AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183770 MtrunA17_Chr2g0324011 63.495 578 210 1 7 583 10 587 0.0 792
Msa1183770 MtrunA17_Chr3g0082121 44.793 605 318 5 2 603 38 629 0.0 536
Msa1183770 MtrunA17_Chr1g0203721 36.321 636 400 4 3 634 59 693 1.42e-151 464
Msa1183770 MtrunA17_Chr7g0258861 68.421 285 86 3 7 287 10 294 1.19e-137 408
Msa1183770 MtrunA17_Chr6g0458391 35.221 565 345 4 2 564 220 765 1.94e-130 405
Msa1183770 MtrunA17_Chr6g0458391 39.394 132 77 3 6 135 90 220 3.86e-21 99.0
Msa1183770 MtrunA17_Chr5g0448761 34.501 571 362 7 7 567 60 628 5.27e-117 370
Msa1183770 MtrunA17_Chr8g0363841 33.106 586 376 8 9 585 19 597 4.08e-109 347
Msa1183770 MtrunA17_Chr2g0287651 31.976 663 415 12 2 651 70 709 2.13e-106 345
Msa1183770 MtrunA17_Chr1g0202341 32.042 568 367 9 7 564 51 609 2.99e-106 339
Msa1183770 MtrunA17_Chr1g0164591 47.452 314 156 2 84 397 3 307 4.75e-100 311
Msa1183770 MtrunA17_Chr2g0329031 30.211 662 424 14 7 652 14 653 1.96e-94 310
Msa1183770 MtrunA17_Chr1g0207551 30.318 597 399 9 7 598 34 618 1.08e-89 299
Msa1183770 MtrunA17_Chr3g0080351 28.892 668 424 15 4 652 73 708 2.50e-86 290
Msa1183770 MtrunA17_Chr5g0441581 29.984 637 406 15 7 622 32 649 1.11e-84 282
Msa1183770 MtrunA17_Chr5g0440451 29.457 645 401 14 7 623 43 661 2.30e-82 281
Msa1183770 MtrunA17_Chr1g0203051 29.295 553 361 8 13 551 85 621 1.32e-79 268
Msa1183770 MtrunA17_Chr2g0287061 29.760 625 379 16 7 620 183 758 3.20e-78 268
Msa1183770 MtrunA17_Chr2g0287061 38.835 103 48 3 7 107 29 118 1.34e-13 74.7
Msa1183770 MtrunA17_Chr2g0296781 29.840 563 379 10 11 564 1 556 4.89e-76 260
Msa1183770 MtrunA17_Chr5g0448511 29.198 524 359 6 167 689 1 513 1.25e-74 251
Msa1183770 MtrunA17_Chr3g0118611 33.254 421 273 5 183 601 122 536 2.30e-72 251
Msa1183770 MtrunA17_Chr2g0291581 28.720 578 379 9 6 570 70 627 7.88e-70 242
Msa1183770 MtrunA17_Chr1g0196541 25.467 750 523 16 11 747 1 727 4.54e-69 241
Msa1183770 MtrunA17_Chr6g0477261 30.290 449 292 6 129 564 5 445 7.10e-67 233
Msa1183770 MtrunA17_Chr2g0276841 28.125 576 384 13 2 561 65 626 1.15e-65 231
Msa1183770 MtrunA17_Chr2g0294841 26.948 616 411 14 2 596 40 637 1.55e-61 221
Msa1183770 MtrunA17_Chr1g0198761 26.224 572 386 11 10 559 50 607 2.49e-61 220
Msa1183770 MtrunA17_Chr2g0291591 27.200 500 344 9 7 497 64 552 2.75e-60 213
Msa1183770 MtrunA17_Chr2g0290391 24.662 592 406 11 6 575 50 623 1.06e-52 194
Msa1183770 MtrunA17_Chr5g0431001 27.078 421 289 8 6 411 60 477 9.28e-45 168
Msa1183770 MtrunA17_Chr7g0238821 56.604 106 45 1 11 115 1 106 4.69e-32 120
Msa1183770 MtrunA17_Chr1g0149131 44.144 111 62 0 285 395 2 112 5.74e-30 114
Msa1183770 MtrunA17_Chr2g0308841 25.221 226 168 1 339 563 1 226 1.23e-23 101
Msa1183770 MtrunA17_Chr5g0401121 44.348 115 60 3 3 114 52 165 3.08e-23 97.1
Msa1183770 MtrunA17_Chr4g0033611 44.118 102 54 3 7 106 76 176 5.43e-17 81.6
Msa1183770 MtrunA17_Chr2g0329421 39.815 108 62 3 1 106 21 127 2.88e-15 75.5
Msa1183770 MtrunA17_Chr2g0329361 42.991 107 57 3 7 109 61 167 5.83e-15 75.5
Msa1183770 MtrunA17_Chr7g0233911 40.777 103 58 3 7 106 34 136 1.43e-13 70.5
Msa1183770 MtrunA17_Chr3g0078041 40.777 103 58 3 7 106 50 152 1.15e-12 68.2
Msa1183770 MtrunA17_Chr6g0475591 35.135 74 48 0 140 213 2 75 5.57e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183770 AT4G38180.1 33.860 570 369 6 7 570 73 640 2.90e-114 364
Msa1183770 AT4G15090.1 31.438 598 400 6 7 601 51 641 1.75e-104 339
Msa1183770 AT4G15090.5 31.438 598 400 6 7 601 51 641 1.75e-104 339
Msa1183770 AT4G15090.3 31.438 598 400 6 7 601 51 641 1.75e-104 339
Msa1183770 AT4G15090.2 31.438 598 400 6 7 601 51 641 1.75e-104 339
Msa1183770 AT4G15090.4 31.438 598 400 6 7 601 51 641 1.75e-104 339
Msa1183770 AT1G76320.3 31.879 596 385 10 11 603 1 578 1.17e-92 303
Msa1183770 AT1G76320.2 31.879 596 385 10 11 603 1 578 2.21e-92 304
Msa1183770 AT1G76320.1 31.879 596 385 10 11 603 1 578 2.81e-92 304
Msa1183770 AT1G76320.4 31.879 596 385 10 11 603 1 578 2.81e-92 304
Msa1183770 AT3G22170.2 31.018 619 376 14 3 603 66 651 2.77e-88 296
Msa1183770 AT3G22170.1 31.018 619 376 14 3 603 66 651 2.77e-88 296
Msa1183770 AT2G27110.2 30.240 625 398 10 7 627 49 639 1.73e-81 278
Msa1183770 AT2G27110.1 30.240 625 398 10 7 627 49 639 1.73e-81 278
Msa1183770 AT3G06250.2 27.929 623 389 12 7 620 190 761 3.24e-80 273
Msa1183770 AT3G06250.2 38.235 102 48 3 7 106 28 116 1.33e-11 68.6
Msa1183770 AT3G06250.1 27.929 623 389 12 7 620 190 761 3.24e-80 273
Msa1183770 AT3G06250.1 38.235 102 48 3 7 106 28 116 1.33e-11 68.6
Msa1183770 AT3G06250.3 27.929 623 389 12 7 620 190 761 3.24e-80 273
Msa1183770 AT3G06250.3 38.235 102 48 3 7 106 28 116 1.33e-11 68.6
Msa1183770 AT5G18960.2 27.787 619 398 12 7 620 211 785 1.13e-75 261
