Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149380 | XP_013449904.1 | 95.272 | 423 | 7 | 2 | 1 | 411 | 1 | 422 | 0.0 | 814 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149380 | sp|Q9LNC6|TOL2_ARATH | 52.406 | 374 | 158 | 5 | 1 | 367 | 1 | 361 | 1.42e-121 | 360 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149380 | A0A072U2J4 | 95.272 | 423 | 7 | 2 | 1 | 411 | 1 | 422 | 0.0 | 814 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0604290 | Msa1149380 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0610130 | Msa1149380 | 0.819501 | 1.123798e-52 | -8.615850e-47 |
| Msa0610180 | Msa1149380 | 0.815668 | 8.215105e-52 | -8.615850e-47 |
| Msa0672550 | Msa1149380 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0703910 | Msa1149380 | 0.818964 | 1.489196e-52 | -8.615850e-47 |
| Msa0750850 | Msa1149380 | 0.817311 | 3.522473e-52 | -8.615850e-47 |
| Msa0148080 | Msa1149380 | 0.815223 | 1.032257e-51 | -8.615850e-47 |
| Msa0167980 | Msa1149380 | 0.800086 | 1.699339e-48 | -8.615850e-47 |
| Msa0233370 | Msa1149380 | 0.806318 | 8.718375e-50 | -8.615850e-47 |
| Msa0385490 | Msa1149380 | 0.827107 | 1.878052e-54 | -8.615850e-47 |
| Msa0992580 | Msa1149380 | 0.805165 | 1.523106e-49 | -8.615850e-47 |
| Msa0994370 | Msa1149380 | 0.810742 | 9.908767e-51 | -8.615850e-47 |
| Msa1036800 | Msa1149380 | 0.990979 | 2.821116e-185 | -8.615850e-47 |
| Msa1071320 | Msa1149380 | 0.821325 | 4.288280e-53 | -8.615850e-47 |
| Msa0257500 | Msa1149380 | 0.818827 | 1.599575e-52 | -8.615850e-47 |
| Msa0321690 | Msa1149380 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa1149380 | Msa1231840 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
| Msa1149380 | Msa1270660 | 0.804521 | 2.075956e-49 | -8.615850e-47 |
| Msa1149380 | Msa1307180 | 0.821477 | 3.954658e-53 | -8.615850e-47 |
| Msa1149380 | Msa1316360 | 0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa1149380 | Msa1346840 | 0.823172 | 1.597929e-53 | -8.615850e-47 |
| Msa1149380 | Msa1440790 | 0.809689 | 1.671667e-50 | -8.615850e-47 |
| Msa0518170 | Msa1149380 | 0.805739 | 1.154290e-49 | -8.615850e-47 |
| Msa0527540 | Msa1149380 | 0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0542560 | Msa1149380 | 0.803091 | 4.112156e-49 | -8.615850e-47 |
| Msa0861470 | Msa1149380 | 0.802734 | 4.874977e-49 | -8.615850e-47 |
| Msa0861570 | Msa1149380 | 0.817219 | 3.694300e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149380 | MtrunA17_Chr7g0261361 | 95.272 | 423 | 7 | 2 | 1 | 411 | 1 | 422 | 0.0 | 814 |
| Msa1149380 | MtrunA17_Chr5g0395341 | 37.637 | 364 | 195 | 7 | 5 | 352 | 8 | 355 | 1.09e-69 | 225 |
| Msa1149380 | MtrunA17_Chr4g0039841 | 40.248 | 323 | 174 | 7 | 3 | 311 | 33 | 350 | 4.53e-55 | 188 |
| Msa1149380 | MtrunA17_Chr8g0388361 | 95.385 | 65 | 3 | 0 | 57 | 121 | 1 | 65 | 5.45e-38 | 131 |
| Msa1149380 | MtrunA17_Chr7g0244381 | 26.144 | 306 | 204 | 8 | 43 | 342 | 15 | 304 | 1.70e-23 | 103 |
| Msa1149380 | MtrunA17_Chr3g0139891 | 28.750 | 320 | 182 | 13 | 41 | 341 | 5 | 297 | 2.02e-22 | 99.8 |
| Msa1149380 | MtrunA17_Chr1g0157701 | 26.230 | 366 | 217 | 14 | 41 | 382 | 5 | 341 | 7.07e-22 | 98.2 |
| Msa1149380 | MtrunA17_Chr3g0125541 | 29.167 | 288 | 178 | 10 | 43 | 323 | 10 | 278 | 3.48e-21 | 95.5 |
| Msa1149380 | MtrunA17_Chr3g0131021 | 23.427 | 286 | 193 | 9 | 39 | 317 | 3 | 269 | 2.06e-14 | 74.7 |
| Msa1149380 | MtrunA17_Chr8g0385261 | 23.793 | 290 | 187 | 10 | 39 | 316 | 3 | 270 | 3.86e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1149380 | AT1G06210.1 | 52.406 | 374 | 158 | 5 | 1 | 367 | 1 | 361 | 1.45e-122 | 360 |
| Msa1149380 | AT1G06210.2 | 56.537 | 283 | 100 | 5 | 1 | 269 | 1 | 274 | 3.69e-98 | 294 |
| Msa1149380 | AT5G16880.4 | 41.509 | 318 | 162 | 5 | 5 | 310 | 8 | 313 | 2.28e-74 | 238 |
| Msa1149380 | AT5G16880.1 | 41.509 | 318 | 162 | 5 | 5 | 310 | 8 | 313 | 2.28e-74 | 238 |
| Msa1149380 | AT5G16880.2 | 41.509 | 318 | 162 | 5 | 5 | 310 | 8 | 313 | 2.28e-74 | 238 |
| Msa1149380 | AT5G16880.3 | 40.909 | 308 | 142 | 8 | 5 | 293 | 8 | 294 | 3.09e-66 | 213 |
| Msa1149380 | AT4G32760.3 | 28.826 | 281 | 170 | 10 | 41 | 310 | 5 | 266 | 6.77e-23 | 100 |
| Msa1149380 | AT4G32760.2 | 28.826 | 281 | 170 | 10 | 41 | 310 | 5 | 266 | 1.32e-22 | 100 |
| Msa1149380 | AT4G32760.1 | 28.826 | 281 | 170 | 10 | 41 | 310 | 5 | 266 | 1.42e-22 | 100 |
| Msa1149380 | AT1G21380.1 | 27.106 | 273 | 176 | 8 | 43 | 309 | 10 | 265 | 8.78e-22 | 97.8 |
| Msa1149380 | AT5G01760.1 | 26.855 | 283 | 182 | 8 | 42 | 315 | 26 | 292 | 3.48e-21 | 96.3 |
| Msa1149380 | AT1G76970.2 | 26.740 | 273 | 171 | 8 | 43 | 310 | 10 | 258 | 1.20e-20 | 94.0 |
| Msa1149380 | AT1G76970.3 | 26.740 | 273 | 171 | 8 | 43 | 310 | 10 | 258 | 1.20e-20 | 94.0 |
| Msa1149380 | AT1G76970.6 | 26.740 | 273 | 171 | 8 | 43 | 310 | 10 | 258 | 1.20e-20 | 94.0 |
| Msa1149380 | AT1G76970.1 | 26.740 | 273 | 171 | 8 | 43 | 310 | 10 | 258 | 1.20e-20 | 94.0 |
| Msa1149380 | AT3G08790.1 | 28.214 | 280 | 178 | 9 | 41 | 315 | 5 | 266 | 1.47e-19 | 91.3 |
| Msa1149380 | AT5G63640.1 | 23.292 | 322 | 207 | 10 | 39 | 342 | 3 | 302 | 1.69e-16 | 81.6 |
| Msa1149380 | AT5G63640.2 | 23.292 | 322 | 207 | 10 | 39 | 342 | 3 | 302 | 1.69e-16 | 81.6 |
