AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1440790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440790 MtrunA17_Chr8g0354571 86.069 524 19 2 1 470 1 524 0.0 899
Msa1440790 MtrunA17_Chr8g0354571 84.097 371 26 3 492 829 154 524 0.0 617
Msa1440790 MtrunA17_Chr8g0354511 73.664 524 84 2 1 470 1 524 0.0 768
Msa1440790 MtrunA17_Chr8g0354511 74.797 369 60 2 494 829 156 524 0.0 535
Msa1440790 MtrunA17_Chr8g0354531 73.092 524 86 3 1 470 123 645 0.0 763
Msa1440790 MtrunA17_Chr8g0354531 78.187 353 44 3 509 829 294 645 0.0 543
Msa1440790 MtrunA17_Chr2g0313771 51.154 520 194 5 8 470 7 523 5.23e-179 525
Msa1440790 MtrunA17_Chr2g0313771 57.423 357 116 3 505 829 171 523 6.00e-135 411
Msa1440790 MtrunA17_Chr2g0313781 49.434 530 197 5 8 470 3 528 2.18e-174 513
Msa1440790 MtrunA17_Chr2g0313781 55.840 351 122 2 512 829 178 528 7.56e-131 401
Msa1440790 MtrunA17_Chr2g0313821 50.000 520 201 5 8 472 3 518 5.25e-173 509
Msa1440790 MtrunA17_Chr2g0313821 55.679 361 124 4 502 829 159 516 1.44e-129 397
Msa1440790 MtrunA17_Chr2g0313801 49.421 518 203 4 8 470 3 516 1.05e-171 506
Msa1440790 MtrunA17_Chr2g0313801 54.342 357 130 2 506 829 160 516 1.59e-128 394
Msa1440790 MtrunA17_Chr2g0313791 49.518 519 196 6 8 470 3 511 3.34e-171 504
Msa1440790 MtrunA17_Chr2g0313791 55.493 355 125 2 508 829 157 511 3.07e-131 401
Msa1440790 MtrunA17_Chr8g0354561 80.952 315 23 2 1 298 83 377 6.69e-171 499
Msa1440790 MtrunA17_Chr8g0354561 77.957 186 20 2 492 676 236 401 1.31e-84 275
Msa1440790 MtrunA17_Chr2g0313831 49.611 514 198 5 14 470 7 516 1.34e-167 495
Msa1440790 MtrunA17_Chr2g0313831 55.462 357 126 2 506 829 160 516 3.21e-126 389
Msa1440790 MtrunA17_Chr2g0313751 48.462 520 205 7 8 472 34 545 1.25e-165 491
Msa1440790 MtrunA17_Chr2g0313751 54.054 370 136 3 494 829 174 543 7.78e-129 396
Msa1440790 MtrunA17_Chr2g0313811 50.391 512 183 5 26 470 21 528 1.57e-162 483
Msa1440790 MtrunA17_Chr2g0313811 56.410 351 120 2 512 829 178 528 6.13e-132 404
Msa1440790 MtrunA17_Chr2g0307301 46.346 520 218 7 8 472 7 520 3.37e-160 476
Msa1440790 MtrunA17_Chr2g0307301 50.139 361 144 3 502 829 161 518 3.04e-118 368
Msa1440790 MtrunA17_Chr2g0307291 46.490 527 220 7 1 472 1 520 1.04e-159 475
Msa1440790 MtrunA17_Chr2g0307291 50.693 361 142 3 502 829 161 518 6.57e-117 364
Msa1440790 MtrunA17_Chr5g0446131 46.705 516 213 6 13 472 7 516 6.57e-159 473
Msa1440790 MtrunA17_Chr5g0446131 52.925 359 131 4 505 829 160 514 8.71e-123 379
Msa1440790 MtrunA17_Chr2g0288661 46.979 513 212 6 13 470 11 518 6.44e-156 465
Msa1440790 MtrunA17_Chr2g0288661 51.081 370 147 3 494 829 149 518 1.91e-124 384
Msa1440790 MtrunA17_Chr2g0313761 49.174 484 186 5 44 472 35 513 7.63e-154 460
Msa1440790 MtrunA17_Chr2g0313761 54.595 370 134 3 494 829 142 511 2.50e-128 394
Msa1440790 MtrunA17_Chr4g0014051 45.472 519 223 8 7 470 15 528 2.68e-149 449
Msa1440790 MtrunA17_Chr4g0014051 49.587 363 142 7 502 829 172 528 1.37e-110 348
Msa1440790 MtrunA17_Chr8g0354541 94.253 174 10 0 297 470 5 178 1.21e-113 343
Msa1440790 MtrunA17_Chr8g0354541 97.222 144 4 0 686 829 35 178 2.26e-93 290
Msa1440790 MtrunA17_Chr4g0063221 33.932 501 265 10 32 473 29 522 1.11e-85 282
Msa1440790 MtrunA17_Chr4g0063221 35.556 360 185 5 509 829 168 519 5.58e-62 218
Msa1440790 MtrunA17_Chr7g0262111 34.988 403 226 7 101 471 108 506 1.56e-68 235
Msa1440790 MtrunA17_Chr7g0262111 34.454 357 187 7 507 829 162 505 1.65e-58 208
Msa1440790 MtrunA17_Chr3g0128461 28.893 533 302 14 2 469 3 523 1.71e-68 236
Msa1440790 MtrunA17_Chr3g0128461 30.387 362 195 8 510 828 176 523 6.47e-53 192
Msa1440790 MtrunA17_Chr1g0193811 29.377 514 306 10 11 470 6 516 5.53e-68 234
Msa1440790 MtrunA17_Chr1g0193811 32.533 375 206 7 494 829 150 516 3.14e-58 207
Msa1440790 MtrunA17_Chr7g0235261 28.541 473 274 9 56 470 44 510 4.84e-65 226
Msa1440790 MtrunA17_Chr7g0235261 29.722 360 208 8 506 829 160 510 8.66e-48 177
Msa1440790 MtrunA17_Chr1g0154731 30.000 510 278 13 19 470 15 503 1.85e-63 221
Msa1440790 MtrunA17_Chr1g0154731 30.919 359 201 5 505 829 158 503 3.39e-51 187
Msa1440790 MtrunA17_Chr4g0004601 28.544 522 296 14 11 463 11 524 1.30e-62 220
Msa1440790 MtrunA17_Chr4g0004601 29.178 353 205 8 506 822 181 524 1.23e-45 172
Msa1440790 MtrunA17_Chr2g0308651 34.085 399 214 9 121 470 17 415 1.15e-58 206
Msa1440790 MtrunA17_Chr2g0308651 32.418 364 202 5 510 829 52 415 3.58e-50 182
Msa1440790 MtrunA17_Chr8g0364081 28.383 532 299 11 11 470 20 541 2.79e-58 208
Msa1440790 MtrunA17_Chr8g0364081 30.518 367 207 6 510 829 176 541 2.90e-45 171
Msa1440790 MtrunA17_Chr1g0203141 31.746 378 216 7 130 471 145 516 5.97e-58 206
Msa1440790 MtrunA17_Chr1g0203141 30.252 357 205 7 506 829 170 515 1.23e-52 191
Msa1440790 MtrunA17_Chr6g0457421 27.165 508 314 9 13 470 6 507 7.05e-58 206
Msa1440790 MtrunA17_Chr6g0457421 33.056 360 190 8 505 829 164 507 9.44e-54 194
Msa1440790 MtrunA17_Chr8g0362731 30.633 395 229 8 116 473 22 408 1.16e-57 202
Msa1440790 MtrunA17_Chr8g0362731 27.933 358 217 6 506 829 58 408 6.51e-43 161
Msa1440790 MtrunA17_Chr7g0215181 28.517 526 295 13 13 472 1 511 2.31e-56 202
Msa1440790 MtrunA17_Chr7g0215181 34.770 348 174 8 523 829 174 509 2.95e-53 193
Msa1440790 MtrunA17_Chr1g0203151 31.746 378 216 7 130 471 141 512 3.19e-55 199
Msa1440790 MtrunA17_Chr1g0203151 30.226 354 206 5 509 829 166 511 4.78e-52 190
Msa1440790 MtrunA17_Chr8g0336361 26.497 551 310 11 14 470 9 558 1.70e-54 198
Msa1440790 MtrunA17_Chr8g0336361 27.735 393 214 11 503 829 170 558 3.47e-41 159
Msa1440790 MtrunA17_Chr6g0479681 31.726 394 211 9 130 471 143 530 3.40e-54 196
Msa1440790 MtrunA17_Chr6g0479681 30.270 370 201 5 509 829 168 529 1.01e-51 189
Msa1440790 MtrunA17_Chr6g0472221 30.340 412 239 9 101 470 121 526 2.24e-47 177
Msa1440790 MtrunA17_Chr6g0472221 30.833 360 209 7 503 829 174 526 2.53e-45 171
Msa1440790 MtrunA17_Chr6g0472171 38.732 142 87 0 688 829 17 158 6.00e-37 136
Msa1440790 MtrunA17_Chr6g0472171 38.406 138 85 0 333 470 21 158 1.76e-35 132
Msa1440790 MtrunA17_Chr1g0182861 40.141 142 85 0 688 829 22 163 7.32e-37 136
Msa1440790 MtrunA17_Chr1g0182861 40.580 138 82 0 333 470 26 163 6.63e-36 133
Msa1440790 MtrunA17_Chr3g0108651 48.649 111 57 0 355 465 1 111 1.10e-30 117
Msa1440790 MtrunA17_Chr3g0108651 48.649 111 57 0 714 824 1 111 1.62e-30 116
Msa1440790 MtrunA17_Chr5g0396521 24.186 430 241 15 115 462 136 562 9.94e-24 106
Msa1440790 MtrunA17_Chr5g0396521 23.274 391 217 15 509 821 177 562 5.54e-16 82.0
Msa1440790 MtrunA17_Chr2g0307321 51.613 93 44 1 512 603 1 93 1.20e-23 96.7
Msa1440790 MtrunA17_Chr2g0307321 50.538 93 45 1 158 249 1 93 1.01e-22 94.0
Msa1440790 MtrunA17_Chr0c19g0493771 24.331 411 254 17 101 465 236 635 2.23e-22 102
Msa1440790 MtrunA17_Chr0c19g0493771 22.520 373 209 16 506 824 289 635 3.04e-14 77.0
Msa1440790 MtrunA17_Chr1g0179811 24.265 408 261 11 101 462 126 531 4.27e-21 98.2
Msa1440790 MtrunA17_Chr1g0179811 37.121 132 79 4 693 821 401 531 9.64e-16 81.3
Msa1440790 MtrunA17_Chr5g0403351 24.294 354 209 11 501 805 130 473 1.17e-16 84.0
Msa1440790 MtrunA17_Chr5g0403351 23.628 419 249 16 93 446 61 473 4.83e-16 82.0
Msa1440790 MtrunA17_Chr5g0419451 23.499 383 246 14 101 441 109 486 2.38e-16 83.2
Msa1440790 MtrunA17_Chr3g0101731 23.002 413 258 16 102 465 87 488 2.70e-16 82.8
Msa1440790 MtrunA17_Chr3g0101631 23.577 369 234 14 118 446 106 466 5.36e-16 82.0
Msa1440790 MtrunA17_Chr5g0445531 25.668 374 227 15 114 446 106 469 7.92e-16 81.3
Msa1440790 MtrunA17_Chr1g0178971 23.002 413 260 15 81 443 77 481 1.13e-15 80.9
Msa1440790 MtrunA17_Chr4g0024771 25.737 373 229 14 114 446 106 470 1.30e-15 80.5
Msa1440790 MtrunA17_Chr4g0024771 24.768 323 193 13 522 805 159 470 1.51e-14 77.4
Msa1440790 MtrunA17_Chr4g0026941 21.882 457 277 15 81 471 98 540 1.44e-15 80.9
Msa1440790 MtrunA17_Chr8g0390871 30.667 150 103 1 298 446 48 197 1.61e-15 77.0
Msa1440790 MtrunA17_Chr8g0390871 31.304 115 79 0 691 805 83 197 2.35e-13 70.5
Msa1440790 MtrunA17_Chr8g0351311 23.202 431 258 16 97 465 88 507 2.82e-15 79.7
Msa1440790 MtrunA17_Chr5g0445371 30.374 214 126 10 601 805 1 200 3.89e-15 76.3
Msa1440790 MtrunA17_Chr5g0445371 27.404 208 135 7 247 446 1 200 2.03e-12 68.2
Msa1440790 MtrunA17_Chr3g0101721 24.933 373 228 13 116 443 106 471 5.66e-15 78.6
Msa1440790 MtrunA17_Chr4g0020041 25.161 310 184 11 198 465 186 489 6.58e-15 78.6
Msa1440790 MtrunA17_Chr3g0101691 23.398 359 216 12 136 446 128 475 1.08e-14 77.8
Msa1440790 MtrunA17_Chr5g0431641 25.401 374 229 16 114 446 106 470 1.76e-14 77.0
Msa1440790 MtrunA17_Chr4g0058191 24.286 350 218 12 136 443 114 458 1.81e-14 77.0
Msa1440790 MtrunA17_Chr4g0004481 29.299 157 99 3 322 471 342 493 2.53e-14 76.6
Msa1440790 MtrunA17_Chr4g0004481 29.861 144 89 3 693 829 354 492 2.02e-12 70.5
Msa1440790 MtrunA17_Chr1g0163351 27.197 239 148 6 252 469 271 504 2.55e-14 76.6
Msa1440790 MtrunA17_Chr1g0163351 26.531 245 147 9 606 828 271 504 5.94e-12 68.9
Msa1440790 MtrunA17_Chr8g0351461 23.969 388 236 12 123 455 110 493 2.56e-14 76.6
Msa1440790 MtrunA17_Chr2g0321171 22.249 409 262 13 81 443 72 470 2.68e-14 76.6
Msa1440790 MtrunA17_Chr5g0446161 29.801 151 104 2 300 449 325 474 4.80e-14 75.9
Msa1440790 MtrunA17_Chr7g0227281 29.032 155 98 3 322 469 344 493 5.42e-14 75.5
Msa1440790 MtrunA17_Chr7g0227281 27.703 148 85 4 693 828 356 493 2.76e-12 70.1
Msa1440790 MtrunA17_Chr5g0430131 25.685 292 172 9 197 446 186 474 6.74e-14 75.1
Msa1440790 MtrunA17_Chr5g0430131 24.528 318 183 11 551 824 186 490 1.04e-11 68.2
Msa1440790 MtrunA17_Chr3g0101601 25.135 370 228 18 118 446 106 467 7.63e-14 75.1
Msa1440790 MtrunA17_Chr3g0101611 24.138 377 238 11 110 443 100 471 7.66e-14 75.1
Msa1440790 MtrunA17_Chr8g0387001 23.988 346 191 7 539 827 173 503 7.84e-14 75.1
Msa1440790 MtrunA17_Chr8g0387001 22.936 436 274 13 101 479 86 516 1.06e-13 74.7
Msa1440790 MtrunA17_Chr3g0101621 24.932 365 227 15 118 443 103 459 8.09e-14 75.1
Msa1440790 MtrunA17_Chr4g0058281 24.022 358 226 11 128 443 128 481 8.31e-14 75.1
Msa1440790 MtrunA17_Chr5g0403331 23.592 373 234 11 118 446 109 474 9.36e-14 74.7
Msa1440790 MtrunA17_Chr8g0361471 24.427 393 243 15 102 446 85 471 1.20e-13 74.3
Msa1440790 MtrunA17_Chr5g0431591 23.973 292 179 8 194 446 1 288 1.30e-13 72.8
Msa1440790 MtrunA17_Chr6g0465511 24.112 394 243 15 102 446 85 471 1.34e-13 74.3
Msa1440790 MtrunA17_Chr4g0038271 21.759 432 269 14 101 469 134 559 1.38e-13 74.3
Msa1440790 MtrunA17_Chr4g0038271 27.007 137 99 1 693 828 423 559 2.35e-12 70.5
Msa1440790 MtrunA17_Chr6g0466331 24.112 394 243 15 102 446 85 471 1.39e-13 74.3
Msa1440790 MtrunA17_Chr8g0351441 23.097 381 234 11 130 455 117 493 1.60e-13 73.9
Msa1440790 MtrunA17_Chr3g0116741 21.709 433 279 15 65 446 63 486 1.62e-13 73.9
Msa1440790 MtrunA17_Chr8g0351391 23.394 436 259 18 97 469 88 511 1.69e-13 73.9
Msa1440790 MtrunA17_Chr5g0443731 23.932 351 210 10 131 443 115 446 2.06e-13 73.6
Msa1440790 MtrunA17_Chr2g0280011 30.303 165 104 5 298 453 29 191 2.11e-13 70.1
Msa1440790 MtrunA17_Chr5g0405001 21.615 384 248 9 464 802 106 481 2.28e-13 73.6
Msa1440790 MtrunA17_Chr1g0197851 26.054 261 172 12 202 446 211 466 2.36e-13 73.6
Msa1440790 MtrunA17_Chr8g0351401 23.499 383 222 12 122 443 110 482 2.46e-13 73.6
Msa1440790 MtrunA17_Chr1g0197881 26.054 261 172 12 202 446 210 465 2.56e-13 73.2
Msa1440790 MtrunA17_Chr3g0101711 22.606 376 236 13 136 466 127 492 2.73e-13 73.2
Msa1440790 MtrunA17_Chr3g0101711 22.280 386 230 14 470 805 109 474 5.01e-12 69.3
Msa1440790 MtrunA17_Chr5g0431671 24.185 368 231 13 119 446 112 471 2.81e-13 73.2
Msa1440790 MtrunA17_Chr5g0431671 23.867 331 201 12 515 805 152 471 1.82e-12 70.9
Msa1440790 MtrunA17_Chr6g0449331 26.519 181 123 5 297 469 336 514 2.92e-13 73.2
Msa1440790 MtrunA17_Chr6g0449331 30.935 139 88 5 695 828 379 514 8.61e-12 68.6
Msa1440790 MtrunA17_Chr8g0390881 23.423 333 189 9 185 465 173 491 3.38e-13 73.2
Msa1440790 MtrunA17_Chr8g0390881 23.684 304 194 9 539 805 173 475 6.39e-13 72.0
Msa1440790 MtrunA17_Chr1g0197891 25.670 261 173 12 202 446 211 466 4.25e-13 72.8
Msa1440790 MtrunA17_Chr1g0204241 26.496 234 154 6 244 465 65 292 6.45e-13 70.5
Msa1440790 MtrunA17_Chr1g0204241 27.468 233 158 6 598 824 65 292 4.47e-12 67.8
Msa1440790 MtrunA17_Chr5g0446151 29.801 151 104 2 300 449 326 475 7.73e-13 72.0
Msa1440790 MtrunA17_Chr5g0430101 29.605 152 103 3 298 446 322 472 8.86e-13 71.6
Msa1440790 MtrunA17_Chr5g0430101 23.780 328 196 12 539 824 173 488 2.63e-12 70.1
Msa1440790 MtrunA17_Chr8g0377341 23.636 495 309 19 33 473 51 530 9.27e-13 71.6
Msa1440790 MtrunA17_Chr4g0058211 32.215 149 96 5 298 443 40 186 1.01e-12 68.6
Msa1440790 MtrunA17_Chr2g0307311 31.967 122 61 4 43 147 6 122 1.16e-12 65.9
Msa1440790 MtrunA17_Chr7g0246221 26.068 234 137 6 246 444 240 472 1.31e-12 71.2
Msa1440790 MtrunA17_Chr4g0058231 22.626 358 222 11 136 443 117 469 1.36e-12 71.2
Msa1440790 MtrunA17_Chr7g0255131 25.356 351 174 15 539 824 176 503 1.57e-12 70.9
Msa1440790 MtrunA17_Chr6g0449381 23.297 279 171 7 589 828 230 504 1.83e-12 70.9
Msa1440790 MtrunA17_Chr6g0449381 23.132 281 169 10 234 469 226 504 3.36e-12 69.7
Msa1440790 MtrunA17_Chr2g0334021 32.394 142 93 3 303 443 331 470 1.89e-12 70.5
Msa1440790 MtrunA17_Chr5g0430041 32.540 126 80 4 324 446 23 146 1.98e-12 66.6
Msa1440790 MtrunA17_Chr3g0119681 23.056 373 187 16 531 828 169 516 2.19e-12 70.5
Msa1440790 MtrunA17_Chr3g0101751 22.154 325 200 9 522 802 161 476 2.20e-12 70.5
Msa1440790 MtrunA17_Chr6g0449341 27.473 182 120 6 297 469 384 562 2.67e-12 70.5
