-51 | -8.615850e-47 |
| Msa0095560 | Msa1084430 | 0.817973 | 2.497726e-52 | -8.615850e-47 |
| Msa0096450 | Msa1084430 | 0.802930 | 4.441246e-49 | -8.615850e-47 |
| Msa0104800 | Msa1084430 | 0.815962 | 7.066082e-52 | -8.615850e-47 |
| Msa0624060 | Msa1084430 | 0.804229 | 2.387936e-49 | -8.615850e-47 |
| Msa0657750 | Msa1084430 | 0.810250 | 1.265607e-50 | -8.615850e-47 |
| Msa0676130 | Msa1084430 | 0.800162 | 1.640553e-48 | -8.615850e-47 |
| Msa0676180 | Msa1084430 | 0.803064 | 4.166272e-49 | -8.615850e-47 |
| Msa0685090 | Msa1084430 | 0.801828 | 7.489847e-49 | -8.615850e-47 |
| Msa0688070 | Msa1084430 | 0.805408 | 1.354032e-49 | -8.615850e-47 |
| Msa0692040 | Msa1084430 | -0.807107 | 5.940958e-50 | -8.615850e-47 |
| Msa0716960 | Msa1084430 | 0.804065 | 2.582797e-49 | -8.615850e-47 |
| Msa0717010 | Msa1084430 | 0.809030 | 2.313795e-50 | -8.615850e-47 |
| Msa0722070 | Msa1084430 | 0.801515 | 8.683197e-49 | -8.615850e-47 |
| Msa0740510 | Msa1084430 | 0.843917 | 1.043510e-58 | -8.615850e-47 |
| Msa0740640 | Msa1084430 | 0.804586 | 2.011894e-49 | -8.615850e-47 |
| Msa0756060 | Msa1084430 | 0.810433 | 1.155467e-50 | -8.615850e-47 |
| Msa0756540 | Msa1084430 | 0.802672 | 5.020950e-49 | -8.615850e-47 |
| Msa0763890 | Msa1084430 | 0.812819 | 3.500127e-51 | -8.615850e-47 |
| Msa0773590 | Msa1084430 | 0.813705 | 2.235779e-51 | -8.615850e-47 |
| Msa0790890 | Msa1084430 | 0.975200 | 1.610964e-139 | -8.615850e-47 |
| Msa0795250 | Msa1084430 | 0.847758 | 9.442700e-60 | -8.615850e-47 |
| Msa0798430 | Msa1084430 | 0.806572 | 7.706615e-50 | -8.615850e-47 |
| Msa0805420 | Msa1084430 | 0.804931 | 1.704404e-49 | -8.615850e-47 |
| Msa0805550 | Msa1084430 | 0.816533 | 5.264917e-52 | -8.615850e-47 |
| Msa0811040 | Msa1084430 | 0.815318 | 9.831834e-52 | -8.615850e-47 |
| Msa0820770 | Msa1084430 | 0.849109 | 3.992026e-60 | -8.615850e-47 |
| Msa0828920 | Msa1084430 | 0.800092 | 1.694637e-48 | -8.615850e-47 |
| Msa0832340 | Msa1084430 | 0.816344 | 5.803764e-52 | -8.615850e-47 |
| Msa0832700 | Msa1084430 | 0.815130 | 1.082165e-51 | -8.615850e-47 |
| Msa0835280 | Msa1084430 | 0.803806 | 2.924257e-49 | -8.615850e-47 |
| Msa0123560 | Msa1084430 | 0.804356 | 2.246624e-49 | -8.615850e-47 |
| Msa0126370 | Msa1084430 | 0.802616 | 5.154874e-49 | -8.615850e-47 |
| Msa0137840 | Msa1084430 | 0.802762 | 4.810619e-49 | -8.615850e-47 |
| Msa0151180 | Msa1084430 | 0.839494 | 1.532649e-57 | -8.615850e-47 |
| Msa0166870 | Msa1084430 | 0.822943 | 1.806995e-53 | -8.615850e-47 |
| Msa0171120 | Msa1084430 | 0.812589 | 3.929926e-51 | -8.615850e-47 |
| Msa0184040 | Msa1084430 | 0.812499 | 4.112181e-51 | -8.615850e-47 |
| Msa0205510 | Msa1084430 | 0.810882 | 9.239615e-51 | -8.615850e-47 |
| Msa0206010 | Msa1084430 | 0.822676 | 2.085826e-53 | -8.615850e-47 |
| Msa0207030 | Msa1084430 | 0.800139 | 1.658063e-48 | -8.615850e-47 |
| Msa0218370 | Msa1084430 | 0.814518 | 1.479001e-51 | -8.615850e-47 |
| Msa0220440 | Msa1084430 | 0.817819 | 2.705589e-52 | -8.615850e-47 |
| Msa0237310 | Msa1084430 | 0.813337 | 2.693227e-51 | -8.615850e-47 |
| Msa0237410 | Msa1084430 | 0.804162 | 2.465567e-49 | -8.615850e-47 |
| Msa0376350 | Msa1084430 | 0.818996 | 1.464166e-52 | -8.615850e-47 |
| Msa0376910 | Msa1084430 | 0.809383 | 1.944329e-50 | -8.615850e-47 |
| Msa0379640 | Msa1084430 | 0.822618 | 2.150842e-53 | -8.615850e-47 |
| Msa0393080 | Msa1084430 | 0.801574 | 8.443913e-49 | -8.615850e-47 |
| Msa0424790 | Msa1084430 | 0.809259 | 2.067435e-50 | -8.615850e-47 |
| Msa0426900 | Msa1084430 | 0.829983 | 3.793709e-55 | -8.615850e-47 |
| Msa0428930 | Msa1084430 | 0.808345 | 3.242147e-50 | -8.615850e-47 |
| Msa0433360 | Msa1084430 | 0.815439 | 9.240732e-52 | -8.615850e-47 |
| Msa0439970 | Msa1084430 | 0.809352 | 1.973829e-50 | -8.615850e-47 |
| Msa0440750 | Msa1084430 | 0.803148 | 4.003313e-49 | -8.615850e-47 |
| Msa0453350 | Msa1084430 | 0.815006 | 1.153378e-51 | -8.615850e-47 |
| Msa0471900 | Msa1084430 | 0.808929 | 2.432297e-50 | -8.615850e-47 |
| Msa1010350 | Msa1084430 | 0.820739 | 5.849291e-53 | -8.615850e-47 |
| Msa1023920 | Msa1084430 | 0.836300 | 1.014640e-56 | -8.615850e-47 |
| Msa1034150 | Msa1084430 | 0.827711 | 1.345368e-54 | -8.615850e-47 |
| Msa1036300 | Msa1084430 | 0.810515 | 1.109377e-50 | -8.615850e-47 |
| Msa1041670 | Msa1084430 | 0.815541 | 8.770056e-52 | -8.615850e-47 |
| Msa1043390 | Msa1084430 | 0.807586 | 4.702341e-50 | -8.615850e-47 |
| Msa1058750 | Msa1084430 | 0.803273 | 3.771266e-49 | -8.615850e-47 |
| Msa1062920 | Msa1084430 | 0.815137 | 1.078686e-51 | -8.615850e-47 |
| Msa1065610 | Msa1084430 | 0.807092 | 5.983049e-50 | -8.615850e-47 |
| Msa1080270 | Msa1084430 | 0.830334 | 3.114150e-55 | -8.615850e-47 |
| Msa1084430 | Msa1107900 | 0.835914 | 1.271067e-56 | -8.615850e-47 |
| Msa1084430 | Msa1125400 | 0.903563 | 3.048096e-79 | -8.615850e-47 |
| Msa1084430 | Msa1125660 | 0.911352 | 6.705606e-83 | -8.615850e-47 |
| Msa1084430 | Msa1125680 | 0.901529 | 2.443679e-78 | -8.615850e-47 |