Msa1183770 AT5G18960.2 40.196 102 46 3 7 106 43 131 1.41e-12 71.6
Msa1183770 AT5G18960.1 27.787 619 398 12 7 620 211 785 1.13e-75 261
Msa1183770 AT5G18960.1 40.196 102 46 3 7 106 43 131 1.41e-12 71.6
Msa1183770 AT2G27110.3 30.901 466 315 4 163 627 35 494 4.23e-70 244
Msa1183770 AT4G19990.3 27.723 606 369 11 10 592 24 583 1.45e-68 240
Msa1183770 AT4G19990.4 27.723 606 369 11 10 592 24 583 1.45e-68 240
Msa1183770 AT4G19990.5 27.723 606 369 11 10 592 24 583 1.78e-68 240
Msa1183770 AT4G19990.6 27.409 602 376 10 10 592 24 583 1.96e-68 240
Msa1183770 AT4G19990.2 27.409 602 376 10 10 592 24 583 1.96e-68 240
Msa1183770 AT4G19990.7 27.723 606 369 11 10 592 38 597 2.29e-68 240
Msa1183770 AT4G38170.1 31.731 416 262 9 183 592 21 420 1.37e-65 228
Msa1183770 AT2G32250.5 27.649 604 370 11 10 603 41 587 1.55e-64 229
Msa1183770 AT2G32250.2 27.649 604 370 11 10 603 41 587 2.59e-64 229
Msa1183770 AT2G32250.4 27.649 604 370 11 10 603 41 587 2.59e-64 229
Msa1183770 AT2G32250.6 27.649 604 370 11 10 603 41 587 2.68e-64 229
Msa1183770 AT2G32250.1 27.649 604 370 11 10 603 41 587 2.68e-64 229
Msa1183770 AT2G32250.3 27.649 604 370 11 10 603 41 587 2.68e-64 229
Msa1183770 AT2G32250.7 27.529 603 370 11 11 603 1 546 1.25e-63 227
Msa1183770 AT2G32250.8 27.529 603 370 11 11 603 1 546 1.27e-63 227
Msa1183770 AT4G19990.1 27.368 570 346 10 45 592 3 526 2.95e-63 224
Msa1183770 AT1G52520.1 27.700 574 379 12 5 562 83 636 5.05e-63 224
Msa1183770 AT1G80010.1 27.504 589 398 14 7 576 95 673 1.03e-62 223
Msa1183770 AT1G10240.2 27.288 612 413 17 4 600 45 639 5.98e-60 215
Msa1183770 AT1G10240.1 27.288 612 413 17 4 600 45 639 5.98e-60 215
Msa1183770 AT5G28530.1 23.590 585 402 11 6 563 54 620 9.49e-50 186
Msa1183770 AT5G28530.3 23.761 585 397 12 6 563 54 616 1.74e-49 185
Msa1183770 AT5G28530.2 23.761 585 397 12 6 563 54 616 1.74e-49 185
Msa1183770 AT5G28530.4 23.028 317 216 5 258 563 258 557 2.91e-23 105
Msa1183770 AT5G28530.4 26.901 171 117 5 6 169 54 223 1.00e-12 72.0
Msa1183770 AT5G28530.5 23.344 317 211 6 258 563 258 553 4.81e-23 104
Msa1183770 AT5G28530.5 26.901 171 117 5 6 169 54 223 1.11e-12 72.0
Msa1183770 AT3G59470.3 42.308 104 57 3 5 106 68 170 3.64e-16 79.3
Msa1183770 AT3G59470.1 42.308 104 57 3 5 106 68 170 3.64e-16 79.3
Msa1183770 AT3G59470.2 42.308 104 57 3 5 106 80 182 5.19e-16 79.3
Msa1183770 AT2G43280.1 39.231 130 72 5 7 131 22 149 3.92e-14 72.4
Msa1183770 AT3G07500.1 38.136 118 60 3 7 111 33 150 4.57e-14 72.4
Msa1183770 AT4G12850.1 37.405 131 73 5 5 130 9 135 5.26e-13 68.6
Msa1183770 AT4G12850.2 40.566 106 58 3 5 108 9 111 1.25e-12 66.2
Msa1183770 AT4G12850.4 38.095 126 71 4 5 126 9 131 2.26e-12 65.5

Find 261 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTAGACTATGGTTATTT+TGG 0.110064 8_1:+19180062 Msa1183770:CDS
CTGTTCAAGCTCCTTCTTAT+TGG 0.139580 8_1:+19175088 Msa1183770:five_prime_UTR
TTTGCACTTGTTTCCATAAA+AGG 0.153571 8_1:-19176808 None:intergenic
ATTCTTTACATACACTTTAA+TGG 0.166971 8_1:+19177835 Msa1183770:five_prime_UTR
ACAGGTCATGCAATCCATTT+TGG 0.184596 8_1:-19181240 None:intergenic
TAGATGAAGCTTGGGAATTT+TGG 0.196222 8_1:+19179451 Msa1183770:CDS
CTTGGTTATGGAAAAGAAAT+TGG 0.196698 8_1:+19179474 Msa1183770:CDS
TAATCCACTTGTAATGTTAT+TGG 0.204262 8_1:-19178349 None:intergenic
CAAGCAACTTTGCTCTATTA+TGG 0.206502 8_1:+19181168 Msa1183770:CDS
ATAGCAGTACGAACTATAAA+AGG 0.206942 8_1:+19178225 Msa1183770:five_prime_UTR
TGTAGAAAGTTTGAGACTTT+TGG 0.232605 8_1:+19180977 Msa1183770:CDS
AACTAGTCACAAACGTGTTT+TGG 0.242994 8_1:+19180024 Msa1183770:CDS
AAACTACCAAGGATAAAATA+TGG 0.249656 8_1:+19180746 Msa1183770:CDS
TAACATATTCAAATGGATAT+TGG 0.254312 8_1:-19180883 None:intergenic
TATGGAAAAGAAATTGGTTT+TGG 0.264632 8_1:+19179480 Msa1183770:CDS
ACTAGACTTGGAATTCTATA+AGG 0.272046 8_1:+19182037 Msa1183770:three_prime_UTR
CCCCTTAAAATCCACAAAAT+AGG 0.272771 8_1:+19178861 Msa1183770:five_prime_UTR
CCACCGTGTGGTTTGGGAAT+TGG 0.282481 8_1:+19177796 Msa1183770:five_prime_UTR
GCTAACATGTGTGTTGTTTC+AGG 0.285057 8_1:-19179729 None:intergenic
TTTCGGTCGGTCACGGGTTT+GGG 0.292524 8_1:-19178656 None:intergenic
AACATATTCAAATGGATATT+GGG 0.292770 8_1:-19180882 None:intergenic
AAAAGCCAAGAAAGTGTAAA+AGG 0.296909 8_1:-19182082 None:intergenic
GTTTCGGTCGGTCACGGGTT+TGG 0.299123 8_1:-19178657 None:intergenic
CTGCCGGGCAAGAACGATTT+AGG 0.303257 8_1:+19176337 Msa1183770:five_prime_UTR
TTCAGGCTTCAACCACTATA+GGG 0.303664 8_1:+19180148 Msa1183770:CDS
TAATGTTATTGGTGGGTAAC+AGG 0.312590 8_1:-19178338 None:intergenic
TCTCGAAGTGTTTGAAGAAT+TGG 0.315261 8_1:-19180667 None:intergenic
TTGTAACAAGTTACTAGATT+TGG 0.320182 8_1:+19181954 Msa1183770:three_prime_UTR
CTTTCTACAACTACATGATA+TGG 0.324560 8_1:-19180963 None:intergenic