Msa1440790 MtrunA17_Chr3g0101761 23.529 374 232 13 136 465 125 488 2.70e-12 70.1
Msa1440790 MtrunA17_Chr3g0101761 22.691 379 231 14 470 802 107 469 9.52e-12 68.6
Msa1440790 MtrunA17_Chr1g0162811 22.571 350 226 10 136 446 127 470 2.87e-12 70.1
Msa1440790 MtrunA17_Chr7g0227291 27.742 155 100 3 322 469 344 493 2.93e-12 70.1
Msa1440790 MtrunA17_Chr5g0445421 25.301 249 140 8 593 805 285 523 2.96e-12 70.1
Msa1440790 MtrunA17_Chr6g0463621 27.485 171 115 5 300 465 24 190 2.98e-12 66.6
Msa1440790 MtrunA17_Chr5g0403451 26.582 158 101 3 320 469 128 278 3.38e-12 68.2
Msa1440790 MtrunA17_Chr5g0403451 31.452 124 68 5 692 806 141 256 2.79e-11 65.1
Msa1440790 MtrunA17_Chr5g0430151 30.252 119 80 2 689 805 29 146 3.50e-12 65.9
Msa1440790 MtrunA17_Chr5g0430151 29.371 143 97 3 307 446 5 146 5.08e-12 65.5
Msa1440790 MtrunA17_Chr1g0163491 25.000 220 143 5 267 469 306 520 3.60e-12 69.7
Msa1440790 MtrunA17_Chr1g0163491 23.757 362 192 16 533 828 177 520 4.34e-11 66.2
Msa1440790 MtrunA17_Chr1g0164321 24.382 283 151 8 600 828 273 546 4.08e-12 69.7
Msa1440790 MtrunA17_Chr1g0164321 28.000 150 106 2 322 469 397 546 7.94e-12 68.9
Msa1440790 MtrunA17_Chr5g0445451 25.455 330 184 16 521 805 158 470 4.14e-12 69.7
Msa1440790 MtrunA17_Chr5g0430081 27.485 171 117 4 298 465 323 489 4.15e-12 69.7
Msa1440790 MtrunA17_Chr6g0484811 23.457 405 243 14 95 443 80 473 4.63e-12 69.3
Msa1440790 MtrunA17_Chr1g0184421 24.079 353 192 13 532 828 171 503 4.68e-12 69.3
Msa1440790 MtrunA17_Chr1g0197871 31.788 151 93 7 298 443 318 463 4.72e-12 69.3
Msa1440790 MtrunA17_Chr5g0445441 26.444 329 182 14 521 805 199 511 5.45e-12 69.3
Msa1440790 MtrunA17_Chr4g0067191 21.258 461 250 18 101 469 75 514 1.28e-11 68.2
Msa1440790 MtrunA17_Chr1g0163451 25.654 191 113 6 297 469 344 523 1.61e-11 67.8
Msa1440790 MtrunA17_Chr1g0163451 27.397 146 84 4 695 828 388 523 8.29e-11 65.5
Msa1440790 MtrunA17_Chr1g0163461 26.702 191 111 6 297 469 339 518 1.65e-11 67.8
Msa1440790 MtrunA17_Chr1g0163461 28.571 147 81 5 695 828 383 518 7.09e-11 65.9
Msa1440790 MtrunA17_Chr1g0151221 25.751 233 151 8 231 446 275 502 1.80e-11 67.8
Msa1440790 MtrunA17_Chr8g0357431 22.695 423 272 13 70 443 54 470 2.39e-11 67.0
Msa1440790 MtrunA17_Chr2g0280081 28.387 155 101 4 298 443 822 975 2.82e-11 67.4
Msa1440790 MtrunA17_Chr1g0171041 26.705 176 95 7 661 817 335 495 3.42e-11 66.6
Msa1440790 MtrunA17_Chr4g0035921 23.009 339 198 10 165 446 151 483 3.46e-11 66.6
Msa1440790 MtrunA17_Chr2g0280061 28.962 183 110 7 298 465 29 206 3.52e-11 63.5
Msa1440790 MtrunA17_Chr2g0280071 29.630 162 103 5 298 450 354 513 4.79e-11 66.6
Msa1440790 MtrunA17_Chr1g0164341 32.967 91 60 1 380 469 6 96 4.92e-11 60.5
Msa1440790 MtrunA17_Chr1g0164341 32.967 91 60 1 739 828 6 96 5.12e-11 60.5
Msa1440790 MtrunA17_Chr4g0011981 29.452 146 100 3 300 443 320 464 5.91e-11 65.9
Msa1440790 MtrunA17_Chr1g0210091 27.311 238 147 9 253 470 305 536 5.99e-11 65.9
Msa1440790 MtrunA17_Chr8g0357421 21.362 323 203 9 522 802 156 469 9.17e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1440790 AT3G14690.1 45.759 507 218 7 17 470 10 512 1.45e-151 454
Msa1440790 AT3G14690.1 49.596 371 146 6 494 829 148 512 4.43e-115 360
Msa1440790 AT3G14690.2 45.759 507 218 7 17 470 45 547 8.00e-151 454
Msa1440790 AT3G14690.2 51.130 354 133 5 510 829 200 547 1.92e-114 359
Msa1440790 AT3G14680.1 46.748 492 208 6 29 470 25 512 2.83e-148 446
Msa1440790 AT3G14680.1 52.235 358 131 5 506 829 161 512 1.10e-117 367
Msa1440790 AT3G14660.1 46.341 492 210 6 29 470 25 512 5.87e-148 445
Msa1440790 AT3G14660.1 49.057 371 148 6 494 829 148 512 2.56e-113 355
Msa1440790 AT3G14640.1 45.951 494 211 7 29 470 25 514 4.13e-145 437
Msa1440790 AT3G14640.1 50.281 356 135 6 510 829 165 514 4.46e-111 349
Msa1440790 AT3G14640.2 45.951 494 211 7 29 470 47 536 1.89e-144 437
Msa1440790 AT3G14640.2 50.281 356 135 6 510 829 187 536 1.43e-110 348
Msa1440790 AT3G14630.1 44.990 509 226 6 12 470 4 508 2.40e-142 430
Msa1440790 AT3G14630.1 49.057 371 148 5 494 829 144 508 2.26e-112 352
Msa1440790 AT3G14650.1 45.455 495 210 7 29 470 25 512 3.61e-142 430
Msa1440790 AT3G14650.1 49.057 371 148 6 494 829 148 512 1.20e-110 348
Msa1440790 AT3G14610.1 44.556 496 220 7 26 470 21 512 8.71e-142 429
Msa1440790 AT3G14610.1 50.696 359 136 4 506 829 160 512 7.68e-116 362
Msa1440790 AT3G14630.2 44.990 509 226 6 12 470 59 563 9.53e-142 431
Msa1440790 AT3G14630.2 49.057 371 148 5 494 829 199 563 5.77e-112 353
Msa1440790 AT3G14620.1 44.177 498 217 10 26 470 26 515 1.12e-137 419
Msa1440790 AT3G14620.1 46.113 373 155 6 494 829 152 515 5.69e-105 333
Msa1440790 AT3G14660.2 48.913 368 144 6 496 829 9 366 1.16e-114 353
Msa1440790 AT3G14660.2 48.997 349 145 3 155 470 18 366 5.98e-113 349
Msa1440790 AT2G26710.1 35.236 508 275 8 14 471 13 516 1.38e-96 311
Msa1440790 AT2G26710.1 35.457 361 180 4 509 829 168 515 5.95e-72 246
Msa1440790 AT3G14660.3 39.093 353 161 6 29 331 25 373 6.50e-73 244
Msa1440790 AT3G14660.3 43.367 196 102 4 494 686 148 337 1.74e-43 162
Msa1440790 AT5G24910.1 30.812 542 283 15 1 465 1 527 5.76e-64 224
Msa1440790 AT5G24910.1 33.149 362 192 7 506 824 173 527 5.53e-56 202
Msa1440790 AT4G27710.1 28.817 524 298 12 13 470 3 517 2.95e-63 222
Msa1440790 AT4G27710.1 31.367 373 212 6 494 829 152 517 1.37e-52 192
Msa1440790 AT5G24900.1 29.104 536 295 13 1 465 1 522 6.12e-62 218
Msa1440790 AT5G24900.1 32.584 356 195 8 509 824 172 522 2.50e-53 194
Msa1440790 AT5G24900.2 32.995 394 210 8 119 465 19 405 6.50e-62 215
Msa1440790 AT5G24900.2 32.584 356 195 8 509 824 55 405 2.08e-54 194
Msa1440790 AT1G75130.1 32.432 407 240 8 97 472 103 505 1.86e-59 211
Msa1440790 AT1G75130.1 31.198 359 198 7 506 829 159 503 1.23e-52 192
Msa1440790 AT5G52400.1 28.762 525 313 12 1 470 1 519 2.41e-59 211
Msa1440790 AT5G52400.1 31.933 357 196 7 506 829 177 519 3.53e-51 188
Msa1440790 AT2G46960.2 28.715 498 281 12 36 470 31 517 5.48e-57 204
Msa1440790 AT2G46960.2 32.399 321 171 6 545 829 207 517 2.62e-49 182
Msa1440790 AT2G46960.1 30.709 381 223 7 128 470 24 401 1.15e-56 200
Msa1440790 AT2G46960.1 32.399 321 171 6 545 829 91 401 2.07e-50 182
Msa1440790 AT2G46950.1 30.567 494 275 15 33 470 89 570 1.30e-55 202
Msa1440790 AT2G46950.1 32.602 319 173 4 545 829 260 570 1.14e-48 182
Msa1440790 AT5G38450.1 27.660 517 305 14 13 472 14 518 1.66e-53 194
Msa1440790 AT5G38450.1 31.921 354 199 6 513 829 168 516 1.00e-43 166
Msa1440790 AT1G67110.1 27.376 526 298 14 10 470 4 510 7.99e-50 184
Msa1440790 AT1G67110.1 32.915 319 171 5 545 829 201 510 5.06e-45 170
Msa1440790 AT1G17060.1 33.333 288 165 6 11 278 10 290 7.88e-47 170
Msa1440790 AT1G17060.1 31.206 141 95 2 494 632 150 290 6.68e-18 85.9
Msa1440790 AT3G53130.1 25.245 408 257 11 101 462 126 531 6.69e-25 110
Msa1440790 AT3G53130.1 27.413 259 130 8 608 821 286 531 1.27e-17 87.8
Msa1440790 AT4G15110.1 24.454 458 248 17 87 462 129 570 4.50e-23 105
Msa1440790 AT4G15110.1 24.138 406 207 17 503 821 179 570 1.62e-16 84.3
Msa1440790 AT1G31800.1 23.278 421 272 15 101 474 157 573 1.87e-21 100
Msa1440790 AT1G31800.1 27.751 209 113 8 656 828 362 568 1.05e-14 78.6
Msa1440790 AT3G48310.1 22.642 371 239 8 136 470 121 479 2.23e-21 99.0
Msa1440790 AT3G48310.1 23.034 356 220 8 512 829 140 479 2.98e-20 95.5
Msa1440790 AT5G24910.2 26.190 420 218 15 1 343 1 405 1.91e-19 92.0
Msa1440790 AT5G24910.2 28.723 188 116 5 506 682 173 353 1.33e-13 74.3
Msa1440790 AT4G27710.2 24.921 317 192 9 13 292 3 310 3.88e-18 87.8
Msa1440790 AT4G27710.2 28.934 197 129 5 494 686 152 341 1.15e-14 77.0
Msa1440790 AT3G26125.1 24.188 277 153 7 601 824 255 527 1.46e-17 87.4
Msa1440790 AT3G26125.1 25.668 187 121 3 297 465 341 527 5.10e-17 85.9
Msa1440790 AT4G13310.1 25.140 358 213 10 495 808 127 473 1.77e-17 87.0
Msa1440790 AT4G13310.1 24.768 323 197 10 169 449 155 473 1.35e-14 77.8
Msa1440790 AT3G48300.1 22.561 328 205 7 512 801 137 453 6.75e-17 85.1
Msa1440790 AT3G48300.1 22.029 345 222 9 136 442 118 453 2.35e-16 83.2
Msa1440790 AT3G48300.2 22.561 328 205 7 512 801 139 455 6.82e-17 85.1
Msa1440790 AT3G48300.2 22.029 345 222 9 136 442 120 455 2.37e-16 83.2
Msa1440790 AT1G13140.1 24.878 205 111 3 665 826 317 521 1.15e-16 84.7
Msa1440790 AT1G13140.1 24.309 181 126 3 298 467 341 521 1.20e-15 81.3
Msa1440790 AT1G13140.2 24.878 205 111 3 665 826 291 495 1.23e-16 84.3
Msa1440790 AT1G13140.2 24.309 181 126 3 298 467 315 495 1.33e-15 81.3
Msa1440790 AT1G24540.1 23.381 278 169 5 592 827 243 518 2.33e-16 83.6
Msa1440790 AT1G24540.1 21.127 426 277 13 101 468 94 518 1.89e-15 80.5
Msa1440790 AT4G13290.1 23.596 356 213 9 495 808 128 466 6.73e-16 82.0
Msa1440790 AT4G13290.1 23.975 317 199 8 169 449 156 466 8.55e-15 78.6
Msa1440790 AT4G31500.1 25.816 337 203 11 150 443 134 466 1.27e-15 81.3
Msa1440790 AT4G31500.1 24.638 345 220 11 495 802 125 466 9.02e-13 72.0
Msa1440790 AT2G30770.1 23.876 356 212 9 495 805 128 469 1.41e-15 80.9
Msa1440790 AT2G30770.1 36.220 127 76 4 324 446 344 469 3.27e-14 76.6
Msa1440790 AT2G46950.2 26.404 356 190 15 33 330 89 430 1.55e-15 80.5
Msa1440790 AT2G46950.2 30.323 155 99 3 545 698 260 406 5.79e-13 72.4
Msa1440790 AT1G13150.1 23.106 264 154 5 608 826 255 514 3.33e-15 80.1
Msa1440790 AT1G13150.1 26.190 168 116 3 308 467 347 514 2.29e-14 77.4
Msa1440790 AT2G44890.1 23.153 406 241 14 101 444 85 481 3.84e-15 79.7
Msa1440790 AT2G44890.1 23.316 386 209 14 498 821 140 500 3.24e-12 70.5
Msa1440790 AT3G48280.1 23.256 344 222 8 136 443 119 456 4.35e-15 79.3
Msa1440790 AT3G48280.1 23.100 329 205 6 512 802 138 456 8.04e-15 78.6
Msa1440790 AT3G48290.1 23.529 340 211 7 512 813 141 469 4.92e-15 79.3
Msa1440790 AT3G48290.1 22.841 359 234 8 136 458 122 473 1.74e-14 77.4
Msa1440790 AT1G57750.1 28.000 175 119 3 297 469 326 495 6.23e-15 79.0
Msa1440790 AT1G57750.1 26.064 188 110 4 670 828 308 495 1.55e-11 68.2
Msa1440790 AT3G48270.1 21.813 353 228 7 512 829 139 478 1.16e-14 78.2
Msa1440790 AT3G48270.1 23.699 346 219 9 136 444 120 457 1.62e-14 77.4
Msa1440790 AT2G45510.1 24.318 403 240 14 101 444 85 481 1.94e-14 77.4
Msa1440790 AT3G56630.1 22.967 418 260 17 95 458 75 484 3.62e-14 76.6
Msa1440790 AT5G24950.1 23.324 373 235 11 117 444 99 465 1.91e-13 74.3
Msa1440790 AT5G24950.1 22.849 337 208 8 510 803 138 465 1.71e-12 71.2
Msa1440790 AT3G20935.1 31.707 164 105 3 300 457 157 319 2.75e-13 72.8
Msa1440790 AT4G12320.1 33.758 157 94 7 298 448 334 486 3.31e-13 73.6
Msa1440790 AT5G63450.1 23.242 327 174 13 530 798 164 471 4.03e-13 73.2
Msa1440790 AT5G63450.2 23.242 327 174 13 530 798 222 529 5.20e-13 73.2
Msa1440790 AT3G48290.2 22.006 359 219 7 512 813 141 495 5.72e-13 72.8
Msa1440790 AT3G48290.2 23.037 382 231 10 136 458 122 499 2.99e-12 70.5
Msa1440790 AT5G07990.1 23.858 394 241 13 104 444 84 471 5.81e-13 72.8
Msa1440790 AT3G20950.1 31.548 168 102 4 300 458 335 498 6.21e-13 72.8
Msa1440790 AT3G20950.1 25.559 313 179 11 547 816 196 497 7.65e-12 69.3
Msa1440790 AT4G12300.1 31.373 153 99 5 300 448 334 484 6.73e-13 72.4
Msa1440790 AT4G37340.1 25.564 399 233 17 124 476 106 486 9.54e-13 72.0
Msa1440790 AT4G39500.1 26.036 169 122 3 304 469 297 465 1.38e-12 71.2
Msa1440790 AT4G12310.1 33.696 184 103 9 300 477 338 508 1.45e-12 71.6
Msa1440790 AT3G48320.1 22.000 350 226 8 158 470 140 479 1.78e-12 71.2
Msa1440790 AT4G39500.2 26.036 169 122 3 304 469 347 515 1.88e-12 71.2
Msa1440790 AT3G25180.1 27.148 291 158 10 552 800 197 475 1.92e-12 71.2
Msa1440790 AT3G25180.1 35.294 119 75 2 324 441 358 475 2.25e-12 70.9
Msa1440790 AT1G11610.1 23.362 351 216 9 495 804 128 466 2.99e-12 70.5
Msa1440790 AT1G11610.1 23.875 289 182 6 194 445 179 466 2.75e-11 67.4
Msa1440790 AT1G11610.2 23.362 351 216 9 495 804 128 466 3.10e-12 70.5
Msa1440790 AT1G11610.2 23.875 289 182 6 194 445 179 466 2.80e-11 67.4
Msa1440790 AT1G11680.1 24.615 325 209 10 149 443 140 458 4.59e-12 69.7
Msa1440790 AT4G13770.1 23.511 319 184 10 178 446 161 469 5.82e-12 69.7
Msa1440790 AT4G22710.1 34.247 146 91 4 300 442 344 487 6.21e-12 69.3
Msa1440790 AT3G20120.2 28.662 157 105 3 300 450 194 349 6.30e-12 68.6
Msa1440790 AT3G20120.2 29.839 124 79 3 692 809 228 349 3.39e-11 66.6
Msa1440790 AT3G20120.3 28.662 157 105 3 300 450 194 349 6.30e-12 68.6
Msa1440790 AT3G20120.3 29.839 124 79 3 692 809 228 349 3.39e-11 66.6
Msa1440790 AT3G20120.1 28.662 157 105 3 300 450 194 349 6.30e-12 68.6
Msa1440790 AT3G20120.1 29.839 124 79 3 692 809 228 349 3.39e-11 66.6
Msa1440790 AT3G26210.1 31.333 150 97 4 298 443 321 468 6.39e-12 69.3
Msa1440790 AT4G22690.1 34.247 146 91 4 300 442 375 518 6.55e-12 69.7
Msa1440790 AT4G37400.1 25.140 358 217 14 126 442 112 459 7.81e-12 68.9
Msa1440790 AT3G10560.1 24.051 237 144 6 244 445 249 484 8.94e-12 68.9
Msa1440790 AT1G69500.1 30.882 136 79 3 320 447 372 500 9.55e-12 68.9
Msa1440790 AT1G69500.1 30.534 131 76 3 684 806 377 500 5.27e-11 66.6
Msa1440790 AT3G20120.4 28.662 157 105 3 300 450 330 485 1.49e-11 68.2
Msa1440790 AT3G20120.4 23.000 300 177 10 555 809 195 485 5.83e-11 66.2
Msa1440790 AT5G25900.1 29.730 148 102 2 297 443 333 479 1.57e-11 68.2
Msa1440790 AT1G63710.1 29.927 137 95 1 693 828 370 506 1.92e-11 67.8
Msa1440790 AT1G63710.1 28.188 149 106 1 322 469 358 506 7.77e-11 65.9
Msa1440790 AT5G25140.1 28.351 194 125 5 262 443 270 461 3.13e-11 67.0
Msa1440790 AT5G10600.1 33.333 123 78 3 321 442 357 476 3.36e-11 67.0
Msa1440790 AT2G26170.1 27.706 231 147 9 230 444 267 493 3.43e-11 67.0
Msa1440790 AT3G20940.1 29.586 169 108 4 300 458 332 499 4.09e-11 67.0
