Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134850 | XP_013447461.1 | 77.095 | 179 | 25 | 2 | 215 | 390 | 117 | 282 | 1.26e-80 | 261 |
| Msa1134850 | XP_013447461.1 | 94.737 | 152 | 7 | 1 | 1 | 152 | 1 | 151 | 4.99e-99 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134850 | sp|Q9C942|CSE_ARATH | 33.974 | 156 | 96 | 3 | 237 | 388 | 125 | 277 | 1.54e-19 | 92.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134850 | A0A6A5M7S3 | 56.977 | 430 | 98 | 8 | 8 | 390 | 43 | 432 | 8.50e-151 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050720 | Msa1134850 | 0.806194 | 9.258967e-50 | -8.615850e-47 |
| Msa0094100 | Msa1134850 | 0.809076 | 2.262447e-50 | -8.615850e-47 |
| Msa0618010 | Msa1134850 | 0.806480 | 8.060487e-50 | -8.615850e-47 |
| Msa0647450 | Msa1134850 | -0.808770 | 2.631125e-50 | -8.615850e-47 |
| Msa0669850 | Msa1134850 | 0.814835 | 1.258225e-51 | -8.615850e-47 |
| Msa0734660 | Msa1134850 | 0.820481 | 6.704586e-53 | -8.615850e-47 |
| Msa0775260 | Msa1134850 | 0.805798 | 1.121547e-49 | -8.615850e-47 |
| Msa0776220 | Msa1134850 | 0.822214 | 2.669962e-53 | -8.615850e-47 |
| Msa0813670 | Msa1134850 | 0.808386 | 3.176702e-50 | -8.615850e-47 |
| Msa0824680 | Msa1134850 | 0.803888 | 2.811075e-49 | -8.615850e-47 |
| Msa0143080 | Msa1134850 | 0.803855 | 2.856086e-49 | -8.615850e-47 |
| Msa0183620 | Msa1134850 | 0.802809 | 4.704047e-49 | -8.615850e-47 |
| Msa0193760 | Msa1134850 | 0.801273 | 9.733146e-49 | -8.615850e-47 |
| Msa0194970 | Msa1134850 | 0.803104 | 4.087248e-49 | -8.615850e-47 |
| Msa0208630 | Msa1134850 | 0.815473 | 9.082388e-52 | -8.615850e-47 |
| Msa0369570 | Msa1134850 | 0.802290 | 6.018181e-49 | -8.615850e-47 |
| Msa0378080 | Msa1134850 | 0.800967 | 1.124188e-48 | -8.615850e-47 |
| Msa0392070 | Msa1134850 | 0.803500 | 3.384807e-49 | -8.615850e-47 |
| Msa0439140 | Msa1134850 | 0.909577 | 4.881174e-82 | -8.615850e-47 |
| Msa0470180 | Msa1134850 | 0.803816 | 2.910275e-49 | -8.615850e-47 |
| Msa1026760 | Msa1134850 | 0.848308 | 6.658775e-60 | -8.615850e-47 |
| Msa1026790 | Msa1134850 | 0.847783 | 9.292721e-60 | -8.615850e-47 |
| Msa1095480 | Msa1134850 | 0.815256 | 1.014593e-51 | -8.615850e-47 |
| Msa0265820 | Msa1134850 | 0.809801 | 1.581427e-50 | -8.615850e-47 |
| Msa0274520 | Msa1134850 | 0.813156 | 2.951259e-51 | -8.615850e-47 |
| Msa0301980 | Msa1134850 | 0.803755 | 2.996593e-49 | -8.615850e-47 |
| Msa0326670 | Msa1134850 | 0.807084 | 6.008478e-50 | -8.615850e-47 |
| Msa0347360 | Msa1134850 | 0.800495 | 1.403023e-48 | -8.615850e-47 |
| Msa0358170 | Msa1134850 | 0.804080 | 2.565008e-49 | -8.615850e-47 |
| Msa1134850 | Msa1142500 | 0.804592 | 2.006589e-49 | -8.615850e-47 |
| Msa1134850 | Msa1154160 | 0.830349 | 3.087679e-55 | -8.615850e-47 |
| Msa1134850 | Msa1206020 | 0.806008 | 1.013392e-49 | -8.615850e-47 |
| Msa1134850 | Msa1280130 | 0.804397 | 2.202718e-49 | -8.615850e-47 |
| Msa1134850 | Msa1348950 | 0.808718 | 2.698214e-50 | -8.615850e-47 |
| Msa1134850 | Msa1440610 | 0.807710 | 4.425962e-50 | -8.615850e-47 |
| Msa1134850 | Msa1441190 | 0.807205 | 5.662755e-50 | -8.615850e-47 |
| Msa0518040 | Msa1134850 | 0.811259 | 7.656169e-51 | -8.615850e-47 |
| Msa0553220 | Msa1134850 | -0.806244 | 9.036960e-50 | -8.615850e-47 |
| Msa0564930 | Msa1134850 | 0.803173 | 3.955053e-49 | -8.615850e-47 |
| Msa0590660 | Msa1134850 | 0.804672 | 1.930146e-49 | -8.615850e-47 |
| Msa0853170 | Msa1134850 | 0.806134 | 9.532984e-50 | -8.615850e-47 |
| Msa0855310 | Msa1134850 | 0.803699 | 3.076834e-49 | -8.615850e-47 |
| Msa0937240 | Msa1134850 | 0.805761 | 1.142091e-49 | -8.615850e-47 |
| Msa0974530 | Msa1134850 | 0.809470 | 1.862451e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134850 | MtrunA17_Chr7g0215451 | 95.946 | 148 | 5 | 1 | 1 | 148 | 1 | 147 | 1.33e-101 | 305 |
| Msa1134850 | MtrunA17_Chr7g0215451 | 84.270 | 178 | 26 | 1 | 215 | 390 | 117 | 294 | 6.20e-100 | 300 |
| Msa1134850 | MtrunA17_Chr6g0457581 | 82.759 | 145 | 24 | 1 | 4 | 148 | 3 | 146 | 1.85e-81 | 253 |
| Msa1134850 | MtrunA17_Chr6g0457581 | 60.674 | 178 | 68 | 1 | 215 | 390 | 116 | 293 | 2.55e-70 | 224 |
| Msa1134850 | MtrunA17_Chr6g0460121 | 61.236 | 178 | 67 | 1 | 215 | 390 | 79 | 256 | 2.62e-71 | 226 |
| Msa1134850 | MtrunA17_Chr6g0460121 | 81.720 | 93 | 16 | 1 | 56 | 148 | 18 | 109 | 1.10e-47 | 164 |
| Msa1134850 | MtrunA17_Chr6g0484431 | 64.789 | 142 | 49 | 1 | 7 | 148 | 10 | 150 | 6.51e-61 | 198 |
| Msa1134850 | MtrunA17_Chr6g0484431 | 54.321 | 162 | 71 | 2 | 215 | 373 | 120 | 281 | 3.54e-54 | 181 |
| Msa1134850 | MtrunA17_Chr1g0209741 | 60.839 | 143 | 56 | 0 | 7 | 149 | 45 | 187 | 4.35e-58 | 194 |
| Msa1134850 | MtrunA17_Chr1g0209741 | 48.295 | 176 | 89 | 1 | 215 | 388 | 156 | 331 | 4.54e-51 | 175 |
| Msa1134850 | MtrunA17_Chr5g0423541 | 60.140 | 143 | 57 | 0 | 7 | 149 | 59 | 201 | 4.34e-56 | 189 |
| Msa1134850 | MtrunA17_Chr5g0423541 | 58.042 | 143 | 60 | 0 | 246 | 388 | 203 | 345 | 3.53e-52 | 179 |
| Msa1134850 | MtrunA17_Chr1g0195501 | 46.452 | 155 | 83 | 0 | 236 | 390 | 93 | 247 | 4.37e-44 | 155 |
| Msa1134850 | MtrunA17_Chr1g0195501 | 46.392 | 97 | 51 | 1 | 55 | 151 | 8 | 103 | 5.56e-21 | 92.8 |
| Msa1134850 | MtrunA17_Chr7g0269371 | 47.403 | 154 | 81 | 0 | 237 | 390 | 93 | 246 | 3.91e-43 | 153 |
| Msa1134850 | MtrunA17_Chr7g0269371 | 40.000 | 100 | 58 | 1 | 52 | 151 | 5 | 102 | 5.86e-20 | 90.1 |
| Msa1134850 | MtrunA17_Chr1g0212901 | 47.368 | 152 | 80 | 0 | 239 | 390 | 98 | 249 | 5.87e-40 | 144 |
| Msa1134850 | MtrunA17_Chr1g0212901 | 37.864 | 103 | 62 | 2 | 52 | 154 | 7 | 107 | 1.85e-17 | 82.4 |
| Msa1134850 | MtrunA17_Chr4g0047891 | 44.079 | 152 | 85 | 0 | 237 | 388 | 126 | 277 | 4.32e-38 | 139 |
| Msa1134850 | MtrunA17_Chr4g0047891 | 30.928 | 97 | 67 | 0 | 52 | 148 | 36 | 132 | 3.08e-13 | 70.1 |
| Msa1134850 | MtrunA17_Chr1g0199771 | 38.129 | 139 | 84 | 2 | 249 | 385 | 129 | 267 | 1.34e-24 | 102 |
| Msa1134850 | MtrunA17_Chr4g0071671 | 37.179 | 156 | 91 | 3 | 237 | 388 | 116 | 268 | 1.15e-23 | 100 |
| Msa1134850 | MtrunA17_Chr6g0460131 | 80.851 | 47 | 9 | 0 | 4 | 50 | 3 | 49 | 1.93e-18 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134850 | AT5G16120.3 | 76.027 | 146 | 35 | 0 | 245 | 390 | 150 | 295 | 3.04e-75 | 238 |
| Msa1134850 | AT5G16120.3 | 68.085 | 141 | 44 | 1 | 9 | 149 | 10 | 149 | 1.81e-63 | 207 |
| Msa1134850 | AT5G16120.1 | 76.027 | 146 | 35 | 0 | 245 | 390 | 150 | 295 | 3.04e-75 | 238 |
| Msa1134850 | AT5G16120.1 | 68.085 | 141 | 44 | 1 | 9 | 149 | 10 | 149 | 1.81e-63 | 207 |