| Msa1149380 | AT2G38410.1 | 23.607 | 305 | 194 | 9 | 43 | 310 | 13 | 315 | 6.13e-16 | 80.5 |
| Msa1149380 | AT1G76970.7 | 25.573 | 262 | 161 | 9 | 74 | 330 | 15 | 247 | 8.69e-13 | 70.1 |
| Msa1149380 | AT1G76970.4 | 25.573 | 262 | 161 | 9 | 74 | 330 | 15 | 247 | 8.69e-13 | 70.1 |
Find 111 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGAACTGGGTATCTTTC+AGG | 0.073874 | 7_4:-30632243 | None:intergenic |
| AAACATTATCTGAACCAAAT+TGG | 0.209591 | 7_4:+30629668 | Msa1149380:CDS |
| TTTCGTGCTATCCACTATTT+TGG | 0.212900 | 7_4:-30633287 | None:intergenic |
| AACCTATAGTTCCTTCTATA+AGG | 0.217376 | 7_4:+30633436 | Msa1149380:three_prime_UTR |
| TGTTGCTTCGTCGACCATTT+TGG | 0.217475 | 7_4:-30629641 | None:intergenic |
| TAAACTCTTCGGCGTTAATA+AGG | 0.243065 | 7_4:-30629714 | None:intergenic |
| CTGAGATTCATGCCCCAATT+TGG | 0.268510 | 7_4:-30629682 | None:intergenic |
| AAGTTTACCTTTAAAGGTTT+TGG | 0.279646 | 7_4:-30632414 | None:intergenic |
| GGCAGAGCCAAAACCTTTAA+AGG | 0.284783 | 7_4:+30632407 | Msa1149380:CDS |
| AACATTATCTGAACCAAATT+GGG | 0.287314 | 7_4:+30629669 | Msa1149380:CDS |
| TGAGAAGGTTCTTGATGATA+TGG | 0.294087 | 7_4:+30629867 | Msa1149380:CDS |
| TCGGCTCATGTTGGCGCTGC+TGG | 0.319679 | 7_4:-30629569 | None:intergenic |
| GTTAGTGAAGGTTATGTTAT+GGG | 0.320735 | 7_4:-30629462 | None:intergenic |
| TATTACACGCCTACACAATA+TGG | 0.323040 | 7_4:-30633408 | None:intergenic |
| TGTAGCCCTGCTTCTGGAAC+TGG | 0.326880 | 7_4:-30632255 | None:intergenic |
| ATCACCTTCACGCCTTTCAC+TGG | 0.326939 | 7_4:-30633152 | None:intergenic |
| AGCTTCCACTTCACGCCTTT+CGG | 0.333758 | 7_4:-30633119 | None:intergenic |
| TAGGTTGATTGAGAATAATC+AGG | 0.339682 | 7_4:+30629891 | Msa1149380:CDS |
| AGAGCATGTAGCCCTGCTTC+TGG | 0.342170 | 7_4:-30632261 | None:intergenic |
| TGGATTCAGGTGTTGGTGTT+TGG | 0.344888 | 7_4:-30629621 | None:intergenic |
| GAAACATAGTCTTGATTTGT+TGG | 0.357292 | 7_4:+30629798 | Msa1149380:CDS |
| ACACCATTCGAATCCGATCT+AGG | 0.360563 | 7_4:+30629487 | Msa1149380:five_prime_UTR |
| TTCTTCTCTTCAGCTGATGC+TGG | 0.370248 | 7_4:-30632324 | None:intergenic |
| TAGGGCTTGGGGTGAGTCTC+AGG | 0.372522 | 7_4:+30629951 | Msa1149380:CDS |
| AGATTTAACTTTGAGTCTGC+TGG | 0.388877 | 7_4:+30632892 | Msa1149380:CDS |
| CTGGAACTGGGTATCTTTCA+GGG | 0.403076 | 7_4:-30632242 | None:intergenic |
| AAGTGTCTCTTCGTCATTTG+CGG | 0.424585 | 7_4:-30632963 | None:intergenic |
| ACCTATAGTTCCTTCTATAA+GGG | 0.426947 | 7_4:+30633437 | Msa1149380:three_prime_UTR |
| AAGTGCTTATCAACATCCTT+TGG | 0.427379 | 7_4:+30632215 | Msa1149380:CDS |
| GATATAATCACCCTTATAGA+AGG | 0.427823 | 7_4:-30633447 | None:intergenic |
| GCAATCACTCTTTCTTATCA+AGG | 0.428442 | 7_4:+30632925 | Msa1149380:CDS |
| TTCAGAACCGTTAAACTCTT+CGG | 0.431789 | 7_4:-30629725 | None:intergenic |
| TCACCTTCACGCCTTTCACT+GGG | 0.442488 | 7_4:-30633151 | None:intergenic |
| AGACTATGTTTCTGAACAAC+AGG | 0.445577 | 7_4:-30629787 | None:intergenic |
| ACCAACACCTGAATCCAAAA+TGG | 0.446625 | 7_4:+30629627 | Msa1149380:CDS |
| GAGAATAATCAGGGTGATGG+TGG | 0.448384 | 7_4:+30629901 | Msa1149380:CDS |
| AGGTTCTTGATGATATGGTT+AGG | 0.452679 | 7_4:+30629872 | Msa1149380:CDS |
| AGCAGCTTCTGACAGCTCTT+CGG | 0.454162 | 7_4:-30633179 | None:intergenic |
| GCAGTTGGTTTCTAAGTATG+AGG | 0.459831 | 7_4:+30633018 | Msa1149380:CDS |
| GACTCTGAGGCATACGGAAT+AGG | 0.460079 | 7_4:-30632192 | None:intergenic |
| ATTAACGCCGAAGAGTTTAA+CGG | 0.462205 | 7_4:+30629718 | Msa1149380:CDS |
| TCCACTTCACGCCTTTCGGA+AGG | 0.464569 | 7_4:-30633115 | None:intergenic |
| TCATGTTGAAACCAAAATAG+TGG | 0.465440 | 7_4:+30633276 | Msa1149380:CDS |
| TGTTAGTGAAGGTTATGTTA+TGG | 0.469604 | 7_4:-30629463 | None:intergenic |
| CTTTCTTATCAAGGAGATTG+TGG | 0.471308 | 7_4:+30632934 | Msa1149380:CDS |
| ATATAAGTCTGACTGAAAAC+AGG | 0.472919 | 7_4:-30629988 | None:intergenic |
| AGGGTTTCTGTCTGACTCCA+TGG | 0.475349 | 7_4:+30629507 | Msa1149380:exon |
| TGGAACTGGGTATCTTTCAG+GGG | 0.477292 | 7_4:-30632241 | None:intergenic |
| GGTTTCTAAGTATGAGGAGT+TGG | 0.477710 | 7_4:+30633024 | Msa1149380:CDS |
| CTCATTCGGTATTAGTCTTG+AGG | 0.480612 | 7_4:-30633330 | None:intergenic |
| GGATTAAATATCACAATCCT+CGG | 0.483495 | 7_4:-30633470 | None:intergenic |
| AGATACCCAGTTCCAGAAGC+AGG | 0.487684 | 7_4:+30632249 | Msa1149380:CDS |
| AAATCAAAGCTAGCTCAATT+CGG | 0.491882 | 7_4:+30629532 | Msa1149380:CDS |
| TCTCTTCAGCTGATGCTGGT+TGG | 0.495094 | 7_4:-30632320 | None:intergenic |
| TTCTGAAATTGCTTCTGAGA+AGG | 0.500375 | 7_4:+30629852 | Msa1149380:CDS |
| GACTCGTTTATCTGAGGAAG+AGG | 0.501929 | 7_4:-30633561 | None:intergenic |
| CGAATGGTGTTTGTTAGTGA+AGG | 0.501952 | 7_4:-30629474 | None:intergenic |
| ACCCTTATAGAAGGAACTAT+AGG | 0.503546 | 7_4:-30633438 | None:intergenic |
| CCACTTCACGCCTTTCGGAA+GGG | 0.507110 | 7_4:-30633114 | None:intergenic |
| TTTCAGTTGATTAGGGCTTG+GGG | 0.512504 | 7_4:+30629940 | Msa1149380:CDS |
| CACCATTCGAATCCGATCTA+GGG | 0.514973 | 7_4:+30629488 | Msa1149380:five_prime_UTR |
| AGCTAGCTTTGATTTGTCCA+TGG | 0.517070 | 7_4:-30629524 | None:intergenic |
| ATTACAGAGTTTGAAAGGAA+GGG | 0.518353 | 7_4:+30632134 | Msa1149380:intron |
| CATTGATTACAGAGTTTGAA+AGG | 0.519722 | 7_4:+30632129 | Msa1149380:intron |