Msa1440790 AT1G28430.1 24.380 242 147 6 244 450 244 484 4.41e-11 66.6
Msa1440790 AT4G00360.1 23.162 272 148 7 607 828 250 510 4.89e-11 66.6
Msa1440790 AT2G26170.2 27.706 231 147 9 230 444 184 410 5.20e-11 66.2
Msa1440790 AT2G26170.2 34.783 115 69 4 692 803 299 410 8.80e-11 65.5
Msa1440790 AT5G24960.1 23.208 293 175 8 551 802 182 465 5.67e-11 66.2
Msa1440790 AT5G52320.2 24.405 168 123 3 297 462 329 494 5.97e-11 66.2
Msa1440790 AT4G15380.1 27.692 130 88 2 692 816 361 489 7.55e-11 65.9
Msa1440790 AT5G10610.1 33.871 124 76 5 321 442 341 460 7.60e-11 65.9
Msa1440790 AT4G12330.1 28.966 145 100 3 301 443 338 481 8.32e-11 65.9
Msa1440790 AT4G37360.1 34.694 147 84 6 300 442 320 458 8.87e-11 65.9
Msa1440790 AT2G30750.1 25.083 303 166 9 550 805 181 469 9.06e-11 65.9

Find 190 sgRNAs with CRISPR-Local

Find 807 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTTCGTTGTTTGGATTT+TGG 0.138068 tig0029124:-40675 None:intergenic
TGGACAAAACTTTGCCTTAT+TGG 0.175846 tig0029124:+48943 Msa1440790:CDS
ATTCCTTCAGCGAACCTTTC+AGG 0.192629 tig0029124:-41318 None:intergenic
CTGGTATGAGTTTATGAATT+TGG 0.205577 tig0029124:+49207 Msa1440790:three_prime_UTR
ATTCCTTCAGCAAACCTTTC+AGG 0.207866 tig0029124:-48857 None:intergenic
CTTGCACGTGCTTGCCATTC+AGG 0.213169 tig0029124:-40625 None:intergenic
CCACTTCAAGTTTGCTGGTT+TGG 0.224385 tig0029124:+48060 Msa1440790:CDS
CAGGGCACTGTTGTCATTAA+AGG 0.230559 tig0029124:+49318 Msa1440790:three_prime_UTR
GATAGATGGTGCAGCTTCTT+TGG 0.233617 tig0029124:-36502 None:intergenic
ATATAACCTCTCAGTATTAA+TGG 0.242946 tig0029124:+36413 Msa1440790:CDS
CGCTATCTTTGCTTCCAATA+AGG 0.245543 tig0029124:-48957 None:intergenic
CTTCGAAAGGATTTGAAACT+TGG 0.251334 tig0029124:+41198 Msa1440790:CDS
CTTCGAAAGGATTTGAAACT+TGG 0.251334 tig0029124:+48737 Msa1440790:CDS
TACAGACGAACAATTCATTA+TGG 0.262767 tig0029124:+39903 Msa1440790:CDS
GACAGACGAACAATCCATTA+TGG 0.275417 tig0029124:+47220 Msa1440790:CDS
GTAGGAACATGCACATAATT+TGG 0.278270 tig0029124:-41480 None:intergenic
CGATTTATTAGGCATTCTTT+TGG 0.281596 tig0029124:+40448 Msa1440790:CDS
CAAGTTTCTTATTTCCCTTT+TGG 0.282411 tig0029124:+48899 Msa1440790:CDS
GTAGGAACATGCACATAATT+TGG 0.286605 tig0029124:-49019 None:intergenic
CGAAGATGAAAGAAGTTGAT+AGG 0.289553 tig0029124:+40351 Msa1440790:CDS
AAAGTTTGTTATTTCCCTTT+TGG 0.301951 tig0029124:+41360 Msa1440790:CDS
TTTGTTCAATATAAAGCTTC+AGG 0.304991 tig0029124:-49350 None:intergenic
TTCACCAAGATCATGATCTA+TGG 0.306998 tig0029124:+41271 Msa1440790:CDS
TTCACCAAGATCATGATCTA+TGG 0.306998 tig0029124:+48810 Msa1440790:CDS
AGAAGTTTCTCAAACCTCTT+TGG 0.308609 tig0029124:-36363 None:intergenic
CCTAAAACTGATCATGTTCC+AGG 0.316538 tig0029124:+49299 Msa1440790:three_prime_UTR
CCCACCAATGACGATTTATT+AGG 0.317416 tig0029124:+47918 Msa1440790:CDS
TGACTTAATCCTTCGTTGTT+TGG 0.324270 tig0029124:-40682 None:intergenic
GCTCGGTTGAAGTAAATTAA+AGG 0.325834 tig0029124:-41174 None:intergenic
CACAGACCCTGATCAAATTA+AGG 0.326883 tig0029124:+39425 Msa1440790:intron
ATTAATACTGAGAGGTTATA+TGG 0.328314 tig0029124:-36411 None:intergenic
ACCACCAATGACGATTTATT+AGG 0.328413 tig0029124:+40437 Msa1440790:CDS
GCTCGGTTGAAGTAAATTAA+TGG 0.331082 tig0029124:-48713 None:intergenic
AAACAAGCCAACCATAATAT+TGG 0.335331 tig0029124:-49242 None:intergenic
CATCAAACTGTACACAAATA+TGG 0.339807 tig0029124:+36537 Msa1440790:CDS
AATACTTCCTTAATTTGATC+AGG 0.340790 tig0029124:-39432 None:intergenic
GTCATTTCTCGGACAGCATT+TGG 0.353207 tig0029124:+39809 Msa1440790:CDS
AGAGACCACTTCAAGTTTGC+TGG 0.353368 tig0029124:+48055 Msa1440790:CDS
GTAATTTCTCGGACGGCATT+TGG 0.358770 tig0029124:+47126 Msa1440790:CDS
TGCATTCATCTATCACATCT+TGG 0.361456 tig0029124:-48010 None:intergenic
AGGGAAATTTGTGTTCCTTC+AGG 0.362634 tig0029124:-41234 None:intergenic
AGGGAAATTTGTGTTCCTTC+AGG 0.362634 tig0029124:-48773 None:intergenic
TGCTATCTTTGCTTCTAGTA+AGG 0.374120 tig0029124:-41418 None:intergenic
TTATGAATTAATGTTGAGTT+TGG 0.378265 tig0029124:+49263 Msa1440790:three_prime_UTR
CGTTGGTATTATAGATTATG+AGG 0.380014 tig0029124:+39512 Msa1440790:CDS
TGGTTTGGAATGGTGTTATT+AGG 0.391151 tig0029124:+48075 Msa1440790:CDS
ATGGAAATAGTAAGAGTATT+GGG 0.392073 tig0029124:+47979 Msa1440790:CDS
GCATTCATCTATCACATCTT+GGG 0.398977 tig0029124:-48009 None:intergenic
TTACCTGTGATGTCATTTCT+CGG 0.413891 tig0029124:+39798 Msa1440790:CDS
TTACCTGTGATGTAATTTCT+CGG 0.413891 tig0029124:+47115 Msa1440790:CDS
AGGGCACTGTTGTCATTAAA+GGG 0.418395 tig0029124:+49319 Msa1440790:three_prime_UTR
TTGGAATGGTGTTATTAGGC+AGG 0.424221 tig0029124:+48079 Msa1440790:CDS
TAGATTATGAGGGTAAGAAA+TGG 0.430325 tig0029124:+39523 Msa1440790:CDS
GAAGATAAATCTAAATTCAT+TGG 0.432400 tig0029124:+36474 Msa1440790:CDS
ATCCAATGTAGTTACTTAGT+AGG 0.435557 tig0029124:+49108 Msa1440790:three_prime_UTR
ACAGACGAACAATCCATTAT+GGG 0.436872 tig0029124:+47221 Msa1440790:CDS
CGCCCCATAGATCATGATCT+TGG 0.442269 tig0029124:-41275 None:intergenic
CGCCCCATAGATCATGATCT+TGG 0.442269 tig0029124:-48814 None:intergenic
ACAGACGAACAATTCATTAT+GGG 0.446465 tig0029124:+39904 Msa1440790:CDS
GAAATCCATGATTCACTTGA+GGG 0.448417 tig0029124:+47855 Msa1440790:CDS
TTCTAGGTGGAATGCTGGAT+TGG 0.449589 tig0029124:-39565 None:intergenic
CATGGAAATAGTAAGAGTAT+TGG 0.450292 tig0029124:+47978 Msa1440790:CDS
GGTATCTGCTCAACAAGTTA+TGG 0.455061 tig0029124:+36334 Msa1440790:CDS
GGTATCTGCTCAACAAGTTA+TGG 0.455061 tig0029124:+45092 Msa1440790:CDS
AGATTATGAGGGTAAGAAAT+GGG 0.455390 tig0029124:+39524 Msa1440790:CDS
TTCTACTTGCTGTGATTCCA+TGG 0.455889 tig0029124:+36313 Msa1440790:CDS
TTCTACTTGCTGTGATTCCA+TGG 0.455889 tig0029124:+45071 Msa1440790:CDS
GAACATGTGAGCTTGATGTT+TGG 0.456813 tig0029124:+39759 Msa1440790:CDS
GAAATCCATGATTCACTTGA+GGG 0.458000 tig0029124:+40374 Msa1440790:CDS
ATTTCAACTTCTAAAGAAGC+AGG 0.461270 tig0029124:+39859 Msa1440790:CDS
ATTTCAACTTCTAAAGAAGC+AGG 0.461270 tig0029124:+47176 Msa1440790:CDS
GAAGCTTTATATTGAACAAA+GGG 0.463466 tig0029124:+49353 Msa1440790:three_prime_UTR
AACTTCTTTCATCTTCGTCT+TGG 0.464032 tig0029124:-40345 None:intergenic
AATACCAACGCTCAAATACT+TGG 0.464632 tig0029124:-39499 None:intergenic
AATGCCTAATAAATCGTCAT+TGG 0.466874 tig0029124:-40441 None:intergenic
AATGCCTAATAAATCGTCAT+TGG 0.466874 tig0029124:-47922 None:intergenic
GAAGATGAAAGAAGTTGATA+GGG 0.467352 tig0029124:+40352 Msa1440790:CDS
GAGAAGTTTCTCAAACACTT+TGG 0.469731 tig0029124:-45121 None:intergenic
GTGTTCCTTCAGGTAGCAAA+AGG 0.470069 tig0029124:-48763 None:intergenic
ATTCTAGGACCCCATCCAAA+AGG 0.472390 tig0029124:-41375 None:intergenic
ATTCTAGGACCCCATCCAAA+AGG 0.472390 tig0029124:-48914 None:intergenic
AATTTCTTTCATCTTCGTCT+TGG 0.483157 tig0029124:-47826 None:intergenic
GAGAAACTTCTCAAAGCTCA+AGG 0.488786 tig0029124:+36375 Msa1440790:CDS
GAGAAACTTCTCAAAGCTCA+AGG 0.488786 tig0029124:+45132 Msa1440790:CDS
TCACCAAGATCATGATCTAT+GGG 0.491287 tig0029124:+41272 Msa1440790:CDS
TCACCAAGATCATGATCTAT+GGG 0.491287 tig0029124:+48811 Msa1440790:CDS
GAACATGTGAGATTGATGTT+TGG 0.493468 tig0029124:+47076 Msa1440790:CDS
ATGGCAAGCACGTGCAAGGC+AGG 0.495531 tig0029124:+40630 Msa1440790:CDS
GCCTAATAAATCGTCATTGG+TGG 0.507453 tig0029124:-40438 None:intergenic
TGCTTTATGTAAGAAACCAC+TGG 0.508917 tig0029124:+49188 Msa1440790:three_prime_UTR
GGAATTGCGAAGGCAACAAA+AGG 0.510029 tig0029124:+48875 Msa1440790:CDS
TGATTCCCTCAAGTGAATCA+TGG 0.511535 tig0029124:-47860 None:intergenic
GCCTAATAAATCGTCATTGG+TGG 0.518125 tig0029124:-47919 None:intergenic
GCAATGAAATGATAAGCAAA+TGG 0.519697 tig0029124:+39714 Msa1440790:CDS
GCAATGAAATGATAAGCAAA+TGG 0.519697 tig0029124:+47031 Msa1440790:CDS
ATACTTCCTTAATTTGATCA+GGG 0.523179 tig0029124:-39431 None:intergenic
TCAAATCCTTTCGAAGAGCT+CGG 0.524359 tig0029124:-41191 None:intergenic
TCAAATCCTTTCGAAGAGCT+CGG 0.524359 tig0029124:-48730 None:intergenic
TGGGGTCCTAGAATTTGTCT+TGG 0.524368 tig0029124:+41384 Msa1440790:CDS
TGGGGTCCTAGAATTTGTCT+TGG 0.524368 tig0029124:+48923 Msa1440790:CDS
GGTGAATCAATAGTATTGGT+AGG 0.525302 tig0029124:-41254 None:intergenic
GGTGAATCAATAGTATTGGT+AGG 0.525302 tig0029124:-48793 None:intergenic
TATCATTTCATTGCAACTGT+GGG 0.526127 tig0029124:-47022 None:intergenic
TAATTCCCTCAAGTGAATCA+TGG 0.526380 tig0029124:-40379 None:intergenic
TCAAGTTTGCTGGTTTGGAA+TGG 0.531465 tig0029124:+48065 Msa1440790:CDS
ATCGCCAAGTATTTGAGCGT+TGG 0.535266 tig0029124:+39495 Msa1440790:CDS
GGAATTGCGATGGCTACAAA+AGG 0.536596 tig0029124:+41336 Msa1440790:CDS
TTCTAGGACCCCATCCAAAA+GGG 0.541031 tig0029124:-41374 None:intergenic
TTCTAGGACCCCATCCAAAA+GGG 0.541031 tig0029124:-48913 None:intergenic
AGTTATGGCTTAAGCCAAAG+AGG 0.541836 tig0029124:+36349 Msa1440790:CDS
CAGGTAAAATTCTGAAGGAA+AGG 0.542981 tig0029124:-39782 None:intergenic
CAGGTAAAATTCTGAAGGAA+AGG 0.542981 tig0029124:-47099 None:intergenic
TGAACATGAGTGAAGATAGA+TGG 0.546292 tig0029124:-36516 None:intergenic
CTGTGATGTAATTTCTCGGA+CGG 0.552059 tig0029124:+47119 Msa1440790:CDS
TTGCAACTGTGGGAGAATGC+AGG 0.552474 tig0029124:-47012 None:intergenic
TGAAGCTTTATATTGAACAA+AGG 0.553483 tig0029124:+49352 Msa1440790:three_prime_UTR
CATGCTGAAAGTCAAGGACA+TGG 0.554602 tig0029124:+47960 Msa1440790:CDS
GTGAATCAATAGTATTGGTA+GGG 0.556861 tig0029124:-41253 None:intergenic
GTGAATCAATAGTATTGGTA+GGG 0.556861 tig0029124:-48792 None:intergenic
TAGTACCTCGTACAAAATCA+TGG 0.557033 tig0029124:-41139 None:intergenic
TAGTACCTCGTACAAAATCA+TGG 0.557033 tig0029124:-48678 None:intergenic
CCAAACCAGCAAACTTGAAG+TGG 0.558609 tig0029124:-48060 None:intergenic
GGAAGTGTTTGTGTTTCCCA+CGG 0.560424 tig0029124:+36260 Msa1440790:CDS
GTAAGAAATGGGCTAAACAT+AGG 0.561988 tig0029124:+39535 Msa1440790:CDS
AAGGAATTATTGTCATCAGA+TGG 0.562183 tig0029124:+39737 Msa1440790:CDS
AAGGAATTATTGTCATCAGA+TGG 0.562183 tig0029124:+47054 Msa1440790:CDS
CAAAGGAGTTCAAACCTGAA+AGG 0.562405 tig0029124:+48843 Msa1440790:CDS
AATTTGTGTTCCTTCAGGTA+GGG 0.563566 tig0029124:-41229 None:intergenic
TTTCAACTTCTAAAGAAGCA+GGG 0.563861 tig0029124:+39860 Msa1440790:CDS
TTTCAACTTCTAAAGAAGCA+GGG 0.563861 tig0029124:+47177 Msa1440790:CDS
TGAAATGATAAGCAAATGGA+AGG 0.570273 tig0029124:+39718 Msa1440790:CDS
TGAAATGATAAGCAAATGGA+AGG 0.570273 tig0029124:+47035 Msa1440790:CDS
ATGATTATTGTTGTTCCCGT+GGG 0.571852 tig0029124:-36276 None:intergenic
CAGACGAACAATTCATTATG+GGG 0.574057 tig0029124:+39905 Msa1440790:CDS
CCTAATAAATCGTCATTGGT+GGG 0.574203 tig0029124:-47918 None:intergenic
CGTCCGAGAAATTACATCAC+AGG 0.574347 tig0029124:-47118 None:intergenic
TCTTGGTGAATCAATAGTAT+TGG 0.575688 tig0029124:-41258 None:intergenic
TCTTGGTGAATCAATAGTAT+TGG 0.575688 tig0029124:-48797 None:intergenic
AAACCTGAAAGGTTTGCTGA+AGG 0.575833 tig0029124:+48854 Msa1440790:CDS
AACGCTCAAATACTTGGCGA+TGG 0.576440 tig0029124:-39493 None:intergenic
CTGAATGGCAAGCACGTGCA+AGG 0.579670 tig0029124:+40626 Msa1440790:CDS
GTTGGTATTATAGATTATGA+GGG 0.580675 tig0029124:+39513 Msa1440790:CDS
CAGACGAACAATCCATTATG+GGG 0.584523 tig0029124:+47222 Msa1440790:CDS
TATTAGGCAGGTATCCTGAA+TGG 0.584815 tig0029124:+40611 Msa1440790:intron
CATCACAGGTAAAATTCTGA+AGG 0.585883 tig0029124:-47104 None:intergenic
GGAAATCCATGATTCACTTG+AGG 0.587215 tig0029124:+40373 Msa1440790:CDS
AGAAATCCATGATTCACTTG+AGG 0.587215 tig0029124:+47854 Msa1440790:CDS
CTTCAACCGAGCTCTTCGAA+AGG 0.588376 tig0029124:+41185 Msa1440790:CDS
CTTCAACCGAGCTCTTCGAA+AGG 0.588376 tig0029124:+48724 Msa1440790:CDS
CTTTAATGACAACAGTGCCC+TGG 0.589464 tig0029124:-49317 None:intergenic
GGTTGAAGTAAATTAATGGT+GGG 0.591756 tig0029124:-48709 None:intergenic
TTGCAACTGTGAGAAAATGC+AGG 0.593738 tig0029124:-39695 None:intergenic
AAATTTGTGTTCCTTCAGGT+AGG 0.596151 tig0029124:-41230 None:intergenic
CATCACAGGTAAAATTCTGA+AGG 0.596372 tig0029124:-39787 None:intergenic
GAAGTGTTTGTGTTTCCCAC+GGG 0.597452 tig0029124:+36261 Msa1440790:CDS
CGGTTGAAGTAAATTAAAGG+TGG 0.600683 tig0029124:-41171 None:intergenic
CGGTTGAAGTAAATTAATGG+TGG 0.601352 tig0029124:-48710 None:intergenic
AAACCTGAAAGGTTCGCTGA+AGG 0.604422 tig0029124:+41315 Msa1440790:CDS
GTTTGCTGAAGGAATTGCGA+AGG 0.605171 tig0029124:+48865 Msa1440790:CDS
CTAAAACTGATCATGTTCCA+GGG 0.605514 tig0029124:+49300 Msa1440790:three_prime_UTR
GATGATTATTGTTGTTCCCG+TGG 0.609370 tig0029124:-36277 None:intergenic
CAAAGGAGTTCAAACCTGAA+AGG 0.610486 tig0029124:+41304 Msa1440790:CDS
TTATCATTTCATTGCAACTG+TGG 0.610505 tig0029124:-47023 None:intergenic
TCAAATCATGCTGAAAGTCA+AGG 0.615940 tig0029124:+47954 Msa1440790:CDS
GGTTGAAGTAAATTAAAGGT+GGG 0.617930 tig0029124:-41170 None:intergenic
TTTGGAAGCAGCTACGCAGA+AGG 0.619232 tig0029124:+39827 Msa1440790:CDS
TTTGGAAGCAGCTACGCAGA+AGG 0.619232 tig0029124:+47144 Msa1440790:CDS
GGAAGTATTTAACAAGATCG+AGG 0.623450 tig0029124:+39446 Msa1440790:CDS
AACTTGTTGAGCAGATACCA+TGG 0.627560 tig0029124:-36330 None:intergenic
AACTTGTTGAGCAGATACCA+TGG 0.627560 tig0029124:-45088 None:intergenic
TTCATCTATCACATCTTGGG+TGG 0.627681 tig0029124:-48006 None:intergenic
AACCTACTAAGTAACTACAT+TGG 0.628288 tig0029124:-49110 None:intergenic
AAGTGGTCTCTTGCCCAGCA+AGG 0.631828 tig0029124:-48043 None:intergenic
TCTATGGGGCGATGATGCAA+AGG 0.632954 tig0029124:+41287 Msa1440790:CDS
TCTATGGGGCGATGATGCAA+AGG 0.632954 tig0029124:+48826 Msa1440790:CDS
ATTTGTCCATTAATACTGAG+AGG 0.635679 tig0029124:-36419 None:intergenic
TGTCCGAGAAATGACATCAC+AGG 0.636037 tig0029124:-39801 None:intergenic
AATTCATAAACTCATACCAG+TGG 0.638570 tig0029124:-49204 None:intergenic
GTTCGCTGAAGGAATTGCGA+TGG 0.641753 tig0029124:+41326 Msa1440790:CDS
TGCAAAGTAAGCACCGTGGT+AGG 0.649814 tig0029124:-49037 None:intergenic
GGAAACGTTTCCCTACCTGA+AGG 0.655755 tig0029124:+41219 Msa1440790:CDS