| Msa1084430 | Msa1125720 | 0.926657 | 3.468560e-91 | -8.615850e-47 |
| Msa1084430 | Msa1131220 | 0.800287 | 1.546832e-48 | -8.615850e-47 |
| Msa1084430 | Msa1144890 | 0.804828 | 1.790743e-49 | -8.615850e-47 |
| Msa1084430 | Msa1151720 | 0.829145 | 6.061805e-55 | -8.615850e-47 |
| Msa1084430 | Msa1151910 | 0.819199 | 1.316599e-52 | -8.615850e-47 |
| Msa1084430 | Msa1166560 | 0.815555 | 8.705181e-52 | -8.615850e-47 |
| Msa1084430 | Msa1170170 | 0.942822 | 3.632877e-102 | -8.615850e-47 |
| Msa1084430 | Msa1171400 | 0.904418 | 1.253753e-79 | -8.615850e-47 |
| Msa1084430 | Msa1174040 | 0.816653 | 4.949755e-52 | -8.615850e-47 |
| Msa1084430 | Msa1189070 | 0.801051 | 1.080360e-48 | -8.615850e-47 |
| Msa1084430 | Msa1201560 | 0.811509 | 6.756228e-51 | -8.615850e-47 |
| Msa1084430 | Msa1206100 | 0.812993 | 3.205267e-51 | -8.615850e-47 |
| Msa1084430 | Msa1223870 | 0.810185 | 1.307026e-50 | -8.615850e-47 |
| Msa1084430 | Msa1224480 | 0.809504 | 1.831784e-50 | -8.615850e-47 |
| Msa1084430 | Msa1234000 | 0.814480 | 1.507741e-51 | -8.615850e-47 |
| Msa1084430 | Msa1234070 | 0.812262 | 4.630745e-51 | -8.615850e-47 |
| Msa1084430 | Msa1244610 | 0.802281 | 6.044809e-49 | -8.615850e-47 |
| Msa1084430 | Msa1250530 | 0.821978 | 3.028732e-53 | -8.615850e-47 |
| Msa1084430 | Msa1284550 | 0.806350 | 8.585950e-50 | -8.615850e-47 |
| Msa1084430 | Msa1292400 | 0.806037 | 9.989658e-50 | -8.615850e-47 |
| Msa1084430 | Msa1294480 | 0.817423 | 3.323920e-52 | -8.615850e-47 |
| Msa1084430 | Msa1297290 | 0.802112 | 6.546057e-49 | -8.615850e-47 |
| Msa1084430 | Msa1305340 | 0.813965 | 1.959989e-51 | -8.615850e-47 |
| Msa1084430 | Msa1305660 | 0.820005 | 8.619439e-53 | -8.615850e-47 |
| Msa1084430 | Msa1305710 | 0.807095 | 5.975480e-50 | -8.615850e-47 |
| Msa1084430 | Msa1314340 | 0.803537 | 3.324585e-49 | -8.615850e-47 |
| Msa1084430 | Msa1327640 | 0.807268 | 5.491765e-50 | -8.615850e-47 |
| Msa1084430 | Msa1329550 | 0.810328 | 1.217461e-50 | -8.615850e-47 |
| Msa1084430 | Msa1341950 | 0.811829 | 5.757424e-51 | -8.615850e-47 |
| Msa1084430 | Msa1342900 | 0.805059 | 1.602563e-49 | -8.615850e-47 |
| Msa1084430 | Msa1346730 | 0.815506 | 8.925960e-52 | -8.615850e-47 |
| Msa1084430 | Msa1353470 | 0.801355 | 9.363259e-49 | -8.615850e-47 |
| Msa1084430 | Msa1367590 | 0.810659 | 1.032888e-50 | -8.615850e-47 |
| Msa1084430 | Msa1370070 | -0.800402 | 1.465648e-48 | -8.615850e-47 |
| Msa1084430 | Msa1397120 | 0.810703 | 1.010411e-50 | -8.615850e-47 |
| Msa1084430 | Msa1402400 | 0.807115 | 5.917297e-50 | -8.615850e-47 |
| Msa1084430 | Msa1403890 | 0.815800 | 7.678440e-52 | -8.615850e-47 |
| Msa1084430 | Msa1404300 | 0.804363 | 2.239171e-49 | -8.615850e-47 |
| Msa1084430 | Msa1407600 | 0.834354 | 3.146227e-56 | -8.615850e-47 |
| Msa1084430 | Msa1417200 | 0.807844 | 4.145251e-50 | -8.615850e-47 |
| Msa1084430 | Msa1424450 | 0.804499 | 2.097489e-49 | -8.615850e-47 |
| Msa1084430 | Msa1433390 | 0.813308 | 2.733847e-51 | -8.615850e-47 |
| Msa1084430 | Msa1435270 | 0.802491 | 5.470875e-49 | -8.615850e-47 |
| Msa1084430 | Msa1443850 | 0.802942 | 4.415727e-49 | -8.615850e-47 |
| Msa1084430 | Msa1445030 | 0.801944 | 7.090438e-49 | -8.615850e-47 |
| Msa1084430 | Msa1449520 | 0.800669 | 1.293026e-48 | -8.615850e-47 |
| Msa1084430 | Msa1451970 | 0.907237 | 6.293918e-81 | -8.615850e-47 |
| Msa1084430 | Msa1452240 | 0.809873 | 1.525813e-50 | -8.615850e-47 |
| Msa1084430 | Msa1458610 | 0.825944 | 3.555150e-54 | -8.615850e-47 |
| Msa1084430 | Msa1459950 | 0.810733 | 9.953727e-51 | -8.615850e-47 |
| Msa1084430 | Msa1462290 | 0.840710 | 7.381201e-58 | -8.615850e-47 |
| Msa0242430 | Msa1084430 | 0.811405 | 7.116000e-51 | -8.615850e-47 |
| Msa0249200 | Msa1084430 | 0.822408 | 2.407088e-53 | -8.615850e-47 |
| Msa0253200 | Msa1084430 | 0.811447 | 6.969631e-51 | -8.615850e-47 |
| Msa0270960 | Msa1084430 | 0.810214 | 1.288365e-50 | -8.615850e-47 |
| Msa0274730 | Msa1084430 | 0.812257 | 4.642484e-51 | -8.615850e-47 |
| Msa0286670 | Msa1084430 | 0.803456 | 3.456661e-49 | -8.615850e-47 |
| Msa0287410 | Msa1084430 | 0.836922 | 7.045144e-57 | -8.615850e-47 |
| Msa0292030 | Msa1084430 | 0.811191 | 7.922015e-51 | -8.615850e-47 |
| Msa0315290 | Msa1084430 | 0.804082 | 2.562639e-49 | -8.615850e-47 |
| Msa0315530 | Msa1084430 | 0.817051 | 4.029688e-52 | -8.615850e-47 |
| Msa0319170 | Msa1084430 | 0.800070 | 1.712082e-48 | -8.615850e-47 |
| Msa0326110 | Msa1084430 | 0.817132 | 3.865061e-52 | -8.615850e-47 |
| Msa0336290 | Msa1084430 | 0.812121 | 4.972366e-51 | -8.615850e-47 |
| Msa0341540 | Msa1084430 | 0.808628 | 2.821195e-50 | -8.615850e-47 |
| Msa0346430 | Msa1084430 | 0.800018 | 1.754612e-48 | -8.615850e-47 |
| Msa0363790 | Msa1084430 | 0.826258 | 2.993910e-54 | -8.615850e-47 |
| Msa0516170 | Msa1084430 | 0.821381 | 4.161897e-53 | -8.615850e-47 |
| Msa0524500 | Msa1084430 | 0.806109 | 9.647442e-50 | -8.615850e-47 |
| Msa0542290 | Msa1084430 | 0.804448 | 2.150037e-49 | -8.615850e-47 |
| Msa0547160 | Msa1084430 | 0.803485 | 3.409200e-49 | -8.615850e-47 |