| AGGGCTACATGCTCTTGCTC+TGG | 0.521165 | 7_4:+30632269 | Msa1149380:CDS |
| GATTACAGAGTTTGAAAGGA+AGG | 0.525440 | 7_4:+30632133 | Msa1149380:intron |
| CAATGATGAGCTGCAGCAGT+TGG | 0.526001 | 7_4:+30633003 | Msa1149380:CDS |
| TTACAGAGTTTGAAAGGAAG+GGG | 0.533707 | 7_4:+30632135 | Msa1149380:intron |
| TCGGTATTAGTCTTGAGGCT+AGG | 0.535376 | 7_4:-30633325 | None:intergenic |
| GTAGCCCTGCTTCTGGAACT+GGG | 0.539444 | 7_4:-30632254 | None:intergenic |
| CCCTTCCGAAAGGCGTGAAG+TGG | 0.547349 | 7_4:+30633114 | Msa1149380:CDS |
| AATGGTCGACGAAGCAACAT+CGG | 0.555458 | 7_4:+30629645 | Msa1149380:CDS |
| GTGATGGTGGGAATAGAAGA+AGG | 0.556106 | 7_4:+30629914 | Msa1149380:CDS |
| AGGTTGATTGAGAATAATCA+GGG | 0.556748 | 7_4:+30629892 | Msa1149380:CDS |
| AGAATAATCAGGGTGATGGT+GGG | 0.559331 | 7_4:+30629902 | Msa1149380:CDS |
| GCACAAAGTGTTGACACTGC+AGG | 0.562346 | 7_4:+30633067 | Msa1149380:CDS |
| GATTAAATATCACAATCCTC+GGG | 0.564206 | 7_4:-30633469 | None:intergenic |
| CACAAAGTGTTGACACTGCA+GGG | 0.565100 | 7_4:+30633068 | Msa1149380:CDS |
| GCACTTGACTCTGAGGCATA+CGG | 0.567301 | 7_4:-30632198 | None:intergenic |
| CTGTTCAAAACCCCAGTGAA+AGG | 0.574003 | 7_4:+30633140 | Msa1149380:CDS |
| GTCCCTGTTGATGCAACCGA+GGG | 0.574251 | 7_4:+30633247 | Msa1149380:CDS |
| AGCTAGCTCAATTCGGTGAG+AGG | 0.574332 | 7_4:+30629539 | Msa1149380:CDS |
| TGTTGCTGTCCATATTGTGT+AGG | 0.576162 | 7_4:+30633399 | Msa1149380:three_prime_UTR |
| GAATCACTTGACATGACGAC+AGG | 0.581911 | 7_4:+30632159 | Msa1149380:CDS |
| ATTGAGAATAATCAGGGTGA+TGG | 0.587995 | 7_4:+30629898 | Msa1149380:CDS |
| TCTGAGGCATACGGAATAGG+TGG | 0.600817 | 7_4:-30632189 | None:intergenic |
| GGAACTGGGTATCTTTCAGG+GGG | 0.603356 | 7_4:-30632240 | None:intergenic |
| AGTTCATCATAATGTTAATG+TGG | 0.605472 | 7_4:+30633508 | Msa1149380:three_prime_UTR |
| GTCAGACAGAAACCCTAGAT+CGG | 0.608500 | 7_4:-30629500 | None:intergenic |
| CTCTAGCATATTAAATTCTG+AGG | 0.609799 | 7_4:+30632386 | Msa1149380:CDS |
| TTGATAAGCACTTGACTCTG+AGG | 0.611483 | 7_4:-30632205 | None:intergenic |
| AACCCCAGTGAAAGGCGTGA+AGG | 0.616642 | 7_4:+30633148 | Msa1149380:CDS |
| GCTTACGATTCGGCTCATGT+TGG | 0.617537 | 7_4:-30629578 | None:intergenic |
| CACCTTCACGCCTTTCACTG+GGG | 0.622736 | 7_4:-30633150 | None:intergenic |
| GGAAGCTTCTCAAAGTTCAG+AGG | 0.623281 | 7_4:+30633045 | Msa1149380:CDS |
| TGATGGTGGGAATAGAAGAA+GGG | 0.626796 | 7_4:+30629915 | Msa1149380:CDS |
| TGCCATGACTCGTTTATCTG+AGG | 0.627116 | 7_4:-30633567 | None:intergenic |
| AACATGAGCCGAATCGTAAG+CGG | 0.628012 | 7_4:+30629580 | Msa1149380:CDS |
| GATACCCAGTTCCAGAAGCA+GGG | 0.631013 | 7_4:+30632250 | Msa1149380:CDS |
| ATACCGAATGAGAAAAGCGA+AGG | 0.631923 | 7_4:+30633341 | Msa1149380:exon |
| AACCCTAGATCGGATTCGAA+TGG | 0.634318 | 7_4:-30629490 | None:intergenic |
| CTGTTCAAAACCCTTCCGAA+AGG | 0.645153 | 7_4:+30633104 | Msa1149380:CDS |
| CCCTGTTGATGCAACCGAGG+GGG | 0.645872 | 7_4:+30633249 | Msa1149380:CDS |
| ACATTATCTGAACCAAATTG+GGG | 0.646003 | 7_4:+30629670 | Msa1149380:CDS |
| AGTCCCTGTTGATGCAACCG+AGG | 0.662599 | 7_4:+30633246 | Msa1149380:CDS |
| ATAAGGGTGATTATATCCCG+AGG | 0.666087 | 7_4:+30633453 | Msa1149380:three_prime_UTR |
| GGCATGAATCTCAGAATCTG+CGG | 0.695779 | 7_4:+30629691 | Msa1149380:CDS |
| TGAACTACAATAATCTCACA+AGG | 0.707193 | 7_4:-30633491 | None:intergenic |
| TCCCTGTTGATGCAACCGAG+GGG | 0.709087 | 7_4:+30633248 | Msa1149380:CDS |
| TGACACTGCAGGGCATGATG+CGG | 0.709885 | 7_4:+30633078 | Msa1149380:CDS |
| AGAGAAGAAAGAGCATCTTG+TGG | 0.719443 | 7_4:+30632338 | Msa1149380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTACTTTTAATCTTAAA+AGG | + | chr7_4:30631358-30631377 | Msa1149380:intron | 10.0% |
| !!! | ATAATTTTTTTTTTTTGTAG+TGG | + | chr7_4:30632652-30632671 | Msa1149380:intron | 10.0% |
| !!! | TTTATTGGTTAAAATTCAAA+TGG | + | chr7_4:30630251-30630270 | Msa1149380:intron | 15.0% |
| !!! | TTATTGGTTAAAATTCAAAT+GGG | + | chr7_4:30630252-30630271 | Msa1149380:intron | 15.0% |
| !!! | TTGAAAGTTGAAATTTTTAT+AGG | - | chr7_4:30630299-30630318 | None:intergenic | 15.0% |
| !!! | AATTTTAACATCCTTAATAA+GGG | - | chr7_4:30630587-30630606 | None:intergenic | 15.0% |
| !!! | TAATTTTAACATCCTTAATA+AGG | - | chr7_4:30630588-30630607 | None:intergenic | 15.0% |
| !! | TAAGGATGTTAAAATTAATT+TGG | + | chr7_4:30630591-30630610 | Msa1149380:intron | 15.0% |
| !! | TTTATATCTATCTACTTATT+AGG | + | chr7_4:30630773-30630792 | Msa1149380:intron | 15.0% |
| !! | ATGGTAAAATAAAAAATAGA+AGG | - | chr7_4:30632050-30632069 | None:intergenic | 15.0% |
| !! | TAGGAAAAAATATATTATTG+TGG | - | chr7_4:30632840-30632859 | None:intergenic | 15.0% |
| !! | AAATTATTGTACTTTCTATT+AGG | - | chr7_4:30632859-30632878 | None:intergenic | 15.0% |
| !!! | AATTTCAACTTTCAAGTAAT+AGG | + | chr7_4:30630304-30630323 | Msa1149380:intron | 20.0% |
| !! | TATATAGAATTCATCTTAGT+AGG | + | chr7_4:30630452-30630471 | Msa1149380:intron | 20.0% |
| !! | AAAACCATTGAAAATTGAAA+TGG | - | chr7_4:30630725-30630744 | None:intergenic | 20.0% |
| !!! | TGTTTAGACATTTTTGTTTT+TGG | + | chr7_4:30630744-30630763 | Msa1149380:intron | 20.0% |
| !! | ATTAGGAATAAAAGATAGTT+GGG | - | chr7_4:30631208-30631227 | None:intergenic | 20.0% |