AACCAAAATCCAAACAACGA+AGG 0.674900 tig0029124:+40673 Msa1440790:CDS
CACCAAGATCATGATCTATG+GGG 0.688797 tig0029124:+41273 Msa1440790:CDS
CACCAAGATCATGATCTATG+GGG 0.688797 tig0029124:+48812 Msa1440790:CDS
TTATGTGCATGTTCCTACCA+CGG 0.692580 tig0029124:+49024 Msa1440790:CDS
AGACGAACAATTCATTATGG+GGG 0.699580 tig0029124:+39906 Msa1440790:CDS
GTCAAAGTAAGCACAGTGGT+AGG 0.702325 tig0029124:-41498 None:intergenic
AGACGAACAATCCATTATGG+GGG 0.719567 tig0029124:+47223 Msa1440790:CDS
TGGCGTCAAAGTAAGCACAG+TGG 0.783736 tig0029124:-41502 None:intergenic
TGGCTGCAAAGTAAGCACCG+TGG 0.795736 tig0029124:-49041 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTATATATTAAAAAAA+AGG + tig0029124:36935-36954 Msa1440790:intron 0.0%
!!! TATATTTATATTTTAAAAAT+AGG + tig0029124:45777-45796 Msa1440790:intron 0.0%
!!! ATATTTATATTTTAAAAATA+GGG + tig0029124:45778-45797 Msa1440790:intron 0.0%
!!! TTTTTTTAATGAAAAATTGT+TGG + tig0029124:36800-36819 Msa1440790:intron 10.0%
!!! TTGTTATTTTAGTTTTTTAA+CGG - tig0029124:38413-38432 None:intergenic 10.0%
!!! ATAATTGTTTTTGTTTTTAT+AGG + tig0029124:41113-41132 Msa1440790:intron 10.0%
!!! AACAAAAATTTTTTTTTAGT+TGG + tig0029124:41722-41741 Msa1440790:intron 10.0%
!! ATTGAATAATTTATTGTAAT+CGG + tig0029124:42250-42269 Msa1440790:intron 10.0%
!! TTTATAATAACAAAAATTGA+TGG - tig0029124:42416-42435 None:intergenic 10.0%
!! TTTAAGAAATTCATAATTAT+GGG - tig0029124:43072-43091 None:intergenic 10.0%
!!! AATTAAAAAATTTTCAACTA+AGG - tig0029124:43431-43450 None:intergenic 10.0%
!! TAAAATAAGTTAATTCAAAT+GGG - tig0029124:43690-43709 None:intergenic 10.0%
!!! GAATAATTTTAATTGAATTT+GGG - tig0029124:44161-44180 None:intergenic 10.0%
!!! TGAATAATTTTAATTGAATT+TGG - tig0029124:44162-44181 None:intergenic 10.0%
!!! TAAGTTTTTTTTTGATTTAA+TGG - tig0029124:44693-44712 None:intergenic 10.0%
!!! GAAATTTTAATTTTACAATA+AGG + tig0029124:44853-44872 Msa1440790:intron 10.0%
!!! AATAAATAAGAGTATAATAA+TGG + tig0029124:45531-45550 Msa1440790:intron 10.0%
!!! CTTTTAAAATTTCAATTAAA+AGG + tig0029124:45666-45685 Msa1440790:intron 10.0%
!!! TTTAAAATTTCAATTAAAAG+GGG + tig0029124:45668-45687 Msa1440790:intron 10.0%
!!! TAAAAATCCATAAATATTTT+TGG - tig0029124:45992-46011 None:intergenic 10.0%
!! TTCCAATACAAAAAAAAATA+TGG + tig0029124:36239-36258 Msa1440790:exon 15.0%
!!! TTCCATATTTTTTTTTGTAT+TGG - tig0029124:36244-36263 None:intergenic 15.0%
!!! TTTTGAAACTTCAATTTAAA+AGG + tig0029124:36828-36847 Msa1440790:intron 15.0%
!!! TTTGAAACTTCAATTTAAAA+GGG + tig0029124:36829-36848 Msa1440790:intron 15.0%
!!! AAAAAAAGTTAATGTTTTGT+GGG - tig0029124:37601-37620 None:intergenic 15.0%
!!! AAAAAAAAGTTAATGTTTTG+TGG - tig0029124:37602-37621 None:intergenic 15.0%
!! TCAATAAAAATTAATGTATC+TGG + tig0029124:37715-37734 Msa1440790:intron 15.0%
!!! TTTATTGATTAATAAAGCAA+CGG + tig0029124:37984-38003 Msa1440790:intron 15.0%
!! ATAGTAACATAATAATCAAA+AGG + tig0029124:38796-38815 Msa1440790:intron 15.0%
!! AAGAATATAATGATTGATTA+TGG - tig0029124:39297-39316 None:intergenic 15.0%
!! TTATCTGTTTATTTATAGTT+TGG + tig0029124:39327-39346 Msa1440790:intron 15.0%
!!! ATGACTACAATATATTATTT+TGG + tig0029124:39930-39949 Msa1440790:intron 15.0%
!! AAAATTTAGAGATCTTTATT+AGG + tig0029124:41789-41808 Msa1440790:intron 15.0%
!!! TCATTTTATTTTATCATACA+TGG - tig0029124:41871-41890 None:intergenic 15.0%
!! TATGATAAAATAAAATGACA+GGG + tig0029124:41873-41892 Msa1440790:intron 15.0%
!!! TTTTTTTTTGAAGAATGAAA+TGG + tig0029124:42038-42057 Msa1440790:intron 15.0%
!! AAAACCAAGAAATAAAAATT+TGG + tig0029124:42671-42690 Msa1440790:intron 15.0%
!! GTTTAAGAAATTCATAATTA+TGG - tig0029124:43073-43092 None:intergenic 15.0%
!!! ACTCCAAAATTTAATTTTAA+TGG + tig0029124:43124-43143 Msa1440790:intron 15.0%
!!! TCACCATTAAAATTAAATTT+TGG - tig0029124:43130-43149 None:intergenic 15.0%
!! CTAAAATAAGTTAATTCAAA+TGG - tig0029124:43691-43710 None:intergenic 15.0%
!! AATAAGATATTAAATGACTA+AGG + tig0029124:43885-43904 Msa1440790:intron 15.0%
!! AAAATATAAAAGCAAAGTTT+GGG - tig0029124:44626-44645 None:intergenic 15.0%
!! AAAAATATAAAAGCAAAGTT+TGG - tig0029124:44627-44646 None:intergenic 15.0%
!!! TTTTTTTGATTTAATGGATT+TGG - tig0029124:44687-44706 None:intergenic 15.0%
!! AAAAGGTCATTAAATATTTA+AGG - tig0029124:44953-44972 None:intergenic 15.0%
!! TTAAAGACTATAATTTAGAA+AGG - tig0029124:45399-45418 None:intergenic 15.0%
!! TTTCTAAATTATAGTCTTTA+AGG + tig0029124:45398-45417 Msa1440790:intron 15.0%
!! TACATTTCCAAAAATATTTA+TGG + tig0029124:45982-46001 Msa1440790:intron 15.0%
!!! ATGACTACAATATATTATTT+TGG + tig0029124:39930-39949 Msa1440790:intron 15.0%
!!! TAATAATACATAATCCTTTT+TGG + tig0029124:48620-48639 Msa1440790:intron 15.0%
!!! ATTTTTTTTTGTATTGGAAG+TGG - tig0029124:36238-36257 None:intergenic 20.0%
!! GAAGATAAATCTAAATTCAT+TGG + tig0029124:36474-36493 Msa1440790:CDS 20.0%
!! TTCATTTAATGTTAGATCTT+TGG - tig0029124:36645-36664 None:intergenic 20.0%
!! TTGAAACTTCAATTTAAAAG+GGG + tig0029124:36830-36849 Msa1440790:intron 20.0%
!! TTATTCCTCTCAAAAAAAAA+AGG - tig0029124:37041-37060 None:intergenic 20.0%
!! TTCCAATGTTGAAATATAAT+CGG + tig0029124:37558-37577 Msa1440790:intron 20.0%
!!! TATGTTAGTTAATGTTTTGT+GGG - tig0029124:37659-37678 None:intergenic 20.0%
!! TGTGTAAAATAAATATACAC+CGG + tig0029124:37910-37929 Msa1440790:intron 20.0%
!!! TTATTGATTAATAAAGCAAC+GGG + tig0029124:37985-38004 Msa1440790:intron 20.0%
!! TGGTTAATGATACTAAAAAA+AGG + tig0029124:38034-38053 Msa1440790:intron 20.0%
!! TTAGTAATAATTTCCTTTCT+TGG + tig0029124:38125-38144 Msa1440790:intron 20.0%
!! CAACTTAAAAGCAAATATAT+AGG + tig0029124:38215-38234 Msa1440790:intron 20.0%
!!! TTTATTTATAGTTTGGTTTG+CGG + tig0029124:39334-39353 Msa1440790:intron 20.0%
!!! TGGATTTTAATATTGGTTTA+GGG - tig0029124:39476-39495 None:intergenic 20.0%
!!! ATGGATTTTAATATTGGTTT+AGG - tig0029124:39477-39496 None:intergenic 20.0%
!! TATGATTTACTTCAAACAAT+AGG + tig0029124:39664-39683 Msa1440790:intron 20.0%
!! ATGATTTACTTCAAACAATA+GGG + tig0029124:39665-39684 Msa1440790:intron 20.0%
!!! ATTGAAAGTATATTCTAGTT+TGG + tig0029124:39964-39983 Msa1440790:intron 20.0%
!! TGCATTATTATTTGTTTACA+AGG + tig0029124:39997-40016 Msa1440790:intron 20.0%
!! ATTATCAGATAGTATCAAAA+AGG - tig0029124:41098-41117 None:intergenic 20.0%
!! GTATGATAAAATAAAATGAC+AGG + tig0029124:41872-41891 Msa1440790:intron 20.0%
!! CAGATTAAACTATCAAAAAT+TGG + tig0029124:42623-42642 Msa1440790:intron 20.0%
!!! ACTACCAAATTTTTATTTCT+TGG - tig0029124:42678-42697 None:intergenic 20.0%
!! CATTATCACATATACTTTAA+AGG - tig0029124:42813-42832 None:intergenic 20.0%
!!! AAAAAATTTGTTTTTCAGAC+TGG + tig0029124:43020-43039 Msa1440790:intron 20.0%
!!! AAAAATTTGTTTTTCAGACT+GGG + tig0029124:43021-43040 Msa1440790:intron 20.0%
!! ATCTATAGATATACAGAAAA+AGG - tig0029124:43310-43329 None:intergenic 20.0%
!!! GATTATTTTCAAGTATGTTT+AGG - tig0029124:43482-43501 None:intergenic 20.0%
!! AAAGTTTGTACAGAAAAAAT+GGG - tig0029124:43633-43652 None:intergenic 20.0%
!! TTAAAAAGTGACACTTAAAA+AGG + tig0029124:43982-44001 Msa1440790:intron 20.0%
!!! AAAAATGAGAAGGATAATTT+TGG - tig0029124:44190-44209 None:intergenic 20.0%
!! TAAGAAAAACTTATATGCTT+TGG - tig0029124:44481-44500 None:intergenic 20.0%
!! AGAAAAACAAAATCAACAAT+GGG - tig0029124:44513-44532 None:intergenic 20.0%
!! AAGAAAAACAAAATCAACAA+TGG - tig0029124:44514-44533 None:intergenic 20.0%
!! TGGGAAATAAACAAAATTAA+GGG - tig0029124:44607-44626 None:intergenic 20.0%
!! TTGGGAAATAAACAAAATTA+AGG - tig0029124:44608-44627 None:intergenic 20.0%
!!! AATTCTAGCTTTTAATTGTT+CGG - tig0029124:44659-44678 None:intergenic 20.0%
!! AAAACAATGTAGAGATAAAA+AGG + tig0029124:44781-44800 Msa1440790:intron 20.0%
!!! ATTTTACAATAAGGGTATTT+TGG + tig0029124:44862-44881 Msa1440790:intron 20.0%
!!! TTTATGGATTTTTAGAAACT+TGG + tig0029124:45998-46017 Msa1440790:intron 20.0%
!!! ATAGATCTTAATTTTGGTTT+GGG - tig0029124:46797-46816 None:intergenic 20.0%
!!! AATTAAAGTATGTTCTAGTT+TGG + tig0029124:47281-47300 Msa1440790:intron 20.0%
!! AGCATTATTATTTGTTTACA+AGG + tig0029124:47313-47332 Msa1440790:intron 20.0%
!! TTAGTTATAAATCAAGTTTC+TGG - tig0029124:47508-47527 None:intergenic 20.0%
!!! CTAGATCTAAAATATAACTT+GGG - tig0029124:47590-47609 None:intergenic 20.0%
!!! TCTAGATCTAAAATATAACT+TGG - tig0029124:47591-47610 None:intergenic 20.0%
!!! TCAGACTTTTTTTTTTTAAG+TGG - tig0029124:47650-47669 None:intergenic 20.0%
!!! ATAGTTGTTTTTGTTTCTAT+AGG + tig0029124:48652-48671 Msa1440790:intron 20.0%
!! TTATGAATTAATGTTGAGTT+TGG + tig0029124:49263-49282 Msa1440790:three_prime_UTR 20.0%
! ATTAATACTGAGAGGTTATA+TGG - tig0029124:36414-36433 None:intergenic 25.0%
! ATATAACCTCTCAGTATTAA+TGG + tig0029124:36413-36432 Msa1440790:CDS 25.0%
! TGGGATTGATATAAATTAGT+CGG + tig0029124:36682-36701 Msa1440790:intron 25.0%
! TTGCTAGTATAATATAGTTG+TGG - tig0029124:36742-36761 None:intergenic 25.0%
! AAAAAAAGGAAAATGCGATT+TGG + tig0029124:36949-36968 Msa1440790:intron 25.0%
!!! TATCACCTTTTTTTTTTGAG+AGG + tig0029124:37033-37052 Msa1440790:intron 25.0%
! AGAATGTGTTCAATACAATT+TGG + tig0029124:37082-37101 Msa1440790:intron 25.0%
! TTGGTATAGTAACCAATATT+TGG + tig0029124:37101-37120 Msa1440790:intron 25.0%
! TGGTATAGTAACCAATATTT+GGG + tig0029124:37102-37121 Msa1440790:intron 25.0%
! TACAATCCCATAAGATAATT+TGG + tig0029124:37516-37535 Msa1440790:intron 25.0%
! TGATAGCCAAATTATCTTAT+GGG - tig0029124:37525-37544 None:intergenic 25.0%
!! TTGATAGCCAAATTATCTTA+TGG - tig0029124:37526-37545 None:intergenic 25.0%
!! CTATGTTAGTTAATGTTTTG+TGG - tig0029124:37660-37679 None:intergenic 25.0%
!!! TTTTTGTTTACGTTTTGAGA+CGG - tig0029124:37691-37710 None:intergenic 25.0%
! CTCAAAACGTAAACAAAAAT+TGG + tig0029124:37692-37711 Msa1440790:intron 25.0%
! TGGTTCAAAGTTAATTTATC+TGG + tig0029124:37735-37754 Msa1440790:intron 25.0%
!! TTATAAATTTTATACCGTGC+CGG - tig0029124:37932-37951 None:intergenic 25.0%
! TTTGTTAAAGATACCAAGAA+AGG - tig0029124:38141-38160 None:intergenic 25.0%
!!! TTAGACCACCTTTTTTTTAA+CGG - tig0029124:38373-38392 None:intergenic 25.0%
!! AACCTAAGAGTATGTTTAAA+GGG - tig0029124:38850-38869 None:intergenic 25.0%
!! TAACCTAAGAGTATGTTTAA+AGG - tig0029124:38851-38870 None:intergenic 25.0%
! GTTTATATTATCAGATGCAA+GGG + tig0029124:38974-38993 Msa1440790:intron 25.0%
!!! AAAGTGGCTTTAATAACTTT+TGG - tig0029124:39059-39078 None:intergenic 25.0%
! GATTATATTCACTGATAAGT+GGG + tig0029124:39113-39132 Msa1440790:intron 25.0%
! TACAATGCTTAACATTTACA+TGG - tig0029124:39215-39234 None:intergenic 25.0%
!! AGGAAAGAATTCCTTTTTAT+GGG + tig0029124:39377-39396 Msa1440790:intron 25.0%
!! ATACTTCCTTAATTTGATCA+GGG - tig0029124:39434-39453 None:intergenic 25.0%
!! AATACTTCCTTAATTTGATC+AGG - tig0029124:39435-39454 None:intergenic 25.0%
! GTTGGTATTATAGATTATGA+GGG + tig0029124:39513-39532 Msa1440790:CDS 25.0%
!! TTACTTTCAATTTTTCTAGG+TGG - tig0029124:39581-39600 None:intergenic 25.0%
! ACCTAGAAAAATTGAAAGTA+AGG + tig0029124:39580-39599 Msa1440790:intron 25.0%
!! ACCTTACTTTCAATTTTTCT+AGG - tig0029124:39584-39603 None:intergenic 25.0%
! ATTCATTTCATTAGGTACTA+TGG - tig0029124:40224-40243 None:intergenic 25.0%
! GAAACACAATTCATTTCATT+AGG - tig0029124:40232-40251 None:intergenic 25.0%
!! TCTAGATAAATGTGTTTTCT+AGG + tig0029124:40306-40325 Msa1440790:intron 25.0%
!!! ATGGAAATAGTAAGAGTATT+GGG + tig0029124:40498-40517 Msa1440790:intron 25.0%
! ATACAAAACTTCATGTGATA+AGG - tig0029124:40744-40763 None:intergenic 25.0%
!!! TATCTCTTTCTATTTTAGTG+AGG + tig0029124:40769-40788 Msa1440790:intron 25.0%
! ATTTCATGTGACATTGTTAA+GGG - tig0029124:41015-41034 None:intergenic 25.0%
! AATTTCATGTGACATTGTTA+AGG - tig0029124:41016-41035 None:intergenic 25.0%
!!! AAAGTTTGTTATTTCCCTTT+TGG + tig0029124:41360-41379 Msa1440790:CDS 25.0%
!! TTTAGTAGCTTAACTCTTTT+AGG + tig0029124:41581-41600 Msa1440790:intron 25.0%
!!! AAATCAAAAGAGGTTTTATG+AGG + tig0029124:41750-41769 Msa1440790:intron 25.0%
! AGCATCAAAGTAAATTGAAA+TGG + tig0029124:42005-42024 Msa1440790:intron 25.0%
! TACATAATAAGTATGAAGCA+CGG + tig0029124:42168-42187 Msa1440790:intron 25.0%
! AATATCTTATGATATGCAGA+CGG + tig0029124:42530-42549 Msa1440790:intron 25.0%
! AACACAAAAAGTAGAAAGAA+AGG + tig0029124:42648-42667 Msa1440790:intron 25.0%
! CGGAATATATTTGAAAAAGT+AGG - tig0029124:42756-42775 None:intergenic 25.0%
! ATATATTCCGTCTTAATCTA+AGG + tig0029124:42766-42785 Msa1440790:intron 25.0%
!!! AAAATTTGTTTTTCAGACTG+GGG + tig0029124:43022-43041 Msa1440790:intron 25.0%
!! AAGTTTCTTTGTTCTGTTTT+TGG + tig0029124:43371-43390 Msa1440790:intron 25.0%
! AAGTTTGTACAGAAAAAATG+GGG - tig0029124:43632-43651 None:intergenic 25.0%
! CAAAGTTTGTACAGAAAAAA+TGG - tig0029124:43634-43653 None:intergenic 25.0%
! TTCAAAAGTGACACTTAAAA+AGG - tig0029124:43757-43776 None:intergenic 25.0%
! TTTGAAAGTGACAGTTAAAT+AGG - tig0029124:43793-43812 None:intergenic 25.0%
! ATAAATAACTAAGGGTAATG+TGG - tig0029124:43845-43864 None:intergenic 25.0%
! TTACCCTTAGTTATTTATTG+TGG + tig0029124:43847-43866 Msa1440790:intron 25.0%
! TCTCCACAATAAATAACTAA+GGG - tig0029124:43853-43872 None:intergenic 25.0%
! CATTCAATTATTCACCTAAA+AGG - tig0029124:44104-44123 None:intergenic 25.0%
! ATACATGATTTAATTCACGT+TGG + tig0029124:44226-44245 Msa1440790:intron 25.0%
!!! TACTTGATTTTAATTCACGT+AGG + tig0029124:44261-44280 Msa1440790:intron 25.0%
!! AAAACGTGAAAAAGCTTTAT+GGG + tig0029124:44816-44835 Msa1440790:intron 25.0%
!!! TTATGTTTTTGTCTTGGTTT+TGG - tig0029124:44996-45015 None:intergenic 25.0%
! ACCAAGACAAAAACATAAAA+TGG + tig0029124:44998-45017 Msa1440790:intron 25.0%
!!! TCCATTTTATGTTTTTGTCT+TGG - tig0029124:45002-45021 None:intergenic 25.0%