| Msa0547890 | Msa1084430 | 0.804933 | 1.703063e-49 | -8.615850e-47 |
| Msa0575470 | Msa1084430 | 0.818191 | 2.229866e-52 | -8.615850e-47 |
| Msa0842770 | Msa1084430 | 0.811242 | 7.720320e-51 | -8.615850e-47 |
| Msa0861090 | Msa1084430 | 0.843946 | 1.025025e-58 | -8.615850e-47 |
| Msa0861540 | Msa1084430 | 0.813134 | 2.984888e-51 | -8.615850e-47 |
| Msa0905730 | Msa1084430 | 0.803235 | 3.840317e-49 | -8.615850e-47 |
| Msa0933100 | Msa1084430 | 0.819232 | 1.294230e-52 | -8.615850e-47 |
| Msa0933230 | Msa1084430 | 0.819873 | 9.238074e-53 | -8.615850e-47 |
| Msa0933310 | Msa1084430 | 0.825008 | 5.923418e-54 | -8.615850e-47 |
| Msa0966400 | Msa1084430 | 0.804032 | 2.624898e-49 | -8.615850e-47 |
| Msa0969520 | Msa1084430 | 0.816969 | 4.204294e-52 | -8.615850e-47 |
| Msa0971090 | Msa1084430 | 0.824037 | 1.002652e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084430 | MtrunA17_Chr7g0266441 | 95.515 | 379 | 15 | 1 | 1 | 379 | 1 | 377 | 0.0 | 725 |
| Msa1084430 | MtrunA17_Chr1g0178491 | 64.042 | 381 | 125 | 6 | 2 | 377 | 1 | 374 | 5.40e-173 | 487 |
| Msa1084430 | MtrunA17_Chr7g0266431 | 87.234 | 188 | 23 | 1 | 189 | 375 | 2 | 189 | 8.98e-120 | 344 |
| Msa1084430 | MtrunA17_Chr7g0266421 | 86.667 | 90 | 12 | 0 | 14 | 103 | 10 | 99 | 1.78e-48 | 160 |
| Msa1084430 | MtrunA17_Chr3g0143611 | 25.826 | 333 | 185 | 14 | 34 | 329 | 5 | 312 | 7.78e-14 | 72.0 |
| Msa1084430 | MtrunA17_Chr2g0294691 | 29.814 | 161 | 101 | 5 | 214 | 371 | 43 | 194 | 7.88e-13 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1084430 | AT1G57790.1 | 44.789 | 355 | 182 | 6 | 24 | 374 | 3 | 347 | 3.45e-101 | 303 |
| Msa1084430 | AT3G56470.1 | 41.880 | 351 | 179 | 7 | 32 | 376 | 27 | 358 | 3.96e-82 | 255 |
| Msa1084430 | AT4G00893.1 | 39.489 | 352 | 198 | 8 | 33 | 378 | 44 | 386 | 2.06e-79 | 249 |
| Msa1084430 | AT4G10660.1 | 41.000 | 300 | 161 | 6 | 62 | 354 | 3 | 293 | 9.08e-68 | 217 |
| Msa1084430 | AT4G12370.1 | 38.835 | 309 | 170 | 8 | 81 | 379 | 1 | 300 | 1.48e-67 | 216 |
| Msa1084430 | AT1G49360.5 | 34.527 | 391 | 213 | 15 | 8 | 372 | 61 | 434 | 6.97e-52 | 179 |
| Msa1084430 | AT1G49360.1 | 34.527 | 391 | 213 | 15 | 8 | 372 | 84 | 457 | 1.31e-51 | 179 |
| Msa1084430 | AT1G49360.3 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1084430 | AT1G49360.2 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1084430 | AT1G49360.4 | 35.813 | 363 | 192 | 14 | 37 | 373 | 8 | 355 | 1.76e-51 | 176 |
| Msa1084430 | AT3G18720.1 | 34.085 | 355 | 189 | 11 | 36 | 374 | 51 | 376 | 2.35e-50 | 173 |
| Msa1084430 | AT4G10695.2 | 43.216 | 199 | 97 | 3 | 46 | 238 | 1 | 189 | 3.88e-48 | 163 |
| Msa1084430 | AT4G10695.1 | 43.216 | 199 | 97 | 3 | 46 | 238 | 1 | 189 | 3.88e-48 | 163 |
| Msa1084430 | AT4G12382.1 | 45.455 | 132 | 66 | 2 | 33 | 164 | 9 | 134 | 1.37e-35 | 127 |
| Msa1084430 | AT4G12382.2 | 45.455 | 132 | 66 | 2 | 33 | 164 | 9 | 134 | 1.37e-35 | 127 |
| Msa1084430 | AT2G44735.1 | 40.260 | 154 | 78 | 5 | 139 | 288 | 109 | 252 | 5.73e-23 | 99.4 |
| Msa1084430 | AT4G10700.1 | 41.270 | 126 | 66 | 3 | 258 | 376 | 119 | 243 | 1.19e-20 | 90.5 |
| Msa1084430 | AT4G10700.1 | 47.312 | 93 | 43 | 2 | 62 | 154 | 3 | 89 | 4.02e-20 | 89.0 |
Find 102 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATCTAACTTGAAAATTAT+TGG | 0.158009 | 7_2:-84803836 | None:intergenic |
| GAACCACCAAAAGACTTTAT+TGG | 0.163822 | 7_2:+84804097 | Msa1084430:CDS |
| CAGAAGTTCTCAAAAGTATT+TGG | 0.184683 | 7_2:-84804070 | None:intergenic |
| TTCCCTAAAGTCCGTTTCTA+TGG | 0.238841 | 7_2:+84803974 | Msa1084430:CDS |
| AGCTAAAATATTTATCTCTT+TGG | 0.254305 | 7_2:+84805393 | Msa1084430:three_prime_UTR |
| CCTATGTACAACCTTCAAAT+AGG | 0.266334 | 7_2:-84805332 | None:intergenic |
| TTTCCATAGAAACGGACTTT+AGG | 0.272121 | 7_2:-84803977 | None:intergenic |
| GATCTAACTTGAAAATTATT+GGG | 0.325599 | 7_2:-84803835 | None:intergenic |
| CTCTCTTTAATCCCTTTACT+AGG | 0.326943 | 7_2:+84803402 | Msa1084430:CDS |
| CAAGTTAGATCTGACACTAA+TGG | 0.329403 | 7_2:+84803847 | Msa1084430:CDS |
| ATCCAGCCAATAAAGTCTTT+TGG | 0.339525 | 7_2:-84804103 | None:intergenic |
| AGAACTCTCTGCTAAGCATT+TGG | 0.351257 | 7_2:-84803729 | None:intergenic |
| TTGACCCACTTGAACGTACT+TGG | 0.354769 | 7_2:+84803684 | Msa1084430:CDS |
| TTCCATAGAAACGGACTTTA+GGG | 0.361226 | 7_2:-84803976 | None:intergenic |
| AACATTCTTCGCATGATGTC+GGG | 0.375799 | 7_2:+84802472 | Msa1084430:exon |
| TCTTGTCTCGGTTGGATGTT+GGG | 0.383783 | 7_2:+84803123 | Msa1084430:CDS |
| CCATGTTTGAGTGAAGCATT+TGG | 0.387770 | 7_2:+84805221 | Msa1084430:three_prime_UTR |
| GCTATAAGCACGTGTTATCC+TGG | 0.393896 | 7_2:+84803542 | Msa1084430:CDS |
| ATGTTCCACAAAAGCATTGC+AGG | 0.397891 | 7_2:-84805456 | None:intergenic |
| TCTTGTGCTCCAACATCAAC+TGG | 0.401697 | 7_2:+84803476 | Msa1084430:CDS |
| GAACTCTCTGCTAAGCATTT+GGG | 0.407425 | 7_2:-84803728 | None:intergenic |
| ATGGTTGGTTATTGCTAAAC+CGG | 0.409750 | 7_2:+84803342 | Msa1084430:CDS |
| GGAATTGTTCTTGTCTCGGT+TGG | 0.421431 | 7_2:+84803115 | Msa1084430:CDS |
| GATTAGCAAAACCTATTTGA+AGG | 0.423915 | 7_2:+84805321 | Msa1084430:three_prime_UTR |