| !! | AATTAGGAATAAAAGATAGT+TGG | - | chr7_4:30631209-30631228 | None:intergenic | 20.0% |
| !!! | TTTCTTCATTACTTTTATGA+TGG | + | chr7_4:30631457-30631476 | Msa1149380:intron | 20.0% |
| !!! | TTCTTCATTACTTTTATGAT+GGG | + | chr7_4:30631458-30631477 | Msa1149380:intron | 20.0% |
| !!! | TTTCTTCATTACTTTTATGA+TGG | + | chr7_4:30631457-30631476 | Msa1149380:intron | 20.0% |
| !!! | ACCTATGTTATTTGAATTAT+GGG | - | chr7_4:30631804-30631823 | None:intergenic | 20.0% |
| !! | ATGTAAAAATATCATTTACC+AGG | + | chr7_4:30631939-30631958 | Msa1149380:intron | 20.0% |
| !! | TGTATGATTCAAATTAATAG+CGG | - | chr7_4:30632099-30632118 | None:intergenic | 20.0% |
| !! | TCAAAAAAGTTTACCTTTAA+AGG | - | chr7_4:30632423-30632442 | None:intergenic | 20.0% |
| !! | AAAAATATTCAGCATAAGAA+TGG | - | chr7_4:30632561-30632580 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATCTCTTATCCA+AGG | + | chr7_4:30632583-30632602 | Msa1149380:intron | 20.0% |
| !!! | TTTTTTTTTTTTGTAGTGGT+CGG | + | chr7_4:30632656-30632675 | Msa1149380:intron | 20.0% |
| !!! | ACCTTGCATATATATATTTT+TGG | + | chr7_4:30632693-30632712 | Msa1149380:intron | 20.0% |
| !!! | CCTTGCATATATATATTTTT+GGG | + | chr7_4:30632694-30632713 | Msa1149380:intron | 20.0% |
| !! | TAAATAGATCTCAATTATCT+CGG | - | chr7_4:30632761-30632780 | None:intergenic | 20.0% |
| !! | GATCATTAATTATTTGATCA+GGG | - | chr7_4:30632798-30632817 | None:intergenic | 20.0% |
| !! | TGATCATTAATTATTTGATC+AGG | - | chr7_4:30632799-30632818 | None:intergenic | 20.0% |
| !!! | TAGAAAGTACAATAATTTTG+TGG | + | chr7_4:30632861-30632880 | Msa1149380:intron | 20.0% |
| ! | AAACATTATCTGAACCAAAT+TGG | + | chr7_4:30629668-30629687 | Msa1149380:CDS | 25.0% |
| ! | AACATTATCTGAACCAAATT+GGG | + | chr7_4:30629669-30629688 | Msa1149380:CDS | 25.0% |
| !!! | TCTTTTGTTGTAACATTACA+TGG | + | chr7_4:30630161-30630180 | Msa1149380:intron | 25.0% |
| ! | TTTGAGTGTTACAATATGTT+AGG | + | chr7_4:30630187-30630206 | Msa1149380:intron | 25.0% |
| ! | TTAGGTTTATGAGTATGTAA+AGG | + | chr7_4:30630205-30630224 | Msa1149380:intron | 25.0% |
| ! | ATAAAAGAAACTATGTTGGT+GGG | - | chr7_4:30630236-30630255 | None:intergenic | 25.0% |
| ! | AATAAAAGAAACTATGTTGG+TGG | - | chr7_4:30630237-30630256 | None:intergenic | 25.0% |
| !! | ACCAACATAGTTTCTTTTAT+TGG | + | chr7_4:30630236-30630255 | Msa1149380:intron | 25.0% |
| ! | ACCAATAAAAGAAACTATGT+TGG | - | chr7_4:30630240-30630259 | None:intergenic | 25.0% |
| ! | GTAATAGGATAGAATATGAT+AGG | + | chr7_4:30630319-30630338 | Msa1149380:intron | 25.0% |
| !! | CAATCATATTTTGCATCTTT+AGG | + | chr7_4:30630552-30630571 | Msa1149380:intron | 25.0% |
| ! | ATCTACAAGACAAATCATAA+TGG | - | chr7_4:30630661-30630680 | None:intergenic | 25.0% |
| ! | ATTGAAAATTGAAATGGACA+TGG | - | chr7_4:30630719-30630738 | None:intergenic | 25.0% |
| !! | ATGTCCATTTCAATTTTCAA+TGG | + | chr7_4:30630718-30630737 | Msa1149380:intron | 25.0% |
| !!! | TATGAAGTTTTATTGGATGA+AGG | - | chr7_4:30630803-30630822 | None:intergenic | 25.0% |
| ! | TAAAACGAAAAAATGCCATA+TGG | - | chr7_4:30630928-30630947 | None:intergenic | 25.0% |
| ! | TTAAAAGAAAATTGACTGCA+TGG | - | chr7_4:30631316-30631335 | None:intergenic | 25.0% |
| ! | TTAATCTTAAAAGGCAATGT+TGG | + | chr7_4:30631367-30631386 | Msa1149380:intron | 25.0% |
| ! | TAAATCATAGTATTCGATCT+AGG | - | chr7_4:30631428-30631447 | None:intergenic | 25.0% |
| !! | TATTTTCATTTAGTCTACCT+AGG | + | chr7_4:30631408-30631427 | Msa1149380:intron | 25.0% |
| !!! | TTACTTTTATGATGGATTCA+AGG | + | chr7_4:30631620-30631639 | Msa1149380:intron | 25.0% |
| ! | ATATACCATTTCACTTTATC+TGG | + | chr7_4:30631729-30631748 | Msa1149380:intron | 25.0% |
| ! | ATTATGGGAGAGAAAATAAA+TGG | - | chr7_4:30631789-30631808 | None:intergenic | 25.0% |
| ! | TCCCATAATTCAAATAACAT+AGG | + | chr7_4:30631800-30631819 | Msa1149380:intron | 25.0% |
| !! | GACCTATGTTATTTGAATTA+TGG | - | chr7_4:30631805-30631824 | None:intergenic | 25.0% |
| !! | ATTTCAATCGAGTTTTTCTT+GGG | - | chr7_4:30631827-30631846 | None:intergenic | 25.0% |
| !! | AATTTCAATCGAGTTTTTCT+TGG | - | chr7_4:30631828-30631847 | None:intergenic | 25.0% |
| ! | AGAAAAACTCGATTGAAATT+TGG | + | chr7_4:30631828-30631847 | Msa1149380:intron | 25.0% |
| !!! | AAGTTTACCTTTAAAGGTTT+TGG | - | chr7_4:30632417-30632436 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTAAAGAAGTGC+TGG | + | chr7_4:30632437-30632456 | Msa1149380:intron | 25.0% |
| ! | AAAACAACAATTTATTGCTC+AGG | - | chr7_4:30632477-30632496 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTGTAGTGGTC+GGG | + | chr7_4:30632657-30632676 | Msa1149380:intron | 25.0% |
| ! | AAATATATATATGCAAGGTC+CGG | - | chr7_4:30632692-30632711 | None:intergenic | 25.0% |
| ! | CCCAAAAATATATATATGCA+AGG | - | chr7_4:30632697-30632716 | None:intergenic | 25.0% |
| !! | TACAATAATTTTGTGGTTGT+AGG | + | chr7_4:30632868-30632887 | Msa1149380:intron | 25.0% |
| ! | AGTTCATCATAATGTTAATG+TGG | + | chr7_4:30633508-30633527 | Msa1149380:three_prime_UTR | 25.0% |
| !!! | TCAAAATGAGAGCATTTTTA+AGG | - | chr7_4:30633540-30633559 | None:intergenic | 25.0% |
| AAAAATGGGAAAGTGATAAC+TGG | - | chr7_4:30629436-30629455 | None:intergenic | 30.0% | |