| Msa1134850 | AT5G16120.2 | 76.027 | 146 | 35 | 0 | 245 | 390 | 168 | 313 | 4.51e-75 | 238 |
| Msa1134850 | AT5G16120.2 | 68.085 | 141 | 44 | 1 | 9 | 149 | 28 | 167 | 2.43e-63 | 207 |
| Msa1134850 | AT5G16120.4 | 77.083 | 144 | 33 | 0 | 245 | 388 | 182 | 325 | 5.74e-75 | 238 |
| Msa1134850 | AT5G16120.4 | 68.085 | 141 | 44 | 1 | 9 | 149 | 42 | 181 | 2.68e-63 | 207 |
| Msa1134850 | AT1G77420.1 | 52.841 | 176 | 81 | 1 | 215 | 388 | 157 | 332 | 7.53e-56 | 188 |
| Msa1134850 | AT1G77420.1 | 55.333 | 150 | 65 | 1 | 2 | 149 | 39 | 188 | 1.30e-50 | 174 |
| Msa1134850 | AT3G62860.2 | 47.403 | 154 | 81 | 0 | 238 | 391 | 52 | 205 | 1.60e-45 | 159 |
| Msa1134850 | AT3G62860.1 | 47.403 | 154 | 81 | 0 | 238 | 391 | 95 | 248 | 4.36e-45 | 159 |
| Msa1134850 | AT3G62860.1 | 38.983 | 118 | 66 | 2 | 52 | 169 | 6 | 117 | 7.16e-20 | 90.5 |
| Msa1134850 | AT2G47630.2 | 46.753 | 154 | 82 | 0 | 237 | 390 | 51 | 204 | 6.82e-44 | 155 |
| Msa1134850 | AT2G47630.3 | 46.753 | 154 | 82 | 0 | 237 | 390 | 71 | 224 | 1.16e-43 | 154 |
| Msa1134850 | AT2G47630.1 | 47.059 | 153 | 81 | 0 | 238 | 390 | 97 | 249 | 1.34e-43 | 155 |
| Msa1134850 | AT2G47630.1 | 45.745 | 94 | 51 | 0 | 56 | 149 | 10 | 103 | 5.71e-20 | 90.5 |
| Msa1134850 | AT1G11090.1 | 46.053 | 152 | 82 | 0 | 237 | 388 | 117 | 268 | 6.71e-42 | 150 |
| Msa1134850 | AT1G11090.1 | 34.694 | 98 | 64 | 0 | 51 | 148 | 26 | 123 | 2.89e-14 | 73.6 |
| Msa1134850 | AT2G39420.1 | 50.370 | 135 | 67 | 0 | 254 | 388 | 114 | 248 | 8.11e-40 | 144 |
| Msa1134850 | AT2G39420.1 | 40.594 | 101 | 59 | 1 | 47 | 147 | 3 | 102 | 7.37e-20 | 89.7 |
| Msa1134850 | AT2G39410.2 | 46.667 | 135 | 72 | 0 | 254 | 388 | 114 | 248 | 1.39e-36 | 135 |
| Msa1134850 | AT2G39410.2 | 44.000 | 100 | 55 | 1 | 48 | 147 | 4 | 102 | 3.49e-21 | 93.6 |
| Msa1134850 | AT3G55180.1 | 44.444 | 135 | 75 | 0 | 254 | 388 | 109 | 243 | 5.12e-34 | 129 |
| Msa1134850 | AT3G55180.1 | 45.361 | 97 | 53 | 0 | 55 | 151 | 5 | 101 | 3.02e-20 | 90.9 |
| Msa1134850 | AT2G39400.1 | 45.255 | 137 | 75 | 0 | 254 | 390 | 108 | 244 | 6.68e-34 | 128 |
| Msa1134850 | AT2G39400.1 | 46.237 | 93 | 49 | 1 | 55 | 147 | 5 | 96 | 2.51e-19 | 88.2 |
| Msa1134850 | AT5G19290.1 | 37.162 | 148 | 92 | 1 | 237 | 383 | 119 | 266 | 6.12e-29 | 115 |
| Msa1134850 | AT5G14980.1 | 37.333 | 150 | 93 | 1 | 237 | 385 | 118 | 267 | 6.48e-29 | 115 |
| Msa1134850 | AT3G55190.1 | 40.441 | 136 | 80 | 1 | 254 | 388 | 114 | 249 | 1.79e-28 | 114 |
| Msa1134850 | AT3G55190.1 | 40.000 | 95 | 56 | 1 | 56 | 150 | 12 | 105 | 9.16e-17 | 80.9 |
| Msa1134850 | AT2G39400.2 | 42.149 | 121 | 70 | 0 | 254 | 374 | 108 | 228 | 4.75e-24 | 100 |
| Msa1134850 | AT2G39400.2 | 46.237 | 93 | 49 | 1 | 55 | 147 | 5 | 96 | 1.57e-19 | 87.4 |
| Msa1134850 | AT2G39410.1 | 44.000 | 100 | 55 | 1 | 48 | 147 | 4 | 102 | 5.58e-23 | 93.6 |
| Msa1134850 | AT1G52760.1 | 33.974 | 156 | 96 | 3 | 237 | 388 | 125 | 277 | 1.57e-20 | 92.0 |
Find 110 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTGACCACATACTCTTTA+AGG | 0.123246 | 7_4:+1475014 | Msa1134850:CDS |
| CTTGGAAGAGATTGCAATTC+TGG | 0.138099 | 7_4:-1478637 | None:intergenic |
| CAATGAATTGCATAAGATTT+TGG | 0.153787 | 7_4:+1474924 | Msa1134850:CDS |
| ACAAGCTCGTGAAGCCTTTA+AGG | 0.155648 | 7_4:+1474978 | Msa1134850:CDS |
| CCCATGCCTTAGGTTGTTTA+AGG | 0.160845 | 7_4:-1478708 | None:intergenic |
| TTCGGCCGCCTGGCAGTTTC+AGG | 0.174448 | 7_4:-1476084 | None:intergenic |
| CCGAAGCTGAATATCCTTAA+AGG | 0.205753 | 7_4:-1474992 | None:intergenic |
| ATGAATATTGAGATTGTTCT+TGG | 0.219578 | 7_4:+1480088 | Msa1134850:three_prime_UTR |
| TGCAGGAATAGCTAGAAAAT+TGG | 0.274864 | 7_4:+1476264 | Msa1134850:intron |
| CTCTTAACTAAGCTTCTTGT+TGG | 0.277492 | 7_4:-1477597 | None:intergenic |
| CTACATGCCTTCAAAGAAAA+AGG | 0.295838 | 7_4:-1476148 | None:intergenic |
| TCTCTTCCAAGCTTCCTCTT+TGG | 0.299326 | 7_4:+1478649 | Msa1134850:CDS |
| TTTGTAAGCAACAACATTAT+AGG | 0.319531 | 7_4:-1479235 | None:intergenic |
| TCCAACAACCATAACATATA+TGG | 0.330352 | 7_4:+1474666 | Msa1134850:five_prime_UTR |
| TTAGGCTGAGTGTAGAATTC+AGG | 0.333949 | 7_4:+1474851 | Msa1134850:intron |
| GCCATATATGTTATGGTTGT+TGG | 0.338789 | 7_4:-1474667 | None:intergenic |
| TTGCCATTGCTAATCCTTCA+TGG | 0.351070 | 7_4:+1479843 | Msa1134850:CDS |
| CACAGCTGCTTTCGGCCGCC+TGG | 0.352234 | 7_4:-1476094 | None:intergenic |
| GCTTCTAGAGTGCTCAGCCC+TGG | 0.353341 | 7_4:+1477555 | Msa1134850:CDS |
| GCTATGGATTATCCAGGATT+TGG | 0.355333 | 7_4:+1476310 | Msa1134850:CDS |
| CACATTGCTTCTAGAGGATC+GGG | 0.360310 | 7_4:+1477630 | Msa1134850:CDS |
| AGTTAAGTCAACCAAAGTTT+AGG | 0.361407 | 7_4:+1474553 | None:intergenic |
| GCTATGGCTACTAGATTTCC+AGG | 0.389057 | 7_4:+1474895 | Msa1134850:exon |
| AGTTTAGGTACCTTTGATCT+TGG | 0.394996 | 7_4:-1476404 | None:intergenic |
| AAATTGGCATGTGCTGGATA+TGG | 0.398369 | 7_4:+1476280 | Msa1134850:CDS |
| ACTTGGATTATCATTTCATC+AGG | 0.402873 | 7_4:-1479985 | None:intergenic |
| TGCAATTCATTGTCAACTCC+TGG | 0.404718 | 7_4:-1474913 | None:intergenic |
| TGCCATTGCTAATCCTTCAT+GGG | 0.412278 | 7_4:+1479844 | Msa1134850:CDS |
| TGCTTGTAATTCACATTCAC+TGG | 0.425960 | 7_4:-1477408 | None:intergenic |
| AGAGATAGGATGAGTGGAAA+TGG | 0.426824 | 7_4:-1474634 | None:intergenic |
| AGATTTGAAGAAGAGAGAAA+TGG | 0.427655 | 7_4:+1478969 | Msa1134850:CDS |
| GCTTACCATTCTCTTCTTGA+GGG | 0.433960 | 7_4:+1479958 | Msa1134850:three_prime_UTR |
| TGCTTACCATTCTCTTCTTG+AGG | 0.435129 | 7_4:+1479957 | Msa1134850:three_prime_UTR |
| AGAACAATCTCAATATTCAT+AGG | 0.436876 | 7_4:-1480085 | None:intergenic |
| CAAGAAGCTTAAACTTTACA+AGG | 0.438282 | 7_4:+1479933 | Msa1134850:three_prime_UTR |
| CAGTAAAACACAGCTGCTTT+CGG | 0.438591 | 7_4:-1476102 | None:intergenic |
| CTTCCTCTTTGGACAATCCA+TGG | 0.443316 | 7_4:+1478660 | Msa1134850:CDS |
| TCAAGAAATAGAAAAGAGAT+TGG | 0.449597 | 7_4:+1479302 | Msa1134850:CDS |
| AGGCATAGCCATATATGTTA+TGG | 0.454761 | 7_4:-1474674 | None:intergenic |
| TGTTATGGTTGTTGGATATG+AGG | 0.457938 | 7_4:-1474659 | None:intergenic |
| GCTAGAAAATTGGCATGTGC+TGG | 0.472592 | 7_4:+1476274 | Msa1134850:CDS |
| CCTTTAAGGATATTCAGCTT+CGG | 0.473133 | 7_4:+1474992 | Msa1134850:CDS |
| AAGCTTGTCAGCAGGAATAG+TGG | 0.473315 | 7_4:+1477456 | Msa1134850:CDS |
| TTGGATATGAGGAAAGAGAT+AGG | 0.476776 | 7_4:-1474648 | None:intergenic |
| ATAATATGGGACCTAAACTT+TGG | 0.477682 | 7_4:-1474564 | None:intergenic |
| ACACATTGGTGCAACAAGAA+TGG | 0.480543 | 7_4:-1478737 | None:intergenic |
| CGGATGTACTGGACATTGGC+AGG | 0.491462 | 7_4:-1477671 | None:intergenic |
| ATGGCGCCATCCCATGCCTT+AGG | 0.492346 | 7_4:-1478718 | None:intergenic |