| TTCCCTTGAGTTGCCAGAGT+TGG | 0.426018 | 7_2:+84803292 | Msa1084430:CDS |
| CTGCTTGTCGTGCAGGAACT+AGG | 0.426509 | 7_2:+84805172 | Msa1084430:intron |
| AACAATTCCAAGACTTCAGC+AGG | 0.429634 | 7_2:-84803101 | None:intergenic |
| TTCTTGTCTCGGTTGGATGT+TGG | 0.436225 | 7_2:+84803122 | Msa1084430:CDS |
| TCTTGGAATTGTTCTTGTCT+CGG | 0.438217 | 7_2:+84803111 | Msa1084430:CDS |
| TATTGCTAAACCGGCAGGAC+TGG | 0.447316 | 7_2:+84803351 | Msa1084430:CDS |
| ACAATTTGGAGCTGCAAACA+TGG | 0.451046 | 7_2:+84803069 | Msa1084430:CDS |
| TTCGCATGATGTCGGGGAAA+AGG | 0.455236 | 7_2:+84802479 | Msa1084430:exon |
| CTCTGGCAACTCAAGGGAAT+AGG | 0.460842 | 7_2:-84803288 | None:intergenic |
| CGATCTCCCTGCTGAAGTCT+TGG | 0.469551 | 7_2:+84803094 | Msa1084430:CDS |
| AAAGAGGTGAGAACACTAGA+TGG | 0.470190 | 7_2:+84803875 | Msa1084430:CDS |
| GAATAGGTCTTACGCTGCAC+AGG | 0.470767 | 7_2:-84803272 | None:intergenic |
| TCTCTTTAATCCCTTTACTA+GGG | 0.471216 | 7_2:+84803403 | Msa1084430:CDS |
| ATGTGGTCCTTTGATGTCAC+AGG | 0.471463 | 7_2:+84805282 | Msa1084430:three_prime_UTR |
| TGATATGTCCTGTCAAACTT+TGG | 0.477303 | 7_2:-84803440 | None:intergenic |
| AATACATAAGCCAAGGTGAT+TGG | 0.482476 | 7_2:-84803214 | None:intergenic |
| CTTGAGTTGCCAGAGTTGGA+TGG | 0.483726 | 7_2:+84803296 | Msa1084430:CDS |
| CCTGTCACGACACTGCTCAC+TGG | 0.484710 | 7_2:-84804041 | None:intergenic |
| GTGATCAGATCCCTAGTAAA+GGG | 0.491655 | 7_2:-84803413 | None:intergenic |
| CTGTCACGACACTGCTCACT+GGG | 0.495007 | 7_2:-84804040 | None:intergenic |
| CACCAAAAGACTTTATTGGC+TGG | 0.495682 | 7_2:+84804101 | Msa1084430:CDS |
| CTGAGCGACAGAGGTTGGCT+AGG | 0.495793 | 7_2:+84803656 | Msa1084430:CDS |
| TGAGCGACAGAGGTTGGCTA+GGG | 0.496901 | 7_2:+84803657 | Msa1084430:CDS |
| CCAACCTCCGCCAGTCCTGC+CGG | 0.497826 | 7_2:-84803361 | None:intergenic |
| CCAGTGAGCAGTGTCGTGAC+AGG | 0.497864 | 7_2:+84804041 | Msa1084430:CDS |
| CGTGTTTGCTATACAAAAGA+TGG | 0.502296 | 7_2:+84803323 | Msa1084430:CDS |
| CTATAAGCACGTGTTATCCT+GGG | 0.505414 | 7_2:+84803543 | Msa1084430:CDS |
| CAGGACTGGCGGAGGTTGGA+CGG | 0.511557 | 7_2:+84803365 | Msa1084430:CDS |
| CTTCAGCTGTTTGCAAGAGA+TGG | 0.513153 | 7_2:+84803159 | Msa1084430:CDS |
| CCTATTTGAAGGTTGTACAT+AGG | 0.514646 | 7_2:+84805332 | Msa1084430:three_prime_UTR |
| CCGGCAGGACTGGCGGAGGT+TGG | 0.523905 | 7_2:+84803361 | Msa1084430:CDS |
| ATTGTCTGAGCGACAGAGGT+TGG | 0.524197 | 7_2:+84803651 | Msa1084430:CDS |
| CAAGACTTCAGCAGGGAGAT+CGG | 0.525981 | 7_2:-84803093 | None:intergenic |
| CATTCTAGGACTTACGTCAC+TGG | 0.528125 | 7_2:+84803929 | Msa1084430:CDS |
| TTGGTTATTGCTAAACCGGC+AGG | 0.529301 | 7_2:+84803346 | Msa1084430:CDS |
| CGTGATCAGATCCCTAGTAA+AGG | 0.536285 | 7_2:-84803414 | None:intergenic |
| TGATGTTGGAGCACAAGAGA+AGG | 0.538476 | 7_2:-84803471 | None:intergenic |
| TCACGCTGCCAAAGTTTGAC+AGG | 0.539518 | 7_2:+84803432 | Msa1084430:CDS |
| CCAAATGCTTCACTCAAACA+TGG | 0.541352 | 7_2:-84805221 | None:intergenic |
| GTCACTGGAATAATGAGAAA+CGG | 0.542182 | 7_2:+84803944 | Msa1084430:CDS |
| TAGATCTGACACTAATGGAA+TGG | 0.542919 | 7_2:+84803852 | Msa1084430:CDS |
| TCTGCTAAGCATTTGGGCGG+AGG | 0.544418 | 7_2:-84803722 | None:intergenic |
| CAACATTCTTCGCATGATGT+CGG | 0.545714 | 7_2:+84802471 | Msa1084430:exon |
| TTTGCTATACAAAAGATGGT+TGG | 0.546454 | 7_2:+84803327 | Msa1084430:CDS |
| CATCCAACTCTGGCAACTCA+AGG | 0.553068 | 7_2:-84803295 | None:intergenic |
| TTGAAATATTAAGAAATCAA+CGG | 0.556920 | 7_2:-84805548 | None:intergenic |
| TTTGGGAAATACATAAGCCA+AGG | 0.561817 | 7_2:-84803221 | None:intergenic |
| CATAGGAAGTTAATATGTGA+AGG | 0.564276 | 7_2:+84805349 | Msa1084430:three_prime_UTR |
| GACACTAATGGAATGGAAAG+AGG | 0.564517 | 7_2:+84803859 | Msa1084430:CDS |
| TGCTAAACCGGCAGGACTGG+CGG | 0.569550 | 7_2:+84803354 | Msa1084430:CDS |
| CAATAGAAGAGCTGCTGCTG+AGG | 0.574535 | 7_2:+84803037 | Msa1084430:CDS |
| ACACGACATCCATCCAACTC+TGG | 0.576746 | 7_2:-84803305 | None:intergenic |
| ATAACACATCCAGTTGATGT+TGG | 0.578438 | 7_2:-84803485 | None:intergenic |
| CTTGTCTCGGTTGGATGTTG+GGG | 0.581584 | 7_2:+84803124 | Msa1084430:CDS |
| CTCTAAACCTGTGACATCAA+AGG | 0.581595 | 7_2:-84805289 | None:intergenic |
| AGGAATGAATATCTGTGAGT+AGG | 0.583262 | 7_2:+84805369 | Msa1084430:three_prime_UTR |
| GTGATTCTTCATGCAAAATG+TGG | 0.585218 | 7_2:+84805265 | Msa1084430:three_prime_UTR |
| ATCCAACTCTGGCAACTCAA+GGG | 0.590798 | 7_2:-84803294 | None:intergenic |
| TAAACCGGCAGGACTGGCGG+AGG | 0.593956 | 7_2:+84803357 | Msa1084430:CDS |
| ACAGTCCAAGTACGTTCAAG+TGG | 0.603382 | 7_2:-84803689 | None:intergenic |
| CAATTTGGAGCTGCAAACAT+GGG | 0.606485 | 7_2:+84803070 | Msa1084430:CDS |
| GCTCACTGGGATGATATCTA+CGG | 0.610400 | 7_2:-84804027 | None:intergenic |
| GTCGACTACACGTAAAGAAG+TGG | 0.612484 | 7_2:-84803192 | None:intergenic |
| ACATTCTTCGCATGATGTCG+GGG | 0.620719 | 7_2:+84802473 | Msa1084430:exon |
| CAGTGAGCAGTGTCGTGACA+GGG | 0.621223 | 7_2:+84804042 | Msa1084430:CDS |
| AATAGGTCTTACGCTGCACA+GGG | 0.638547 | 7_2:-84803271 | None:intergenic |