| GTTATGGGAATGTGAAAAAT+GGG | - | chr7_4:30629450-30629469 | None:intergenic | 30.0% | |
| TGTTATGGGAATGTGAAAAA+TGG | - | chr7_4:30629451-30629470 | None:intergenic | 30.0% | |
| GTTAGTGAAGGTTATGTTAT+GGG | - | chr7_4:30629465-30629484 | None:intergenic | 30.0% | |
| TGTTAGTGAAGGTTATGTTA+TGG | - | chr7_4:30629466-30629485 | None:intergenic | 30.0% | |
| AAATCAAAGCTAGCTCAATT+CGG | + | chr7_4:30629532-30629551 | Msa1149380:CDS | 30.0% | |
| ACATTATCTGAACCAAATTG+GGG | + | chr7_4:30629670-30629689 | Msa1149380:CDS | 30.0% | |
| !! | GAAACATAGTCTTGATTTGT+TGG | + | chr7_4:30629798-30629817 | Msa1149380:CDS | 30.0% |
| !! | TAGGTTGATTGAGAATAATC+AGG | + | chr7_4:30629891-30629910 | Msa1149380:CDS | 30.0% |
| ! | AGGTTGATTGAGAATAATCA+GGG | + | chr7_4:30629892-30629911 | Msa1149380:CDS | 30.0% |
| ATATAAGTCTGACTGAAAAC+AGG | - | chr7_4:30629991-30630010 | None:intergenic | 30.0% | |
| ! | TGTTTTCAGTCAGACTTATA+TGG | + | chr7_4:30629990-30630009 | Msa1149380:CDS | 30.0% |
| GGGTCTCATAAAATTATAGT+TGG | + | chr7_4:30630272-30630291 | Msa1149380:intron | 30.0% | |
| TTAGTTAGAACTATGATGAG+AGG | + | chr7_4:30630478-30630497 | Msa1149380:intron | 30.0% | |
| TAGTTAGAACTATGATGAGA+GGG | + | chr7_4:30630479-30630498 | Msa1149380:intron | 30.0% | |
| ! | TATTTTGCATCTTTAGGCTT+AGG | + | chr7_4:30630558-30630577 | Msa1149380:intron | 30.0% |
| TGGATCTATATAGCTACTAT+CGG | - | chr7_4:30630699-30630718 | None:intergenic | 30.0% | |
| CATCCAATAAAACTTCATAC+CGG | + | chr7_4:30630804-30630823 | Msa1149380:intron | 30.0% | |
| ATCCAATAAAACTTCATACC+GGG | + | chr7_4:30630805-30630824 | Msa1149380:intron | 30.0% | |
| TTCAAGACAAATAGAAATCC+CGG | - | chr7_4:30630826-30630845 | None:intergenic | 30.0% | |
| TATAACCAATCCCACTTAAT+GGG | - | chr7_4:30630989-30631008 | None:intergenic | 30.0% | |
| !! | ATTAAGTGGGATTGGTTATA+CGG | + | chr7_4:30630989-30631008 | Msa1149380:intron | 30.0% |
| AAAACTCAGTTCTTTCTTGT+TGG | + | chr7_4:30631072-30631091 | Msa1149380:intron | 30.0% | |
| AAACTCAGTTCTTTCTTGTT+GGG | + | chr7_4:30631073-30631092 | Msa1149380:intron | 30.0% | |
| GAAGATAGCTCAATAATTAG+AGG | - | chr7_4:30631126-30631145 | None:intergenic | 30.0% | |
| GTAAATATGACAGATCAAGA+TGG | - | chr7_4:30631148-30631167 | None:intergenic | 30.0% | |
| TTGATCTGTCATATTTACCA+AGG | + | chr7_4:30631150-30631169 | Msa1149380:intron | 30.0% | |
| ATACAAGACATGACAGAATT+AGG | - | chr7_4:30631225-30631244 | None:intergenic | 30.0% | |
| !!! | TTACTTTTATGATGGGTTCA+AGG | + | chr7_4:30631465-30631484 | Msa1149380:intron | 30.0% |
| CATAGTAAGATTTCCAACTT+TGG | + | chr7_4:30631508-30631527 | Msa1149380:intron | 30.0% | |
| TAAATCATAGTATTCGACCT+AGG | - | chr7_4:30631583-30631602 | None:intergenic | 30.0% | |
| CATAGTAAGATTTCCAACTT+TGG | + | chr7_4:30631508-30631527 | Msa1149380:intron | 30.0% | |
| ATCTATACATATCCTAAGAC+AGG | - | chr7_4:30631696-30631715 | None:intergenic | 30.0% | |
| TTAGACCAGATAAAGTGAAA+TGG | - | chr7_4:30631737-30631756 | None:intergenic | 30.0% | |
| TGGATAAGAAAATTTCATCG+AGG | + | chr7_4:30631848-30631867 | Msa1149380:intron | 30.0% | |
| ATAAGAAAATTTCATCGAGG+AGG | + | chr7_4:30631851-30631870 | Msa1149380:intron | 30.0% | |
| GATATCTTTCTACAGAATGT+TGG | + | chr7_4:30631971-30631990 | Msa1149380:intron | 30.0% | |
| !! | AAAATAGAAGGCGTCATATT+TGG | - | chr7_4:30632038-30632057 | None:intergenic | 30.0% |
| ! | AAATTAATAGCGGAGAGAAA+AGG | - | chr7_4:30632089-30632108 | None:intergenic | 30.0% |
| ! | CATTGATTACAGAGTTTGAA+AGG | + | chr7_4:30632129-30632148 | Msa1149380:intron | 30.0% |
| ATTACAGAGTTTGAAAGGAA+GGG | + | chr7_4:30632134-30632153 | Msa1149380:intron | 30.0% | |
| CTCTAGCATATTAAATTCTG+AGG | + | chr7_4:30632386-30632405 | Msa1149380:CDS | 30.0% | |
| AACTACTTCATGATGTTTCT+TGG | + | chr7_4:30632500-30632519 | Msa1149380:intron | 30.0% | |
| GATCCTGAAATCTATTAAAC+CGG | + | chr7_4:30632609-30632628 | Msa1149380:intron | 30.0% | |
| ! | ATCAAATTTGTTTCATCCTC+CGG | - | chr7_4:30632631-30632650 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTGTAGTGGTCG+GGG | + | chr7_4:30632658-30632677 | Msa1149380:intron | 30.0% |
| AATATATATATGCAAGGTCC+GGG | - | chr7_4:30632691-30632710 | None:intergenic | 30.0% | |
| TCATGTTGAAACCAAAATAG+TGG | + | chr7_4:30633276-30633295 | Msa1149380:CDS | 30.0% | |
| AACCTATAGTTCCTTCTATA+AGG | + | chr7_4:30633436-30633455 | Msa1149380:three_prime_UTR | 30.0% | |
| ACCTATAGTTCCTTCTATAA+GGG | + | chr7_4:30633437-30633456 | Msa1149380:three_prime_UTR | 30.0% | |
| GATATAATCACCCTTATAGA+AGG | - | chr7_4:30633450-30633469 | None:intergenic | 30.0% | |
| GATTAAATATCACAATCCTC+GGG | - | chr7_4:30633472-30633491 | None:intergenic | 30.0% | |
| GGATTAAATATCACAATCCT+CGG | - | chr7_4:30633473-30633492 | None:intergenic | 30.0% | |
| TGAACTACAATAATCTCACA+AGG | - | chr7_4:30633494-30633513 | None:intergenic | 30.0% | |
| TAAACTCTTCGGCGTTAATA+AGG | - | chr7_4:30629717-30629736 | None:intergenic | 35.0% | |
| ATTAACGCCGAAGAGTTTAA+CGG | + | chr7_4:30629718-30629737 | Msa1149380:CDS | 35.0% | |
| TTCAGAACCGTTAAACTCTT+CGG | - | chr7_4:30629728-30629747 | None:intergenic | 35.0% | |
| ! | AGACTATGTTTCTGAACAAC+AGG | - | chr7_4:30629790-30629809 | None:intergenic | 35.0% |