| TCACATTGCTTCTAGAGGAT+CGG | 0.492380 | 7_4:+1477629 | Msa1134850:CDS |
| TTGCTAGCTCAGATACTCAT+TGG | 0.501169 | 7_4:+1478880 | Msa1134850:CDS |
| AACTAAGCTTCTTGTTGGCG+TGG | 0.501965 | 7_4:-1477592 | None:intergenic |
| TAGAAATCTTCTACAAGAGC+TGG | 0.502129 | 7_4:+1476058 | Msa1134850:CDS |
| CCAGGATTTGGTCTTTCAGA+AGG | 0.502384 | 7_4:+1476322 | Msa1134850:CDS |
| GATTGTCCAAAGAGGAAGCT+TGG | 0.503541 | 7_4:-1478655 | None:intergenic |
| CTTCTAGAGTGCTCAGCCCT+GGG | 0.503638 | 7_4:+1477556 | Msa1134850:CDS |
| ATAGTGGGCTTTCTGCTGCC+AGG | 0.506483 | 7_4:+1477472 | Msa1134850:CDS |
| GGGAACGATGAAAACGGAAA+AGG | 0.508501 | 7_4:-1474711 | None:intergenic |
| AGCGAAATAATGACCCTCGC+AGG | 0.510067 | 7_4:-1477535 | None:intergenic |
| TTCCTCTTTGGACAATCCAT+GGG | 0.527323 | 7_4:+1478661 | Msa1134850:CDS |
| AATAAAATAAAATTGAGGAA+TGG | 0.528960 | 7_4:+1480162 | Msa1134850:three_prime_UTR |
| CCTTCTGAAAGACCAAATCC+TGG | 0.529189 | 7_4:-1476322 | None:intergenic |
| AGCTTGTCAGCAGGAATAGT+GGG | 0.537005 | 7_4:+1477457 | Msa1134850:CDS |
| ACTAAGCTTCTTGTTGGCGT+GGG | 0.538628 | 7_4:-1477591 | None:intergenic |
| TACCTTGGGAACGATGAAAA+CGG | 0.539480 | 7_4:-1474717 | None:intergenic |
| GCTGGTTTCCTGAAACTGCC+AGG | 0.541160 | 7_4:+1476076 | Msa1134850:CDS |
| TCATACGAGGTGAACTCAAA+GGG | 0.541716 | 7_4:+1476033 | Msa1134850:CDS |
| GGTAAAGACGACATTGGCTA+TGG | 0.547698 | 7_4:+1474879 | Msa1134850:exon |
| GAGGAAAGAGATAGGATGAG+TGG | 0.550232 | 7_4:-1474640 | None:intergenic |
| TATTGAGATTGTTCTTGGCA+TGG | 0.551773 | 7_4:+1480093 | Msa1134850:three_prime_UTR |
| ACCTTAAACAACCTAAGGCA+TGG | 0.551832 | 7_4:+1478707 | Msa1134850:CDS |
| TCTTTAGATTGCAGATGACA+TGG | 0.555683 | 7_4:+1478846 | Msa1134850:intron |
| ATAGTACCTTAAAGAGTATG+TGG | 0.557114 | 7_4:-1475020 | None:intergenic |
| GCCATTGCTAATCCTTCATG+GGG | 0.559750 | 7_4:+1479845 | Msa1134850:CDS |
| TTTGCGAGAAGCTTGTCAGC+AGG | 0.559842 | 7_4:+1477448 | Msa1134850:CDS |
| GATGCACCTTAAACAACCTA+AGG | 0.561834 | 7_4:+1478702 | Msa1134850:CDS |
| CAATATCAGCCTCCCCATGA+AGG | 0.562301 | 7_4:-1479857 | None:intergenic |
| AAGATGAATGTTTCAAGCTG+TGG | 0.564559 | 7_4:-1480038 | None:intergenic |
| CTCTTTGGACAATCCATGGG+AGG | 0.564768 | 7_4:+1478664 | Msa1134850:CDS |
| TCAACTAGTGAATCGAAACT+AGG | 0.566144 | 7_4:-1476361 | None:intergenic |
| ACAAAGATAAACCGCGGTTG+TGG | 0.567389 | 7_4:+1479253 | Msa1134850:CDS |
| TAAAGCAACAGCTCCTCCCA+TGG | 0.568099 | 7_4:-1478677 | None:intergenic |
| CATTCTCACATTGCTTCTAG+AGG | 0.571216 | 7_4:+1477624 | Msa1134850:CDS |
| GTCATACGAGGTGAACTCAA+AGG | 0.582659 | 7_4:+1476032 | Msa1134850:intron |
| AGTATCTGAGCTAGCAACCA+TGG | 0.584270 | 7_4:-1478874 | None:intergenic |
| GTTCACCCTCAAGAAGAGAA+TGG | 0.585405 | 7_4:-1479963 | None:intergenic |
| CCTTAAACAACCTAAGGCAT+GGG | 0.589776 | 7_4:+1478708 | Msa1134850:CDS |
| TCCACAAAAGAATTTAGCAG+AGG | 0.592497 | 7_4:+1478936 | Msa1134850:CDS |
| GTGGGATGAAATAATGACCC+AGG | 0.594781 | 7_4:-1477573 | None:intergenic |
| GAGATTTACTCCAAGATCAA+AGG | 0.595424 | 7_4:+1476394 | Msa1134850:CDS |
| ATTGCTAATCCTTCATGGGG+AGG | 0.602643 | 7_4:+1479848 | Msa1134850:CDS |
| TCCCCATGAAGGATTAGCAA+TGG | 0.609252 | 7_4:-1479846 | None:intergenic |
| GGCACGGATGTACTGGACAT+TGG | 0.614527 | 7_4:-1477675 | None:intergenic |
| CAGGTTCATCAACCCTGCGA+GGG | 0.619095 | 7_4:+1477522 | Msa1134850:CDS |
| GCGAAATAATGACCCTCGCA+GGG | 0.619359 | 7_4:-1477534 | None:intergenic |
| GAATGTGAATTACAAGCAGA+CGG | 0.622432 | 7_4:+1477413 | Msa1134850:CDS |
| GCTTTGCAGACTCAATGCGA+TGG | 0.622456 | 7_4:+1475869 | Msa1134850:intron |
| TTGGCGTGGGATGAAAGACC+TGG | 0.624203 | 7_4:-1477490 | None:intergenic |
| CAGATGACATGGTTCCTCCA+TGG | 0.625513 | 7_4:+1478857 | Msa1134850:CDS |
| AAACAACCTAAGGCATGGGA+TGG | 0.626145 | 7_4:+1478712 | Msa1134850:CDS |
| CTCCCATGGATTGTCCAAAG+AGG | 0.649020 | 7_4:-1478663 | None:intergenic |
| GCAGGTTCATCAACCCTGCG+AGG | 0.654193 | 7_4:+1477521 | Msa1134850:CDS |
| TGGGATGAAATAATGACCCA+GGG | 0.656694 | 7_4:-1477572 | None:intergenic |
| GAGAGAGGTAAAGACGACAT+TGG | 0.659166 | 7_4:+1474873 | Msa1134850:five_prime_UTR |
| GAGTGTAGAATTCAGGAGAG+AGG | 0.664486 | 7_4:+1474858 | Msa1134850:five_prime_UTR |
| ACATTGCTTCTAGAGGATCG+GGG | 0.681219 | 7_4:+1477631 | Msa1134850:CDS |
| TTGCTTACAAAGATAAACCG+CGG | 0.712200 | 7_4:+1479247 | Msa1134850:CDS |
| TCGACGGCAGTCCACAACCG+CGG | 0.716565 | 7_4:-1479264 | None:intergenic |
| TACTTCACAACAGTCATACG+AGG | 0.720811 | 7_4:+1476020 | Msa1134850:intron |
| ATCTGAGCTAGCAACCATGG+AGG | 0.731031 | 7_4:-1478871 | None:intergenic |
| GGTTTCCTGAAACTGCCAGG+CGG | 0.739305 | 7_4:+1476079 | Msa1134850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAAATTTTAAGAAAATTA+TGG | + | chr7_4:1476769-1476788 | Msa1134850:intron | 10.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | - | chr7_4:1475185-1475204 | None:intergenic | 15.0% |
| !! | GAACATTATAAAACAAATTA+AGG | - | chr7_4:1475384-1475403 | None:intergenic | 15.0% |
| !!! | TATTCAATTTCATAGTATTT+TGG | + | chr7_4:1475422-1475441 | Msa1134850:intron | 15.0% |
| !! | AAAAAAATTACTTTACACAT+TGG | - | chr7_4:1478754-1478773 | None:intergenic | 15.0% |
| !! | AAACAAAAACAATATTCTAT+TGG | - | chr7_4:1479010-1479029 | None:intergenic | 15.0% |
| !!! | GTTTGATAACTTAAAAATTT+TGG | + | chr7_4:1479026-1479045 | Msa1134850:intron | 15.0% |
| !!! | TTTTTAGTGATATCATTTTA+TGG | + | chr7_4:1480007-1480026 | Msa1134850:three_prime_UTR | 15.0% |
| !! | AATAAAATAAAATTGAGGAA+TGG | + | chr7_4:1480162-1480181 | Msa1134850:three_prime_UTR | 15.0% |
| !!! | TTTTTCTGAGTAGATAATAT+GGG | - | chr7_4:1474580-1474599 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGAGTAGATAATA+TGG | - | chr7_4:1474581-1474600 | None:intergenic | 20.0% |
| !! | CAGAGAATAGTAAAAAAAAA+TGG | - | chr7_4:1474762-1474781 | None:intergenic | 20.0% |
| !! | ATTTCGAAAAAAAATACATG+TGG | - | chr7_4:1475803-1475822 | None:intergenic | 20.0% |
| !! | ATATTGTGAAATTTATTTGC+AGG | + | chr7_4:1476247-1476266 | Msa1134850:intron | 20.0% |
| !! | CGTGTAGAATAATTATTAAA+AGG | + | chr7_4:1476672-1476691 | Msa1134850:intron | 20.0% |
| !!! | ACTTAAAACATACTTTTTTG+TGG | + | chr7_4:1476742-1476761 | Msa1134850:intron | 20.0% |
| !! | TTAAGAAAATTATGGATTTG+AGG | + | chr7_4:1476777-1476796 | Msa1134850:intron | 20.0% |
| !! | GTGTCAAATAAAAAATAAAG+AGG | + | chr7_4:1476970-1476989 | Msa1134850:intron | 20.0% |
| !! | TAGATAATAACTACAAGAAT+CGG | - | chr7_4:1477721-1477740 | None:intergenic | 20.0% |
| !!! | TCTTTTAGTTTAGTATTCAT+AGG | + | chr7_4:1477757-1477776 | Msa1134850:intron | 20.0% |