TTTCAGGCTTCAACCACTAT+AGG 0.325546 8_1:+19180147 Msa1183770:CDS
CATAACCCATGTCGGGTATC+TGG 0.327459 8_1:-19180329 None:intergenic
CATAATCCACCGTGTGGTTT+GGG 0.328282 8_1:+19177790 Msa1183770:five_prime_UTR
AAGTGAAATACTTTCTAGTT+AGG 0.336680 8_1:-19177705 None:intergenic
ATGGGCATTCACCGATTCTA+AGG 0.338784 8_1:+19180765 Msa1183770:CDS
TGCTTCGTTGTCTTCTTGCT+TGG 0.341298 8_1:-19179905 None:intergenic
AGCATGAAGTATGGAGAAAT+TGG 0.343407 8_1:+19179924 Msa1183770:CDS
GCATAATCCACCGTGTGGTT+TGG 0.344796 8_1:+19177789 Msa1183770:five_prime_UTR
CCTTATGAGTATCAAACAAT+TGG 0.344873 8_1:+19181611 Msa1183770:CDS
TGATAATGTTAACAAGCTTT+TGG 0.346717 8_1:+19176568 Msa1183770:five_prime_UTR
TCGTTGTATACTAGATAGTT+TGG 0.358637 8_1:-19181143 None:intergenic
GCTTTGTTGCCATGCTTTGA+AGG 0.364177 8_1:+19181003 Msa1183770:CDS
ACGTATTATTATGAATGATT+TGG 0.371731 8_1:-19173711 None:intergenic
CCGGTGGTACACGTGGAAAC+TGG 0.371788 8_1:-19173853 None:intergenic
CACGGTGGATTATGCAATAT+TGG 0.373350 8_1:-19177781 None:intergenic
GAGCTTAAATTCAAGTTTCA+AGG 0.374113 8_1:+19180616 Msa1183770:CDS
AGACAACGAAGCATGAAGTA+TGG 0.376206 8_1:+19179915 Msa1183770:CDS
TGGTGAAATATTCATTGTTT+CGG 0.379147 8_1:-19178673 None:intergenic
CCAATTGTTTGATACTCATA+AGG 0.379297 8_1:-19181611 None:intergenic
TTGCACGAGCTGGTCCAAAA+TGG 0.380694 8_1:+19181226 Msa1183770:CDS
TTGTTTCAGGAAGTTGTAAA+AGG 0.382264 8_1:-19179716 None:intergenic
GGTGGGTTCAATCGGTTGTC+GGG 0.385630 8_1:+19178564 Msa1183770:five_prime_UTR
ATAACAAATCTTACATGAAA+AGG 0.389811 8_1:-19177742 None:intergenic
GGGTGGGTTCAATCGGTTGT+CGG 0.391072 8_1:+19178563 Msa1183770:five_prime_UTR
TTCATTGTTTCGGTCGGTCA+CGG 0.392077 8_1:-19178663 None:intergenic
CCATTTCAATCTCATGTGCT+TGG 0.392930 8_1:-19179776 None:intergenic
GTCATCGACCACCAGATAAA+AGG 0.400501 8_1:+19179577 Msa1183770:CDS
CTAGTGCTTTAGCCATTGAT+TGG 0.402321 8_1:-19180295 None:intergenic
CTCCTTCTTATTGGAGACTC+TGG 0.406221 8_1:+19175097 Msa1183770:five_prime_UTR
GGCGCCAACTATCTATGTAT+TGG 0.413014 8_1:-19178910 None:intergenic
AATTGGACGATATTAATTCC+TGG 0.415337 8_1:-19180650 None:intergenic
ATTAAAGTGTATGTAAAGAA+TGG 0.415581 8_1:-19177833 None:intergenic
AAATGTGGAAGGAGCATTCA+TGG 0.416001 8_1:+19176840 Msa1183770:five_prime_UTR
CTTCTTCTTCTCTTCTCCGT+TGG 0.416764 8_1:+19173821 Msa1183770:five_prime_UTR
TTTGTTTGAGATAACTCATA+AGG 0.419354 8_1:-19181650 None:intergenic
CAGCCATTTGATTAAAGTAA+TGG 0.423225 8_1:+19178825 Msa1183770:five_prime_UTR
AGGCAGGTTTGTTTGTAGTA+AGG 0.424346 8_1:+19179551 Msa1183770:CDS
GTTGAATTAAAGCTTTAATA+CGG 0.428306 8_1:-19173736 None:intergenic
CAGCTGTTTCATCATACAAA+AGG 0.430983 8_1:-19180193 None:intergenic
GGACCATTACTTTAATCAAA+TGG 0.433805 8_1:-19178828 None:intergenic
CAGAATGGGATTAAACATCT+TGG 0.434563 8_1:+19180368 Msa1183770:CDS
TCAAACAATTGGGAACAGTT+TGG 0.438087 8_1:+19181622 Msa1183770:CDS
CCTCCAACAGTGCAGATTAG+AGG 0.441575 8_1:+19177647 Msa1183770:five_prime_UTR
GTACACGTGGAAACTGGAAT+TGG 0.441991 8_1:-19173847 None:intergenic
CTTGAAGGTTCTTCTCAGTA+GGG 0.446044 8_1:+19178479 Msa1183770:five_prime_UTR
GCTGGAGGAAGAACTAATCT+TGG 0.447252 8_1:+19179852 Msa1183770:CDS
CCTCTAATCTGCACTGTTGG+AGG 0.450000 8_1:-19177647 None:intergenic
TATGAGTTATCTCAAACAAA+TGG 0.450597 8_1:+19181653 Msa1183770:CDS
TAATACACCCACTGTTGGTA+TGG 0.451893 8_1:+19179416 Msa1183770:CDS
GAAATCAATGTATGCTATCA+AGG 0.453189 8_1:+19180526 Msa1183770:CDS
TCTTGAAGGTTCTTCTCAGT+AGG 0.453540 8_1:+19178478 Msa1183770:five_prime_UTR
CGTTGTATACTAGATAGTTT+GGG 0.455565 8_1:-19181142 None:intergenic
CTCGATGACGGTGTTTCAGT+TGG 0.458018 8_1:-19181442 None:intergenic
TTGACAGTGTAGATGAAGCT+TGG 0.458332 8_1:+19179442 Msa1183770:CDS
AAGCAATGTTTGAAGAAGCT+TGG 0.459679 8_1:+19180459 Msa1183770:CDS
CATGGCACTTAATGCAGAAT+GGG 0.463952 8_1:+19180354 Msa1183770:CDS
CTTATTGGAGACTCTGGTGT+TGG 0.464289 8_1:+19175103 Msa1183770:five_prime_UTR
TGAATAATAACGAAGGTTAA+CGG 0.464933 8_1:-19178414 None:intergenic
TTGACAGTACACTCTCTTGA+AGG 0.468140 8_1:+19178464 Msa1183770:five_prime_UTR
TGATATGCATGGTAAAATGA+AGG 0.468657 8_1:-19179987 None:intergenic
GAAAAGTCATTCATGCTAAG+AGG 0.469830 8_1:-19181831 None:intergenic
AACTACCAAGGATAAAATAT+GGG 0.470849 8_1:+19180747 Msa1183770:CDS
TAATGAGCACCTATCCTTGA+TGG 0.471028 8_1:-19176875 None:intergenic
TGACAGTGTAGATGAAGCTT+GGG 0.472271 8_1:+19179443 Msa1183770:CDS
TCATTGTTTCGGTCGGTCAC+GGG 0.474102 8_1:-19178662 None:intergenic
TTCGTTGTCTTCTTGCTTGG+AGG 0.474723 8_1:-19179902 None:intergenic
TTCTTGTAGTGGGACACTGC+CGG 0.479251 8_1:+19176321 Msa1183770:intron
TCCACTTGTAATGTTATTGG+TGG 0.482149 8_1:-19178346 None:intergenic
AGAGAGTTGTTGCGGAGAAA+AGG 0.483012 8_1:+19180687 Msa1183770:CDS
CTTTCCAATACATAGATAGT+TGG 0.484433 8_1:+19178906 Msa1183770:five_prime_UTR
CCAGTTCTTGTGTCAGACCT+AGG 0.485373 8_1:-19179618 None:intergenic