| !! | TTCTGAAATTGCTTCTGAGA+AGG | + | chr7_4:30629852-30629871 | Msa1149380:CDS | 35.0% |
| ! | TGAGAAGGTTCTTGATGATA+TGG | + | chr7_4:30629867-30629886 | Msa1149380:CDS | 35.0% |
| ! | AGGTTCTTGATGATATGGTT+AGG | + | chr7_4:30629872-30629891 | Msa1149380:CDS | 35.0% |
| ATTGAGAATAATCAGGGTGA+TGG | + | chr7_4:30629898-30629917 | Msa1149380:CDS | 35.0% | |
| ! | AAGGGCTTTTCAGTTGATTA+GGG | + | chr7_4:30629933-30629952 | Msa1149380:CDS | 35.0% |
| ! | TTTTCAGTTGATTAGGGCTT+GGG | + | chr7_4:30629939-30629958 | Msa1149380:CDS | 35.0% |
| GAAAAACAAAGCAAGAAGGA+AGG | - | chr7_4:30630039-30630058 | None:intergenic | 35.0% | |
| GTCTGAAAAACAAAGCAAGA+AGG | - | chr7_4:30630043-30630062 | None:intergenic | 35.0% | |
| CACTGACACTTCTAATTGAA+GGG | - | chr7_4:30630132-30630151 | None:intergenic | 35.0% | |
| ACCAATTATGGGTCTATTGT+AGG | + | chr7_4:30630529-30630548 | Msa1149380:intron | 35.0% | |
| ATATAGCTACTATCGGTACT+TGG | - | chr7_4:30630692-30630711 | None:intergenic | 35.0% | |
| !! | ATCCCGGTATGAAGTTTTAT+TGG | - | chr7_4:30630810-30630829 | None:intergenic | 35.0% |
| CGAAAAAATGCCATATGGTA+CGG | - | chr7_4:30630923-30630942 | None:intergenic | 35.0% | |
| ! | GGAAAGGCTTTGATTGTTAT+TGG | - | chr7_4:30630968-30630987 | None:intergenic | 35.0% |
| GTATAACCAATCCCACTTAA+TGG | - | chr7_4:30630990-30631009 | None:intergenic | 35.0% | |
| !! | AAGATAGTTGGGTCTTATTG+TGG | - | chr7_4:30631197-30631216 | None:intergenic | 35.0% |
| ACCAGCAATGAAAACATGTT+CGG | - | chr7_4:30631286-30631305 | None:intergenic | 35.0% | |
| TTCTGTAGAAAGATATCCCA+AGG | - | chr7_4:30631968-30631987 | None:intergenic | 35.0% | |
| GATTACAGAGTTTGAAAGGA+AGG | + | chr7_4:30632133-30632152 | Msa1149380:intron | 35.0% | |
| TTACAGAGTTTGAAAGGAAG+GGG | + | chr7_4:30632135-30632154 | Msa1149380:intron | 35.0% | |
| AAGTGCTTATCAACATCCTT+TGG | + | chr7_4:30632215-30632234 | Msa1149380:CDS | 35.0% | |
| !! | AACTAACTGCTTTTCATGCA+AGG | + | chr7_4:30632532-30632551 | Msa1149380:intron | 35.0% |
| TAGATTTCAGGATCTATCCT+TGG | - | chr7_4:30632603-30632622 | None:intergenic | 35.0% | |
| ATATATATATGCAAGGTCCG+GGG | - | chr7_4:30632690-30632709 | None:intergenic | 35.0% | |
| ! | AGATTTAACTTTGAGTCTGC+TGG | + | chr7_4:30632892-30632911 | Msa1149380:CDS | 35.0% |
| GCAATCACTCTTTCTTATCA+AGG | + | chr7_4:30632925-30632944 | Msa1149380:CDS | 35.0% | |
| CTTTCTTATCAAGGAGATTG+TGG | + | chr7_4:30632934-30632953 | Msa1149380:CDS | 35.0% | |
| ! | TTTCGTGCTATCCACTATTT+TGG | - | chr7_4:30633290-30633309 | None:intergenic | 35.0% |
| TATTACACGCCTACACAATA+TGG | - | chr7_4:30633411-30633430 | None:intergenic | 35.0% | |
| ACCCTTATAGAAGGAACTAT+AGG | - | chr7_4:30633441-30633460 | None:intergenic | 35.0% | |
| ! | CGAATGGTGTTTGTTAGTGA+AGG | - | chr7_4:30629477-30629496 | None:intergenic | 40.0% |
| !! | AGCTAGCTTTGATTTGTCCA+TGG | - | chr7_4:30629527-30629546 | None:intergenic | 40.0% |
| !! | TCATTTTGCCGCTTACGATT+CGG | - | chr7_4:30629591-30629610 | None:intergenic | 40.0% |
| ACCAACACCTGAATCCAAAA+TGG | + | chr7_4:30629627-30629646 | Msa1149380:CDS | 40.0% | |
| ! | ACCATTTTGGATTCAGGTGT+TGG | - | chr7_4:30629631-30629650 | None:intergenic | 40.0% |
| ! | AGAATAATCAGGGTGATGGT+GGG | + | chr7_4:30629902-30629921 | Msa1149380:CDS | 40.0% |
| !! | TGATGGTGGGAATAGAAGAA+GGG | + | chr7_4:30629915-30629934 | Msa1149380:CDS | 40.0% |
| ! | GAAGGGCTTTTCAGTTGATT+AGG | + | chr7_4:30629932-30629951 | Msa1149380:CDS | 40.0% |
| ! | CTTTTCAGTTGATTAGGGCT+TGG | + | chr7_4:30629938-30629957 | Msa1149380:CDS | 40.0% |
| TTTCAGTTGATTAGGGCTTG+GGG | + | chr7_4:30629940-30629959 | Msa1149380:CDS | 40.0% | |
| AACAAAGCAAGAAGGAAGGA+AGG | - | chr7_4:30630035-30630054 | None:intergenic | 40.0% | |
| TGTCCAACATGTATCAGTGT+CGG | - | chr7_4:30630100-30630119 | None:intergenic | 40.0% | |
| ! | GCACTGACACTTCTAATTGA+AGG | - | chr7_4:30630133-30630152 | None:intergenic | 40.0% |
| TGTGAGCTGTGATCAAACTA+AGG | + | chr7_4:30630419-30630438 | Msa1149380:intron | 40.0% | |
| GTGAGCTGTGATCAAACTAA+GGG | + | chr7_4:30630420-30630439 | Msa1149380:intron | 40.0% | |
| TGAGCTGTGATCAAACTAAG+GGG | + | chr7_4:30630421-30630440 | Msa1149380:intron | 40.0% | |
| !! | AGAGGGTGTTCTATTGATAG+AGG | + | chr7_4:30630496-30630515 | Msa1149380:intron | 40.0% |
| CTATTGATAGAGGTCAGAGT+TGG | + | chr7_4:30630506-30630525 | Msa1149380:intron | 40.0% | |
| GTCAGAGTTGGACCAATTAT+GGG | + | chr7_4:30630518-30630537 | Msa1149380:intron | 40.0% | |
| GCCTACAATAGACCCATAAT+TGG | - | chr7_4:30630533-30630552 | None:intergenic | 40.0% | |
| ! | GTTTGAGATTCCGTACCATA+TGG | + | chr7_4:30630910-30630929 | Msa1149380:intron | 40.0% |
| TCAAAGCCTTTCCCATTAAG+TGG | + | chr7_4:30630975-30630994 | Msa1149380:intron | 40.0% | |
| CAAAGCCTTTCCCATTAAGT+GGG | + | chr7_4:30630976-30630995 | Msa1149380:intron | 40.0% | |
| CATAGAACATGATCCATGAC+AGG | - | chr7_4:30631040-30631059 | None:intergenic | 40.0% | |
| !! | GTTGGGTCTTATTGTGGTTT+GGG | - | chr7_4:30631191-30631210 | None:intergenic | 40.0% |
| !! | AGTTGGGTCTTATTGTGGTT+TGG | - | chr7_4:30631192-30631211 | None:intergenic | 40.0% |
| ! | ACCGAACATGTTTTCATTGC+TGG | + | chr7_4:30631282-30631301 | Msa1149380:intron | 40.0% |