| CTCTCTGCTAAGCATTTGGG+CGG | 0.648219 | 7_2:-84803725 | None:intergenic |
| TTTGTAGTTTATATATGTTG+TGG | 0.650518 | 7_2:+84803806 | Msa1084430:CDS |
| AGTTTATATATGTTGTGGTG+AGG | 0.651124 | 7_2:+84803811 | Msa1084430:CDS |
| AGAATCACAAAGAACTCGAG+AGG | 0.661545 | 7_2:-84805250 | None:intergenic |
| GAGCGACAGAGGTTGGCTAG+GGG | 0.671202 | 7_2:+84803658 | Msa1084430:CDS |
| CAGTCCAAGTACGTTCAAGT+GGG | 0.682692 | 7_2:-84803688 | None:intergenic |
| GACCACTGTTAATTATGACG+CGG | 0.704466 | 7_2:+84803577 | Msa1084430:CDS |
| TATAAGCACGTGTTATCCTG+GGG | 0.707016 | 7_2:+84803544 | Msa1084430:CDS |
| ACAATTCCAAGACTTCAGCA+GGG | 0.713188 | 7_2:-84803100 | None:intergenic |
| GTGTAGTCGACCAATCACCT+TGG | 0.718766 | 7_2:+84803204 | Msa1084430:CDS |
| TACCGCGTCATAATTAACAG+TGG | 0.732690 | 7_2:-84803579 | None:intergenic |
| AAATTTATGATAGAGCACAA+AGG | 0.741593 | 7_2:+84803776 | Msa1084430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTAAAAAAAAAAAATTAG+CGG | + | chr7_2:84804124-84804143 | Msa1084430:exon | 10.0% |
| !!! | TTATATCTTATTTTCAAATA+AGG | + | chr7_2:84805034-84805053 | Msa1084430:intron | 10.0% |
| !!! | ATATTTCAATTATATTTTTG+TGG | + | chr7_2:84805562-84805581 | Msa1084430:three_prime_UTR | 10.0% |
| !! | CAATAATAATAATATGTATG+GGG | - | chr7_2:84802556-84802575 | None:intergenic | 15.0% |
| !! | GCAATAATAATAATATGTAT+GGG | - | chr7_2:84802557-84802576 | None:intergenic | 15.0% |
| !! | AGCAATAATAATAATATGTA+TGG | - | chr7_2:84802558-84802577 | None:intergenic | 15.0% |
| !! | TACATATTATTATTATTGCT+AGG | + | chr7_2:84802558-84802577 | Msa1084430:intron | 15.0% |
| !! | ACATATTATTATTATTGCTA+GGG | + | chr7_2:84802559-84802578 | Msa1084430:intron | 15.0% |
| !!! | AATTTTGTTCAACAATTAAT+TGG | + | chr7_2:84802603-84802622 | Msa1084430:intron | 15.0% |
| !! | TTTAGATTGATAAACATATT+TGG | + | chr7_2:84802881-84802900 | Msa1084430:intron | 15.0% |
| !! | TTGAAATATTAAGAAATCAA+CGG | - | chr7_2:84805551-84805570 | None:intergenic | 15.0% |
| !!! | TCAATTTTTTGGCTTAATAA+TGG | + | chr7_2:84802637-84802656 | Msa1084430:intron | 20.0% |
| !! | TATGATTTCTATATCCAATT+CGG | + | chr7_2:84802696-84802715 | Msa1084430:intron | 20.0% |
| !! | GTTTCATCTATATTTCATAT+TGG | + | chr7_2:84802732-84802751 | Msa1084430:intron | 20.0% |
| !! | TTTGTAGTTTATATATGTTG+TGG | + | chr7_2:84803806-84803825 | Msa1084430:CDS | 20.0% |
| !! | GATCTAACTTGAAAATTATT+GGG | - | chr7_2:84803838-84803857 | None:intergenic | 20.0% |
| !! | AGATCTAACTTGAAAATTAT+TGG | - | chr7_2:84803839-84803858 | None:intergenic | 20.0% |
| !! | AGACTACATATTATAACTAT+TGG | + | chr7_2:84804208-84804227 | Msa1084430:intron | 20.0% |
| !!! | ATTTTTCATTTCCAAAACTA+AGG | - | chr7_2:84804551-84804570 | None:intergenic | 20.0% |
| !!! | TTAGTTTTGGAAATGAAAAA+TGG | + | chr7_2:84804550-84804569 | Msa1084430:intron | 20.0% |
| !!! | TTATTTTCAAATAAGGACTT+GGG | + | chr7_2:84805041-84805060 | Msa1084430:intron | 20.0% |
| !! | AGCTAAAATATTTATCTCTT+TGG | + | chr7_2:84805393-84805412 | Msa1084430:three_prime_UTR | 20.0% |
| ! | ATAATAATATGTATGGGGTT+AGG | - | chr7_2:84802551-84802570 | None:intergenic | 25.0% |
| !!! | TTGCACTAACTTCAATTTTT+TGG | + | chr7_2:84802626-84802645 | Msa1084430:intron | 25.0% |
| ! | CATGAAAAATTTAACCGAAT+TGG | - | chr7_2:84802713-84802732 | None:intergenic | 25.0% |
| ! | TAGTTAATTCACAATAAAGC+TGG | - | chr7_2:84802769-84802788 | None:intergenic | 25.0% |
| !!! | CATTTTTAAGTTGATGATTG+TGG | + | chr7_2:84802790-84802809 | Msa1084430:intron | 25.0% |
| ! | AGATTGATAAACATATTTGG+TGG | + | chr7_2:84802884-84802903 | Msa1084430:intron | 25.0% |
| ! | GATTGATAAACATATTTGGT+GGG | + | chr7_2:84802885-84802904 | Msa1084430:intron | 25.0% |
| ! | CTTATGTATTTCCCAAAAAA+GGG | + | chr7_2:84803227-84803246 | Msa1084430:CDS | 25.0% |
| !!! | CATAACAATTACCCTTTTTT+GGG | - | chr7_2:84803241-84803260 | None:intergenic | 25.0% |
| !!! | TCATAACAATTACCCTTTTT+TGG | - | chr7_2:84803242-84803261 | None:intergenic | 25.0% |
| !! | ATATTAATTTTCAGACGTGT+TGG | + | chr7_2:84803506-84803525 | Msa1084430:CDS | 25.0% |
| !! | ATAAGCTTGTCTTTTCTAAT+GGG | + | chr7_2:84803621-84803640 | Msa1084430:CDS | 25.0% |
| ! | AAATTTATGATAGAGCACAA+AGG | + | chr7_2:84803776-84803795 | Msa1084430:CDS | 25.0% |
| !!! | TTGTGTAGAGCATTTATTTT+TGG | + | chr7_2:84804173-84804192 | Msa1084430:intron | 25.0% |
| !! | TATTGGATACATGCTTTATT+AGG | + | chr7_2:84804225-84804244 | Msa1084430:intron | 25.0% |
| ! | TATTAGGCTGTAAACATTTA+TGG | + | chr7_2:84804241-84804260 | Msa1084430:intron | 25.0% |
| ! | CAATAAGACTAGGAAAATTT+AGG | - | chr7_2:84804320-84804339 | None:intergenic | 25.0% |
| ! | TGAGTTATATGCAAATCTTA+AGG | + | chr7_2:84804387-84804406 | Msa1084430:intron | 25.0% |
| !!! | CACTAGTTTGTTGTAAAAAT+TGG | + | chr7_2:84804666-84804685 | Msa1084430:intron | 25.0% |
| !! | TTTAACTTCAATCGAGATTA+TGG | - | chr7_2:84804733-84804752 | None:intergenic | 25.0% |
| !! | AGGGTATTCTATAAAATAAG+AGG | - | chr7_2:84804834-84804853 | None:intergenic | 25.0% |
| !!! | CTTATTTTCAAATAAGGACT+TGG | + | chr7_2:84805040-84805059 | Msa1084430:intron | 25.0% |