TAACAAATCTTACATGAAAA+GGG 0.486430 8_1:-19177741 None:intergenic
TTAAAGTGTATGTAAAGAAT+GGG 0.487470 8_1:-19177832 None:intergenic
AGCTACTATCGTGGGGCACA+TGG 0.488301 8_1:+19176372 Msa1183770:five_prime_UTR
TTTCGAAGATTTGCACGAGC+TGG 0.489570 8_1:+19181216 Msa1183770:CDS
CTTATGAGTATCAAACAATT+GGG 0.489925 8_1:+19181612 Msa1183770:CDS
ATCCTTGATGGCAGCAGCCA+TGG 0.490402 8_1:-19176863 None:intergenic
TATTGCATAATTTATTGTGA+TGG 0.491182 8_1:-19178175 None:intergenic
CAGGAATTTGCAGATCAAAT+CGG 0.492691 8_1:+19176781 Msa1183770:intron
ATTGCACTTAGTGTAAAGAA+TGG 0.494771 8_1:+19179654 Msa1183770:CDS
TTCGAACTGTTGAGCAGGAT+GGG 0.495201 8_1:+19176183 Msa1183770:five_prime_UTR
TCTCGGTTCTTAAATCCCCT+TGG 0.497175 8_1:-19181355 None:intergenic
CCAAGCACATGAGATTGAAA+TGG 0.497661 8_1:+19179776 Msa1183770:CDS
AAAATAAATCAAACTCATGA+TGG 0.499052 8_1:-19180829 None:intergenic
TTTGTTATGTCACTAAATAG+TGG 0.500054 8_1:+19177757 Msa1183770:five_prime_UTR
AAGCTTGTTAACATTATCAC+TGG 0.500079 8_1:-19176564 None:intergenic
TGTCCTCTAATCTGCACTGT+TGG 0.502752 8_1:-19177650 None:intergenic
TGGAGGCCTTGCATTGTTTG+CGG 0.503248 8_1:-19177630 None:intergenic
AAAGCAATAACATATTCAAA+TGG 0.506576 8_1:-19180890 None:intergenic
AAGTATTGTCACATCAAAAG+TGG 0.507196 8_1:+19178747 Msa1183770:five_prime_UTR
GAAATATCCTATAAATAAAG+AGG 0.507442 8_1:+19178279 Msa1183770:five_prime_UTR
GGCCTTGCATTGTTTGCGGA+TGG 0.508567 8_1:-19177626 None:intergenic
TACACGTGGAAACTGGAATT+GGG 0.508797 8_1:-19173846 None:intergenic
GGCCATGGCTGCTGCCATCA+AGG 0.509743 8_1:+19176861 Msa1183770:five_prime_UTR
TCTTGTAGTGGGACACTGCC+GGG 0.511489 8_1:+19176322 Msa1183770:intron
TTGCACTTAGTGTAAAGAAT+GGG 0.512175 8_1:+19179655 Msa1183770:CDS
GGAGGAAGAGTGATCGGATC+CGG 0.513337 8_1:-19173872 None:intergenic
CAGGTTTGTTTGTAGTAAGG+AGG 0.514119 8_1:+19179554 Msa1183770:CDS
AGTGAAGAAACGTGATTGAA+TGG 0.514696 8_1:-19178931 None:intergenic
TTGCATTGTTTGCGGATGGT+TGG 0.514800 8_1:-19177622 None:intergenic
AAATGACTGTGCCCCTATAG+TGG 0.515233 8_1:-19180160 None:intergenic
GGACTGCGGAACATCTCGTT+TGG 0.515297 8_1:+19181583 Msa1183770:CDS
CCTAGGTCTGACACAAGAAC+TGG 0.515501 8_1:+19179618 Msa1183770:CDS
ATGATGCGGGTGGGTTCAAT+CGG 0.517243 8_1:+19178556 Msa1183770:five_prime_UTR
ACTATCTATGTATTGGAAAG+TGG 0.518185 8_1:-19178903 None:intergenic
CAATGGTCGATTAGCACGAT+TGG 0.519196 8_1:-19180117 None:intergenic
TTACAGCAAATCTTAGAAGA+AGG 0.520470 8_1:-19175135 None:intergenic
TGATCAGTGAACAAAGTTCG+TGG 0.522394 8_1:-19180269 None:intergenic
ATGTATACATGAAGTTCGTA+TGG 0.523531 8_1:-19178039 None:intergenic
CCACAAAATAGGCTAATGAA+AGG 0.523779 8_1:+19178872 Msa1183770:five_prime_UTR
CATATTCAGTTAAGAACCCT+AGG 0.523840 8_1:+19179601 Msa1183770:CDS
ATTCGAACTGTTGAGCAGGA+TGG 0.524930 8_1:+19176182 Msa1183770:five_prime_UTR
CGCAATCCATTTGATATGCA+TGG 0.526801 8_1:-19179998 None:intergenic
GAAAATTCGAACTGTTGAGC+AGG 0.528077 8_1:+19176178 Msa1183770:intron
TTTCAGGAAGTTGTAAAAGG+TGG 0.528337 8_1:-19179713 None:intergenic
CCATGTGCATAACCCATGTC+GGG 0.529846 8_1:-19180336 None:intergenic
CCAGTTTCCACGTGTACCAC+CGG 0.530828 8_1:+19173853 Msa1183770:five_prime_UTR
CCCACCAATAACATTACAAG+TGG 0.532297 8_1:+19178345 Msa1183770:five_prime_UTR
TTGTAACAAGTTACTAGACT+TGG 0.532950 8_1:+19182025 Msa1183770:three_prime_UTR
AAAGTCAATGCTCATGATGA+AGG 0.533218 8_1:+19181295 Msa1183770:CDS
AGGGGATTTAAGAACCGAGA+TGG 0.534590 8_1:+19181358 Msa1183770:CDS
AGAACCGAGATGGGTTATCA+AGG 0.535529 8_1:+19181368 Msa1183770:CDS
TGACCTGTGTAATAAAGTAA+AGG 0.535851 8_1:+19181255 Msa1183770:CDS
ATTATTGAAGCTCTCTTCAT+CGG 0.536063 8_1:-19176507 None:intergenic
TGGAGAAATTGGTTGTCTCA+TGG 0.536840 8_1:+19179935 Msa1183770:CDS
CACAAAATAGGCTAATGAAA+GGG 0.537049 8_1:+19178873 Msa1183770:five_prime_UTR
CATGATATGGAGGACTGTAC+AGG 0.538041 8_1:-19180950 None:intergenic
ATTGAAATGGCAGAAGACTC+CGG 0.539084 8_1:+19179789 Msa1183770:CDS
TCTGCGAGTTGCCTTAGAAT+CGG 0.539264 8_1:-19180776 None:intergenic
GTTGAGTACTTCGCATGCCA+AGG 0.539975 8_1:-19180586 None:intergenic
CAGTTCTTGTGTCAGACCTA+GGG 0.540746 8_1:-19179617 None:intergenic
GATAGCTACATAAGCACCAT+TGG 0.541145 8_1:+19176055 Msa1183770:five_prime_UTR
TTAACACAAGTACTATACTT+AGG 0.541410 8_1:-19177867 None:intergenic
AAACAGCTGAGTCATTCAAA+TGG 0.542404 8_1:+19180207 Msa1183770:CDS
CACCAGAGTCTCCAATAAGA+AGG 0.544091 8_1:-19175099 None:intergenic
AAAGACGGCTCAATTAGATC+AGG 0.545158 8_1:+19179531 Msa1183770:CDS
AACAGGATAAACAGTAGGTA+AGG 0.545457 8_1:-19178321 None:intergenic
AACCATCCGCAAACAATGCA+AGG 0.546517 8_1:+19177624 Msa1183770:five_prime_UTR
ATCAATAATACACCCACTGT+TGG 0.547755 8_1:+19179411 Msa1183770:CDS
TTCAAGGCATGCATGAAACC+AGG 0.547826 8_1:+19180632 Msa1183770:CDS
TGGCTGCTGCCATCAAGGAT+AGG 0.548752 8_1:+19176866 Msa1183770:five_prime_UTR