| GTCTAGACATATCCTAAGAC+AGG | - | chr7_4:30631542-30631561 | None:intergenic | 40.0% | |
| TACATATCCTAAGACAGGCT+TGG | - | chr7_4:30631691-30631710 | None:intergenic | 40.0% | |
| TATCATTTACCAGGTGACCT+TGG | + | chr7_4:30631948-30631967 | Msa1149380:intron | 40.0% | |
| ATCATTTACCAGGTGACCTT+GGG | + | chr7_4:30631949-30631968 | Msa1149380:intron | 40.0% | |
| TTGATAAGCACTTGACTCTG+AGG | - | chr7_4:30632208-30632227 | None:intergenic | 40.0% | |
| !! | AGAGAAGAAAGAGCATCTTG+TGG | + | chr7_4:30632338-30632357 | Msa1149380:CDS | 40.0% |
| CCTCCGGTTTAATAGATTTC+AGG | - | chr7_4:30632615-30632634 | None:intergenic | 40.0% | |
| CCTGAAATCTATTAAACCGG+AGG | + | chr7_4:30632612-30632631 | Msa1149380:intron | 40.0% | |
| GTTATCTTTGAATGCAGCAG+TGG | + | chr7_4:30632724-30632743 | Msa1149380:intron | 40.0% | |
| AAGTGTCTCTTCGTCATTTG+CGG | - | chr7_4:30632966-30632985 | None:intergenic | 40.0% | |
| !! | TGACGAAGAGACACTTTTTG+AGG | + | chr7_4:30632970-30632989 | Msa1149380:CDS | 40.0% |
| ! | GCAGTTGGTTTCTAAGTATG+AGG | + | chr7_4:30633018-30633037 | Msa1149380:CDS | 40.0% |
| GGTTTCTAAGTATGAGGAGT+TGG | + | chr7_4:30633024-30633043 | Msa1149380:CDS | 40.0% | |
| !! | TCACGAGTGTTTGACTTTTG+AGG | - | chr7_4:30633226-30633245 | None:intergenic | 40.0% |
| !! | CTCATTCGGTATTAGTCTTG+AGG | - | chr7_4:30633333-30633352 | None:intergenic | 40.0% |
| ATACCGAATGAGAAAAGCGA+AGG | + | chr7_4:30633341-30633360 | Msa1149380:exon | 40.0% | |
| !! | CAACCTTCGCTTTTCTCATT+CGG | - | chr7_4:30633347-30633366 | None:intergenic | 40.0% |
| TGTTGCTGTCCATATTGTGT+AGG | + | chr7_4:30633399-30633418 | Msa1149380:three_prime_UTR | 40.0% | |
| ATAAGGGTGATTATATCCCG+AGG | + | chr7_4:30633453-30633472 | Msa1149380:three_prime_UTR | 40.0% | |
| ACACCATTCGAATCCGATCT+AGG | + | chr7_4:30629487-30629506 | Msa1149380:five_prime_UTR | 45.0% | |
| CACCATTCGAATCCGATCTA+GGG | + | chr7_4:30629488-30629507 | Msa1149380:five_prime_UTR | 45.0% | |
| AACCCTAGATCGGATTCGAA+TGG | - | chr7_4:30629493-30629512 | None:intergenic | 45.0% | |
| GTCAGACAGAAACCCTAGAT+CGG | - | chr7_4:30629503-30629522 | None:intergenic | 45.0% | |
| AACATGAGCCGAATCGTAAG+CGG | + | chr7_4:30629580-30629599 | Msa1149380:CDS | 45.0% | |
| !! | TGGATTCAGGTGTTGGTGTT+TGG | - | chr7_4:30629624-30629643 | None:intergenic | 45.0% |
| ! | TCGTCGACCATTTTGGATTC+AGG | - | chr7_4:30629637-30629656 | None:intergenic | 45.0% |
| !! | TGTTGCTTCGTCGACCATTT+TGG | - | chr7_4:30629644-30629663 | None:intergenic | 45.0% |
| AATGGTCGACGAAGCAACAT+CGG | + | chr7_4:30629645-30629664 | Msa1149380:CDS | 45.0% | |
| CTGAGATTCATGCCCCAATT+TGG | - | chr7_4:30629685-30629704 | None:intergenic | 45.0% | |
| GGCATGAATCTCAGAATCTG+CGG | + | chr7_4:30629691-30629710 | Msa1149380:CDS | 45.0% | |
| ! | GAGAATAATCAGGGTGATGG+TGG | + | chr7_4:30629901-30629920 | Msa1149380:CDS | 45.0% |
| !! | GTGATGGTGGGAATAGAAGA+AGG | + | chr7_4:30629914-30629933 | Msa1149380:CDS | 45.0% |
| AAGCAAGAAGGAAGGAAGGA+AGG | - | chr7_4:30630031-30630050 | None:intergenic | 45.0% | |
| ACACCGACACTGATACATGT+TGG | + | chr7_4:30630094-30630113 | Msa1149380:intron | 45.0% | |
| ! | TTCTAATTGAAGGGCGTGTC+TGG | - | chr7_4:30630123-30630142 | None:intergenic | 45.0% |
| GAGCTGTGATCAAACTAAGG+GGG | + | chr7_4:30630422-30630441 | Msa1149380:intron | 45.0% | |
| AGCTGTGATCAAACTAAGGG+GGG | + | chr7_4:30630423-30630442 | Msa1149380:intron | 45.0% | |
| GGTCAGAGTTGGACCAATTA+TGG | + | chr7_4:30630517-30630536 | Msa1149380:intron | 45.0% | |
| GGCTTAGGCTACCCTTATTA+AGG | + | chr7_4:30630573-30630592 | Msa1149380:intron | 45.0% | |
| CCAATCCCACTTAATGGGAA+AGG | - | chr7_4:30630984-30631003 | None:intergenic | 45.0% | |
| CCTTTCCCATTAAGTGGGAT+TGG | + | chr7_4:30630981-30631000 | Msa1149380:intron | 45.0% | |
| CATTATGTCCTGTCCTGTCA+TGG | + | chr7_4:30631024-30631043 | Msa1149380:intron | 45.0% | |
| AACATGATCCATGACAGGAC+AGG | - | chr7_4:30631035-30631054 | None:intergenic | 45.0% | |
| GACATATCCTAAGACAGGCT+TGG | - | chr7_4:30631537-30631556 | None:intergenic | 45.0% | |
| ACTTCTGCAGACAAACTCTG+CGG | - | chr7_4:30631914-30631933 | None:intergenic | 45.0% | |
| AAAGATATCCCAAGGTCACC+TGG | - | chr7_4:30631960-30631979 | None:intergenic | 45.0% | |
| !! | GAAGGCGTCATATTTGGAAG+AGG | - | chr7_4:30632032-30632051 | None:intergenic | 45.0% |
| ! | AGGAGCACAAGACTATGTCA+TGG | - | chr7_4:30632069-30632088 | None:intergenic | 45.0% |
| GAATCACTTGACATGACGAC+AGG | + | chr7_4:30632159-30632178 | Msa1149380:CDS | 45.0% | |
| TATCTTTCAGGGGGATCCAA+AGG | - | chr7_4:30632234-30632253 | None:intergenic | 45.0% | |
| TGGAACTGGGTATCTTTCAG+GGG | - | chr7_4:30632244-30632263 | None:intergenic | 45.0% | |
| CTGGAACTGGGTATCTTTCA+GGG | - | chr7_4:30632245-30632264 | None:intergenic | 45.0% | |
| ! | TCTGGAACTGGGTATCTTTC+AGG | - | chr7_4:30632246-30632265 | None:intergenic | 45.0% |
| TTCTTCTCTTCAGCTGATGC+TGG | - | chr7_4:30632327-30632346 | None:intergenic | 45.0% | |
| GGCAGAGCCAAAACCTTTAA+AGG | + | chr7_4:30632407-30632426 | Msa1149380:CDS | 45.0% | |
| GGAAGCTTCTCAAAGTTCAG+AGG | + | chr7_4:30633045-30633064 | Msa1149380:CDS | 45.0% | |
| !! | CACAAAGTGTTGACACTGCA+GGG | + | chr7_4:30633068-30633087 | Msa1149380:CDS | 45.0% |