| !!! | CTTTTAGTTTAGTATTCATA+GGG | + | chr7_4:1477758-1477777 | Msa1134850:intron | 20.0% |
| !!! | GAGTAATTTTTTTAGCTTTA+TGG | + | chr7_4:1477872-1477891 | Msa1134850:intron | 20.0% |
| !!! | ATTTTTTTAGCTTTATGGAA+AGG | + | chr7_4:1477877-1477896 | Msa1134850:intron | 20.0% |
| !! | TCAAATGAAGAATAATAAGA+TGG | - | chr7_4:1477924-1477943 | None:intergenic | 20.0% |
| !!! | GTTTCATTACTAGTTTATAA+AGG | + | chr7_4:1478111-1478130 | Msa1134850:intron | 20.0% |
| !! | CTATGATACTATCTTAATTT+GGG | - | chr7_4:1478187-1478206 | None:intergenic | 20.0% |
| !! | ACTATGATACTATCTTAATT+TGG | - | chr7_4:1478188-1478207 | None:intergenic | 20.0% |
| !! | GTAAAGAAGTCTTAAAATTT+CGG | - | chr7_4:1478394-1478413 | None:intergenic | 20.0% |
| !!! | TGTATATTTTACTTTCCTTT+GGG | + | chr7_4:1478461-1478480 | Msa1134850:intron | 20.0% |
| !! | ATTTCATTATTTATACCCAA+AGG | - | chr7_4:1478479-1478498 | None:intergenic | 20.0% |
| !! | TTTGGGTATAAATAATGAAA+TGG | + | chr7_4:1478478-1478497 | Msa1134850:intron | 20.0% |
| !! | GTAAAAAGTGATATATTTGT+AGG | - | chr7_4:1479054-1479073 | None:intergenic | 20.0% |
| !! | AAATGATATCACTAAAAACT+TGG | - | chr7_4:1480005-1480024 | None:intergenic | 20.0% |
| !!! | AAAAGGTTTGAAATTTTGAG+AGG | - | chr7_4:1474697-1474716 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAAGTACCTT+GGG | - | chr7_4:1474734-1474753 | None:intergenic | 25.0% |
| !!! | TTTTTTTTGTCAAAGTACCT+TGG | - | chr7_4:1474735-1474754 | None:intergenic | 25.0% |
| !!! | AATATTGTTCCTTTTTCAAG+TGG | + | chr7_4:1474795-1474814 | Msa1134850:intron | 25.0% |
| !!! | ATATTGTTCCTTTTTCAAGT+GGG | + | chr7_4:1474796-1474815 | Msa1134850:intron | 25.0% |
| !! | CAATGAATTGCATAAGATTT+TGG | + | chr7_4:1474924-1474943 | Msa1134850:CDS | 25.0% |
| !! | TAAGATTTTGGATGCTAATA+TGG | + | chr7_4:1474936-1474955 | Msa1134850:CDS | 25.0% |
| ! | TATTATTCATAAGCTTGTCA+AGG | + | chr7_4:1475098-1475117 | Msa1134850:intron | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | + | chr7_4:1475210-1475229 | Msa1134850:intron | 25.0% |
| ! | AAAAGTAACTCAATCTGATT+GGG | + | chr7_4:1475358-1475377 | Msa1134850:intron | 25.0% |
| ! | TATATCTTGACTAGATTGTT+TGG | - | chr7_4:1475746-1475765 | None:intergenic | 25.0% |
| ! | AATACATGTGGAAATTTAAG+AGG | - | chr7_4:1475791-1475810 | None:intergenic | 25.0% |
| !! | CTCAGAGAAAGTAAAAATTT+TGG | - | chr7_4:1475838-1475857 | None:intergenic | 25.0% |
| ! | TGTAGTATTCAATTTCAACA+TGG | - | chr7_4:1476462-1476481 | None:intergenic | 25.0% |
| ! | ATCAAAAGGAAATATTCATC+AGG | - | chr7_4:1476583-1476602 | None:intergenic | 25.0% |
| ! | GTACAAGATATATCATCAAA+AGG | - | chr7_4:1476597-1476616 | None:intergenic | 25.0% |
| ! | TTATTAAAAGGACACAACTT+AGG | + | chr7_4:1476684-1476703 | Msa1134850:intron | 25.0% |
| !!! | ATAAAGAGGAATTTTTCAGT+AGG | + | chr7_4:1476984-1477003 | Msa1134850:intron | 25.0% |
| !!! | TAAAGAGGAATTTTTCAGTA+GGG | + | chr7_4:1476985-1477004 | Msa1134850:intron | 25.0% |
| ! | TAATATCAATAGTAGAGAGT+AGG | + | chr7_4:1477106-1477125 | Msa1134850:intron | 25.0% |
| ! | AATATCAATAGTAGAGAGTA+GGG | + | chr7_4:1477107-1477126 | Msa1134850:intron | 25.0% |
| !! | TTGTAGTTATTATCTAGCTT+AGG | + | chr7_4:1477725-1477744 | Msa1134850:intron | 25.0% |
| ! | TGTTTGCAGTTAGAATAATA+AGG | - | chr7_4:1477828-1477847 | None:intergenic | 25.0% |
| ! | TTGTGCAAAATAGAATTTCT+TGG | + | chr7_4:1478004-1478023 | Msa1134850:intron | 25.0% |
| ! | ATAGTCTATTCAAGATCAAT+TGG | + | chr7_4:1478203-1478222 | Msa1134850:intron | 25.0% |
| ! | TAGTCTATTCAAGATCAATT+GGG | + | chr7_4:1478204-1478223 | Msa1134850:intron | 25.0% |
| ! | AAACCATATCTCATCTAATA+TGG | - | chr7_4:1478300-1478319 | None:intergenic | 25.0% |
| ! | ATGAGATATGGTTTCAAAAT+CGG | + | chr7_4:1478306-1478325 | Msa1134850:intron | 25.0% |
| !! | AAAATCGGTTTATAAATCTG+AGG | + | chr7_4:1478321-1478340 | Msa1134850:intron | 25.0% |
| !!! | AATTTTAAGACTTCTTTACC+TGG | + | chr7_4:1478395-1478414 | Msa1134850:intron | 25.0% |
| !! | GTGTATATTTTACTTTCCTT+TGG | + | chr7_4:1478460-1478479 | Msa1134850:intron | 25.0% |
| ! | TGCATACAAGTTAATAAAAC+TGG | + | chr7_4:1478549-1478568 | Msa1134850:intron | 25.0% |
| !! | AGTGAATAATCAAACTTTTC+TGG | + | chr7_4:1479195-1479214 | Msa1134850:intron | 25.0% |
| ! | TTTGTAAGCAACAACATTAT+AGG | - | chr7_4:1479238-1479257 | None:intergenic | 25.0% |
| ! | TCAAGAAATAGAAAAGAGAT+TGG | + | chr7_4:1479302-1479321 | Msa1134850:CDS | 25.0% |
| !! | ACAAGTTGAATTCTAAAGAT+AGG | - | chr7_4:1479340-1479359 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGCAATGCATTTA+TGG | + | chr7_4:1479415-1479434 | Msa1134850:intron | 25.0% |
| ! | AGCAAATGGAAAAAGAAAAA+CGG | - | chr7_4:1479635-1479654 | None:intergenic | 25.0% |
| !!! | CTGTTAAAGTTGATATGTAA+TGG | + | chr7_4:1479799-1479818 | Msa1134850:intron | 25.0% |
| !!! | GTAATGGTTTTGATGATTAT+AGG | + | chr7_4:1479815-1479834 | Msa1134850:intron | 25.0% |
| ! | AGAACAATCTCAATATTCAT+AGG | - | chr7_4:1480088-1480107 | None:intergenic | 25.0% |
| ! | ATGAATATTGAGATTGTTCT+TGG | + | chr7_4:1480088-1480107 | Msa1134850:three_prime_UTR | 25.0% |
| TCCAACAACCATAACATATA+TGG | + | chr7_4:1474666-1474685 | Msa1134850:five_prime_UTR | 30.0% | |
| !!! | TATTGTTCCTTTTTCAAGTG+GGG | + | chr7_4:1474797-1474816 | Msa1134850:intron | 30.0% |
| ! | ATAGTACCTTAAAGAGTATG+TGG | - | chr7_4:1475023-1475042 | None:intergenic | 30.0% |
| CAAAAGTAACTCAATCTGAT+TGG | + | chr7_4:1475357-1475376 | Msa1134850:intron | 30.0% | |
| CACTCAGATTCTCAAATAAA+GGG | - | chr7_4:1475492-1475511 | None:intergenic | 30.0% | |
| ACACTCAGATTCTCAAATAA+AGG | - | chr7_4:1475493-1475512 | None:intergenic | 30.0% | |
| TTCATATTCATGTTGTTCTG+TGG | + | chr7_4:1475568-1475587 | Msa1134850:intron | 30.0% | |
| ! | ATGTGGTTAGGTTTTCTTAA+AGG | + | chr7_4:1475622-1475641 | Msa1134850:intron | 30.0% |
| TGATAGATAGTTCATAGAGT+AGG | + | chr7_4:1475669-1475688 | Msa1134850:intron | 30.0% | |
| AACCATGAATAAATTCAACG+AGG | + | chr7_4:1475712-1475731 | Msa1134850:intron | 30.0% | |
| CAAGTAATGCAAATACAGAA+AGG | - | chr7_4:1475999-1476018 | None:intergenic | 30.0% | |
| TGAATACTACAAATCTACTG+TGG | + | chr7_4:1476471-1476490 | Msa1134850:intron | 30.0% | |
| AGTATAATAGTGTACCATAG+AGG | + | chr7_4:1476521-1476540 | Msa1134850:intron | 30.0% | |
| TTATGGATTTGAGGAAATCA+TGG | + | chr7_4:1476786-1476805 | Msa1134850:intron | 30.0% | |
| TATGGATTTGAGGAAATCAT+GGG | + | chr7_4:1476787-1476806 | Msa1134850:intron | 30.0% | |
| TCTCCTTTATAACCAAACTT+AGG | - | chr7_4:1476868-1476887 | None:intergenic | 30.0% | |