ACATGGCACTTAATGCAGAA+TGG 0.548883 8_1:+19180353 Msa1183770:CDS
TAGCAGTACGAACTATAAAA+GGG 0.549651 8_1:+19178226 Msa1183770:five_prime_UTR
CAACGGAGAAGAGAAGAAGA+AGG 0.550308 8_1:-19173820 None:intergenic
CAATCGTGCTAATCGACCAT+TGG 0.551184 8_1:+19180118 Msa1183770:CDS
TGTCCTAAATCGTTCTTGCC+CGG 0.552890 8_1:-19176340 None:intergenic
GTCAAATTCCATACCAACAG+TGG 0.555022 8_1:-19179424 None:intergenic
AGCTGTTTCATCATACAAAA+GGG 0.555972 8_1:-19180192 None:intergenic
TTGTCGGTGTGGAAGGAGGT+TGG 0.558659 8_1:+19180912 Msa1183770:CDS
ATGAAGGAAGCATTCACCCT+TGG 0.559361 8_1:+19180569 Msa1183770:CDS
CAGCTTATGAGTGCACATGC+TGG 0.559542 8_1:+19179834 Msa1183770:CDS
GCCATGTGCATAACCCATGT+CGG 0.559638 8_1:-19180337 None:intergenic
CCCGACATGGGTTATGCACA+TGG 0.560013 8_1:+19180336 Msa1183770:CDS
GTCATCGAGTCAAAGATCTC+AGG 0.560513 8_1:+19181456 Msa1183770:CDS
GAAATATTCATTGTTTCGGT+CGG 0.562856 8_1:-19178669 None:intergenic
AGGTTTGTTTGTAGTAAGGA+GGG 0.563063 8_1:+19179555 Msa1183770:CDS
TAATCTTGGATATACACCAT+TGG 0.563353 8_1:+19179866 Msa1183770:CDS
GGGGATTTAAGAACCGAGAT+GGG 0.564163 8_1:+19181359 Msa1183770:CDS
ATGGGTTATCAAGGCGTAGG+AGG 0.565085 8_1:+19181377 Msa1183770:CDS
TGTTGCATCTATAAGTCAGA+TGG 0.565458 8_1:+19181562 Msa1183770:CDS
CCTCCTTTACTTTATTACAC+AGG 0.567270 8_1:-19181258 None:intergenic
TGCATAGTCATAAGATTGCA+TGG 0.568012 8_1:-19178119 None:intergenic
AAGTGTGGAGGAAGAGTGAT+CGG 0.569806 8_1:-19173878 None:intergenic
CTGAAAATGTTACTCAACCA+AGG 0.571414 8_1:+19181338 Msa1183770:CDS
GAGTCACATAATCAGAATGA+AGG 0.573396 8_1:+19181790 Msa1183770:CDS
CCGAAAATCTATGATGCGGG+TGG 0.573871 8_1:+19178546 Msa1183770:five_prime_UTR
TAACCAGTAGCTACTATCGT+GGG 0.574293 8_1:+19176364 Msa1183770:five_prime_UTR
TCAGGCTTCAACCACTATAG+GGG 0.576261 8_1:+19180149 Msa1183770:CDS
GAACCGAAAATCTATGATGC+GGG 0.580438 8_1:+19178543 Msa1183770:five_prime_UTR
TTGATGTTCATGACAAGAAG+TGG 0.581093 8_1:+19180501 Msa1183770:CDS
CACTGATCAAGACCAATCAA+TGG 0.582222 8_1:+19180283 Msa1183770:CDS
TTGAAGGTTCTTCTCAGTAG+GGG 0.583369 8_1:+19178480 Msa1183770:five_prime_UTR
ACGGCTCAATTAGATCAGGC+AGG 0.583390 8_1:+19179535 Msa1183770:CDS
TACGCCTTGATAACCCATCT+CGG 0.588651 8_1:-19181372 None:intergenic
TTGAGTACTTCGCATGCCAA+GGG 0.593372 8_1:-19180585 None:intergenic
CAACCGTCGTAGAACGAATG+AGG 0.595646 8_1:-19179015 None:intergenic
TGCAAAGGATGCTACAAATG+TGG 0.595953 8_1:+19176825 Msa1183770:five_prime_UTR
TAACTAGAAAGTATTTCACT+TGG 0.598822 8_1:+19177707 Msa1183770:five_prime_UTR
GTTGAATTGAATAATAACGA+AGG 0.599004 8_1:-19178421 None:intergenic
TGACAAGTAAATAAATAACA+AGG 0.599391 8_1:+19178001 Msa1183770:five_prime_UTR
CCACTTGTAATGTTATTGGT+GGG 0.600181 8_1:-19178345 None:intergenic
AGCTCGTGCAAATCTTCGAA+AGG 0.601004 8_1:-19181214 None:intergenic
AGTATTGTCACATCAAAAGT+GGG 0.601512 8_1:+19178748 Msa1183770:five_prime_UTR
TTCAGGATTCATGACGGAGA+AGG 0.601819 8_1:-19173903 None:intergenic
TGGGTTATCAAGGCGTAGGA+GGG 0.602501 8_1:+19181378 Msa1183770:CDS
ACACTTCGAGAGAGTTGTTG+CGG 0.602608 8_1:+19180679 Msa1183770:CDS
CCTGTGTAATAAAGTAAAGG+AGG 0.604303 8_1:+19181258 Msa1183770:CDS
TGGGTAACAGGATAAACAGT+AGG 0.604881 8_1:-19178326 None:intergenic
AGGTAGTTTCTAGCATCCAA+TGG 0.607272 8_1:-19179882 None:intergenic
AAACTGGAATTGGGCACCAA+CGG 0.608236 8_1:-19173837 None:intergenic
ACGGAGAAGGTGAAGTGTGG+AGG 0.609394 8_1:-19173890 None:intergenic
ATCGGATCCGGTGGTACACG+TGG 0.609682 8_1:-19173860 None:intergenic
ATGGGCAGCATGTTACATGA+AGG 0.611169 8_1:+19180553 Msa1183770:CDS
AAGGATGCTACAAATGTGGA+AGG 0.613051 8_1:+19176829 Msa1183770:five_prime_UTR
CGAAAATCTATGATGCGGGT+GGG 0.613350 8_1:+19178547 Msa1183770:five_prime_UTR
AAGCCTGAAAACAATGCCAA+TGG 0.613717 8_1:-19180134 None:intergenic
CATGGCACGAATACATGAAG+TGG 0.614909 8_1:-19178101 None:intergenic
GAGATGGGTTATCAAGGCGT+AGG 0.619138 8_1:+19181374 Msa1183770:CDS
AGGCATAATAATATTAAATG+TGG 0.622328 8_1:-19178693 None:intergenic
TGAAAATGTTACTCAACCAA+GGG 0.623867 8_1:+19181339 Msa1183770:CDS
ACTCACAAAATCAACTCCAA+TGG 0.624945 8_1:-19176071 None:intergenic
GGAAGGAGCATTCATGGCCA+TGG 0.628916 8_1:+19176846 Msa1183770:five_prime_UTR
TTTGTGATCACAGAGTTCAA+AGG 0.631891 8_1:+19179681 Msa1183770:CDS
TGAGATCTTTGACTCGATGA+CGG 0.635185 8_1:-19181454 None:intergenic
TAGTATTAGATATGAAACAC+AGG 0.635468 8_1:-19178713 None:intergenic
ATAACCAGTAGCTACTATCG+TGG 0.642124 8_1:+19176363 Msa1183770:five_prime_UTR
CTTATGAGTGCACATGCTGG+AGG 0.644813 8_1:+19179837 Msa1183770:CDS
GATTCTAAGGCAACTCGCAG+AGG 0.647498 8_1:+19180778 Msa1183770:CDS
ATGACGGAGAAGGTGAAGTG+TGG 0.648130 8_1:-19173893 None:intergenic
GTGATGCCAGATACCCGACA+TGG 0.650609 8_1:+19180323 Msa1183770:CDS
TACTTTAACAGAAAGAAAGA+CGG 0.652471 8_1:+19179516 Msa1183770:CDS
GCTTCAATAATGTGAAGCAG+TGG 0.652698 8_1:+19176519 Msa1183770:five_prime_UTR