! AAGACAAAAACATAAAATGG+AGG + tig0029124:45001-45020 Msa1440790:intron 25.0%
! AAGACATAATCTAAATCCAT+TGG + tig0029124:45229-45248 Msa1440790:intron 25.0%
! ATTAGTAGATGTACCATATT+TGG - tig0029124:45306-45325 None:intergenic 25.0%
! AAGACTATAATTTAGAAAGG+AGG - tig0029124:45396-45415 None:intergenic 25.0%
!! ATGATTAGTTGTGATTTCAA+TGG + tig0029124:45440-45459 Msa1440790:intron 25.0%
! GGGATATATGATCTTATTAT+TGG + tig0029124:45688-45707 Msa1440790:intron 25.0%
! ATGATCTTATTATTGGACAA+TGG + tig0029124:45695-45714 Msa1440790:intron 25.0%
!! GCATAAATTTTGCACATATT+AGG + tig0029124:45902-45921 Msa1440790:intron 25.0%
!! TTTTGCACATATTAGGAAAA+AGG + tig0029124:45909-45928 Msa1440790:intron 25.0%
!!! TATTTTTGGAAATGTACTTC+CGG - tig0029124:45978-45997 None:intergenic 25.0%
! ATTGATTGAGTTAAAAATGG+TGG - tig0029124:46107-46126 None:intergenic 25.0%
!! CACATTGATTGAGTTAAAAA+TGG - tig0029124:46110-46129 None:intergenic 25.0%
! GGTTTATATTATAAGATGCA+AGG + tig0029124:46332-46351 Msa1440790:intron 25.0%
!!! GATAGATCTTAATTTTGGTT+TGG - tig0029124:46798-46817 None:intergenic 25.0%
!! TTACTTTCAATTTTTCTAGG+TGG - tig0029124:39581-39600 None:intergenic 25.0%
! ACCTAGAAAAATTGAAAGTA+AGG + tig0029124:39580-39599 Msa1440790:intron 25.0%
!! ACCTTACTTTCAATTTTTCT+AGG - tig0029124:39584-39603 None:intergenic 25.0%
!! ATTGATTTACTTCATACTGT+AGG + tig0029124:46981-47000 Msa1440790:intron 25.0%
! TTGATTTACTTCATACTGTA+GGG + tig0029124:46982-47001 Msa1440790:intron 25.0%
! CTAAAATATAACTTGGGATA+GGG - tig0029124:47584-47603 None:intergenic 25.0%
!! TCTAAAATATAACTTGGGAT+AGG - tig0029124:47585-47604 None:intergenic 25.0%
!! CTGAAAAAAGTGTATAAAGA+AGG + tig0029124:47666-47685 Msa1440790:intron 25.0%
! ATTCATTTCATTAGGTACTT+TGG - tig0029124:47739-47758 None:intergenic 25.0%
!! ATTAACATCAAGTGTTTTCT+AGG + tig0029124:47787-47806 Msa1440790:intron 25.0%
!!! ATGGAAATAGTAAGAGTATT+GGG + tig0029124:40498-40517 Msa1440790:intron 25.0%
! TCTCTCTTTACTGATATTAA+AGG + tig0029124:48261-48280 Msa1440790:intron 25.0%
! CTCTCTTTACTGATATTAAA+GGG + tig0029124:48262-48281 Msa1440790:intron 25.0%
! TCTCTTTACTGATATTAAAG+GGG + tig0029124:48263-48282 Msa1440790:intron 25.0%
!!! ACTATCAAATTTGAGTTTTC+TGG + tig0029124:48373-48392 Msa1440790:intron 25.0%
!!! AGGTCAACTTATTTTTTACA+AGG - tig0029124:48405-48424 None:intergenic 25.0%
!! TGTAAAAAATAAGTTGACCT+AGG + tig0029124:48405-48424 Msa1440790:intron 25.0%
!! TTTTCATGTGACATTGTTAA+GGG - tig0029124:48552-48571 None:intergenic 25.0%
!! ATTTTCATGTGACATTGTTA+AGG - tig0029124:48553-48572 None:intergenic 25.0%
!!! CTTAGTAGGTTAACTTTTTT+AGG + tig0029124:49122-49141 Msa1440790:three_prime_UTR 25.0%
!! CAAATTTTGCTCCAATATTA+TGG + tig0029124:49231-49250 Msa1440790:three_prime_UTR 25.0%
! TTTGTTCAATATAAAGCTTC+AGG - tig0029124:49353-49372 None:intergenic 25.0%
ATTTGTCCATTAATACTGAG+AGG - tig0029124:36422-36441 None:intergenic 30.0%
CATCAAACTGTACACAAATA+TGG + tig0029124:36537-36556 Msa1440790:CDS 30.0%
GGTGTATGAACAAAATAGAA+AGG - tig0029124:36579-36598 None:intergenic 30.0%
AAATTAGTCGGTCTTTAAAC+TGG + tig0029124:36694-36713 Msa1440790:intron 30.0%
GACCGATTATATTTCAACAT+TGG - tig0029124:37563-37582 None:intergenic 30.0%
! ACCAATCTTTCCTTACATTT+TGG + tig0029124:37788-37807 Msa1440790:intron 30.0%
! CCAATCTTTCCTTACATTTT+GGG + tig0029124:37789-37808 Msa1440790:intron 30.0%
AAAATAAATATACACCGGCA+CGG + tig0029124:37915-37934 Msa1440790:intron 30.0%
!! ACGACTCTGAAACAAATAAT+AGG + tig0029124:38185-38204 Msa1440790:intron 30.0%
CTTCCTTAAAAAATGACCTT+GGG - tig0029124:38255-38274 None:intergenic 30.0%
ACTTCCTTAAAAAATGACCT+TGG - tig0029124:38256-38275 None:intergenic 30.0%
! ACCTAAGAGTATGTTTAAAG+GGG - tig0029124:38849-38868 None:intergenic 30.0%
GGTTTATATTATCAGATGCA+AGG + tig0029124:38973-38992 Msa1440790:intron 30.0%
ATACGTAACACTTCACTTAT+CGG - tig0029124:39092-39111 None:intergenic 30.0%
GGATTATATTCACTGATAAG+TGG + tig0029124:39112-39131 Msa1440790:intron 30.0%
TTCTAACATAAAGCATATGC+AGG + tig0029124:39357-39376 Msa1440790:intron 30.0%
! CAGGAAAGAATTCCTTTTTA+TGG + tig0029124:39376-39395 Msa1440790:intron 30.0%
! AAGAATTCCTTTTTATGGGA+AGG + tig0029124:39381-39400 Msa1440790:intron 30.0%
!! TTGGCGATGGATTTTAATAT+TGG - tig0029124:39483-39502 None:intergenic 30.0%
CGTTGGTATTATAGATTATG+AGG + tig0029124:39512-39531 Msa1440790:CDS 30.0%
TAGATTATGAGGGTAAGAAA+TGG + tig0029124:39523-39542 Msa1440790:CDS 30.0%
AGATTATGAGGGTAAGAAAT+GGG + tig0029124:39524-39543 Msa1440790:CDS 30.0%
GCAATGAAATGATAAGCAAA+TGG + tig0029124:39714-39733 Msa1440790:CDS 30.0%
TGAAATGATAAGCAAATGGA+AGG + tig0029124:39718-39737 Msa1440790:CDS 30.0%
AAGGAATTATTGTCATCAGA+TGG + tig0029124:39737-39756 Msa1440790:CDS 30.0%
! ATTTCAACTTCTAAAGAAGC+AGG + tig0029124:39859-39878 Msa1440790:CDS 30.0%
! TTTCAACTTCTAAAGAAGCA+GGG + tig0029124:39860-39879 Msa1440790:CDS 30.0%
TACAGACGAACAATTCATTA+TGG + tig0029124:39903-39922 Msa1440790:CDS 30.0%
ACAGACGAACAATTCATTAT+GGG + tig0029124:39904-39923 Msa1440790:CDS 30.0%
TCTAGAGATGTTAAATGTGA+AGG - tig0029124:40292-40311 None:intergenic 30.0%
!! GAAGATGAAAGAAGTTGATA+GGG + tig0029124:40352-40371 Msa1440790:CDS 30.0%
AATGCCTAATAAATCGTCAT+TGG - tig0029124:40444-40463 None:intergenic 30.0%
! CGATTTATTAGGCATTCTTT+TGG + tig0029124:40448-40467 Msa1440790:CDS 30.0%
!!! ATTTCCATGTCCTTGTTTTT+CGG - tig0029124:40486-40505 None:intergenic 30.0%
! CATGGAAATAGTAAGAGTAT+TGG + tig0029124:40497-40516 Msa1440790:intron 30.0%
! AGGAAGTTTTGCAAGTTTTT+GGG + tig0029124:40650-40669 Msa1440790:CDS 30.0%
!!! CTTTCTATTTTAGTGAGGTT+TGG + tig0029124:40774-40793 Msa1440790:intron 30.0%
!!! AGGTCAACTTATTTTTGACA+AGG - tig0029124:40868-40887 None:intergenic 30.0%
! TGTCAAAAATAAGTTGACCT+AGG + tig0029124:40868-40887 Msa1440790:intron 30.0%
! AAAAATAAGTTGACCTAGGT+AGG + tig0029124:40872-40891 Msa1440790:intron 30.0%
AATTCATCCAGAAGGAAATT+AGG + tig0029124:40947-40966 Msa1440790:intron 30.0%
ATTCATCCAGAAGGAAATTA+GGG + tig0029124:40948-40967 Msa1440790:intron 30.0%
GGTTGAAGTAAATTAAAGGT+GGG - tig0029124:41173-41192 None:intergenic 30.0%
!! GTGAATCAATAGTATTGGTA+GGG - tig0029124:41256-41275 None:intergenic 30.0%
TCTTGGTGAATCAATAGTAT+TGG - tig0029124:41261-41280 None:intergenic 30.0%
!!! TTTGTTATTTCCCTTTTGGA+TGG + tig0029124:41364-41383 Msa1440790:CDS 30.0%
!!! TTGTTATTTCCCTTTTGGAT+GGG + tig0029124:41365-41384 Msa1440790:CDS 30.0%
! TTTTGTCCAAGACAAATTCT+AGG - tig0029124:41393-41412 None:intergenic 30.0%
TTACTTTGACGCCAAAAAAT+GGG + tig0029124:41511-41530 Msa1440790:CDS 30.0%
AAGCTACTAAATAACTCCAT+TGG - tig0029124:41572-41591 None:intergenic 30.0%
! TGATTTGTATAAGAAACCAC+AGG + tig0029124:41647-41666 Msa1440790:intron 30.0%
AATTCATAAACTCATACCTG+TGG - tig0029124:41666-41685 None:intergenic 30.0%
CAGGTATGAGTTTATGAATT+TGG + tig0029124:41666-41685 Msa1440790:intron 30.0%
CAAATTATGCTCCAATATGA+AGG + tig0029124:41690-41709 Msa1440790:intron 30.0%
GTTGGTGTAAAAATCAAAAG+AGG + tig0029124:41740-41759 Msa1440790:intron 30.0%
TCATACATGGTTTGATATAG+TGG - tig0029124:41858-41877 None:intergenic 30.0%
GTACAGCAATCAAAGTAAAA+CGG + tig0029124:41926-41945 Msa1440790:intron 30.0%
CAATTTACTTTGATGCTATC+TGG - tig0029124:42002-42021 None:intergenic 30.0%
AGTGAATCAAATAGTACAAG+AGG - tig0029124:42090-42109 None:intergenic 30.0%
!! CAATGATTTGGATTTTGTCA+AGG + tig0029124:42493-42512 Msa1440790:intron 30.0%
AAGTAGGCTAACAAAAGATT+TGG - tig0029124:42740-42759 None:intergenic 30.0%
TAATGTGCCTTAGATTAAGA+CGG - tig0029124:42776-42795 None:intergenic 30.0%
ATGCCTACAAAATTAGAGAA+CGG + tig0029124:43172-43191 Msa1440790:intron 30.0%
!!! TTGTTCTGTTTTTGGAGTTT+TGG + tig0029124:43379-43398 Msa1440790:intron 30.0%
!!! CAACCTCTAAATAGCTTTTT+TGG + tig0029124:43501-43520 Msa1440790:intron 30.0%
AGTCCAAAAAAGCTATTTAG+AGG - tig0029124:43507-43526 None:intergenic 30.0%
AAGTGACACTTAAAAAGGAA+CGG - tig0029124:43987-44006 None:intergenic 30.0%
CTCTCCACAATAAATAACTA+AGG - tig0029124:43854-43873 None:intergenic 30.0%
GTAACATTTATTGAGTGTCT+TGG + tig0029124:43946-43965 Msa1440790:intron 30.0%
AAGTGACACTTAAAAAGGAA+CGG + tig0029124:43987-44006 Msa1440790:intron 30.0%
AATTATTCACCTAAAAGGTG+GGG - tig0029124:44099-44118 None:intergenic 30.0%
CAATTATTCACCTAAAAGGT+GGG - tig0029124:44100-44119 None:intergenic 30.0%
TCAATTATTCACCTAAAAGG+TGG - tig0029124:44101-44120 None:intergenic 30.0%
! TTGGGTGTAACTTGATATTT+TGG - tig0029124:44143-44162 None:intergenic 30.0%
TCATGTATCATCATAAGAGT+GGG - tig0029124:44214-44233 None:intergenic 30.0%
ATCATGTATCATCATAAGAG+TGG - tig0029124:44215-44234 None:intergenic 30.0%
ACAACAAAGGAATATGTATC+AGG - tig0029124:44342-44361 None:intergenic 30.0%
GAAAACGTGAAAAAGCTTTA+TGG + tig0029124:44815-44834 Msa1440790:intron 30.0%
! AAACGTGAAAAAGCTTTATG+GGG + tig0029124:44817-44836 Msa1440790:intron 30.0%
ACAAACAGTGAAAGCTTATA+TGG - tig0029124:45171-45190 None:intergenic 30.0%
TCATCAAACTGTACCAAATA+TGG + tig0029124:45290-45309 Msa1440790:intron 30.0%
GAGTACTAGCATTAAATTGT+TGG + tig0029124:45638-45657 Msa1440790:intron 30.0%
AAATTCGAAGTCTATCCTAA+GGG - tig0029124:46040-46059 None:intergenic 30.0%
TTAGGATAGACTTCGAATTT+GGG + tig0029124:46040-46059 Msa1440790:intron 30.0%
ATGTGCTATCATTGATATTG+TGG + tig0029124:46125-46144 Msa1440790:intron 30.0%
AAAAGTAAAGAACAGAGTTC+TGG + tig0029124:46300-46319 Msa1440790:intron 30.0%
!! AAAGTGGCTTTAACAACTTA+TGG - tig0029124:46415-46434 None:intergenic 30.0%
! TTATCTGTTTACTTTCGAGT+TGG + tig0029124:46647-46666 Msa1440790:intron 30.0%
!! TATCTGTTTACTTTCGAGTT+GGG + tig0029124:46648-46667 Msa1440790:intron 30.0%
!! GGTTTGTTGTTCTAACATAA+AGG + tig0029124:46669-46688 Msa1440790:intron 30.0%
TTCTAACATAAAGGATATGC+AGG + tig0029124:46678-46697 Msa1440790:intron 30.0%
AGGAAAGAATTCCTTCTTAT+GGG + tig0029124:46698-46717 Msa1440790:intron 30.0%
! AGACTTCCTTAATTTGATCA+GGG - tig0029124:46755-46774 None:intergenic 30.0%
! AAGACTTCCTTAATTTGATC+AGG - tig0029124:46756-46775 None:intergenic 30.0%
! TTGGCGATAGATCTTAATTT+TGG - tig0029124:46803-46822 None:intergenic 30.0%
TATCATTTCATTGCAACTGT+GGG - tig0029124:39708-39727 None:intergenic 30.0%
TTATCATTTCATTGCAACTG+TGG - tig0029124:39709-39728 None:intergenic 30.0%
GCAATGAAATGATAAGCAAA+TGG + tig0029124:39714-39733 Msa1440790:CDS 30.0%
TGAAATGATAAGCAAATGGA+AGG + tig0029124:39718-39737 Msa1440790:CDS 30.0%
AAGGAATTATTGTCATCAGA+TGG + tig0029124:39737-39756 Msa1440790:CDS 30.0%
TTACCTGTGATGTAATTTCT+CGG + tig0029124:47115-47134 Msa1440790:CDS 30.0%
! ATTTCAACTTCTAAAGAAGC+AGG + tig0029124:39859-39878 Msa1440790:CDS 30.0%
! TTTCAACTTCTAAAGAAGCA+GGG + tig0029124:39860-39879 Msa1440790:CDS 30.0%
! TTTTACACGACTAATCTGTA+TGG + tig0029124:47697-47716 Msa1440790:intron 30.0%
GCAACACAATTCATTTCATT+AGG - tig0029124:47747-47766 None:intergenic 30.0%
AATTTCTTTCATCTTCGTCT+TGG - tig0029124:47829-47848 None:intergenic 30.0%
AATGCCTAATAAATCGTCAT+TGG - tig0029124:40444-40463 None:intergenic 30.0%
! CATGGAAATAGTAAGAGTAT+TGG + tig0029124:40497-40516 Msa1440790:intron 30.0%
! ACGAAGTTTTGCAAGTTTTT+GGG + tig0029124:48130-48149 Msa1440790:intron 30.0%
AACCAAAATCCAAACTTTGA+AGG + tig0029124:48153-48172 Msa1440790:intron 30.0%
AATATCAGTAAAGAGAGAGA+TGG - tig0029124:48259-48278 None:intergenic 30.0%
! AAAAATAAGTTGACCTAGGT+AGG + tig0029124:40872-40891 Msa1440790:intron 30.0%
ATTCATCCAAGAAGGAAATT+AGG + tig0029124:48485-48504 Msa1440790:intron 30.0%
TTCATCCAAGAAGGAAATTA+GGG + tig0029124:48486-48505 Msa1440790:intron 30.0%
ACTATCAGATAGTACCAAAA+AGG - tig0029124:48637-48656 None:intergenic 30.0%
GGTTGAAGTAAATTAATGGT+GGG - tig0029124:48712-48731 None:intergenic 30.0%
!! GTGAATCAATAGTATTGGTA+GGG - tig0029124:41256-41275 None:intergenic 30.0%
TCTTGGTGAATCAATAGTAT+TGG - tig0029124:41261-41280 None:intergenic 30.0%
!! CAAGTTTCTTATTTCCCTTT+TGG + tig0029124:48899-48918 Msa1440790:CDS 30.0%
!! TTTCTTATTTCCCTTTTGGA+TGG + tig0029124:48903-48922 Msa1440790:CDS 30.0%
!! TTCTTATTTCCCTTTTGGAT+GGG + tig0029124:48904-48923 Msa1440790:CDS 30.0%
! TTTTGTCCAAGACAAATTCT+AGG - tig0029124:41393-41412 None:intergenic 30.0%
ATCCAATGTAGTTACTTAGT+AGG + tig0029124:49108-49127 Msa1440790:three_prime_UTR 30.0%
AACCTACTAAGTAACTACAT+TGG - tig0029124:49113-49132 None:intergenic 30.0%
!!! ACTTTTTTAGGTGATCATTC+TGG + tig0029124:49134-49153 Msa1440790:three_prime_UTR 30.0%
AATTCATAAACTCATACCAG+TGG - tig0029124:49207-49226 None:intergenic 30.0%
CTGGTATGAGTTTATGAATT+TGG + tig0029124:49207-49226 Msa1440790:three_prime_UTR 30.0%
! TTTTGCTCCAATATTATGGT+TGG + tig0029124:49235-49254 Msa1440790:three_prime_UTR 30.0%
AAACAAGCCAACCATAATAT+TGG - tig0029124:49245-49264 None:intergenic 30.0%
! ATGATTATTGTTGTTCCCGT+GGG - tig0029124:36279-36298 None:intergenic 35.0%
AGAAGTTTCTCAAACCTCTT+TGG - tig0029124:36366-36385 None:intergenic 35.0%
TGAACATGAGTGAAGATAGA+TGG - tig0029124:36519-36538 None:intergenic 35.0%
GTGGAATGGAACATTTACAT+TGG - tig0029124:36600-36619 None:intergenic 35.0%
AATGAACCCCTGTTAGTAAA+CGG + tig0029124:36659-36678 Msa1440790:intron 35.0%
!! TATATACAAAAGCATCGACG+TGG - tig0029124:36913-36932 None:intergenic 35.0%
CTTGGCAGGTTCAAAATATT+CGG + tig0029124:37007-37026 Msa1440790:intron 35.0%
TGCTCATAGTTTAGCTAAAG+CGG - tig0029124:37146-37165 None:intergenic 35.0%
! CCTTTTATCTACCATGGATT+GGG - tig0029124:37356-37375 None:intergenic 35.0%
ATGTGCATTAGAGATGAGAA+CGG - tig0029124:37448-37467 None:intergenic 35.0%
! ATTATCTGAGACTTCGAATC+TGG - tig0029124:37482-37501 None:intergenic 35.0%
! TGTAAGGAAAGATTGGTCAA+CGG - tig0029124:37785-37804 None:intergenic 35.0%
CCCAAAATGTAAGGAAAGAT+TGG - tig0029124:37792-37811 None:intergenic 35.0%