| AAAGGAGAGTTATGTTAAAC+AGG | + | chr7_4:1476880-1476899 | Msa1134850:intron | 30.0% | |
| AAGGAGAGTTATGTTAAACA+GGG | + | chr7_4:1476881-1476900 | Msa1134850:intron | 30.0% | |
| AACTAGAACTACAACATCAA+AGG | + | chr7_4:1476923-1476942 | Msa1134850:intron | 30.0% | |
| GAACGATAGATACCTAAATA+GGG | + | chr7_4:1477129-1477148 | Msa1134850:intron | 30.0% | |
| ATAGATACCTAAATAGGGTA+GGG | + | chr7_4:1477134-1477153 | Msa1134850:intron | 30.0% | |
| GCTAATTCGTTCCATATATA+AGG | - | chr7_4:1477165-1477184 | None:intergenic | 30.0% | |
| TTTACTTAGTTGTTAGACTC+AGG | + | chr7_4:1477351-1477370 | Msa1134850:intron | 30.0% | |
| ! | TAGCTTGCAAAATATGACAA+AGG | - | chr7_4:1477785-1477804 | None:intergenic | 30.0% |
| GAAACATATAAGATGACAGT+AGG | - | chr7_4:1478096-1478115 | None:intergenic | 30.0% | |
| TTAACTCAACCATGTAAAAC+CGG | - | chr7_4:1478158-1478177 | None:intergenic | 30.0% | |
| AGTCCATATTAGATGAGATA+TGG | + | chr7_4:1478294-1478313 | Msa1134850:intron | 30.0% | |
| AATATCGGCATGTAAAGTAA+GGG | - | chr7_4:1478350-1478369 | None:intergenic | 30.0% | |
| ! | AAGTAAAAGTTCAAGTTTCC+AGG | - | chr7_4:1478416-1478435 | None:intergenic | 30.0% |
| ! | CTTGAACTTTTACTTTCACA+TGG | + | chr7_4:1478421-1478440 | Msa1134850:intron | 30.0% |
| CGAAACTATATCCTTACAAA+AGG | + | chr7_4:1478589-1478608 | Msa1134850:intron | 30.0% | |
| CTATATCCTTACAAAAGGTT+TGG | + | chr7_4:1478594-1478613 | Msa1134850:intron | 30.0% | |
| ! | AATGAACCAAACCTTTTGTA+AGG | - | chr7_4:1478603-1478622 | None:intergenic | 30.0% |
| !! | TTCTGAAACAATTTAACTCC+AGG | + | chr7_4:1478776-1478795 | Msa1134850:intron | 30.0% |
| GAAAATCATACAAAAACACC+TGG | - | chr7_4:1478797-1478816 | None:intergenic | 30.0% | |
| ! | ATCTAAAGAAATAGAGTGTC+TGG | - | chr7_4:1478835-1478854 | None:intergenic | 30.0% |
| AGATTTGAAGAAGAGAGAAA+TGG | + | chr7_4:1478969-1478988 | Msa1134850:CDS | 30.0% | |
| GATTTAAGTCAGAAAGCAAA+TGG | - | chr7_4:1479649-1479668 | None:intergenic | 30.0% | |
| ! | CAATTCACGATTCTGAAAAT+AGG | + | chr7_4:1479715-1479734 | Msa1134850:intron | 30.0% |
| ! | AAAAATGTTTTGCTCACAGA+GGG | - | chr7_4:1479891-1479910 | None:intergenic | 30.0% |
| ! | TAAAAATGTTTTGCTCACAG+AGG | - | chr7_4:1479892-1479911 | None:intergenic | 30.0% |
| CAAGAAGCTTAAACTTTACA+AGG | + | chr7_4:1479933-1479952 | Msa1134850:three_prime_UTR | 30.0% | |
| ACTTGGATTATCATTTCATC+AGG | - | chr7_4:1479988-1480007 | None:intergenic | 30.0% | |
| TTGGATATGAGGAAAGAGAT+AGG | - | chr7_4:1474651-1474670 | None:intergenic | 35.0% | |
| TGTTATGGTTGTTGGATATG+AGG | - | chr7_4:1474662-1474681 | None:intergenic | 35.0% | |
| GCCATATATGTTATGGTTGT+TGG | - | chr7_4:1474670-1474689 | None:intergenic | 35.0% | |
| AGGCATAGCCATATATGTTA+TGG | - | chr7_4:1474677-1474696 | None:intergenic | 35.0% | |
| !!! | ATTGCTTTTTGTGACCCTTT+AGG | + | chr7_4:1474833-1474852 | Msa1134850:intron | 35.0% |
| AATTCTACACTCAGCCTAAA+GGG | - | chr7_4:1474850-1474869 | None:intergenic | 35.0% | |
| ! | CCTTTAAGGATATTCAGCTT+CGG | + | chr7_4:1474992-1475011 | Msa1134850:CDS | 35.0% |
| GATTGACCACATACTCTTTA+AGG | + | chr7_4:1475014-1475033 | Msa1134850:CDS | 35.0% | |
| ATATTCACCAATGACACGTT+TGG | + | chr7_4:1475049-1475068 | Msa1134850:intron | 35.0% | |
| ATCACTATGAAGCACAGATA+CGG | + | chr7_4:1475142-1475161 | Msa1134850:intron | 35.0% | |
| ATTCTCAAATAAAGGGATCC+TGG | - | chr7_4:1475485-1475504 | None:intergenic | 35.0% | |
| !! | TAGTCAATTGGTGCTATTCA+TGG | + | chr7_4:1475591-1475610 | Msa1134850:intron | 35.0% |
| TATTCATGGTAGTTGAGATG+TGG | + | chr7_4:1475605-1475624 | Msa1134850:intron | 35.0% | |
| AGATAGTTCATAGAGTAGGA+TGG | + | chr7_4:1475673-1475692 | Msa1134850:intron | 35.0% | |
| TGCCTCGTTGAATTTATTCA+TGG | - | chr7_4:1475717-1475736 | None:intergenic | 35.0% | |
| ! | TTTAAGAGGCACATTCTAAG+AGG | - | chr7_4:1475777-1475796 | None:intergenic | 35.0% |
| ATTGAGTCTGCAAAGCATAA+AGG | - | chr7_4:1475865-1475884 | None:intergenic | 35.0% | |
| !! | ATGCGATGGACTAAAAATGA+AGG | + | chr7_4:1475883-1475902 | Msa1134850:CDS | 35.0% |
| !! | GAAAAGGTATTAGCATAGCA+CGG | - | chr7_4:1475974-1475993 | None:intergenic | 35.0% |
| CAAATACAGAAAGGAGGAAA+AGG | - | chr7_4:1475990-1476009 | None:intergenic | 35.0% | |
| GTAATGCAAATACAGAAAGG+AGG | - | chr7_4:1475996-1476015 | None:intergenic | 35.0% | |
| TAGAAATCTTCTACAAGAGC+TGG | + | chr7_4:1476058-1476077 | Msa1134850:CDS | 35.0% | |
| ! | GTGTTTTACTGTCATGGTTA+TGG | + | chr7_4:1476114-1476133 | Msa1134850:CDS | 35.0% |
| ! | ACTTCCACCTTTTTCTTTGA+AGG | + | chr7_4:1476141-1476160 | Msa1134850:CDS | 35.0% |
| CTACATGCCTTCAAAGAAAA+AGG | - | chr7_4:1476151-1476170 | None:intergenic | 35.0% | |
| TGCAGGAATAGCTAGAAAAT+TGG | + | chr7_4:1476264-1476283 | Msa1134850:intron | 35.0% | |
| TCAACTAGTGAATCGAAACT+AGG | - | chr7_4:1476364-1476383 | None:intergenic | 35.0% | |
| GAGATTTACTCCAAGATCAA+AGG | + | chr7_4:1476394-1476413 | Msa1134850:CDS | 35.0% | |
| AGTTTAGGTACCTTTGATCT+TGG | - | chr7_4:1476407-1476426 | None:intergenic | 35.0% | |
| ! | GGTAGAATTAGTTTCTTGTC+AGG | + | chr7_4:1476492-1476511 | Msa1134850:intron | 35.0% |
| ! | GAATTAGTTTCTTGTCAGGA+AGG | + | chr7_4:1476496-1476515 | Msa1134850:intron | 35.0% |
| GTACTTAAGGCATGAAGTTA+AGG | + | chr7_4:1476549-1476568 | Msa1134850:intron | 35.0% | |
| ACTACTTTCAGAGCAAAAAC+TGG | - | chr7_4:1476619-1476638 | None:intergenic | 35.0% | |
| CTACACGAATCTTTGTATGA+TGG | - | chr7_4:1476659-1476678 | None:intergenic | 35.0% | |
| !! | ACAACACGAAAAAGTACCTA+AGG | - | chr7_4:1476717-1476736 | None:intergenic | 35.0% |
| AAGAACACGAAAAACACCTA+AGG | + | chr7_4:1476835-1476854 | Msa1134850:intron | 35.0% | |
| AAACTTAGGTGCATTTCCTT+AGG | - | chr7_4:1476854-1476873 | None:intergenic | 35.0% | |
| TAAGGAAATGCACCTAAGTT+TGG | + | chr7_4:1476853-1476872 | Msa1134850:intron | 35.0% | |
| GCACCTAAGTTTGGTTATAA+AGG | + | chr7_4:1476862-1476881 | Msa1134850:intron | 35.0% | |
| TTATGTTAAACAGGGCTCTT+AGG | + | chr7_4:1476889-1476908 | Msa1134850:intron | 35.0% | |
| !! | GTAGTTCTAGTTGTATCATC+TGG | - | chr7_4:1476915-1476934 | None:intergenic | 35.0% |
| !! | CTCTCAAAGCATTTGTGTTT+TGG | - | chr7_4:1476951-1476970 | None:intergenic | 35.0% |
| ! | CAACGAGTTTTACATAGGAA+AGG | - | chr7_4:1477080-1477099 | None:intergenic | 35.0% |
| ! | ACAGACAACGAGTTTTACAT+AGG | - | chr7_4:1477085-1477104 | None:intergenic | 35.0% |
| GGAACGATAGATACCTAAAT+AGG | + | chr7_4:1477128-1477147 | Msa1134850:intron | 35.0% | |
| GATAGATACCTAAATAGGGT+AGG | + | chr7_4:1477133-1477152 | Msa1134850:intron | 35.0% | |