TGATGTTCATGACAAGAAGT+GGG 0.654468 8_1:+19180502 Msa1183770:CDS
AAGTGAATTTGAATCTGACG+TGG 0.654711 8_1:-19178378 None:intergenic
GACAAGTAAATAAATAACAA+GGG 0.655812 8_1:+19178002 Msa1183770:five_prime_UTR
GGAAGAGTGATCGGATCCGG+TGG 0.657938 8_1:-19173869 None:intergenic
TCTACAACTACATGATATGG+AGG 0.659217 8_1:-19180960 None:intergenic
AAACCAATTCCCAAACCACA+CGG 0.659429 8_1:-19177799 None:intergenic
CGAACCGAAAATCTATGATG+CGG 0.660783 8_1:+19178542 Msa1183770:five_prime_UTR
CAGATTAGAGGACAACCAGT+TGG 0.660940 8_1:+19177659 Msa1183770:five_prime_UTR
AATGGCTAAAGCACTAGCTG+AGG 0.665030 8_1:+19180301 Msa1183770:CDS
TCAAATTCCATACCAACAGT+GGG 0.666580 8_1:-19179423 None:intergenic
GAACCTCATTCGTTCTACGA+CGG 0.681378 8_1:+19179012 Msa1183770:five_prime_UTR
TGATGCCAGATACCCGACAT+GGG 0.681768 8_1:+19180324 Msa1183770:CDS
AGTCAAGACATAAACTACCA+AGG 0.690036 8_1:+19180735 Msa1183770:CDS
AACCAGTAGCTACTATCGTG+GGG 0.702592 8_1:+19176365 Msa1183770:five_prime_UTR
TAACATTATCACTGGCATAG+CGG 0.705715 8_1:-19176556 None:intergenic
GAAAATGTTACTCAACCAAG+GGG 0.708124 8_1:+19181340 Msa1183770:CDS
CCAATTCCCAAACCACACGG+TGG 0.708851 8_1:-19177796 None:intergenic
TCTATAAGTCAGATGGACTG+CGG 0.720088 8_1:+19181569 Msa1183770:CDS
ATACTATTCAGGATTCATGA+CGG 0.723714 8_1:-19173909 None:intergenic
ATATTGCATAATCCACCGTG+TGG 0.726238 8_1:+19177784 Msa1183770:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGTTGTTTTTTTAATTT+GGG + chr8_1:19174057-19174076 Msa1183770:intron 10.0%
!!! ATGTAAAAATGTTTTTTTAA+TGG + chr8_1:19174519-19174538 Msa1183770:intron 10.0%
!! ATGTTAAAATTAAATTGAAA+AGG + chr8_1:19174557-19174576 Msa1183770:intron 10.0%
!! AAAGTAGAAAAAAAAGAAAA+AGG - chr8_1:19173938-19173957 None:intergenic 15.0%
!!! TTTTGTTCTTGTTTTTTAAA+AGG + chr8_1:19174006-19174025 Msa1183770:intron 15.0%
!!! TTTGTTCTTGTTTTTTAAAA+GGG + chr8_1:19174007-19174026 Msa1183770:intron 15.0%
!!! GAATTGTTGTTTTTTTAATT+TGG + chr8_1:19174056-19174075 Msa1183770:intron 15.0%
!!! ATTGTTGTTTTTTTAATTTG+GGG + chr8_1:19174058-19174077 Msa1183770:intron 15.0%
!!! ATTTTATGTTTTTCAAAACA+TGG + chr8_1:19174315-19174334 Msa1183770:intron 15.0%
!! AAAATAAAATACTGCAATAT+AGG - chr8_1:19175182-19175201 None:intergenic 15.0%
!! AAATAAATAACCAGTATAAA+AGG - chr8_1:19175266-19175285 None:intergenic 15.0%
!! ACAAACAAAAAAATCAAAAA+AGG - chr8_1:19179096-19179115 None:intergenic 15.0%
!! ACAAAAAATAGAGTAAAATA+TGG - chr8_1:19179254-19179273 None:intergenic 15.0%
!!! TTATTTTACTTTATTAATGC+AGG + chr8_1:19181768-19181787 Msa1183770:intron 15.0%
!! ACGTATTATTATGAATGATT+TGG - chr8_1:19173714-19173733 None:intergenic 20.0%
!!! GTTGAATTAAAGCTTTAATA+CGG - chr8_1:19173739-19173758 None:intergenic 20.0%
!!! GTTTTGAATTAAAATTTGTG+TGG - chr8_1:19173772-19173791 None:intergenic 20.0%
!!! TTTTTAATTTGGGGTTAATT+TGG + chr8_1:19174067-19174086 Msa1183770:intron 20.0%
!! ACAACAACAAAAATCATAAA+AGG - chr8_1:19174148-19174167 None:intergenic 20.0%
!!! TTTTGTTGTTGTTTTTCAAA+AGG + chr8_1:19174156-19174175 Msa1183770:intron 20.0%
!!! TTTGTTGTTGTTTTTCAAAA+GGG + chr8_1:19174157-19174176 Msa1183770:intron 20.0%
!! ATGGTTTGAATTATTTCAAT+TGG + chr8_1:19174618-19174637 Msa1183770:intron 20.0%
!! TAAGACTACTGTTTAAAAAT+TGG + chr8_1:19174706-19174725 Msa1183770:intron 20.0%
!! CAGAATAATCAAATCTATAA+TGG + chr8_1:19175491-19175510 Msa1183770:intron 20.0%
!! AATAATCAAATCTATAATGG+AGG + chr8_1:19175494-19175513 Msa1183770:intron 20.0%
!!! ATAATCAAATCTATAATGGA+GGG + chr8_1:19175495-19175514 Msa1183770:intron 20.0%
!!! AACTATCAAATCTATTTTGT+AGG + chr8_1:19175518-19175537 Msa1183770:intron 20.0%
!! GTTGAATTAAATCTATGAAT+GGG + chr8_1:19175643-19175662 Msa1183770:intron 20.0%
!! TTAACTTTATGATATACTAC+AGG + chr8_1:19176018-19176037 Msa1183770:intron 20.0%
!! AAAACATAGTAGTGTATATT+AGG - chr8_1:19176295-19176314 None:intergenic 20.0%
!! ATCAGCTATTCAATAATAAA+CGG - chr8_1:19176904-19176923 None:intergenic 20.0%
!!! GAAATGTACTATGATTTTTT+TGG + chr8_1:19177317-19177336 Msa1183770:intron 20.0%
!!! TACTATGATTTTTTTGGATT+TGG + chr8_1:19177323-19177342 Msa1183770:intron 20.0%
!!! TTAGATTTCAATGCATATTT+TGG + chr8_1:19177420-19177439 Msa1183770:intron 20.0%
!!! TTTTGTTTAAAACTGACATA+CGG + chr8_1:19177443-19177462 Msa1183770:intron 20.0%
!! TAACAAATCTTACATGAAAA+GGG - chr8_1:19177744-19177763 None:intergenic 20.0%
!! ATAACAAATCTTACATGAAA+AGG - chr8_1:19177745-19177764 None:intergenic 20.0%
!! TTAAAGTGTATGTAAAGAAT+GGG - chr8_1:19177835-19177854 None:intergenic 20.0%
!! ATTAAAGTGTATGTAAAGAA+TGG - chr8_1:19177836-19177855 None:intergenic 20.0%
!! ATTCTTTACATACACTTTAA+TGG + chr8_1:19177835-19177854 Msa1183770:five_prime_UTR 20.0%
!! TGACAAGTAAATAAATAACA+AGG + chr8_1:19178001-19178020 Msa1183770:five_prime_UTR 20.0%