!! TCTTTCCTTACATTTTGGGA+CGG + tig0029124:37793-37812 Msa1440790:intron 35.0%
!!! TTGCCCAAGGTCATTTTTTA+AGG + tig0029124:38249-38268 Msa1440790:intron 35.0%
!!! GGTCATTTTTTAAGGAAGTG+TGG + tig0029124:38257-38276 Msa1440790:intron 35.0%
CACTTCTACCAAAAGAAGTA+TGG + tig0029124:38285-38304 Msa1440790:intron 35.0%
! GTGCAAAACCATACTTCTTT+TGG - tig0029124:38296-38315 None:intergenic 35.0%
! TTTTTAACGGCTGTGCTATA+TGG - tig0029124:38360-38379 None:intergenic 35.0%
TAGCACAGCCGTTAAAAAAA+AGG + tig0029124:38362-38381 Msa1440790:intron 35.0%
! ACTATTTTCTCCTCAAACCT+TGG - tig0029124:38781-38800 None:intergenic 35.0%
! GTATGTTTAAAGGGGGATTT+TGG - tig0029124:38841-38860 None:intergenic 35.0%
! CCTAAGAGTATGTTTAAAGG+GGG - tig0029124:38848-38867 None:intergenic 35.0%
TATCCTGAGATGTACACATT+AGG + tig0029124:38891-38910 Msa1440790:intron 35.0%
TTTCCTAATGTGTACATCTC+AGG - tig0029124:38897-38916 None:intergenic 35.0%
! AGAAAAGAACAGAGTTCTGA+AGG + tig0029124:38943-38962 Msa1440790:intron 35.0%
CGAGTCTGTATATCATTGTT+TGG - tig0029124:39000-39019 None:intergenic 35.0%
!!! GTGGCTTTAATAACTTTTGG+AGG - tig0029124:39056-39075 None:intergenic 35.0%
TATCGGCAACTAGTAAAAAG+TGG - tig0029124:39075-39094 None:intergenic 35.0%
! GATAAGTGAAGTGTTACGTA+TGG + tig0029124:39091-39110 Msa1440790:intron 35.0%
TGTTGTACCTTCCCATAAAA+AGG - tig0029124:39391-39410 None:intergenic 35.0%
!! GGAAGTATTTAACAAGATCG+AGG + tig0029124:39446-39465 Msa1440790:CDS 35.0%
AATACCAACGCTCAAATACT+TGG - tig0029124:39502-39521 None:intergenic 35.0%
!! GTAAGAAATGGGCTAAACAT+AGG + tig0029124:39535-39554 Msa1440790:CDS 35.0%
! AATTTTTCTAGGTGGAATGC+TGG - tig0029124:39573-39592 None:intergenic 35.0%
! CAGGTAAAATTCTGAAGGAA+AGG - tig0029124:39785-39804 None:intergenic 35.0%
CATCACAGGTAAAATTCTGA+AGG - tig0029124:39790-39809 None:intergenic 35.0%
! TTACCTGTGATGTCATTTCT+CGG + tig0029124:39798-39817 Msa1440790:CDS 35.0%
!! AGGGATTTCTTTTGATGACA+GGG + tig0029124:39879-39898 Msa1440790:CDS 35.0%
CAGACGAACAATTCATTATG+GGG + tig0029124:39905-39924 Msa1440790:CDS 35.0%
AGACGAACAATTCATTATGG+GGG + tig0029124:39906-39925 Msa1440790:CDS 35.0%
CTAACTCAACCATACAGATT+AGG - tig0029124:40194-40213 None:intergenic 35.0%
TAAATGTGAAGGAACACACT+TGG - tig0029124:40281-40300 None:intergenic 35.0%
AACTTCTTTCATCTTCGTCT+TGG - tig0029124:40348-40367 None:intergenic 35.0%
! CGAAGATGAAAGAAGTTGAT+AGG + tig0029124:40351-40370 Msa1440790:CDS 35.0%
GAAATCCATGATTCACTTGA+GGG + tig0029124:40374-40393 Msa1440790:CDS 35.0%
TAATTCCCTCAAGTGAATCA+TGG - tig0029124:40382-40401 None:intergenic 35.0%
CGAGAAAAAGCAATGAAGAA+TGG + tig0029124:40410-40429 Msa1440790:CDS 35.0%
ACCACCAATGACGATTTATT+AGG + tig0029124:40437-40456 Msa1440790:CDS 35.0%
TCAAATCATGCCGAAAAACA+AGG + tig0029124:40473-40492 Msa1440790:CDS 35.0%
ATTCATCTATCACATCTTGG+TGG - tig0029124:40528-40547 None:intergenic 35.0%
TGCATTCATCTATCACATCT+TGG - tig0029124:40531-40550 None:intergenic 35.0%
!! TGCAAATTGTTTTACCTTGC+TGG + tig0029124:40547-40566 Msa1440790:intron 35.0%
!! GCAAATTGTTTTACCTTGCT+GGG + tig0029124:40548-40567 Msa1440790:intron 35.0%
! CAGGAAGTTTTGCAAGTTTT+TGG + tig0029124:40649-40668 Msa1440790:CDS 35.0%
AACCAAAATCCAAACAACGA+AGG + tig0029124:40673-40692 Msa1440790:CDS 35.0%
! ATCCTTCGTTGTTTGGATTT+TGG - tig0029124:40678-40697 None:intergenic 35.0%
TGACTTAATCCTTCGTTGTT+TGG - tig0029124:40685-40704 None:intergenic 35.0%
TAGTACCTCGTACAAAATCA+TGG - tig0029124:41142-41161 None:intergenic 35.0%
!! TGATTTTGTACGAGGTACTA+AGG + tig0029124:41142-41161 Msa1440790:CDS 35.0%
CGGTTGAAGTAAATTAAAGG+TGG - tig0029124:41174-41193 None:intergenic 35.0%
GCTCGGTTGAAGTAAATTAA+AGG - tig0029124:41177-41196 None:intergenic 35.0%
! CTTCGAAAGGATTTGAAACT+TGG + tig0029124:41198-41217 Msa1440790:CDS 35.0%
AATTTGTGTTCCTTCAGGTA+GGG - tig0029124:41232-41251 None:intergenic 35.0%
AAATTTGTGTTCCTTCAGGT+AGG - tig0029124:41233-41252 None:intergenic 35.0%
!! GGTGAATCAATAGTATTGGT+AGG - tig0029124:41257-41276 None:intergenic 35.0%
TTCACCAAGATCATGATCTA+TGG + tig0029124:41271-41290 Msa1440790:CDS 35.0%
TCACCAAGATCATGATCTAT+GGG + tig0029124:41272-41291 Msa1440790:CDS 35.0%
!!! TGTTATTTCCCTTTTGGATG+GGG + tig0029124:41366-41385 Msa1440790:CDS 35.0%
TGCTATCTTTGCTTCTAGTA+AGG - tig0029124:41421-41440 None:intergenic 35.0%
GTAGGAACATGCACATAATT+TGG - tig0029124:41483-41502 None:intergenic 35.0%
CTTACTTTGACGCCAAAAAA+TGG + tig0029124:41510-41529 Msa1440790:CDS 35.0%
TACTTTGACGCCAAAAAATG+GGG + tig0029124:41512-41531 Msa1440790:CDS 35.0%
TTATGCTCCAATATGAAGGT+TGG + tig0029124:41694-41713 Msa1440790:intron 35.0%
TATGCTCCAATATGAAGGTT+GGG + tig0029124:41695-41714 Msa1440790:intron 35.0%
CAGACTTAATTCATGCTACT+AGG - tig0029124:42349-42368 None:intergenic 35.0%
CTAGTAGCATGAATTAAGTC+TGG + tig0029124:42347-42366 Msa1440790:intron 35.0%
TAGCATGAATTAAGTCTGGT+GGG + tig0029124:42351-42370 Msa1440790:intron 35.0%
! GATTTTGTCAAGGAACAAAC+TGG + tig0029124:42503-42522 Msa1440790:intron 35.0%
! GTTCTCTAATTTTGTAGGCA+TGG - tig0029124:43173-43192 None:intergenic 35.0%
! GTTCCGTTCTCTAATTTTGT+AGG - tig0029124:43178-43197 None:intergenic 35.0%
CCTATGAGTATACGTTTACT+CGG + tig0029124:43202-43221 Msa1440790:intron 35.0%
!! AATTGTCATTTCGCACGTTT+TGG + tig0029124:43230-43249 Msa1440790:intron 35.0%
GAAAAAGGATCTGCAAAGTT+TGG - tig0029124:43295-43314 None:intergenic 35.0%
AAGAGTGGGAAAAAATGAGA+AGG - tig0029124:44200-44219 None:intergenic 35.0%
!! TATGTATCAGGTGGATTTTG+AGG - tig0029124:44330-44349 None:intergenic 35.0%
ACAAAGGAATATGTATCAGG+TGG - tig0029124:44339-44358 None:intergenic 35.0%
ATGATGGTTCATATTGTGGT+TGG - tig0029124:44408-44427 None:intergenic 35.0%
AACCACAATATGAACCATCA+TGG + tig0029124:44407-44426 Msa1440790:intron 35.0%
!! TTTGGTGTTTGCATTTGAGA+GGG - tig0029124:44463-44482 None:intergenic 35.0%
TAATTAGACGAAGCATGCTT+TGG - tig0029124:44554-44573 None:intergenic 35.0%
!!! TAAGGGTATTTTGGCCATTT+TGG + tig0029124:44871-44890 Msa1440790:intron 35.0%
!!! AAGGGTATTTTGGCCATTTT+GGG + tig0029124:44872-44891 Msa1440790:intron 35.0%
! GATGAGTATTGTTGTTCTGT+GGG - tig0029124:45038-45057 None:intergenic 35.0%
! AGATGAGTATTGTTGTTCTG+TGG - tig0029124:45039-45058 None:intergenic 35.0%
GAGAAGTTTCTCAAACACTT+TGG - tig0029124:45124-45143 None:intergenic 35.0%
ATGAACAGAGTGAAGATAGA+TGG - tig0029124:45274-45293 None:intergenic 35.0%
CAGTCATAATGTCAGATCTT+TGG - tig0029124:45368-45387 None:intergenic 35.0%
TTATTGGACAATGGACATGT+AGG + tig0029124:45704-45723 Msa1440790:intron 35.0%
TATTGGACAATGGACATGTA+GGG + tig0029124:45705-45724 Msa1440790:intron 35.0%
!! GGATTTTTAGAAACTTGGAC+TGG + tig0029124:46003-46022 Msa1440790:intron 35.0%
CAAATTCGAAGTCTATCCTA+AGG - tig0029124:46041-46060 None:intergenic 35.0%
CTTAGGATAGACTTCGAATT+TGG + tig0029124:46039-46058 Msa1440790:intron 35.0%
TAGGATAGACTTCGAATTTG+GGG + tig0029124:46041-46060 Msa1440790:intron 35.0%
! GAGTTGCAACATCAAGATTT+TGG - tig0029124:46180-46199 None:intergenic 35.0%
CATTAAGTCCGTATCATGTT+TGG - tig0029124:46359-46378 None:intergenic 35.0%
TATCAGCAACTGGTAAAAAG+TGG - tig0029124:46431-46450 None:intergenic 35.0%
! TTTTACCAGTTGCTGATAAG+TGG + tig0029124:46433-46452 Msa1440790:intron 35.0%
TTTACCAGTTGCTGATAAGT+GGG + tig0029124:46434-46453 Msa1440790:intron 35.0%
CAGGAAAGAATTCCTTCTTA+TGG + tig0029124:46697-46716 Msa1440790:intron 35.0%
AAAGAATTCCTTCTTATGGG+AGG + tig0029124:46701-46720 Msa1440790:intron 35.0%
AAGAATTCCTTCTTATGGGA+GGG + tig0029124:46702-46721 Msa1440790:intron 35.0%
TATACCAACGCTCAAATACT+TGG - tig0029124:46822-46841 None:intergenic 35.0%
GTTGGTATACTAGATCTTGA+GGG + tig0029124:46833-46852 Msa1440790:intron 35.0%
TAGATCTTGAGGGTAAGAAA+TGG + tig0029124:46843-46862 Msa1440790:intron 35.0%
AGATCTTGAGGGTAAGAAAT+GGG + tig0029124:46844-46863 Msa1440790:intron 35.0%
!! GTAAGAAATGGGCTAAACAT+AGG + tig0029124:39535-39554 Msa1440790:CDS 35.0%
! AATTTTTCTAGGTGGAATGC+TGG - tig0029124:39573-39592 None:intergenic 35.0%
GAACATGTGAGATTGATGTT+TGG + tig0029124:47076-47095 Msa1440790:CDS 35.0%
! CAGGTAAAATTCTGAAGGAA+AGG - tig0029124:39785-39804 None:intergenic 35.0%
CATCACAGGTAAAATTCTGA+AGG - tig0029124:39790-39809 None:intergenic 35.0%
!! AGGGATTTCTTTTGATGACA+GGG + tig0029124:39879-39898 Msa1440790:CDS 35.0%
ACAGACGAACAATCCATTAT+GGG + tig0029124:47221-47240 Msa1440790:CDS 35.0%
! GATTAGTCGTGTAAAATGAG+TGG - tig0029124:47693-47712 None:intergenic 35.0%
AGAAATCCATGATTCACTTG+AGG + tig0029124:47854-47873 Msa1440790:CDS 35.0%
GAAATCCATGATTCACTTGA+GGG + tig0029124:40374-40393 Msa1440790:CDS 35.0%
CCTAATAAATCGTCATTGGT+GGG - tig0029124:40440-40459 None:intergenic 35.0%
TCAAATCATGCTGAAAGTCA+AGG + tig0029124:47954-47973 Msa1440790:CDS 35.0%
GCATTCATCTATCACATCTT+GGG - tig0029124:40530-40549 None:intergenic 35.0%
TGCATTCATCTATCACATCT+TGG - tig0029124:40531-40550 None:intergenic 35.0%
!! TGCAAATTGTTTTACCTTGC+TGG + tig0029124:40547-40566 Msa1440790:intron 35.0%
!! GCAAATTGTTTTACCTTGCT+GGG + tig0029124:40548-40567 Msa1440790:intron 35.0%
!! TGGTTTGGAATGGTGTTATT+AGG + tig0029124:48075-48094 Msa1440790:CDS 35.0%
! GACGAAGTTTTGCAAGTTTT+TGG + tig0029124:48129-48148 Msa1440790:intron 35.0%
! GTCCTTCAAAGTTTGGATTT+TGG - tig0029124:48158-48177 None:intergenic 35.0%
TGACTTAGTCCTTCAAAGTT+TGG - tig0029124:48165-48184 None:intergenic 35.0%
GGGTGAATCATAAACATAGT+GGG + tig0029124:48283-48302 Msa1440790:intron 35.0%
GGTGAATCATAAACATAGTG+GGG + tig0029124:48284-48303 Msa1440790:intron 35.0%
! ATCATAAACATAGTGGGGTT+TGG + tig0029124:48289-48308 Msa1440790:intron 35.0%
GATGAAGTATGAATCTCACT+AGG + tig0029124:48433-48452 Msa1440790:intron 35.0%
TAGTGGAAATTCATCCAAGA+AGG + tig0029124:48477-48496 Msa1440790:intron 35.0%
TCATCCAAGAAGGAAATTAG+GGG + tig0029124:48487-48506 Msa1440790:intron 35.0%
TAGTACCTCGTACAAAATCA+TGG - tig0029124:41142-41161 None:intergenic 35.0%
!! TGATTTTGTACGAGGTACTA+AGG + tig0029124:41142-41161 Msa1440790:CDS 35.0%
CGGTTGAAGTAAATTAATGG+TGG - tig0029124:48713-48732 None:intergenic 35.0%
GCTCGGTTGAAGTAAATTAA+TGG - tig0029124:41177-41196 None:intergenic 35.0%
! CTTCGAAAGGATTTGAAACT+TGG + tig0029124:41198-41217 Msa1440790:CDS 35.0%
!! GGTGAATCAATAGTATTGGT+AGG - tig0029124:41257-41276 None:intergenic 35.0%
TTCACCAAGATCATGATCTA+TGG + tig0029124:41271-41290 Msa1440790:CDS 35.0%
TCACCAAGATCATGATCTAT+GGG + tig0029124:41272-41291 Msa1440790:CDS 35.0%
!! TCTTATTTCCCTTTTGGATG+GGG + tig0029124:48905-48924 Msa1440790:CDS 35.0%
TGGACAAAACTTTGCCTTAT+TGG + tig0029124:48943-48962 Msa1440790:CDS 35.0%
GTAGGAACATGCACATAATT+TGG - tig0029124:41483-41502 None:intergenic 35.0%
CTTACTTTGCAGCCAAAAAA+CGG + tig0029124:49049-49068 Msa1440790:CDS 35.0%
TTACTTTGCAGCCAAAAAAC+GGG + tig0029124:49050-49069 Msa1440790:CDS 35.0%
TGCTTTATGTAAGAAACCAC+TGG + tig0029124:49188-49207 Msa1440790:three_prime_UTR 35.0%
CTAAAACTGATCATGTTCCA+GGG + tig0029124:49300-49319 Msa1440790:three_prime_UTR 35.0%
! GATGATTATTGTTGTTCCCG+TGG - tig0029124:36280-36299 None:intergenic 40.0%
!! TTCTACTTGCTGTGATTCCA+TGG + tig0029124:36313-36332 Msa1440790:CDS 40.0%
!! AACTTGTTGAGCAGATACCA+TGG - tig0029124:36333-36352 None:intergenic 40.0%
GGTATCTGCTCAACAAGTTA+TGG + tig0029124:36334-36353 Msa1440790:CDS 40.0%
AGTTATGGCTTAAGCCAAAG+AGG + tig0029124:36349-36368 Msa1440790:CDS 40.0%
GAGAAACTTCTCAAAGCTCA+AGG + tig0029124:36375-36394 Msa1440790:CDS 40.0%
! CTCAAAGCTCAAGGTTTTCA+AGG + tig0029124:36384-36403 Msa1440790:CDS 40.0%
AATCCCACCGTTTACTAACA+GGG - tig0029124:36669-36688 None:intergenic 40.0%
ATCCTACTATTGCACCTGTA+AGG + tig0029124:36860-36879 Msa1440790:intron 40.0%
ACTCTTGTGTTGAGTTTGTG+CGG - tig0029124:37186-37205 None:intergenic 40.0%
ACTAGTGACGTTACAGAGTA+TGG - tig0029124:37256-37275 None:intergenic 40.0%
! TGGGTTCATTTGTTGCAACT+GGG - tig0029124:37337-37356 None:intergenic 40.0%
! TTGGGTTCATTTGTTGCAAC+TGG - tig0029124:37338-37357 None:intergenic 40.0%
CAACAAATGAACCCAATCCA+TGG + tig0029124:37342-37361 Msa1440790:intron 40.0%
CCCAATCCATGGTAGATAAA+AGG + tig0029124:37353-37372 Msa1440790:intron 40.0%
! GCCTTTTATCTACCATGGAT+TGG - tig0029124:37357-37376 None:intergenic 40.0%
! TCTAGGCCTTTTATCTACCA+TGG - tig0029124:37362-37381 None:intergenic 40.0%
CAACATGTACGTCACACATA+GGG + tig0029124:37389-37408 Msa1440790:intron 40.0%
!! TCACTTTGTGTTGGCTAGAA+CGG - tig0029124:37425-37444 None:intergenic 40.0%
!!! TTGTTTACGTTTTGAGACGG+AGG - tig0029124:37688-37707 None:intergenic 40.0%
CACAGCCGTTAAAAAAAAGG+TGG + tig0029124:38365-38384 Msa1440790:intron 40.0%
!! TTTAAAGGGGGATTTTGGAG+GGG - tig0029124:38836-38855 None:intergenic 40.0%
! GTTTAAAGGGGGATTTTGGA+GGG - tig0029124:38837-38856 None:intergenic 40.0%
! TGTTTAAAGGGGGATTTTGG+AGG - tig0029124:38838-38857 None:intergenic 40.0%
CCCCCTTTAAACATACTCTT+AGG + tig0029124:38845-38864 Msa1440790:intron 40.0%
!!! CAGAGTTCTGAAGGAGTTTT+TGG + tig0029124:38952-38971 Msa1440790:intron 40.0%
ATTCACTGATAAGTGGGAAG+AGG + tig0029124:39119-39138 Msa1440790:intron 40.0%
CTCAGAGACGTAAACACAAT+TGG + tig0029124:39264-39283 Msa1440790:intron 40.0%
CACAGACCCTGATCAAATTA+AGG + tig0029124:39425-39444 Msa1440790:intron 40.0%
TTGCAACTGTGAGAAAATGC+AGG - tig0029124:39698-39717 None:intergenic 40.0%
GAACATGTGAGCTTGATGTT+TGG + tig0029124:39759-39778 Msa1440790:CDS 40.0%
!! CAGGGATTTCTTTTGATGAC+AGG + tig0029124:39878-39897 Msa1440790:CDS 40.0%
! TCGTTCACTCAAAGGCATAT+TGG - tig0029124:40075-40094 None:intergenic 40.0%
TACAGACATCGTTCACTCAA+AGG - tig0029124:40083-40102 None:intergenic 40.0%
ATGCTAGACAGAAGAACCAT+GGG + tig0029124:40126-40145 Msa1440790:intron 40.0%
GGAAATCCATGATTCACTTG+AGG + tig0029124:40373-40392 Msa1440790:CDS 40.0%