| TGGTAAGGAATCTGAATAAG+AGG | - | chr7_4:1477230-1477249 | None:intergenic | 35.0% | |
| TATTCAGATTCCTTACCACA+AGG | + | chr7_4:1477232-1477251 | Msa1134850:intron | 35.0% | |
| ATTAATCAGTAAAGCAGGAC+AGG | - | chr7_4:1477300-1477319 | None:intergenic | 35.0% | |
| CGAAGATTAATCAGTAAAGC+AGG | - | chr7_4:1477305-1477324 | None:intergenic | 35.0% | |
| TGCTTGTAATTCACATTCAC+TGG | - | chr7_4:1477411-1477430 | None:intergenic | 35.0% | |
| GAATGTGAATTACAAGCAGA+CGG | + | chr7_4:1477413-1477432 | Msa1134850:CDS | 35.0% | |
| CTCTTAACTAAGCTTCTTGT+TGG | - | chr7_4:1477600-1477619 | None:intergenic | 35.0% | |
| ACCTATGTACCTTTCTACTT+AGG | + | chr7_4:1477951-1477970 | Msa1134850:intron | 35.0% | |
| ! | TCCTAAGTAGAAAGGTACAT+AGG | - | chr7_4:1477955-1477974 | None:intergenic | 35.0% |
| CACTAACTTCCTAAGTAGAA+AGG | - | chr7_4:1477963-1477982 | None:intergenic | 35.0% | |
| TCAATTGGGTTATCTGCTAT+TGG | + | chr7_4:1478218-1478237 | Msa1134850:intron | 35.0% | |
| CAATTGGGTTATCTGCTATT+GGG | + | chr7_4:1478219-1478238 | Msa1134850:intron | 35.0% | |
| CAATATCGGCATGTAAAGTA+AGG | - | chr7_4:1478351-1478370 | None:intergenic | 35.0% | |
| CTTTACATGCCGATATTGTA+CGG | + | chr7_4:1478353-1478372 | Msa1134850:intron | 35.0% | |
| CTAACTCAACCGTACAATAT+CGG | - | chr7_4:1478365-1478384 | None:intergenic | 35.0% | |
| TCTTTAGATTGCAGATGACA+TGG | + | chr7_4:1478846-1478865 | Msa1134850:intron | 35.0% | |
| ! | TGTGGAACTAACTTTTGCTT+TGG | - | chr7_4:1478922-1478941 | None:intergenic | 35.0% |
| TCCACAAAAGAATTTAGCAG+AGG | + | chr7_4:1478936-1478955 | Msa1134850:CDS | 35.0% | |
| TTGCTTACAAAGATAAACCG+CGG | + | chr7_4:1479247-1479266 | Msa1134850:CDS | 35.0% | |
| !!! | AGTAGTTTTAAGCATCTCGA+CGG | - | chr7_4:1479283-1479302 | None:intergenic | 35.0% |
| ! | AAGTTTTCTTCTCTTCTCCT+TGG | + | chr7_4:1479392-1479411 | Msa1134850:intron | 35.0% |
| ATGCATTGCAAAACAATCCA+AGG | - | chr7_4:1479412-1479431 | None:intergenic | 35.0% | |
| CACTAGAGATTCACATTGAT+TGG | - | chr7_4:1479492-1479511 | None:intergenic | 35.0% | |
| ATGCAAAGCTGACAAAAAGT+GGG | - | chr7_4:1479606-1479625 | None:intergenic | 35.0% | |
| TATGCAAAGCTGACAAAAAG+TGG | - | chr7_4:1479607-1479626 | None:intergenic | 35.0% | |
| TCAAAGTCTTCAGTATTGCA+TGG | - | chr7_4:1479776-1479795 | None:intergenic | 35.0% | |
| AAGATGAATGTTTCAAGCTG+TGG | - | chr7_4:1480041-1480060 | None:intergenic | 35.0% | |
| TATTGAGATTGTTCTTGGCA+TGG | + | chr7_4:1480093-1480112 | Msa1134850:three_prime_UTR | 35.0% | |
| AGAGATAGGATGAGTGGAAA+TGG | - | chr7_4:1474637-1474656 | None:intergenic | 40.0% | |
| TACCTTGGGAACGATGAAAA+CGG | - | chr7_4:1474720-1474739 | None:intergenic | 40.0% | |
| GAATTCTACACTCAGCCTAA+AGG | - | chr7_4:1474851-1474870 | None:intergenic | 40.0% | |
| TTAGGCTGAGTGTAGAATTC+AGG | + | chr7_4:1474851-1474870 | Msa1134850:intron | 40.0% | |
| TGCAATTCATTGTCAACTCC+TGG | - | chr7_4:1474916-1474935 | None:intergenic | 40.0% | |
| CCGAAGCTGAATATCCTTAA+AGG | - | chr7_4:1474995-1475014 | None:intergenic | 40.0% | |
| AGTCAATCCAAACGTGTCAT+TGG | - | chr7_4:1475059-1475078 | None:intergenic | 40.0% | |
| TATGAAGCATAGACACTCCT+CGG | - | chr7_4:1475250-1475269 | None:intergenic | 40.0% | |
| CTATGCTTCATAGACGTACA+AGG | + | chr7_4:1475258-1475277 | Msa1134850:intron | 40.0% | |
| GATCCTGGTAATCCAAAGTT+CGG | - | chr7_4:1475470-1475489 | None:intergenic | 40.0% | |
| GTTGTTCTGTGGTAGTCAAT+TGG | + | chr7_4:1475579-1475598 | Msa1134850:intron | 40.0% | |
| ATGGTAGTTGAGATGTGGTT+AGG | + | chr7_4:1475610-1475629 | Msa1134850:intron | 40.0% | |
| !! | CGATGGACTAAAAATGAAGG+AGG | + | chr7_4:1475886-1475905 | Msa1134850:CDS | 40.0% |
| TACTTCACAACAGTCATACG+AGG | + | chr7_4:1476020-1476039 | Msa1134850:intron | 40.0% | |
| TCATACGAGGTGAACTCAAA+GGG | + | chr7_4:1476033-1476052 | Msa1134850:CDS | 40.0% | |
| ! | CAGTAAAACACAGCTGCTTT+CGG | - | chr7_4:1476105-1476124 | None:intergenic | 40.0% |
| CATGCCTTCAAAGAAAAAGG+TGG | - | chr7_4:1476148-1476167 | None:intergenic | 40.0% | |
| ! | TAGTAGCTGGTGTTAAGTTC+TGG | + | chr7_4:1476168-1476187 | Msa1134850:intron | 40.0% |
| AAATTGGCATGTGCTGGATA+TGG | + | chr7_4:1476280-1476299 | Msa1134850:CDS | 40.0% | |
| ! | TGGATATGGAGTTTTCGCTA+TGG | + | chr7_4:1476294-1476313 | Msa1134850:CDS | 40.0% |
| !! | GTTTTCGCTATGGATTATCC+AGG | + | chr7_4:1476304-1476323 | Msa1134850:CDS | 40.0% |
| ! | GCTATGGATTATCCAGGATT+TGG | + | chr7_4:1476310-1476329 | Msa1134850:CDS | 40.0% |
| !! | CTTAAGTACTGATGCCTCTA+TGG | - | chr7_4:1476538-1476557 | None:intergenic | 40.0% |
| !! | CATAGAGGCATCAGTACTTA+AGG | + | chr7_4:1476536-1476555 | Msa1134850:intron | 40.0% |
| CAACTTAGGTGTGTTTCCTT+AGG | + | chr7_4:1476698-1476717 | Msa1134850:intron | 40.0% | |
| ! | TGAAAACATGAGTTGACCTC+AGG | + | chr7_4:1477020-1477039 | Msa1134850:intron | 40.0% |
| ! | GAAAACATGAGTTGACCTCA+GGG | + | chr7_4:1477021-1477040 | Msa1134850:intron | 40.0% |
| ! | AAAACATGAGTTGACCTCAG+GGG | + | chr7_4:1477022-1477041 | Msa1134850:intron | 40.0% |
| ATACCTAAATAGGGTAGGGA+TGG | + | chr7_4:1477138-1477157 | Msa1134850:intron | 40.0% | |
| GTAGGGATGGTCCTTATATA+TGG | + | chr7_4:1477151-1477170 | Msa1134850:intron | 40.0% | |
| CTCAGGCCATATGGATAATA+CGG | + | chr7_4:1477204-1477223 | Msa1134850:intron | 40.0% | |
| AAGAGGCCGTATTATCCATA+TGG | - | chr7_4:1477213-1477232 | None:intergenic | 40.0% | |
| ATGAATGCACAAGCATTCAG+AGG | + | chr7_4:1477325-1477344 | Msa1134850:intron | 40.0% | |
| !!! | GATGAACCTGCCTTTTTTGT+TGG | - | chr7_4:1477512-1477531 | None:intergenic | 40.0% |
| TGGGATGAAATAATGACCCA+GGG | - | chr7_4:1477575-1477594 | None:intergenic | 40.0% | |
| CATTCTCACATTGCTTCTAG+AGG | + | chr7_4:1477624-1477643 | Msa1134850:CDS | 40.0% | |
| ! | TCACATTGCTTCTAGAGGAT+CGG | + | chr7_4:1477629-1477648 | Msa1134850:CDS | 40.0% |
| ACAAGAATCGGTGTGCTAAT+CGG | - | chr7_4:1477709-1477728 | None:intergenic | 40.0% | |
| CGATATTGTACGGTTGAGTT+AGG | + | chr7_4:1478363-1478382 | Msa1134850:intron | 40.0% | |
| CTTGGAAGAGATTGCAATTC+TGG | - | chr7_4:1478640-1478659 | None:intergenic | 40.0% | |
| TTCCTCTTTGGACAATCCAT+GGG | + | chr7_4:1478661-1478680 | Msa1134850:CDS | 40.0% | |
| GATGCACCTTAAACAACCTA+AGG | + | chr7_4:1478702-1478721 | Msa1134850:CDS | 40.0% | |
| ACCTTAAACAACCTAAGGCA+TGG | + | chr7_4:1478707-1478726 | Msa1134850:CDS | 40.0% | |
| CCTTAAACAACCTAAGGCAT+GGG | + | chr7_4:1478708-1478727 | Msa1134850:CDS | 40.0% | |
| ACACATTGGTGCAACAAGAA+TGG | - | chr7_4:1478740-1478759 | None:intergenic | 40.0% | |
| TTGCTAGCTCAGATACTCAT+TGG | + | chr7_4:1478880-1478899 | Msa1134850:CDS | 40.0% | |