!! GACAAGTAAATAAATAACAA+GGG + chr8_1:19178002-19178021 Msa1183770:five_prime_UTR 20.0%
!! TATTGCATAATTTATTGTGA+TGG - chr8_1:19178178-19178197 None:intergenic 20.0%
!!! TACTGCTATAATTTTTATGA+TGG - chr8_1:19178214-19178233 None:intergenic 20.0%
!! GAAATATCCTATAAATAAAG+AGG + chr8_1:19178279-19178298 Msa1183770:five_prime_UTR 20.0%
!! AGGCATAATAATATTAAATG+TGG - chr8_1:19178696-19178715 None:intergenic 20.0%
!! AACAAAAAAATCAAAAAAGG+AGG - chr8_1:19179093-19179112 None:intergenic 20.0%
!!! TTTTTTTGTTTGTGTATACA+TGG + chr8_1:19179103-19179122 Msa1183770:intron 20.0%
!! AATAGAGTAAAATATGGAAA+TGG - chr8_1:19179248-19179267 None:intergenic 20.0%
!! CAAGTATAAATTAGTGATAA+TGG - chr8_1:19179363-19179382 None:intergenic 20.0%
!! AAAATAAATCAAACTCATGA+TGG - chr8_1:19180832-19180851 None:intergenic 20.0%
!! AACATATTCAAATGGATATT+GGG - chr8_1:19180885-19180904 None:intergenic 20.0%
!! TAACATATTCAAATGGATAT+TGG - chr8_1:19180886-19180905 None:intergenic 20.0%
!! AAAGCAATAACATATTCAAA+TGG - chr8_1:19180893-19180912 None:intergenic 20.0%
!!! TTTTCAAAATGTATTGATCA+GGG - chr8_1:19181057-19181076 None:intergenic 20.0%
!!! TGGTATTATCTTTGATTTTA+GGG + chr8_1:19181099-19181118 Msa1183770:CDS 20.0%
!! GTTAACACATAATAAATACA+AGG - chr8_1:19181522-19181541 None:intergenic 20.0%
!!! TAGTTTTACTAGATTATTGA+TGG + chr8_1:19181685-19181704 Msa1183770:CDS 20.0%
! TTTCAATTGGAATTTCATCA+CGG + chr8_1:19174631-19174650 Msa1183770:intron 25.0%
! CAAAACTATGATAGTACTAT+TGG + chr8_1:19174661-19174680 Msa1183770:intron 25.0%
! AAGTGATTGTGTTTGATATT+TGG + chr8_1:19174980-19174999 Msa1183770:intron 25.0%
! AGTTTATCTCTATAGAGAAA+CGG + chr8_1:19175029-19175048 Msa1183770:intron 25.0%
! AAATAACCAGTATAAAAGGA+TGG - chr8_1:19175262-19175281 None:intergenic 25.0%
! ACATAACAACAAAATCAATG+GGG - chr8_1:19175317-19175336 None:intergenic 25.0%
! GACATAACAACAAAATCAAT+GGG - chr8_1:19175318-19175337 None:intergenic 25.0%
! AGACATAACAACAAAATCAA+TGG - chr8_1:19175319-19175338 None:intergenic 25.0%
! TTAACATTGAATGAGTGTAA+TGG + chr8_1:19175345-19175364 Msa1183770:intron 25.0%
! TAACATTGAATGAGTGTAAT+GGG + chr8_1:19175346-19175365 Msa1183770:intron 25.0%
! GGTTGAATTAAATCTATGAA+TGG + chr8_1:19175642-19175661 Msa1183770:intron 25.0%
!! AAATCTATGAATGGGATTTT+TGG + chr8_1:19175651-19175670 Msa1183770:intron 25.0%
! TTTGCTAAATCATAAACTCA+AGG - chr8_1:19175866-19175885 None:intergenic 25.0%
! ATGATATTATAAGTTCAGAC+TGG - chr8_1:19176145-19176164 None:intergenic 25.0%
! AGATTGTATGTATCTTAGAT+TGG + chr8_1:19176222-19176241 Msa1183770:intron 25.0%
! CATGTTTAAACTCTTTATTG+TGG - chr8_1:19176421-19176440 None:intergenic 25.0%
! CACAATAAAGAGTTTAAACA+TGG + chr8_1:19176419-19176438 Msa1183770:intron 25.0%
!!! TGATAATGTTAACAAGCTTT+TGG + chr8_1:19176568-19176587 Msa1183770:five_prime_UTR 25.0%
! TCAGCTATTCAATAATAAAC+GGG - chr8_1:19176903-19176922 None:intergenic 25.0%
!!! TATTCTTTCTGGAAGTTTTA+AGG - chr8_1:19176986-19177005 None:intergenic 25.0%
! TAAAGTTTGGTTATTCTTTC+TGG - chr8_1:19176997-19177016 None:intergenic 25.0%
! TAACAATGTCAAGTAAAGTT+TGG - chr8_1:19177010-19177029 None:intergenic 25.0%
!! TATTGTGAACTGATTCATAA+TGG + chr8_1:19177247-19177266 Msa1183770:intron 25.0%
!!! AAACTTTTAAAATCAAGCTC+AGG - chr8_1:19177282-19177301 None:intergenic 25.0%
!! TTTGTTTAAAACTGACATAC+GGG + chr8_1:19177444-19177463 Msa1183770:intron 25.0%
! ATTCATGATGAAGTTAAACA+AGG - chr8_1:19177589-19177608 None:intergenic 25.0%
!!! AAGTGAAATACTTTCTAGTT+AGG - chr8_1:19177708-19177727 None:intergenic 25.0%
!!! TAACTAGAAAGTATTTCACT+TGG + chr8_1:19177707-19177726 Msa1183770:five_prime_UTR 25.0%
!! TTTGTTATGTCACTAAATAG+TGG + chr8_1:19177757-19177776 Msa1183770:five_prime_UTR 25.0%
! TTAACACAAGTACTATACTT+AGG - chr8_1:19177870-19177889 None:intergenic 25.0%
!!! GTTTTCTCCTCTTTATTTAT+AGG - chr8_1:19178289-19178308 None:intergenic 25.0%
! TAATCCACTTGTAATGTTAT+TGG - chr8_1:19178352-19178371 None:intergenic 25.0%
! TGAATAATAACGAAGGTTAA+CGG - chr8_1:19178417-19178436 None:intergenic 25.0%
! GTTGAATTGAATAATAACGA+AGG - chr8_1:19178424-19178443 None:intergenic 25.0%
! TAGTATTAGATATGAAACAC+AGG - chr8_1:19178716-19178735 None:intergenic 25.0%
!!! AAACAGTGTTACTTATGTTT+TGG + chr8_1:19179315-19179334 Msa1183770:intron 25.0%
!!! TATGGAAAAGAAATTGGTTT+TGG + chr8_1:19179480-19179499 Msa1183770:CDS 25.0%
! TACTTTAACAGAAAGAAAGA+CGG + chr8_1:19179516-19179535 Msa1183770:CDS 25.0%
!! GTATTTTCAAACTCAATCAT+TGG + chr8_1:19179959-19179978 Msa1183770:CDS 25.0%
!! ATTTTACCATGCATATCAAA+TGG + chr8_1:19179992-19180011 Msa1183770:CDS 25.0%
!! ATCTTAGACTATGGTTATTT+TGG + chr8_1:19180062-19180081 Msa1183770:CDS 25.0%
! AAACTACCAAGGATAAAATA+TGG + chr8_1:19180746-19180765 Msa1183770:CDS 25.0%