GCCTAATAAATCGTCATTGG+TGG - tig0029124:40441-40460 None:intergenic 40.0%
!! AAGTTTGCTGGTTTGGACAA+TGG + tig0029124:40585-40604 Msa1440790:intron 40.0%
!! GTTTGGACAATGGTGCTATT+AGG + tig0029124:40595-40614 Msa1440790:intron 40.0%
TATTAGGCAGGTATCCTGAA+TGG + tig0029124:40611-40630 Msa1440790:intron 40.0%
GTGATTGAATATGCTGCACT+AGG + tig0029124:40836-40855 Msa1440790:intron 40.0%
TCATACTTCATCTCCTACCT+AGG - tig0029124:40888-40907 None:intergenic 40.0%
GATGAAGTATGAATCCCACT+AGG + tig0029124:40896-40915 Msa1440790:intron 40.0%
CTAGTGGTAATTCATCCAGA+AGG + tig0029124:40939-40958 Msa1440790:intron 40.0%
GATCTACCCTAATTTCCTTC+TGG - tig0029124:40957-40976 None:intergenic 40.0%
! GGTTACCATGATTTTGTACG+AGG + tig0029124:41134-41153 Msa1440790:intron 40.0%
TCAAATCCTTTCGAAGAGCT+CGG - tig0029124:41194-41213 None:intergenic 40.0%
AGGGAAATTTGTGTTCCTTC+AGG - tig0029124:41237-41256 None:intergenic 40.0%
CACCAAGATCATGATCTATG+GGG + tig0029124:41273-41292 Msa1440790:CDS 40.0%
CAAAGGAGTTCAAACCTGAA+AGG + tig0029124:41304-41323 Msa1440790:CDS 40.0%
!!! ATGATGCTTGCCCCATTTTT+TGG - tig0029124:41525-41544 None:intergenic 40.0%
! AACTGTAAGAGCACATCCAA+TGG + tig0029124:41553-41572 Msa1440790:intron 40.0%
TTCCAACCCAACCTTCATAT+TGG - tig0029124:41704-41723 None:intergenic 40.0%
TGCTTAAAAACCCATGGTGA+TGG + tig0029124:41902-41921 Msa1440790:intron 40.0%
GTACAAGAGGACAAGATGTA+AGG - tig0029124:42077-42096 None:intergenic 40.0%
TGAAGCACGGATAAAAACAC+CGG + tig0029124:42181-42200 Msa1440790:intron 40.0%
TTCTTGCGTCAATATGTGTC+CGG - tig0029124:42203-42222 None:intergenic 40.0%
TAGCACATTGAAGTAGTGTC+TGG - tig0029124:42322-42341 None:intergenic 40.0%
GTAGCATGAATTAAGTCTGG+TGG + tig0029124:42350-42369 Msa1440790:intron 40.0%
GGCATGTGATACTCTTCTAT+CGG - tig0029124:42378-42397 None:intergenic 40.0%
CTGATCTTGCTGCAATGATT+TGG + tig0029124:42481-42500 Msa1440790:intron 40.0%
GACGGACATATCAAGAATAG+TGG + tig0029124:42548-42567 Msa1440790:intron 40.0%
ACTACCCACTATATTGTGAG+CGG + tig0029124:42985-43004 Msa1440790:intron 40.0%
CCGAGTAAACGTATACTCAT+AGG - tig0029124:43205-43224 None:intergenic 40.0%
GACACTTAAAAAGGAACGGA+GGG - tig0029124:43991-44010 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG - tig0029124:43990-44009 None:intergenic 40.0%
TGACACTTAAAAAGGAACGG+AGG + tig0029124:43990-44009 Msa1440790:intron 40.0%
TTGGTGGAAATCATCATCCA+TGG - tig0029124:44389-44408 None:intergenic 40.0%
ATGGTTCATATTGTGGTTGG+TGG - tig0029124:44405-44424 None:intergenic 40.0%
GTCCATGATGGTTCATATTG+TGG - tig0029124:44412-44431 None:intergenic 40.0%
!! CTTTGGTGTTTGCATTTGAG+AGG - tig0029124:44464-44483 None:intergenic 40.0%
!!! AGGGTATTTTGGCCATTTTG+GGG + tig0029124:44873-44892 Msa1440790:intron 40.0%
GGGTGCAACTAGATCATTAT+GGG + tig0029124:44893-44912 Msa1440790:intron 40.0%
GGTGCAACTAGATCATTATG+GGG + tig0029124:44894-44913 Msa1440790:intron 40.0%
! GTGTTGTTGTGTTGTGCAAA+AGG - tig0029124:44970-44989 None:intergenic 40.0%
!! TTCTACTTGCTGTGATTCCA+TGG + tig0029124:36313-36332 Msa1440790:CDS 40.0%
!! AACTTGTTGAGCAGATACCA+TGG - tig0029124:36333-36352 None:intergenic 40.0%
GGTATCTGCTCAACAAGTTA+TGG + tig0029124:36334-36353 Msa1440790:CDS 40.0%
GAGAAACTTCTCAAAGCTCA+AGG + tig0029124:36375-36394 Msa1440790:CDS 40.0%
! CTCAAAGCTCAAGGTTTTCA+AGG + tig0029124:36384-36403 Msa1440790:CDS 40.0%
! TCTGATTGTGAGGAGGATTT+TGG + tig0029124:45728-45747 Msa1440790:intron 40.0%
! TCCGGACAACATATTTTGTC+CGG - tig0029124:45960-45979 None:intergenic 40.0%
! AAACTTGGACTGGAGAATGT+TGG + tig0029124:46013-46032 Msa1440790:intron 40.0%
AGGATAGACTTCGAATTTGG+GGG + tig0029124:46042-46061 Msa1440790:intron 40.0%
! TTGTGGTGATGTGTAGTTGA+TGG + tig0029124:46142-46161 Msa1440790:intron 40.0%
!!! ACAGAGTTCTGGATGAGTTT+TGG + tig0029124:46311-46330 Msa1440790:intron 40.0%
TGCAAGGACCAAACATGATA+CGG + tig0029124:46348-46367 Msa1440790:intron 40.0%
!! GTGGCTTTAACAACTTATGG+AGG - tig0029124:46412-46431 None:intergenic 40.0%
CTCAGAGACGTAAACACAAT+TGG + tig0029124:39264-39283 Msa1440790:intron 40.0%
CACAGACCCTGATCAAATTA+AGG + tig0029124:39425-39444 Msa1440790:intron 40.0%
GGAAGTCTTTAACAAGATCG+AGG + tig0029124:46767-46786 Msa1440790:intron 40.0%
CGTTGGTATACTAGATCTTG+AGG + tig0029124:46832-46851 Msa1440790:intron 40.0%
CTGTGATGTAATTTCTCGGA+CGG + tig0029124:47119-47138 Msa1440790:CDS 40.0%
!! CAGGGATTTCTTTTGATGAC+AGG + tig0029124:39878-39897 Msa1440790:CDS 40.0%
GACAGACGAACAATCCATTA+TGG + tig0029124:47220-47239 Msa1440790:CDS 40.0%
CAGACGAACAATCCATTATG+GGG + tig0029124:47222-47241 Msa1440790:CDS 40.0%
AGACGAACAATCCATTATGG+GGG + tig0029124:47223-47242 Msa1440790:CDS 40.0%
TTGTAGTCATACCCCCATAA+TGG - tig0029124:39920-39939 None:intergenic 40.0%
CATGTAGACATCATTCACTC+AGG - tig0029124:47407-47426 None:intergenic 40.0%
ATGCTAGACAGAAGAACCAT+GGG + tig0029124:40126-40145 Msa1440790:intron 40.0%
TTTATACCTCATGTGTCCCA+TGG - tig0029124:47474-47493 None:intergenic 40.0%
TGATTCCCTCAAGTGAATCA+TGG - tig0029124:47863-47882 None:intergenic 40.0%
!! CGAGAAAAAGCACTGAAGAA+TGG + tig0029124:47891-47910 Msa1440790:CDS 40.0%
CCCACCAATGACGATTTATT+AGG + tig0029124:47918-47937 Msa1440790:CDS 40.0%
GCCTAATAAATCGTCATTGG+TGG - tig0029124:40441-40460 None:intergenic 40.0%
TTCATCTATCACATCTTGGG+TGG - tig0029124:48009-48028 None:intergenic 40.0%
!! TCAAGTTTGCTGGTTTGGAA+TGG + tig0029124:48065-48084 Msa1440790:CDS 40.0%
!! TTGGAATGGTGTTATTAGGC+AGG + tig0029124:48079-48098 Msa1440790:CDS 40.0%
TATTAGGCAGGTATCCTGAA+TGG + tig0029124:40611-40630 Msa1440790:intron 40.0%
GGGGTGAATCATAAACATAG+TGG + tig0029124:48282-48301 Msa1440790:intron 40.0%
AGAAGTGATTGAATGTGTGC+AGG + tig0029124:48347-48366 Msa1440790:intron 40.0%
TCATACTTCATCTCCTACCT+AGG - tig0029124:40888-40907 None:intergenic 40.0%
ATCTCCCCTAATTTCCTTCT+TGG - tig0029124:48494-48513 None:intergenic 40.0%
! GGTTACCATGATTTTGTACG+AGG + tig0029124:41134-41153 Msa1440790:intron 40.0%
TCAAATCCTTTCGAAGAGCT+CGG - tig0029124:41194-41213 None:intergenic 40.0%
AGGGAAATTTGTGTTCCTTC+AGG - tig0029124:41237-41256 None:intergenic 40.0%
CACCAAGATCATGATCTATG+GGG + tig0029124:41273-41292 Msa1440790:CDS 40.0%
CAAAGGAGTTCAAACCTGAA+AGG + tig0029124:41304-41323 Msa1440790:CDS 40.0%
!! AAACCTGAAAGGTTTGCTGA+AGG + tig0029124:48854-48873 Msa1440790:CDS 40.0%
ATTCCTTCAGCAAACCTTTC+AGG - tig0029124:48860-48879 None:intergenic 40.0%
CGCTATCTTTGCTTCCAATA+AGG - tig0029124:48960-48979 None:intergenic 40.0%
TTATGTGCATGTTCCTACCA+CGG + tig0029124:41485-41504 Msa1440790:CDS 40.0%
TACTTTGCAGCCAAAAAACG+GGG + tig0029124:49051-49070 Msa1440790:CDS 40.0%
! CCTGGAACATGATCAGTTTT+AGG - tig0029124:49302-49321 None:intergenic 40.0%
CCTAAAACTGATCATGTTCC+AGG + tig0029124:49299-49318 Msa1440790:three_prime_UTR 40.0%
!! AGGGCACTGTTGTCATTAAA+GGG + tig0029124:49319-49338 Msa1440790:three_prime_UTR 40.0%
!! GGAAGTGTTTGTGTTTCCCA+CGG + tig0029124:36260-36279 Msa1440790:CDS 45.0%
! GAAGTGTTTGTGTTTCCCAC+GGG + tig0029124:36261-36280 Msa1440790:CDS 45.0%
GATAGATGGTGCAGCTTCTT+TGG - tig0029124:36505-36524 None:intergenic 45.0%
TCCATTCCACAAGTCTTCTG+TGG + tig0029124:36610-36629 Msa1440790:intron 45.0%
CCATTCCACAAGTCTTCTGT+GGG + tig0029124:36611-36630 Msa1440790:intron 45.0%
AACCCCTGTTAGTAAACGGT+GGG + tig0029124:36663-36682 Msa1440790:intron 45.0%
ATCCCACCGTTTACTAACAG+GGG - tig0029124:36668-36687 None:intergenic 45.0%
CAATCCCACCGTTTACTAAC+AGG - tig0029124:36670-36689 None:intergenic 45.0%
GACCTTACAGGTGCAATAGT+AGG - tig0029124:36865-36884 None:intergenic 45.0%
ACCTGTAAGGTCCAATTGCA+CGG + tig0029124:36873-36892 Msa1440790:intron 45.0%
! TCCAATTGCACGGAGGATTT+TGG + tig0029124:36883-36902 Msa1440790:intron 45.0%
TCCAAAATCCTCCGTGCAAT+TGG - tig0029124:36887-36906 None:intergenic 45.0%
GGTGCGAGAGAAAAATTCGT+CGG + tig0029124:36970-36989 Msa1440790:intron 45.0%
TCGGAATTGAGCGAATGACT+TGG + tig0029124:36989-37008 Msa1440790:intron 45.0%
! AATTGAGCGAATGACTTGGC+AGG + tig0029124:36993-37012 Msa1440790:intron 45.0%
CACAGCTAGCTCCCAAATAT+TGG - tig0029124:37116-37135 None:intergenic 45.0%
CAATATTTGGGAGCTAGCTG+TGG + tig0029124:37114-37133 Msa1440790:intron 45.0%
GATGGATGCAAAGAGAGTAG+TGG - tig0029124:37299-37318 None:intergenic 45.0%
!! GGGAACTGTTGACTTTGAGA+TGG - tig0029124:37317-37336 None:intergenic 45.0%
GTACATGTTGGAGAAGCTCT+AGG - tig0029124:37379-37398 None:intergenic 45.0%
CCTATGTGTGACGTACATGT+TGG - tig0029124:37391-37410 None:intergenic 45.0%
CCAACATGTACGTCACACAT+AGG + tig0029124:37388-37407 Msa1440790:intron 45.0%
! TGAGAACGGTCACTTTGTGT+TGG - tig0029124:37434-37453 None:intergenic 45.0%
CTTCGAATCTGGTTGGCATA+GGG - tig0029124:37471-37490 None:intergenic 45.0%
ACTTCGAATCTGGTTGGCAT+AGG - tig0029124:37472-37491 None:intergenic 45.0%
! TCTGAGACTTCGAATCTGGT+TGG - tig0029124:37478-37497 None:intergenic 45.0%
!!! TTCCTTACATTTTGGGACGG+AGG + tig0029124:37796-37815 Msa1440790:intron 45.0%
AAGCAACGGGAAATGCTAAC+AGG + tig0029124:37998-38017 Msa1440790:intron 45.0%
GGAAATGCTAACAGGTGTCT+CGG + tig0029124:38006-38025 Msa1440790:intron 45.0%
GAAATGCTAACAGGTGTCTC+GGG + tig0029124:38007-38026 Msa1440790:intron 45.0%
AAATGCTAACAGGTGTCTCG+GGG + tig0029124:38008-38027 Msa1440790:intron 45.0%
TGTTTCAGAGTCGTGCTAAC+CGG - tig0029124:38179-38198 None:intergenic 45.0%
ATTGAAGGAGTCAGAGTCCA+AGG + tig0029124:38761-38780 Msa1440790:intron 45.0%
!! TTACGTCTCTGAGATCGATG+TGG - tig0029124:39257-39276 None:intergenic 45.0%
AACGCTCAAATACTTGGCGA+TGG - tig0029124:39496-39515 None:intergenic 45.0%
ATCGCCAAGTATTTGAGCGT+TGG + tig0029124:39495-39514 Msa1440790:CDS 45.0%
TTCTAGGTGGAATGCTGGAT+TGG - tig0029124:39568-39587 None:intergenic 45.0%
TGTCCGAGAAATGACATCAC+AGG - tig0029124:39804-39823 None:intergenic 45.0%
GTCATTTCTCGGACAGCATT+TGG + tig0029124:39809-39828 Msa1440790:CDS 45.0%
! TCACTCAAAGGCATATTGGC+AGG - tig0029124:40071-40090 None:intergenic 45.0%
CATGCTAGACAGAAGAACCA+TGG + tig0029124:40125-40144 Msa1440790:intron 45.0%
GCATACACGCCTAATCTGTA+TGG + tig0029124:40182-40201 Msa1440790:intron 45.0%
CATGCCGAAAAACAAGGACA+TGG + tig0029124:40479-40498 Msa1440790:CDS 45.0%
! AGAGACGACTTCAAGTTTGC+TGG + tig0029124:40573-40592 Msa1440790:intron 45.0%
!! CGACTTCAAGTTTGCTGGTT+TGG + tig0029124:40578-40597 Msa1440790:intron 45.0%
TGAGGTTTGGACTTGTGAGT+TGG + tig0029124:40787-40806 Msa1440790:intron 45.0%
AAACCTGAAAGGTTCGCTGA+AGG + tig0029124:41315-41334 Msa1440790:CDS 45.0%
ATTCCTTCAGCGAACCTTTC+AGG - tig0029124:41321-41340 None:intergenic 45.0%
GGAATTGCGATGGCTACAAA+AGG + tig0029124:41336-41355 Msa1440790:CDS 45.0%
!! TTCTAGGACCCCATCCAAAA+GGG - tig0029124:41377-41396 None:intergenic 45.0%
!! ATTCTAGGACCCCATCCAAA+AGG - tig0029124:41378-41397 None:intergenic 45.0%
TGGGGTCCTAGAATTTGTCT+TGG + tig0029124:41384-41403 Msa1440790:CDS 45.0%
GTCAAAGTAAGCACAGTGGT+AGG - tig0029124:41501-41520 None:intergenic 45.0%
CTCCAATATGAAGGTTGGGT+TGG + tig0029124:41699-41718 Msa1440790:intron 45.0%
!! CCATGGGTTTTTAAGCATGC+AGG - tig0029124:41899-41918 None:intergenic 45.0%
CCTGCATGCTTAAAAACCCA+TGG + tig0029124:41896-41915 Msa1440790:intron 45.0%
TTGCTGTACACCATCACCAT+GGG - tig0029124:41915-41934 None:intergenic 45.0%
ATTGCTGTACACCATCACCA+TGG - tig0029124:41916-41935 None:intergenic 45.0%
TGACGCAAGAACTTTGACAC+TGG + tig0029124:42212-42231 Msa1440790:intron 45.0%
TGTTGGACACCTAAACGAGT+CGG + tig0029124:42293-42312 Msa1440790:intron 45.0%
! TGATGGCGTTAAGAGACACA+TGG - tig0029124:42399-42418 None:intergenic 45.0%
GTGTCCGCTCACAATATAGT+GGG - tig0029124:42992-43011 None:intergenic 45.0%
TGTGTCCGCTCACAATATAG+TGG - tig0029124:42993-43012 None:intergenic 45.0%
! CTTGAATGACCCCACCTTTT+AGG + tig0029124:44087-44106 Msa1440790:intron 45.0%
GGTGTAGATGCAGACAACAA+AGG - tig0029124:44355-44374 None:intergenic 45.0%
TCATCCATGGTGTGTGAAGA+CGG - tig0029124:44376-44395 None:intergenic 45.0%
ACCATCATGGACGATGCAAT+TGG + tig0029124:44420-44439 Msa1440790:intron 45.0%
CCATCATGGACGATGCAATT+GGG + tig0029124:44421-44440 Msa1440790:intron 45.0%
GATCTAGTTGCACCCCAAAA+TGG - tig0029124:44888-44907 None:intergenic 45.0%
GGGGTGCAACTAGATCATTA+TGG + tig0029124:44892-44911 Msa1440790:intron 45.0%
! AGCTTCTTTGGAGAGACCAA+TGG - tig0029124:36493-36512 None:intergenic 45.0%
GATAGATGGTGCAGCTTCTT+TGG - tig0029124:36505-36524 None:intergenic 45.0%
GAGACAATGATTGTGAGACG+AGG + tig0029124:45616-45635 Msa1440790:intron 45.0%
ACATGTAGGGTCTGATTGTG+AGG + tig0029124:45718-45737 Msa1440790:intron 45.0%
TCTTGTGTTTGCTCGAAAGC+CGG + tig0029124:45938-45957 Msa1440790:intron 45.0%
GCCGGACAAAATATGTTGTC+CGG + tig0029124:45956-45975 Msa1440790:intron 45.0%
TCTTCCCACTTATCAGCAAC+TGG - tig0029124:46441-46460 None:intergenic 45.0%
AGTTGCTGATAAGTGGGAAG+AGG + tig0029124:46440-46459 Msa1440790:intron 45.0%
! TTACGTCTCTGAGAGCAATG+TGG - tig0029124:46577-46596 None:intergenic 45.0%
TGTTGTACCCTCCCATAAGA+AGG - tig0029124:46712-46731 None:intergenic 45.0%
GGGTCTGTGATGATAACTCT+TGG - tig0029124:39414-39433 None:intergenic 45.0%
ATCGCCAAGTATTTGAGCGT+TGG + tig0029124:39495-39514 Msa1440790:CDS 45.0%
TTCTAGGTGGAATGCTGGAT+TGG - tig0029124:39568-39587 None:intergenic 45.0%
CGTCCGAGAAATTACATCAC+AGG - tig0029124:47121-47140 None:intergenic 45.0%
GTAATTTCTCGGACGGCATT+TGG + tig0029124:47126-47145 Msa1440790:CDS 45.0%
ATTGGCAGGACAACAACAGT+TGG - tig0029124:47381-47400 None:intergenic 45.0%
CATCATTCACTCAGGCAGAT+TGG - tig0029124:47399-47418 None:intergenic 45.0%
CATGCTAGACAGAAGAACCA+TGG + tig0029124:40125-40144 Msa1440790:intron 45.0%
CATGCTGAAAGTCAAGGACA+TGG + tig0029124:47960-47979 Msa1440790:CDS 45.0%