| ! | GCCTCTGCTAAATTCTTTTG+TGG | - | chr7_4:1478940-1478959 | None:intergenic | 40.0% |
| TTGCCATTGCTAATCCTTCA+TGG | + | chr7_4:1479843-1479862 | Msa1134850:CDS | 40.0% | |
| TGCCATTGCTAATCCTTCAT+GGG | + | chr7_4:1479844-1479863 | Msa1134850:CDS | 40.0% | |
| TGCTTACCATTCTCTTCTTG+AGG | + | chr7_4:1479957-1479976 | Msa1134850:three_prime_UTR | 40.0% | |
| GCTTACCATTCTCTTCTTGA+GGG | + | chr7_4:1479958-1479977 | Msa1134850:three_prime_UTR | 40.0% | |
| GAGGAAAGAGATAGGATGAG+TGG | - | chr7_4:1474643-1474662 | None:intergenic | 45.0% | |
| GGGAACGATGAAAACGGAAA+AGG | - | chr7_4:1474714-1474733 | None:intergenic | 45.0% | |
| ! | TTCCGTTTTCATCGTTCCCA+AGG | + | chr7_4:1474715-1474734 | Msa1134850:five_prime_UTR | 45.0% |
| TCACACACCCCACTTGAAAA+AGG | - | chr7_4:1474807-1474826 | None:intergenic | 45.0% | |
| GAGTGTAGAATTCAGGAGAG+AGG | + | chr7_4:1474858-1474877 | Msa1134850:five_prime_UTR | 45.0% | |
| GAGAGAGGTAAAGACGACAT+TGG | + | chr7_4:1474873-1474892 | Msa1134850:five_prime_UTR | 45.0% | |
| ! | GGTAAAGACGACATTGGCTA+TGG | + | chr7_4:1474879-1474898 | Msa1134850:exon | 45.0% |
| GCTATGGCTACTAGATTTCC+AGG | + | chr7_4:1474895-1474914 | Msa1134850:exon | 45.0% | |
| ACAAGCTCGTGAAGCCTTTA+AGG | + | chr7_4:1474978-1474997 | Msa1134850:CDS | 45.0% | |
| GGCCAGACTTTACTTATCTC+CGG | + | chr7_4:1475443-1475462 | Msa1134850:intron | 45.0% | |
| GCCAGACTTTACTTATCTCC+GGG | + | chr7_4:1475444-1475463 | Msa1134850:intron | 45.0% | |
| GTCATACGAGGTGAACTCAA+AGG | + | chr7_4:1476032-1476051 | Msa1134850:intron | 45.0% | |
| ! | GCAGCTGTGTTTTACTGTCA+TGG | + | chr7_4:1476108-1476127 | Msa1134850:CDS | 45.0% |
| ! | CTTTGAAGGCATGTAGTAGC+TGG | + | chr7_4:1476155-1476174 | Msa1134850:intron | 45.0% |
| GCTAGAAAATTGGCATGTGC+TGG | + | chr7_4:1476274-1476293 | Msa1134850:CDS | 45.0% | |
| ! | CCTTCTGAAAGACCAAATCC+TGG | - | chr7_4:1476325-1476344 | None:intergenic | 45.0% |
| ! | CCAGGATTTGGTCTTTCAGA+AGG | + | chr7_4:1476322-1476341 | Msa1134850:CDS | 45.0% |
| !! | CAAAGGTACCTAAACTCGCA+TGG | + | chr7_4:1476411-1476430 | Msa1134850:intron | 45.0% |
| ACACAGTTCCATGCGAGTTT+AGG | - | chr7_4:1476422-1476441 | None:intergenic | 45.0% | |
| CTGAGACATAAGGCTTGTCA+GGG | - | chr7_4:1477189-1477208 | None:intergenic | 45.0% | |
| TCCATATGGCCTGAGACATA+AGG | - | chr7_4:1477199-1477218 | None:intergenic | 45.0% | |
| ATTCCTTACCACAAGGTCGA+TGG | + | chr7_4:1477239-1477258 | Msa1134850:intron | 45.0% | |
| TTCCTTACCACAAGGTCGAT+GGG | + | chr7_4:1477240-1477259 | Msa1134850:intron | 45.0% | |
| TAAAGCAGGACAGGAACAGT+AGG | - | chr7_4:1477291-1477310 | None:intergenic | 45.0% | |
| AATGCACAAGCATTCAGAGG+TGG | + | chr7_4:1477328-1477347 | Msa1134850:intron | 45.0% | |
| AATCAATGCAGAGCGACAGT+TGG | - | chr7_4:1477378-1477397 | None:intergenic | 45.0% | |
| AAGCTTGTCAGCAGGAATAG+TGG | + | chr7_4:1477456-1477475 | Msa1134850:CDS | 45.0% | |
| AGCTTGTCAGCAGGAATAGT+GGG | + | chr7_4:1477457-1477476 | Msa1134850:CDS | 45.0% | |
| TCATCCCACGCCAACAAAAA+AGG | + | chr7_4:1477499-1477518 | Msa1134850:CDS | 45.0% | |
| GTGGGATGAAATAATGACCC+AGG | - | chr7_4:1477576-1477595 | None:intergenic | 45.0% | |
| ACTAAGCTTCTTGTTGGCGT+GGG | - | chr7_4:1477594-1477613 | None:intergenic | 45.0% | |
| AACTAAGCTTCTTGTTGGCG+TGG | - | chr7_4:1477595-1477614 | None:intergenic | 45.0% | |
| ! | CACATTGCTTCTAGAGGATC+GGG | + | chr7_4:1477630-1477649 | Msa1134850:CDS | 45.0% |
| ! | ACATTGCTTCTAGAGGATCG+GGG | + | chr7_4:1477631-1477650 | Msa1134850:CDS | 45.0% |
| AAAACCGGCATGTAAGGTGA+GGG | - | chr7_4:1478143-1478162 | None:intergenic | 45.0% | |
| TAAAACCGGCATGTAAGGTG+AGG | - | chr7_4:1478144-1478163 | None:intergenic | 45.0% | |
| CCATGTAAAACCGGCATGTA+AGG | - | chr7_4:1478149-1478168 | None:intergenic | 45.0% | |
| !!! | CCTTACATGCCGGTTTTACA+TGG | + | chr7_4:1478146-1478165 | Msa1134850:intron | 45.0% |
| TCTCTTCCAAGCTTCCTCTT+TGG | + | chr7_4:1478649-1478668 | Msa1134850:CDS | 45.0% | |
| GATTGTCCAAAGAGGAAGCT+TGG | - | chr7_4:1478658-1478677 | None:intergenic | 45.0% | |
| CTTCCTCTTTGGACAATCCA+TGG | + | chr7_4:1478660-1478679 | Msa1134850:CDS | 45.0% | |
| ! | CCCATGCCTTAGGTTGTTTA+AGG | - | chr7_4:1478711-1478730 | None:intergenic | 45.0% |
| AAACAACCTAAGGCATGGGA+TGG | + | chr7_4:1478712-1478731 | Msa1134850:CDS | 45.0% | |
| AGTATCTGAGCTAGCAACCA+TGG | - | chr7_4:1478877-1478896 | None:intergenic | 45.0% | |
| ACAAAGATAAACCGCGGTTG+TGG | + | chr7_4:1479253-1479272 | Msa1134850:CDS | 45.0% | |
| TCAGGTAGTGATTCGCTAGA+AGG | - | chr7_4:1479570-1479589 | None:intergenic | 45.0% | |
| GTGGGCAATTACACAAGTTC+AGG | - | chr7_4:1479588-1479607 | None:intergenic | 45.0% | |
| GCCATTGCTAATCCTTCATG+GGG | + | chr7_4:1479845-1479864 | Msa1134850:CDS | 45.0% | |
| ! | TCCCCATGAAGGATTAGCAA+TGG | - | chr7_4:1479849-1479868 | None:intergenic | 45.0% |
| ATTGCTAATCCTTCATGGGG+AGG | + | chr7_4:1479848-1479867 | Msa1134850:CDS | 45.0% | |
| GTTCACCCTCAAGAAGAGAA+TGG | - | chr7_4:1479966-1479985 | None:intergenic | 45.0% | |
| !!! | TTTTTAATAAAATAAAATTG+AGG | + | chr7_4:1480157-1480176 | Msa1134850:three_prime_UTR | 5.0% |
| GCATAGACACTCCTCGGATT+AGG | - | chr7_4:1475244-1475263 | None:intergenic | 50.0% | |
| GCCCGGAGATAAGTAAAGTC+TGG | - | chr7_4:1475448-1475467 | None:intergenic | 50.0% | |
| TGGTAATCCAAAGTTCGGCC+CGG | - | chr7_4:1475465-1475484 | None:intergenic | 50.0% | |
| GCTTTGCAGACTCAATGCGA+TGG | + | chr7_4:1475869-1475888 | Msa1134850:intron | 50.0% | |
| !! | AAAGGTACCTCCCCTCAGAT+CGG | - | chr7_4:1477062-1477081 | None:intergenic | 50.0% |
| GGACCATCCCTACCCTATTT+AGG | - | chr7_4:1477144-1477163 | None:intergenic | 50.0% | |
| CCTGAGACATAAGGCTTGTC+AGG | - | chr7_4:1477190-1477209 | None:intergenic | 50.0% | |
| ! | CCTGACAAGCCTTATGTCTC+AGG | + | chr7_4:1477187-1477206 | Msa1134850:intron | 50.0% |
| GCCTTATGTCTCAGGCCATA+TGG | + | chr7_4:1477195-1477214 | Msa1134850:intron | 50.0% | |
| AGTTTAGCCCATCGACCTTG+TGG | - | chr7_4:1477250-1477269 | None:intergenic | 50.0% | |
| TTTGCGAGAAGCTTGTCAGC+AGG | + | chr7_4:1477448-1477467 | Msa1134850:CDS | 50.0% | |
| !!! | CCTGCCTTTTTTGTTGGCGT+GGG | - | chr7_4:1477506-1477525 | None:intergenic | 50.0% |
| !!! | ACCTGCCTTTTTTGTTGGCG+TGG | - | chr7_4:1477507-1477526 | None:intergenic | 50.0% |
| GCGAAATAATGACCCTCGCA+GGG | - | chr7_4:1477537-1477556 | None:intergenic | 50.0% | |
| AGCGAAATAATGACCCTCGC+AGG | - | chr7_4:1477538-1477557 | None:intergenic | 50.0% | |
| TCATCCCTCACCTTACATGC+CGG | + | chr7_4:1478136-1478155 | Msa1134850:intron | 50.0% | |
| CTATTGGGTTACTCGAGCCA+GGG | + | chr7_4:1478234-1478253 | Msa1134850:intron | 50.0% | |