| ! | AGAAAAAGATATGATCAAAC+AGG | - | chr7_2:84805128-84805147 | None:intergenic | 25.0% |
| TTGTTGAACAAAATTGAGAG+TGG | - | chr7_2:84802598-84802617 | None:intergenic | 30.0% | |
| AAAAAATGAAGTTAGCTAGC+AGG | - | chr7_2:84802952-84802971 | None:intergenic | 30.0% | |
| TGAGGTAAAAAGCAACAATT+TGG | + | chr7_2:84803055-84803074 | Msa1084430:CDS | 30.0% | |
| GCTTATGTATTTCCCAAAAA+AGG | + | chr7_2:84803226-84803245 | Msa1084430:CDS | 30.0% | |
| ! | TTTGCTATACAAAAGATGGT+TGG | + | chr7_2:84803327-84803346 | Msa1084430:CDS | 30.0% |
| TCTCTTTAATCCCTTTACTA+GGG | + | chr7_2:84803403-84803422 | Msa1084430:CDS | 30.0% | |
| ! | GATAAGCTTGTCTTTTCTAA+TGG | + | chr7_2:84803620-84803639 | Msa1084430:CDS | 30.0% |
| AGTTTATATATGTTGTGGTG+AGG | + | chr7_2:84803811-84803830 | Msa1084430:CDS | 30.0% | |
| !!! | GTTTTTTGTCATCTCATTCT+AGG | + | chr7_2:84803915-84803934 | Msa1084430:CDS | 30.0% |
| !! | CAGAAGTTCTCAAAAGTATT+TGG | - | chr7_2:84804073-84804092 | None:intergenic | 30.0% |
| !! | CAAATACTTTTGAGAACTTC+TGG | + | chr7_2:84804071-84804090 | Msa1084430:CDS | 30.0% |
| TTGTAGCTAACAATAAGACT+AGG | - | chr7_2:84804330-84804349 | None:intergenic | 30.0% | |
| AAATCTTAAGGTTTCTCCAA+TGG | + | chr7_2:84804399-84804418 | Msa1084430:intron | 30.0% | |
| ! | ATGTTCATGATCCTTAGTTT+TGG | + | chr7_2:84804537-84804556 | Msa1084430:intron | 30.0% |
| ! | ATTTTATAGAATACCCTTGC+AGG | + | chr7_2:84804837-84804856 | Msa1084430:intron | 30.0% |
| GATAGTTTGGAAAACATAGT+CGG | + | chr7_2:84804891-84804910 | Msa1084430:intron | 30.0% | |
| ACTGGTATATGATTGCTAAA+TGG | + | chr7_2:84804943-84804962 | Msa1084430:intron | 30.0% | |
| ! | ATTTTGCCTGTTTGATCAAA+TGG | + | chr7_2:84804987-84805006 | Msa1084430:intron | 30.0% |
| GATTAGCAAAACCTATTTGA+AGG | + | chr7_2:84805321-84805340 | Msa1084430:three_prime_UTR | 30.0% | |
| CATAGGAAGTTAATATGTGA+AGG | + | chr7_2:84805349-84805368 | Msa1084430:three_prime_UTR | 30.0% | |
| GGAGAAAAATCTTGAAATTC+AGG | - | chr7_2:84805438-84805457 | None:intergenic | 30.0% | |
| ATATGTATGGGGTTAGGTTA+GGG | - | chr7_2:84802545-84802564 | None:intergenic | 35.0% | |
| AATATGTATGGGGTTAGGTT+AGG | - | chr7_2:84802546-84802565 | None:intergenic | 35.0% | |
| ATTCACAATAAAGCTGGTCA+TGG | - | chr7_2:84802763-84802782 | None:intergenic | 35.0% | |
| AGTAAACAGAACAGAAACAG+CGG | - | chr7_2:84802847-84802866 | None:intergenic | 35.0% | |
| ! | GATAAACATATTTGGTGGGA+TGG | + | chr7_2:84802889-84802908 | Msa1084430:intron | 35.0% |
| TCTTGGAATTGTTCTTGTCT+CGG | + | chr7_2:84803111-84803130 | Msa1084430:CDS | 35.0% | |
| AATACATAAGCCAAGGTGAT+TGG | - | chr7_2:84803217-84803236 | None:intergenic | 35.0% | |
| TTTGGGAAATACATAAGCCA+AGG | - | chr7_2:84803224-84803243 | None:intergenic | 35.0% | |
| !! | CGTGTTTGCTATACAAAAGA+TGG | + | chr7_2:84803323-84803342 | Msa1084430:CDS | 35.0% |
| ! | ATGGTTGGTTATTGCTAAAC+CGG | + | chr7_2:84803342-84803361 | Msa1084430:CDS | 35.0% |
| CTCTCTTTAATCCCTTTACT+AGG | + | chr7_2:84803402-84803421 | Msa1084430:CDS | 35.0% | |
| TGATATGTCCTGTCAAACTT+TGG | - | chr7_2:84803443-84803462 | None:intergenic | 35.0% | |
| ! | ATAACACATCCAGTTGATGT+TGG | - | chr7_2:84803488-84803507 | None:intergenic | 35.0% |
| CAAGTTAGATCTGACACTAA+TGG | + | chr7_2:84803847-84803866 | Msa1084430:CDS | 35.0% | |
| TAGATCTGACACTAATGGAA+TGG | + | chr7_2:84803852-84803871 | Msa1084430:CDS | 35.0% | |
| GTCACTGGAATAATGAGAAA+CGG | + | chr7_2:84803944-84803963 | Msa1084430:CDS | 35.0% | |
| ! | TTCCATAGAAACGGACTTTA+GGG | - | chr7_2:84803979-84803998 | None:intergenic | 35.0% |
| ! | TTTCCATAGAAACGGACTTT+AGG | - | chr7_2:84803980-84803999 | None:intergenic | 35.0% |
| ! | TGCAACGTTTTCCATAGAAA+CGG | - | chr7_2:84803988-84804007 | None:intergenic | 35.0% |
| GAACCACCAAAAGACTTTAT+TGG | + | chr7_2:84804097-84804116 | Msa1084430:CDS | 35.0% | |
| ! | ATCCAGCCAATAAAGTCTTT+TGG | - | chr7_2:84804106-84804125 | None:intergenic | 35.0% |
| GTAAACATTTATGGAGCTAC+TGG | + | chr7_2:84804250-84804269 | Msa1084430:intron | 35.0% | |
| GAATAAGATTGCATGCATCA+TGG | - | chr7_2:84804363-84804382 | None:intergenic | 35.0% | |
| ACTAATGCACATGTAACCAT+TGG | - | chr7_2:84804418-84804437 | None:intergenic | 35.0% | |
| ! | GACAGAGTACAATTTTGCTA+TGG | + | chr7_2:84804486-84804505 | Msa1084430:intron | 35.0% |
| TGAAAAATGGTCAGAGTTAG+AGG | + | chr7_2:84804563-84804582 | Msa1084430:intron | 35.0% | |
| ACACACATGACTTTCTATGA+TGG | - | chr7_2:84804700-84804719 | None:intergenic | 35.0% | |
| ! | CTATGTTTTCCAAACTATCG+AGG | - | chr7_2:84804890-84804909 | None:intergenic | 35.0% |
| ATCCAACCATTTGATCAAAC+AGG | - | chr7_2:84804996-84805015 | None:intergenic | 35.0% | |
| GTGATTCTTCATGCAAAATG+TGG | + | chr7_2:84805265-84805284 | Msa1084430:three_prime_UTR | 35.0% | |
| CCTATGTACAACCTTCAAAT+AGG | - | chr7_2:84805335-84805354 | None:intergenic | 35.0% | |
| CCTATTTGAAGGTTGTACAT+AGG | + | chr7_2:84805332-84805351 | Msa1084430:three_prime_UTR | 35.0% | |
| AGGAATGAATATCTGTGAGT+AGG | + | chr7_2:84805369-84805388 | Msa1084430:three_prime_UTR | 35.0% | |