! AGAGACCACTTCAAGTTTGC+TGG + tig0029124:48055-48074 Msa1440790:CDS 45.0%
CCAAACCAGCAAACTTGAAG+TGG - tig0029124:40581-40600 None:intergenic 45.0%
!! CCACTTCAAGTTTGCTGGTT+TGG + tig0029124:48060-48079 Msa1440790:CDS 45.0%
TGGCTTAATGATGCTGCACT+AGG + tig0029124:48322-48341 Msa1440790:intron 45.0%
! GGAAACCTTTTGCTACCTGA+AGG + tig0029124:48758-48777 Msa1440790:CDS 45.0%
GTGTTCCTTCAGGTAGCAAA+AGG - tig0029124:48766-48785 None:intergenic 45.0%
! GTTTGCTGAAGGAATTGCGA+AGG + tig0029124:48865-48884 Msa1440790:CDS 45.0%
GGAATTGCGAAGGCAACAAA+AGG + tig0029124:48875-48894 Msa1440790:CDS 45.0%
!! TTCTAGGACCCCATCCAAAA+GGG - tig0029124:41377-41396 None:intergenic 45.0%
!! ATTCTAGGACCCCATCCAAA+AGG - tig0029124:41378-41397 None:intergenic 45.0%
TGGGGTCCTAGAATTTGTCT+TGG + tig0029124:41384-41403 Msa1440790:CDS 45.0%
!!! ATGATGCTTGCCCCGTTTTT+TGG - tig0029124:49064-49083 None:intergenic 45.0%
CTTTAATGACAACAGTGCCC+TGG - tig0029124:49320-49339 None:intergenic 45.0%
!! CAGGGCACTGTTGTCATTAA+AGG + tig0029124:49318-49337 Msa1440790:three_prime_UTR 45.0%
!!! AATGTTAATTTTTTTTTTTA+AGG - tig0029124:37625-37644 None:intergenic 5.0%
!!! TATTTTTTTTTAACTTTTTA+TGG - tig0029124:38102-38121 None:intergenic 5.0%
!! TTAATAAATATATGTAATTA+AGG + tig0029124:43663-43682 Msa1440790:intron 5.0%
!! TAATAAATATATGTAATTAA+GGG + tig0029124:43664-43683 Msa1440790:intron 5.0%
!!! AAATTTTAATTTTACAATAA+GGG + tig0029124:44854-44873 Msa1440790:intron 5.0%
!!! TTTTAAAATTTCAATTAAAA+GGG + tig0029124:45667-45686 Msa1440790:intron 5.0%
!!! TATTTATATTTTAAAAATAG+GGG + tig0029124:45779-45798 Msa1440790:intron 5.0%
CCCACAGAAGACTTGTGGAA+TGG - tig0029124:36614-36633 None:intergenic 50.0%
TTCCACAAGTCTTCTGTGGG+AGG + tig0029124:36614-36633 Msa1440790:intron 50.0%
TCCACAAGTCTTCTGTGGGA+GGG + tig0029124:36615-36634 Msa1440790:intron 50.0%
GAACCCCTGTTAGTAAACGG+TGG + tig0029124:36662-36681 Msa1440790:intron 50.0%
TCCGTGCAATTGGACCTTAC+AGG - tig0029124:36877-36896 None:intergenic 50.0%
TGTAAGGTCCAATTGCACGG+AGG + tig0029124:36876-36895 Msa1440790:intron 50.0%
TTGGGAGCTAGCTGTGGATA+AGG + tig0029124:37120-37139 Msa1440790:intron 50.0%
CTTGTGTTGAGTTTGTGCGG+AGG - tig0029124:37183-37202 None:intergenic 50.0%
CTCCTCCGTCCCAAAATGTA+AGG - tig0029124:37801-37820 None:intergenic 50.0%
! CAAATGCTTCAGAGCACCAC+CGG + tig0029124:38157-38176 Msa1440790:intron 50.0%
GGTGCACTTGAATTTGCCCA+AGG + tig0029124:38236-38255 Msa1440790:intron 50.0%
TAGCTCTCTTGGCTGAGCTA+AGG + tig0029124:38737-38756 Msa1440790:intron 50.0%
AGCTCTCTTGGCTGAGCTAA+GGG + tig0029124:38738-38757 Msa1440790:intron 50.0%
TGGCTGAGCTAAGGGATTGA+AGG + tig0029124:38746-38765 Msa1440790:intron 50.0%
GAGTCAGAGTCCAAGGTTTG+AGG + tig0029124:38768-38787 Msa1440790:intron 50.0%
!! GGATTTTGGAGGGGAGAGAA+GGG - tig0029124:38827-38846 None:intergenic 50.0%
! CGAGAAGAGCTGAAAGTGCA+AGG + tig0029124:39158-39177 Msa1440790:intron 50.0%
TTTGGAAGCAGCTACGCAGA+AGG + tig0029124:39827-39846 Msa1440790:CDS 50.0%
TTTAGACCTCGTGTGTCCCA+TGG - tig0029124:40145-40164 None:intergenic 50.0%
!! GGACAATGGTGCTATTAGGC+AGG + tig0029124:40599-40618 Msa1440790:intron 50.0%
TGGCTTACTGATGCTGCACT+AGG + tig0029124:40807-40826 Msa1440790:intron 50.0%
CCTGCATAGATGGTCCTAGT+GGG - tig0029124:40913-40932 None:intergenic 50.0%
TCCTGCATAGATGGTCCTAG+TGG - tig0029124:40914-40933 None:intergenic 50.0%
ACTAGGACCATCTATGCAGG+AGG + tig0029124:40913-40932 Msa1440790:intron 50.0%
CTAGGACCATCTATGCAGGA+GGG + tig0029124:40914-40933 Msa1440790:intron 50.0%
CTAGTTCCCTCCTGCATAGA+TGG - tig0029124:40923-40942 None:intergenic 50.0%
TCTATGCAGGAGGGAACTAG+TGG + tig0029124:40923-40942 Msa1440790:intron 50.0%
CTTCAACCGAGCTCTTCGAA+AGG + tig0029124:41185-41204 Msa1440790:CDS 50.0%
CGCCCCATAGATCATGATCT+TGG - tig0029124:41278-41297 None:intergenic 50.0%
TCTATGGGGCGATGATGCAA+AGG + tig0029124:41287-41306 Msa1440790:CDS 50.0%
GTTCGCTGAAGGAATTGCGA+TGG + tig0029124:41326-41345 Msa1440790:CDS 50.0%
TGGCGTCAAAGTAAGCACAG+TGG - tig0029124:41505-41524 None:intergenic 50.0%
CGGATGTGTCAGAGTCATGT+CGG + tig0029124:42270-42289 Msa1440790:intron 50.0%
TGTCAGAGTCATGTCGGTGT+TGG + tig0029124:42276-42295 Msa1440790:intron 50.0%
! GGTGGGGTCATTCAAGTTCA+AGG - tig0029124:44083-44102 None:intergenic 50.0%
TACACCGTCTTCACACACCA+TGG + tig0029124:44369-44388 Msa1440790:intron 50.0%
CCCAATTGCATCGTCCATGA+TGG - tig0029124:44424-44443 None:intergenic 50.0%
TGTAGGGTCTGATTGTGAGG+AGG + tig0029124:45721-45740 Msa1440790:intron 50.0%
CTGGAGAATGTTGGACCCTT+AGG + tig0029124:46022-46041 Msa1440790:intron 50.0%
! GCTAGCTTCTGCACTGAACT+AGG - tig0029124:46072-46091 None:intergenic 50.0%
TTGCAACTGTGGGAGAATGC+AGG - tig0029124:47015-47034 None:intergenic 50.0%
TTTGGAAGCAGCTACGCAGA+AGG + tig0029124:39827-39846 Msa1440790:CDS 50.0%
ATTCACTCAGGCAGATTGGC+AGG - tig0029124:47395-47414 None:intergenic 50.0%
GAAGAACCATGGGACACATG+AGG + tig0029124:47465-47484 Msa1440790:intron 50.0%
TGAATGGCAAGCACGTGCAA+GGG + tig0029124:40627-40646 Msa1440790:CDS 50.0%
TGGGGTTTGGACTTGTGAGT+TGG + tig0029124:48302-48321 Msa1440790:intron 50.0%
CTCACTAGGACCATCTATGC+AGG + tig0029124:48447-48466 Msa1440790:intron 50.0%
ACTAGGACCATCTATGCAGG+AGG + tig0029124:40913-40932 Msa1440790:intron 50.0%
CTAGGACCATCTATGCAGGA+GGG + tig0029124:40914-40933 Msa1440790:intron 50.0%
CTAGTTCCCTCCTGCATAGA+TGG - tig0029124:40923-40942 None:intergenic 50.0%
TCTATGCAGGAGGGAACTAG+TGG + tig0029124:40923-40942 Msa1440790:intron 50.0%
CTTCAACCGAGCTCTTCGAA+AGG + tig0029124:41185-41204 Msa1440790:CDS 50.0%
CGCCCCATAGATCATGATCT+TGG - tig0029124:41278-41297 None:intergenic 50.0%
TCTATGGGGCGATGATGCAA+AGG + tig0029124:41287-41306 Msa1440790:CDS 50.0%
! TGCAAAGTAAGCACCGTGGT+AGG - tig0029124:49040-49059 None:intergenic 50.0%
ACCCTCCCACAGAAGACTTG+TGG - tig0029124:36619-36638 None:intergenic 55.0%
TGTGCGGAGGCAAGCAAATG+AGG - tig0029124:37170-37189 None:intergenic 55.0%
TTCAGAGTCGTGCTAACCGG+TGG - tig0029124:38176-38195 None:intergenic 55.0%
AACAAGCCCTACCTTCCCCT+TGG + tig0029124:38706-38725 Msa1440790:intron 55.0%
ACAAGCCCTACCTTCCCCTT+GGG + tig0029124:38707-38726 Msa1440790:intron 55.0%
AGAGCTATCCATCCCCCAAG+GGG - tig0029124:38724-38743 None:intergenic 55.0%
GAGAGCTATCCATCCCCCAA+GGG - tig0029124:38725-38744 None:intergenic 55.0%
AGAGAGCTATCCATCCCCCA+AGG - tig0029124:38726-38745 None:intergenic 55.0%
TGGGGGATGGATAGCTCTCT+TGG + tig0029124:38726-38745 Msa1440790:intron 55.0%
!! GGGATTTTGGAGGGGAGAGA+AGG - tig0029124:38828-38847 None:intergenic 55.0%
TCAGCTCTTCTCGCTCTGTC+AGG - tig0029124:39151-39170 None:intergenic 55.0%
GAAGAACCATGGGACACACG+AGG + tig0029124:40136-40155 Msa1440790:intron 55.0%
AAGTCGTCTCTTGCCCAGCA+AGG - tig0029124:40564-40583 None:intergenic 55.0%
CTTGCACGTGCTTGCCATTC+AGG - tig0029124:40628-40647 None:intergenic 55.0%
CTGAATGGCAAGCACGTGCA+AGG + tig0029124:40626-40645 Msa1440790:CDS 55.0%
CCCACTAGGACCATCTATGC+AGG + tig0029124:40910-40929 Msa1440790:intron 55.0%
! GTCTGGCATCCGACTCGTTT+AGG - tig0029124:42305-42324 None:intergenic 55.0%
AAGTGGTCTCTTGCCCAGCA+AGG - tig0029124:48046-48065 None:intergenic 55.0%
CTTGCACGTGCTTGCCATTC+AGG - tig0029124:40628-40647 None:intergenic 55.0%
CTGAATGGCAAGCACGTGCA+AGG + tig0029124:40626-40645 Msa1440790:CDS 55.0%
! TGGCTGCAAAGTAAGCACCG+TGG - tig0029124:49044-49063 None:intergenic 55.0%
TAACAGGTGTCTCGGGGCGT+TGG + tig0029124:38014-38033 Msa1440790:intron 60.0%
CAAGCCCTACCTTCCCCTTG+GGG + tig0029124:38708-38727 Msa1440790:intron 60.0%
AAGCCCTACCTTCCCCTTGG+GGG + tig0029124:38709-38728 Msa1440790:intron 60.0%
CATCCCCCAAGGGGAAGGTA+GGG - tig0029124:38715-38734 None:intergenic 60.0%
CTATCCATCCCCCAAGGGGA+AGG - tig0029124:38720-38739 None:intergenic 60.0%
ATGGCAAGCACGTGCAAGGC+AGG + tig0029124:40630-40649 Msa1440790:CDS 60.0%
CCATCCCCCAAGGGGAAGGT+AGG - tig0029124:38716-38735 None:intergenic 65.0%
CCTACCTTCCCCTTGGGGGA+TGG + tig0029124:38713-38732 Msa1440790:intron 65.0%
Chromosome Type Strat End Strand Name
tig0029124 gene 36224 49373 36224 ID=Msa1440790;Name=Msa1440790
tig0029124 mRNA 36224 49373 36224 ID=Msa1440790-mRNA-1;Parent=Msa1440790;Name=Msa1440790-mRNA-1;_AED=0.16;_eAED=0.16;_QI=34|0.44|0.4|1|1|1|10|274|829
tig0029124 exon 36224 36558 36224 ID=Msa1440790-mRNA-1:exon:12420;Parent=Msa1440790-mRNA-1
tig0029124 exon 39430 39596 39430 ID=Msa1440790-mRNA-1:exon:12421;Parent=Msa1440790-mRNA-1
tig0029124 exon 39686 39927 39686 ID=Msa1440790-mRNA-1:exon:12422;Parent=Msa1440790-mRNA-1
tig0029124 exon 40328 40506 40328 ID=Msa1440790-mRNA-1:exon:12423;Parent=Msa1440790-mRNA-1
tig0029124 exon 40617 40714 40617 ID=Msa1440790-mRNA-1:exon:12424;Parent=Msa1440790-mRNA-1
tig0029124 exon 41135 41556 41135 ID=Msa1440790-mRNA-1:exon:12425;Parent=Msa1440790-mRNA-1
tig0029124 exon 45042 45162 45042 ID=Msa1440790-mRNA-1:exon:12426;Parent=Msa1440790-mRNA-1
tig0029124 exon 47003 47244 47003 ID=Msa1440790-mRNA-1:exon:12427;Parent=Msa1440790-mRNA-1
tig0029124 exon 47809 48100 47809 ID=Msa1440790-mRNA-1:exon:12428;Parent=Msa1440790-mRNA-1
tig0029124 exon 48674 49373 48674 ID=Msa1440790-mRNA-1:exon:12429;Parent=Msa1440790-mRNA-1
tig0029124 five_prime_UTR 36224 36257 36224 ID=Msa1440790-mRNA-1:five_prime_utr;Parent=Msa1440790-mRNA-1
tig0029124 CDS 36258 36558 36258 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 39430 39596 39430 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 39686 39927 39686 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 40328 40506 40328 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 40617 40714 40617 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 41135 41556 41135 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 45042 45162 45042 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 47003 47244 47003 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 47809 48100 47809 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 CDS 48674 49099 48674 ID=Msa1440790-mRNA-1:cds;Parent=Msa1440790-mRNA-1
tig0029124 three_prime_UTR 49100 49373 49100 ID=Msa1440790-mRNA-1:three_prime_utr;Parent=Msa1440790-mRNA-1
Gene Sequence

>Msa1440790

ATGGAAGTGTTTGTGTTTCCCACGGGAACAACAATAATCATCTCTGTTCTGTCAGTTCTACTTGCTGTGATTCCATGGTATCTGCTCAACAAGTTATGGCTTAAGCCAAAGAGGTTTGAGAAACTTCTCAAAGCTCAAGGTTTTCAAGGTGAACCATATAACCTCTCAGTATTAATGGACAAATCAAGACAAAATTATATGTTGCAGTTGCAACAAGAAGATAAATCTAAATTCATTGGTCTCTCCAAAGAAGCTGCACCATCTATCTTCACTCATGTTCATCAAACTGTACACAAATATGACCCTGATCAAATTAAGGAAGTATTTAACAAGATCGAGGACTTCCCTAAACCAATATTAAAATCCATCGCCAAGTATTTGAGCGTTGGTATTATAGATTATGAGGGTAAGAAATGGGCTAAACATAGGAAGATTGCCAATCCAGCATTCCACCTAGAAAAATTGAAAGGTATGCTGCCTGCATTTTCTCACAGTTGCAATGAAATGATAAGCAAATGGAAGGAATTATTGTCATCAGATGGAACATGTGAGCTTGATGTTTGGCCTTTCCTTCAGAATTTTACCTGTGATGTCATTTCTCGGACAGCATTTGGAAGCAGCTACGCAGAAGGAACAAAACTATTTCAACTTCTAAAGAAGCAGGGATTTCTTTTGATGACAGGGCTACAGACGAACAATTCATTATGGGGGCTTCTAGCAACAACTACCAAGACGAAGATGAAAGAAGTTGATAGGGAAATCCATGATTCACTTGAGGGAATTATTGAAAAACGAGAAAAAGCAATGAAGAATGGTGAAACCACCAATGACGATTTATTAGGCATTCTTTTGGAATCAAATCATGCCGAAAAACAAGGACATGGAAATAGCAGGTATCCTGAATGGCAAGCACGTGCAAGGCAGGAAGTTTTGCAAGTTTTTGGGAACCAAAATCCAAACAACGAAGGATTAAGTCAACTTAAAACTGTTACCATGATTTTGTACGAGGTACTAAGGTTATTCCCACCTTTAATTTACTTCAACCGAGCTCTTCGAAAGGATTTGAAACTTGGAAACGTTTCCCTACCTGAAGGAACACAAATTTCCCTACCAATACTATTGATTCACCAAGATCATGATCTATGGGGCGATGATGCAAAGGAGTTCAAACCTGAAAGGTTCGCTGAAGGAATTGCGATGGCTACAAAAGGAAAAGTTTGTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTCTTGGACAAAACTTTGCCTTACTAGAAGCAAAGATAGCAATTTCATTGCTGCTGCAGAATTTCTCATTCGAACTTTCTCCAAATTATGTGCATGTTCCTACCACTGTGCTTACTTTGACGCCAAAAAATGGGGCAAGCATCATTTTGCATAAACTAACAACAATACTCATCTGTATTTTGTCAGTTCTACTTGCTGTGATTCCATGGTATCTGCTCAACAAGTTATGGCTTAAGCCAAAGTGTTTGAGAAACTTCTCAAAGCTCAAGGTTTTCAAGGGTATGCTGCCTGCATTCTCCCACAGTTGCAATGAAATGATAAGCAAATGGAAGGAATTATTGTCATCAGATGGAACATGTGAGATTGATGTTTGGCCTTTCCTTCAGAATTTTACCTGTGATGTAATTTCTCGGACGGCATTTGGAAGCAGCTACGCAGAAGGAACAAAACTATTTCAACTTCTAAAGAAGCAGGGATTTCTTTTGATGACAGGGCGACAGACGAACAATCCATTATGGGGGCTACTAGCAACAACTACCAAGACGAAGATGAAAGAAATTGATAGAGAAATCCATGATTCACTTGAGGGAATCATTGAAAAGCGAGAAAAAGCACTGAAGAATGGTGAACCCACCAATGACGATTTATTAGGCATTCTTTTGCAATCAAATCATGCTGAAAGTCAAGGACATGGAAATAGTAAGAGTATTGGGATGACCACCCAAGATGTGATAGATGAATGCAAATTGTTTTACCTTGCTGGGCAAGAGACCACTTCAAGTTTGCTGGTTTGGAATGGTGTTATTAGGCAGGTTACCATGATTTTGTACGAGGTACTAAGGTTATTCCCACCATTAATTTACTTCAACCGAGCTCTTCGAAAGGATTTGAAACTTGGAAACCTTTTGCTACCTGAAGGAACACAAATTTCCCTACCAATACTATTGATTCACCAAGATCATGATCTATGGGGCGATGATGCAAAGGAGTTCAAACCTGAAAGGTTTGCTGAAGGAATTGCGAAGGCAACAAAAGGACAAGTTTCTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTCTTGGACAAAACTTTGCCTTATTGGAAGCAAAGATAGCGATATCACTGTTGCTGCAGAATTTCTCATTTGAACTTTCTCCAAATTATGTGCATGTTCCTACCACGGTGCTTACTTTGCAGCCAAAAAACGGGGCAAGCATCATTCTGCATAAACTGTAA
Protein sequence

>Msa1440790

MEVFVFPTGTTIIISVLSVLLAVIPWYLLNKLWLKPKRFEKLLKAQGFQGEPYNLSVLMDKSRQNYMLQLQQEDKSKFIGLSKEAAPSIFTHVHQTVHKYDPDQIKEVFNKIEDFPKPILKSIAKYLSVGIIDYEGKKWAKHRKIANPAFHLEKLKGMLPAFSHSCNEMISKWKELLSSDGTCELDVWPFLQNFTCDVISRTAFGSSYAEGTKLFQLLKKQGFLLMTGLQTNNSLWGLLATTTKTKMKEVDREIHDSLEGIIEKREKAMKNGETTNDDLLGILLESNHAEKQGHGNSRYPEWQARARQEVLQVFGNQNPNNEGLSQLKTVTMILYEVLRLFPPLIYFNRALRKDLKLGNVSLPEGTQISLPILLIHQDHDLWGDDAKEFKPERFAEGIAMATKGKVCYFPFGWGPRICLGQNFALLEAKIAISLLLQNFSFELSPNYVHVPTTVLTLTPKNGASIILHKLTTILICILSVLLAVIPWYLLNKLWLKPKCLRNFSKLKVFKGMLPAFSHSCNEMISKWKELLSSDGTCEIDVWPFLQNFTCDVISRTAFGSSYAEGTKLFQLLKKQGFLLMTGRQTNNPLWGLLATTTKTKMKEIDREIHDSLEGIIEKREKALKNGEPTNDDLLGILLQSNHAESQGHGNSKSIGMTTQDVIDECKLFYLAGQETTSSLLVWNGVIRQVTMILYEVLRLFPPLIYFNRALRKDLKLGNLLLPEGTQISLPILLIHQDHDLWGDDAKEFKPERFAEGIAKATKGQVSYFPFGWGPRICLGQNFALLEAKIAISLLLQNFSFELSPNYVHVPTTVLTLQPKNGASIILHKL*