| AACACAGACACCTCATGTCC+TGG | - | chr7_4:1478271-1478290 | None:intergenic | 50.0% | |
| ! | CTCCCATGGATTGTCCAAAG+AGG | - | chr7_4:1478666-1478685 | None:intergenic | 50.0% |
| CTCTTTGGACAATCCATGGG+AGG | + | chr7_4:1478664-1478683 | Msa1134850:CDS | 50.0% | |
| TAAAGCAACAGCTCCTCCCA+TGG | - | chr7_4:1478680-1478699 | None:intergenic | 50.0% | |
| CAGATGACATGGTTCCTCCA+TGG | + | chr7_4:1478857-1478876 | Msa1134850:CDS | 50.0% | |
| ATCTGAGCTAGCAACCATGG+AGG | - | chr7_4:1478874-1478893 | None:intergenic | 50.0% | |
| CAATATCAGCCTCCCCATGA+AGG | - | chr7_4:1479860-1479879 | None:intergenic | 50.0% | |
| CGGACAACTCACCTAATCCG+AGG | + | chr7_4:1475230-1475249 | Msa1134850:intron | 55.0% | |
| CTTATCTCCGGGCCGAACTT+TGG | + | chr7_4:1475455-1475474 | Msa1134850:intron | 55.0% | |
| GGGCCGAACTTTGGATTACC+AGG | + | chr7_4:1475464-1475483 | Msa1134850:intron | 55.0% | |
| ! | GCTGGTTTCCTGAAACTGCC+AGG | + | chr7_4:1476076-1476095 | Msa1134850:CDS | 55.0% |
| GGTTTCCTGAAACTGCCAGG+CGG | + | chr7_4:1476079-1476098 | Msa1134850:CDS | 55.0% | |
| ! | TGAGTTGACCTCAGGGGAGT+CGG | + | chr7_4:1477028-1477047 | Msa1134850:intron | 55.0% |
| AGCCCATCGACCTTGTGGTA+AGG | - | chr7_4:1477245-1477264 | None:intergenic | 55.0% | |
| !! | ATAGTGGGCTTTCTGCTGCC+AGG | + | chr7_4:1477472-1477491 | Msa1134850:CDS | 55.0% |
| TTGGCGTGGGATGAAAGACC+TGG | - | chr7_4:1477493-1477512 | None:intergenic | 55.0% | |
| CCCACGCCAACAAAAAAGGC+AGG | + | chr7_4:1477503-1477522 | Msa1134850:CDS | 55.0% | |
| CAGGTTCATCAACCCTGCGA+GGG | + | chr7_4:1477522-1477541 | Msa1134850:CDS | 55.0% | |
| !! | CTTCTAGAGTGCTCAGCCCT+GGG | + | chr7_4:1477556-1477575 | Msa1134850:CDS | 55.0% |
| CGGATGTACTGGACATTGGC+AGG | - | chr7_4:1477674-1477693 | None:intergenic | 55.0% | |
| GGCACGGATGTACTGGACAT+TGG | - | chr7_4:1477678-1477697 | None:intergenic | 55.0% | |
| ATGTCCAGTACATCCGTGCC+AGG | + | chr7_4:1477678-1477697 | Msa1134850:intron | 55.0% | |
| GCTATTGGGTTACTCGAGCC+AGG | + | chr7_4:1478233-1478252 | Msa1134850:intron | 55.0% | |
| CTTGTCCAGTCCAGGACATG+AGG | + | chr7_4:1478258-1478277 | Msa1134850:intron | 55.0% | |
| AGACACCTCATGTCCTGGAC+TGG | - | chr7_4:1478266-1478285 | None:intergenic | 55.0% | |
| GCAGGTTCATCAACCCTGCG+AGG | + | chr7_4:1477521-1477540 | Msa1134850:CDS | 60.0% | |
| !! | GCTTCTAGAGTGCTCAGCCC+TGG | + | chr7_4:1477555-1477574 | Msa1134850:CDS | 60.0% |
| CAAGCCTGGCACGGATGTAC+TGG | - | chr7_4:1477685-1477704 | None:intergenic | 60.0% | |
| CAGTACATCCGTGCCAGGCT+TGG | + | chr7_4:1477683-1477702 | Msa1134850:intron | 60.0% | |
| CTAATCGGCCAAGCCTGGCA+CGG | - | chr7_4:1477694-1477713 | None:intergenic | 60.0% | |
| GTGTGCTAATCGGCCAAGCC+TGG | - | chr7_4:1477699-1477718 | None:intergenic | 60.0% | |
| ! | TCCTGGACTGGACAAGACCC+TGG | - | chr7_4:1478254-1478273 | None:intergenic | 60.0% |
| ATGGCGCCATCCCATGCCTT+AGG | - | chr7_4:1478721-1478740 | None:intergenic | 60.0% | |
| TTCGGCCGCCTGGCAGTTTC+AGG | - | chr7_4:1476087-1476106 | None:intergenic | 65.0% | |
| GTTGACCTCAGGGGAGTCGG+TGG | + | chr7_4:1477031-1477050 | Msa1134850:intron | 65.0% | |
| !! | TCGGTGGTGGTGCCGATCTG+AGG | + | chr7_4:1477047-1477066 | Msa1134850:intron | 65.0% |
| !! | CGGTGGTGGTGCCGATCTGA+GGG | + | chr7_4:1477048-1477067 | Msa1134850:intron | 65.0% |
| !! | GGTGGTGGTGCCGATCTGAG+GGG | + | chr7_4:1477049-1477068 | Msa1134850:intron | 65.0% |
| ! | GCCAGGGTCTTGTCCAGTCC+AGG | + | chr7_4:1478250-1478269 | Msa1134850:intron | 65.0% |
| TCGACGGCAGTCCACAACCG+CGG | - | chr7_4:1479267-1479286 | None:intergenic | 65.0% | |
| ! | CACAGCTGCTTTCGGCCGCC+TGG | - | chr7_4:1476097-1476116 | None:intergenic | 70.0% |
| GACCTCAGGGGAGTCGGTGG+TGG | + | chr7_4:1477034-1477053 | Msa1134850:intron | 70.0% | |
| !! | CACCACCACCGACTCCCCTG+AGG | - | chr7_4:1477039-1477058 | None:intergenic | 70.0% |
| !! | GGTGGTGCCGATCTGAGGGG+AGG | + | chr7_4:1477052-1477071 | Msa1134850:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 1474565 | 1480220 | 1474565 | ID=Msa1134850;Name=Msa1134850 |
| chr7_4 | mRNA | 1474565 | 1480220 | 1474565 | ID=Msa1134850-mRNA-1;Parent=Msa1134850;Name=Msa1134850-mRNA-1;_AED=0.18;_eAED=0.18;_QI=215|0.77|0.9|0.9|0.88|0.8|10|306|391 |
| chr7_4 | exon | 1474565 | 1474736 | 1474565 | ID=Msa1134850-mRNA-1:exon:523;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1474855 | 1475035 | 1474855 | ID=Msa1134850-mRNA-1:exon:524;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1475878 | 1475907 | 1475878 | ID=Msa1134850-mRNA-1:exon:525;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1476033 | 1476162 | 1476033 | ID=Msa1134850-mRNA-1:exon:526;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1476269 | 1476415 | 1476269 | ID=Msa1134850-mRNA-1:exon:527;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1477400 | 1477684 | 1477400 | ID=Msa1134850-mRNA-1:exon:528;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1478632 | 1478762 | 1478632 | ID=Msa1134850-mRNA-1:exon:529;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1478853 | 1478990 | 1478853 | ID=Msa1134850-mRNA-1:exon:530;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1479231 | 1479329 | 1479231 | ID=Msa1134850-mRNA-1:exon:531;Parent=Msa1134850-mRNA-1 |
| chr7_4 | exon | 1479837 | 1480220 | 1479837 | ID=Msa1134850-mRNA-1:exon:532;Parent=Msa1134850-mRNA-1 |
| chr7_4 | five_prime_UTR | 1474565 | 1474736 | 1474565 | ID=Msa1134850-mRNA-1:five_prime_utr;Parent=Msa1134850-mRNA-1 |
| chr7_4 | five_prime_UTR | 1474855 | 1474897 | 1474855 | ID=Msa1134850-mRNA-1:five_prime_utr;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1474898 | 1475035 | 1474898 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1475878 | 1475907 | 1475878 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1476033 | 1476162 | 1476033 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1476269 | 1476415 | 1476269 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1477400 | 1477684 | 1477400 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1478632 | 1478762 | 1478632 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1478853 | 1478990 | 1478853 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1479231 | 1479329 | 1479231 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | CDS | 1479837 | 1479914 | 1479837 | ID=Msa1134850-mRNA-1:cds;Parent=Msa1134850-mRNA-1 |
| chr7_4 | three_prime_UTR | 1479915 | 1480220 | 1479915 | ID=Msa1134850-mRNA-1:three_prime_utr;Parent=Msa1134850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