| CAACATTCTTCGCATGATGT+CGG | + | chr7_2:84802471-84802490 | Msa1084430:exon | 40.0% | |
| AACATTCTTCGCATGATGTC+GGG | + | chr7_2:84802472-84802491 | Msa1084430:exon | 40.0% | |
| GTAAACAGAACAGAAACAGC+GGG | - | chr7_2:84802846-84802865 | None:intergenic | 40.0% | |
| ! | ACAATTTGGAGCTGCAAACA+TGG | + | chr7_2:84803069-84803088 | Msa1084430:CDS | 40.0% |
| ! | CAATTTGGAGCTGCAAACAT+GGG | + | chr7_2:84803070-84803089 | Msa1084430:CDS | 40.0% |
| ACAATTCCAAGACTTCAGCA+GGG | - | chr7_2:84803103-84803122 | None:intergenic | 40.0% | |
| AACAATTCCAAGACTTCAGC+AGG | - | chr7_2:84803104-84803123 | None:intergenic | 40.0% | |
| GTGATCAGATCCCTAGTAAA+GGG | - | chr7_2:84803416-84803435 | None:intergenic | 40.0% | |
| CTATAAGCACGTGTTATCCT+GGG | + | chr7_2:84803543-84803562 | Msa1084430:CDS | 40.0% | |
| TATAAGCACGTGTTATCCTG+GGG | + | chr7_2:84803544-84803563 | Msa1084430:CDS | 40.0% | |
| GTTATCCTGGGGAAAAAGAA+TGG | + | chr7_2:84803555-84803574 | Msa1084430:CDS | 40.0% | |
| GACCACTGTTAATTATGACG+CGG | + | chr7_2:84803577-84803596 | Msa1084430:CDS | 40.0% | |
| TACCGCGTCATAATTAACAG+TGG | - | chr7_2:84803582-84803601 | None:intergenic | 40.0% | |
| ! | TTTTATTGTCTGAGCGACAG+AGG | + | chr7_2:84803647-84803666 | Msa1084430:CDS | 40.0% |
| GAACTCTCTGCTAAGCATTT+GGG | - | chr7_2:84803731-84803750 | None:intergenic | 40.0% | |
| AGAACTCTCTGCTAAGCATT+TGG | - | chr7_2:84803732-84803751 | None:intergenic | 40.0% | |
| AGAGTTCTACTGCCAAAAAC+TGG | + | chr7_2:84803744-84803763 | Msa1084430:CDS | 40.0% | |
| GACACTAATGGAATGGAAAG+AGG | + | chr7_2:84803859-84803878 | Msa1084430:CDS | 40.0% | |
| AAAGAGGTGAGAACACTAGA+TGG | + | chr7_2:84803875-84803894 | Msa1084430:CDS | 40.0% | |
| TTCCCTAAAGTCCGTTTCTA+TGG | + | chr7_2:84803974-84803993 | Msa1084430:CDS | 40.0% | |
| ! | CAGCCAATAAAGTCTTTTGG+TGG | - | chr7_2:84804103-84804122 | None:intergenic | 40.0% |
| CACCAAAAGACTTTATTGGC+TGG | + | chr7_2:84804101-84804120 | Msa1084430:CDS | 40.0% | |
| AGTAGCATCTCCAATGTTGT+TGG | + | chr7_2:84804435-84804454 | Msa1084430:intron | 40.0% | |
| GTACTCAGTACCAACAACAT+TGG | - | chr7_2:84804448-84804467 | None:intergenic | 40.0% | |
| ! | GTTTTCCAAACTATCGAGGA+TGG | - | chr7_2:84804886-84804905 | None:intergenic | 40.0% |
| TTCTTTAGTCTGTGCTGAAC+TGG | + | chr7_2:84804925-84804944 | Msa1084430:intron | 40.0% | |
| TGCCTGTTTGATCAAATGGT+TGG | + | chr7_2:84804991-84805010 | Msa1084430:intron | 40.0% | |
| CCAAATGCTTCACTCAAACA+TGG | - | chr7_2:84805224-84805243 | None:intergenic | 40.0% | |
| ! | CCATGTTTGAGTGAAGCATT+TGG | + | chr7_2:84805221-84805240 | Msa1084430:three_prime_UTR | 40.0% |
| AGAATCACAAAGAACTCGAG+AGG | - | chr7_2:84805253-84805272 | None:intergenic | 40.0% | |
| CTCTAAACCTGTGACATCAA+AGG | - | chr7_2:84805292-84805311 | None:intergenic | 40.0% | |
| ! | TTTCTCCTGCAATGCTTTTG+TGG | + | chr7_2:84805451-84805470 | Msa1084430:three_prime_UTR | 40.0% |
| !! | ATGTTCCACAAAAGCATTGC+AGG | - | chr7_2:84805459-84805478 | None:intergenic | 40.0% |
| ACATTCTTCGCATGATGTCG+GGG | + | chr7_2:84802473-84802492 | Msa1084430:exon | 45.0% | |
| GGAATTGTTCTTGTCTCGGT+TGG | + | chr7_2:84803115-84803134 | Msa1084430:CDS | 45.0% | |
| TTCTTGTCTCGGTTGGATGT+TGG | + | chr7_2:84803122-84803141 | Msa1084430:CDS | 45.0% | |
| TCTTGTCTCGGTTGGATGTT+GGG | + | chr7_2:84803123-84803142 | Msa1084430:CDS | 45.0% | |
| CTTCAGCTGTTTGCAAGAGA+TGG | + | chr7_2:84803159-84803178 | Msa1084430:CDS | 45.0% | |
| GTCGACTACACGTAAAGAAG+TGG | - | chr7_2:84803195-84803214 | None:intergenic | 45.0% | |
| AATAGGTCTTACGCTGCACA+GGG | - | chr7_2:84803274-84803293 | None:intergenic | 45.0% | |
| ATCCAACTCTGGCAACTCAA+GGG | - | chr7_2:84803297-84803316 | None:intergenic | 45.0% | |
| TTGGTTATTGCTAAACCGGC+AGG | + | chr7_2:84803346-84803365 | Msa1084430:CDS | 45.0% | |
| CGTGATCAGATCCCTAGTAA+AGG | - | chr7_2:84803417-84803436 | None:intergenic | 45.0% | |
| TGATGTTGGAGCACAAGAGA+AGG | - | chr7_2:84803474-84803493 | None:intergenic | 45.0% | |
| TCTTGTGCTCCAACATCAAC+TGG | + | chr7_2:84803476-84803495 | Msa1084430:CDS | 45.0% | |
| GCTATAAGCACGTGTTATCC+TGG | + | chr7_2:84803542-84803561 | Msa1084430:CDS | 45.0% | |
| TTGACCCACTTGAACGTACT+TGG | + | chr7_2:84803684-84803703 | Msa1084430:CDS | 45.0% | |
| CAGTCCAAGTACGTTCAAGT+GGG | - | chr7_2:84803691-84803710 | None:intergenic | 45.0% | |
| ACAGTCCAAGTACGTTCAAG+TGG | - | chr7_2:84803692-84803711 | None:intergenic | 45.0% | |
| TACTGCCAAAAACTGGTCGA+AGG | + | chr7_2:84803751-84803770 | Msa1084430:CDS | 45.0% | |
| ACTGCCAAAAACTGGTCGAA+GGG | + | chr7_2:84803752-84803771 | Msa1084430:CDS | 45.0% | |
| ! | TTTCCCCTTCGACCAGTTTT+TGG | - | chr7_2:84803759-84803778 | None:intergenic | 45.0% |
| !! | CATTCTAGGACTTACGTCAC+TGG | + | chr7_2:84803929-84803948 | Msa1084430:CDS | 45.0% |
| GCTCACTGGGATGATATCTA+CGG | - | chr7_2:84804030-84804049 | None:intergenic | 45.0% | |
| ! | GTTTTCATCAACGCCTGCAA+GGG | - | chr7_2:84804853-84804872 | None:intergenic | 45.0% |
| TTCCAAACTATCGAGGATGG+AGG | - | chr7_2:84804883-84804902 | None:intergenic | 45.0% | |