| CTGTTCAAAACCCTTCCGAA+AGG | + | chr7_4:30633104-30633123 | Msa1149380:CDS | 45.0% | |
| CTGTTCAAAACCCCAGTGAA+AGG | + | chr7_4:30633140-30633159 | Msa1149380:CDS | 45.0% | |
| TTCAACATGACTAACCCCCT+CGG | - | chr7_4:30633266-30633285 | None:intergenic | 45.0% | |
| !! | TCGGTATTAGTCTTGAGGCT+AGG | - | chr7_4:30633328-30633347 | None:intergenic | 45.0% |
| AGGGTTTCTGTCTGACTCCA+TGG | + | chr7_4:30629507-30629526 | Msa1149380:exon | 50.0% | |
| ! | AGCTAGCTCAATTCGGTGAG+AGG | + | chr7_4:30629539-30629558 | Msa1149380:CDS | 50.0% |
| ! | GCTTACGATTCGGCTCATGT+TGG | - | chr7_4:30629581-30629600 | None:intergenic | 50.0% |
| ACAGGCTTGGAAGCCAAAGT+TGG | - | chr7_4:30631524-30631543 | None:intergenic | 50.0% | |
| TTGGCTTCCAAGCCTGTCTT+AGG | + | chr7_4:30631527-30631546 | Msa1149380:intron | 50.0% | |
| ACAGGCTTGGAAGCCAAAGT+TGG | - | chr7_4:30631524-30631543 | None:intergenic | 50.0% | |
| TTGGCTTCCAAGCCTGTCTT+AGG | + | chr7_4:30631527-30631546 | Msa1149380:intron | 50.0% | |
| ! | TCTGAGGCATACGGAATAGG+TGG | - | chr7_4:30632192-30632211 | None:intergenic | 50.0% |
| !! | GACTCTGAGGCATACGGAAT+AGG | - | chr7_4:30632195-30632214 | None:intergenic | 50.0% |
| !! | GCACTTGACTCTGAGGCATA+CGG | - | chr7_4:30632201-30632220 | None:intergenic | 50.0% |
| GGAACTGGGTATCTTTCAGG+GGG | - | chr7_4:30632243-30632262 | None:intergenic | 50.0% | |
| AGATACCCAGTTCCAGAAGC+AGG | + | chr7_4:30632249-30632268 | Msa1149380:CDS | 50.0% | |
| GATACCCAGTTCCAGAAGCA+GGG | + | chr7_4:30632250-30632269 | Msa1149380:CDS | 50.0% | |
| TCTCTTCAGCTGATGCTGGT+TGG | - | chr7_4:30632323-30632342 | None:intergenic | 50.0% | |
| CAATGATGAGCTGCAGCAGT+TGG | + | chr7_4:30633003-30633022 | Msa1149380:CDS | 50.0% | |
| !! | GCACAAAGTGTTGACACTGC+AGG | + | chr7_4:30633067-30633086 | Msa1149380:CDS | 50.0% |
| AGCTTCCACTTCACGCCTTT+CGG | - | chr7_4:30633122-30633141 | None:intergenic | 50.0% | |
| TCACCTTCACGCCTTTCACT+GGG | - | chr7_4:30633154-30633173 | None:intergenic | 50.0% | |
| ATCACCTTCACGCCTTTCAC+TGG | - | chr7_4:30633155-30633174 | None:intergenic | 50.0% | |
| AGCAGCTTCTGACAGCTCTT+CGG | - | chr7_4:30633182-30633201 | None:intergenic | 50.0% | |
| GGCATGTGTTGAGCAGACCT+TGG | - | chr7_4:30631170-30631189 | None:intergenic | 55.0% | |
| !! | GTAGCCCTGCTTCTGGAACT+GGG | - | chr7_4:30632257-30632276 | None:intergenic | 55.0% |
| !! | TGTAGCCCTGCTTCTGGAAC+TGG | - | chr7_4:30632258-30632277 | None:intergenic | 55.0% |
| AGAGCATGTAGCCCTGCTTC+TGG | - | chr7_4:30632264-30632283 | None:intergenic | 55.0% | |
| AGGGCTACATGCTCTTGCTC+TGG | + | chr7_4:30632269-30632288 | Msa1149380:CDS | 55.0% | |
| TGACACTGCAGGGCATGATG+CGG | + | chr7_4:30633078-30633097 | Msa1149380:CDS | 55.0% | |
| CCACTTCACGCCTTTCGGAA+GGG | - | chr7_4:30633117-30633136 | None:intergenic | 55.0% | |
| TCCACTTCACGCCTTTCGGA+AGG | - | chr7_4:30633118-30633137 | None:intergenic | 55.0% | |
| ! | AACCCCAGTGAAAGGCGTGA+AGG | + | chr7_4:30633148-30633167 | Msa1149380:CDS | 55.0% |
| CACCTTCACGCCTTTCACTG+GGG | - | chr7_4:30633153-30633172 | None:intergenic | 55.0% | |
| AGTCCCTGTTGATGCAACCG+AGG | + | chr7_4:30633246-30633265 | Msa1149380:CDS | 55.0% | |
| GTCCCTGTTGATGCAACCGA+GGG | + | chr7_4:30633247-30633266 | Msa1149380:CDS | 55.0% | |
| TCCCTGTTGATGCAACCGAG+GGG | + | chr7_4:30633248-30633267 | Msa1149380:CDS | 55.0% | |
| TAGGGCTTGGGGTGAGTCTC+AGG | + | chr7_4:30629951-30629970 | Msa1149380:CDS | 60.0% | |
| AGTGGTCGGGGTTTGAACCC+CGG | + | chr7_4:30632670-30632689 | Msa1149380:intron | 60.0% | |
| ! | CCCTTCCGAAAGGCGTGAAG+TGG | + | chr7_4:30633114-30633133 | Msa1149380:CDS | 60.0% |
| CCCCCTCGGTTGCATCAACA+GGG | - | chr7_4:30633252-30633271 | None:intergenic | 60.0% | |
| CCCTGTTGATGCAACCGAGG+GGG | + | chr7_4:30633249-30633268 | Msa1149380:CDS | 60.0% | |
| ACCCCCTCGGTTGCATCAAC+AGG | - | chr7_4:30633253-30633272 | None:intergenic | 60.0% | |
| TCGGCTCATGTTGGCGCTGC+TGG | - | chr7_4:30629572-30629591 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 30629418 | 30633574 | 30629418 | ID=Msa1149380;Name=Msa1149380 |
| chr7_4 | mRNA | 30629418 | 30633574 | 30629418 | ID=Msa1149380-mRNA-1;Parent=Msa1149380;Name=Msa1149380-mRNA-1;_AED=0.02;_eAED=0.02;_QI=108|1|1|1|1|1|3|223|411 |
| chr7_4 | exon | 30629418 | 30630011 | 30629418 | ID=Msa1149380-mRNA-1:exon:7433;Parent=Msa1149380-mRNA-1 |
| chr7_4 | exon | 30632141 | 30632428 | 30632141 | ID=Msa1149380-mRNA-1:exon:7434;Parent=Msa1149380-mRNA-1 |
| chr7_4 | exon | 30632890 | 30633574 | 30632890 | ID=Msa1149380-mRNA-1:exon:7435;Parent=Msa1149380-mRNA-1 |
| chr7_4 | five_prime_UTR | 30629418 | 30629525 | 30629418 | ID=Msa1149380-mRNA-1:five_prime_utr;Parent=Msa1149380-mRNA-1 |
| chr7_4 | CDS | 30629526 | 30630011 | 30629526 | ID=Msa1149380-mRNA-1:cds;Parent=Msa1149380-mRNA-1 |
| chr7_4 | CDS | 30632141 | 30632428 | 30632141 | ID=Msa1149380-mRNA-1:cds;Parent=Msa1149380-mRNA-1 |
| chr7_4 | CDS | 30632890 | 30633351 | 30632890 | ID=Msa1149380-mRNA-1:cds;Parent=Msa1149380-mRNA-1 |
| chr7_4 | three_prime_UTR | 30633352 | 30633574 | 30633352 | ID=Msa1149380-mRNA-1:three_prime_utr;Parent=Msa1149380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