| ATGTGGTCCTTTGATGTCAC+AGG | + | chr7_2:84805282-84805301 | Msa1084430:three_prime_UTR | 45.0% | |
| !!! | TAATATTTTTTATAAAAAGT+TGG | + | chr7_2:84804771-84804790 | Msa1084430:intron | 5.0% |
| !!! | AATATTTTTTATAAAAAGTT+GGG | + | chr7_2:84804772-84804791 | Msa1084430:intron | 5.0% |
| TTCGCATGATGTCGGGGAAA+AGG | + | chr7_2:84802479-84802498 | Msa1084430:exon | 50.0% | |
| CAATAGAAGAGCTGCTGCTG+AGG | + | chr7_2:84803037-84803056 | Msa1084430:CDS | 50.0% | |
| CAAGACTTCAGCAGGGAGAT+CGG | - | chr7_2:84803096-84803115 | None:intergenic | 50.0% | |
| CTTGTCTCGGTTGGATGTTG+GGG | + | chr7_2:84803124-84803143 | Msa1084430:CDS | 50.0% | |
| GTGTAGTCGACCAATCACCT+TGG | + | chr7_2:84803204-84803223 | Msa1084430:CDS | 50.0% | |
| GAATAGGTCTTACGCTGCAC+AGG | - | chr7_2:84803275-84803294 | None:intergenic | 50.0% | |
| CTCTGGCAACTCAAGGGAAT+AGG | - | chr7_2:84803291-84803310 | None:intergenic | 50.0% | |
| ! | TTCCCTTGAGTTGCCAGAGT+TGG | + | chr7_2:84803292-84803311 | Msa1084430:CDS | 50.0% |
| CATCCAACTCTGGCAACTCA+AGG | - | chr7_2:84803298-84803317 | None:intergenic | 50.0% | |
| ! | CTTGAGTTGCCAGAGTTGGA+TGG | + | chr7_2:84803296-84803315 | Msa1084430:CDS | 50.0% |
| ACACGACATCCATCCAACTC+TGG | - | chr7_2:84803308-84803327 | None:intergenic | 50.0% | |
| TATTGCTAAACCGGCAGGAC+TGG | + | chr7_2:84803351-84803370 | Msa1084430:CDS | 50.0% | |
| TCACGCTGCCAAAGTTTGAC+AGG | + | chr7_2:84803432-84803451 | Msa1084430:CDS | 50.0% | |
| ! | GTGGTCCATTCTTTTTCCCC+AGG | - | chr7_2:84803563-84803582 | None:intergenic | 50.0% |
| ATTGTCTGAGCGACAGAGGT+TGG | + | chr7_2:84803651-84803670 | Msa1084430:CDS | 50.0% | |
| CTCTCTGCTAAGCATTTGGG+CGG | - | chr7_2:84803728-84803747 | None:intergenic | 50.0% | |
| CTGCCAAAAACTGGTCGAAG+GGG | + | chr7_2:84803753-84803772 | Msa1084430:CDS | 50.0% | |
| ! | GGTTTTCATCAACGCCTGCA+AGG | - | chr7_2:84804854-84804873 | None:intergenic | 50.0% |
| ! | TATCGAGGATGGAGGTGTGT+GGG | - | chr7_2:84804875-84804894 | None:intergenic | 50.0% |
| CACCTCCATCCTCGATAGTT+TGG | + | chr7_2:84804878-84804897 | Msa1084430:intron | 50.0% | |
| TAGTTCCTGCACGACAAGCA+GGG | - | chr7_2:84805173-84805192 | None:intergenic | 50.0% | |
| CGATCTCCCTGCTGAAGTCT+TGG | + | chr7_2:84803094-84803113 | Msa1084430:CDS | 55.0% | |
| ! | TGAGCGACAGAGGTTGGCTA+GGG | + | chr7_2:84803657-84803676 | Msa1084430:CDS | 55.0% |
| TCTGCTAAGCATTTGGGCGG+AGG | - | chr7_2:84803725-84803744 | None:intergenic | 55.0% | |
| CTGTCACGACACTGCTCACT+GGG | - | chr7_2:84804043-84804062 | None:intergenic | 55.0% | |
| CAGTGAGCAGTGTCGTGACA+GGG | + | chr7_2:84804042-84804061 | Msa1084430:CDS | 55.0% | |
| ! | CTATCGAGGATGGAGGTGTG+TGG | - | chr7_2:84804876-84804895 | None:intergenic | 55.0% |
| CTAGTTCCTGCACGACAAGC+AGG | - | chr7_2:84805174-84805193 | None:intergenic | 55.0% | |
| CTGCTTGTCGTGCAGGAACT+AGG | + | chr7_2:84805172-84805191 | Msa1084430:intron | 55.0% | |
| TGCTAAACCGGCAGGACTGG+CGG | + | chr7_2:84803354-84803373 | Msa1084430:CDS | 60.0% | |
| ! | CTGAGCGACAGAGGTTGGCT+AGG | + | chr7_2:84803656-84803675 | Msa1084430:CDS | 60.0% |
| ! | GAGCGACAGAGGTTGGCTAG+GGG | + | chr7_2:84803658-84803677 | Msa1084430:CDS | 60.0% |
| CCTGTCACGACACTGCTCAC+TGG | - | chr7_2:84804044-84804063 | None:intergenic | 60.0% | |
| CCAGTGAGCAGTGTCGTGAC+AGG | + | chr7_2:84804041-84804060 | Msa1084430:CDS | 60.0% | |
| GACTTCCCTGCTTGTCGTGC+AGG | + | chr7_2:84805165-84805184 | Msa1084430:intron | 60.0% | |
| ! | TAAACCGGCAGGACTGGCGG+AGG | + | chr7_2:84803357-84803376 | Msa1084430:CDS | 65.0% |
| ! | CAGGACTGGCGGAGGTTGGA+CGG | + | chr7_2:84803365-84803384 | Msa1084430:CDS | 65.0% |
| CCAACCTCCGCCAGTCCTGC+CGG | - | chr7_2:84803364-84803383 | None:intergenic | 70.0% | |
| ! | CCGGCAGGACTGGCGGAGGT+TGG | + | chr7_2:84803361-84803380 | Msa1084430:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 84802451 | 84805586 | 84802451 | ID=Msa1084430;Name=Msa1084430 |
| chr7_2 | mRNA | 84802451 | 84805586 | 84802451 | ID=Msa1084430-mRNA-1;Parent=Msa1084430;Name=Msa1084430-mRNA-1;_AED=0.30;_eAED=0.30;_QI=33|1|1|1|0.5|0.33|3|422|379 |
| chr7_2 | exon | 84802451 | 84802521 | 84802451 | ID=Msa1084430-mRNA-1:exon:22795;Parent=Msa1084430-mRNA-1 |
| chr7_2 | exon | 84803028 | 84804151 | 84803028 | ID=Msa1084430-mRNA-1:exon:22796;Parent=Msa1084430-mRNA-1 |
| chr7_2 | exon | 84805187 | 84805586 | 84805187 | ID=Msa1084430-mRNA-1:exon:22797;Parent=Msa1084430-mRNA-1 |
| chr7_2 | five_prime_UTR | 84802451 | 84802483 | 84802451 | ID=Msa1084430-mRNA-1:five_prime_utr;Parent=Msa1084430-mRNA-1 |
| chr7_2 | CDS | 84802484 | 84802521 | 84802484 | ID=Msa1084430-mRNA-1:cds;Parent=Msa1084430-mRNA-1 |
| chr7_2 | CDS | 84803028 | 84804129 | 84803028 | ID=Msa1084430-mRNA-1:cds;Parent=Msa1084430-mRNA-1 |
| chr7_2 | three_prime_UTR | 84804130 | 84804151 | 84804130 | ID=Msa1084430-mRNA-1:three_prime_utr;Parent=Msa1084430-mRNA-1 |
| chr7_2 | three_prime_UTR | 84805187 | 84805586 | 84805187 | ID=Msa1084430-mRNA-1:three_prime_utr;Parent=Msa1084430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