! AACTACCAAGGATAAAATAT+GGG + chr8_1:19180747-19180766 Msa1183770:CDS 25.0%
!!! GAATATGTTATTGCTTTTGT+CGG + chr8_1:19180896-19180915 Msa1183770:CDS 25.0%
!!! CTTTTCAAAATGTATTGATC+AGG - chr8_1:19181058-19181077 None:intergenic 25.0%
!!! CTGATCAATACATTTTGAAA+AGG + chr8_1:19181056-19181075 Msa1183770:CDS 25.0%
!!! ATCAATACATTTTGAAAAGG+TGG + chr8_1:19181059-19181078 Msa1183770:CDS 25.0%
!!! GTGGTATTATCTTTGATTTT+AGG + chr8_1:19181098-19181117 Msa1183770:CDS 25.0%
!!! GGTATTATCTTTGATTTTAG+GGG + chr8_1:19181100-19181119 Msa1183770:CDS 25.0%
! ACACATAATAAATACAAGGA+AGG - chr8_1:19181518-19181537 None:intergenic 25.0%
!!! TAACTTTTGATGATCATTGA+AGG + chr8_1:19181538-19181557 Msa1183770:intron 25.0%
! CTTATGAGTATCAAACAATT+GGG + chr8_1:19181612-19181631 Msa1183770:CDS 25.0%
!! TTTGTTTGAGATAACTCATA+AGG - chr8_1:19181653-19181672 None:intergenic 25.0%
! TATGAGTTATCTCAAACAAA+TGG + chr8_1:19181653-19181672 Msa1183770:CDS 25.0%
! TTGTAACAAGTTACTAGATT+TGG + chr8_1:19181954-19181973 Msa1183770:three_prime_UTR 25.0%
ATACTATTCAGGATTCATGA+CGG - chr8_1:19173912-19173931 None:intergenic 30.0%
! GAAAAAGGTACATACTATTC+AGG - chr8_1:19173923-19173942 None:intergenic 30.0%
!!! TGTTTTTTACAACCCTAGAT+TGG + chr8_1:19174252-19174271 Msa1183770:intron 30.0%
ACCTTGATATTGTGTCTAAT+TGG + chr8_1:19174397-19174416 Msa1183770:intron 30.0%
ACCAATTAGACACAATATCA+AGG - chr8_1:19174401-19174420 None:intergenic 30.0%
TTGCATGATACAAACCTTAA+TGG + chr8_1:19174591-19174610 Msa1183770:intron 30.0%
TACAAACCTTAATGGAATCA+TGG + chr8_1:19174599-19174618 Msa1183770:intron 30.0%
TTCAAACCATGATTCCATTA+AGG - chr8_1:19174608-19174627 None:intergenic 30.0%
GACTACTGTTTAAAAATTGG+TGG + chr8_1:19174709-19174728 Msa1183770:intron 30.0%
TTACAGCAAATCTTAGAAGA+AGG - chr8_1:19175138-19175157 None:intergenic 30.0%
TATAAAAGGATGGAGAAACA+TGG - chr8_1:19175252-19175271 None:intergenic 30.0%
AACATTGAATGAGTGTAATG+GGG + chr8_1:19175347-19175366 Msa1183770:intron 30.0%
GTTAAATGTGAACGAAGAAA+AGG + chr8_1:19175406-19175425 Msa1183770:intron 30.0%
AATAGAATCTACAGGTTGTA+AGG + chr8_1:19175559-19175578 Msa1183770:intron 30.0%
CAAGACATAGAAGATGATAA+TGG - chr8_1:19175740-19175759 None:intergenic 30.0%
TGATATTTCCTCAAGATCTA+TGG - chr8_1:19175801-19175820 None:intergenic 30.0%
ATAGATCTTGAGGAAATATC+AGG + chr8_1:19175800-19175819 Msa1183770:intron 30.0%
TTTAGCAAAATCGTCTTATC+TGG + chr8_1:19175877-19175896 Msa1183770:intron 30.0%
! TATTTTGTGCTGTGTATTTC+TGG + chr8_1:19175923-19175942 Msa1183770:intron 30.0%
! TGATTTTGCTTGAACTCATT+TGG + chr8_1:19176109-19176128 Msa1183770:intron 30.0%
! TTTTGATCTGTTCTTGTAGT+GGG + chr8_1:19176311-19176330 Msa1183770:intron 30.0%
TAGAGAATGAAAAACACAAC+CGG - chr8_1:19176451-19176470 None:intergenic 30.0%
ATTATTGAAGCTCTCTTCAT+CGG - chr8_1:19176510-19176529 None:intergenic 30.0%
!! AAGCTTGTTAACATTATCAC+TGG - chr8_1:19176567-19176586 None:intergenic 30.0%
! AATGTTAACAAGCTTTTGGT+TGG + chr8_1:19176572-19176591 Msa1183770:five_prime_UTR 30.0%
TTTGCACTTGTTTCCATAAA+AGG - chr8_1:19176811-19176830 None:intergenic 30.0%
! TTTTATGGAAACAAGTGCAA+AGG + chr8_1:19176810-19176829 Msa1183770:five_prime_UTR 30.0%
!!! GTTGATTTTTTCGAAAGCTT+TGG - chr8_1:19177186-19177205 None:intergenic 30.0%
TTGTTCAGTAGTGAAAAAGT+CGG - chr8_1:19177555-19177574 None:intergenic 30.0%
ACTTCATCATGAATGTAGAA+TGG + chr8_1:19177595-19177614 Msa1183770:intron 30.0%
ATGTATACATGAAGTTCGTA+TGG - chr8_1:19178042-19178061 None:intergenic 30.0%
ATAGCAGTACGAACTATAAA+AGG + chr8_1:19178225-19178244 Msa1183770:five_prime_UTR 30.0%
TAGCAGTACGAACTATAAAA+GGG + chr8_1:19178226-19178245 Msa1183770:five_prime_UTR 30.0%
ATGGAAAAAACGAGTATGTA+TGG + chr8_1:19178595-19178614 Msa1183770:five_prime_UTR 30.0%
TGGAAAAAACGAGTATGTAT+GGG + chr8_1:19178596-19178615 Msa1183770:five_prime_UTR 30.0%
! AAGTATTGTCACATCAAAAG+TGG + chr8_1:19178747-19178766 Msa1183770:five_prime_UTR 30.0%
AGTATTGTCACATCAAAAGT+GGG + chr8_1:19178748-19178767 Msa1183770:five_prime_UTR 30.0%
CAGCCATTTGATTAAAGTAA+TGG + chr8_1:19178825-19178844 Msa1183770:five_prime_UTR 30.0%
GGACCATTACTTTAATCAAA+TGG - chr8_1:19178831-19178850 None:intergenic 30.0%
!! ATTTTAAGGGGAAATGAATC+TGG - chr8_1:19178852-19178871 None:intergenic 30.0%
! CCTATTTTGTGGATTTTAAG+GGG - chr8_1:19178864-19178883 None:intergenic 30.0%
! GCCTATTTTGTGGATTTTAA+GGG - chr8_1:19178865-19178884 None:intergenic 30.0%
! AGCCTATTTTGTGGATTTTA+AGG - chr8_1:19178866-19178885 None:intergenic 30.0%
CACAAAATAGGCTAATGAAA+GGG + chr8_1:19178873-19178892 Msa1183770:five_prime_UTR 30.0%
ACTATCTATGTATTGGAAAG+TGG - chr8_1:19178906-19178925 None:intergenic 30.0%
CTTTCCAATACATAGATAGT+TGG + chr8_1:19178906-19178925 Msa1183770:five_prime_UTR 30.0%
CTGAGTTTAAAGAAAATGGA+TGG - chr8_1:19179148-19179167 None:intergenic 30.0%
! CGTTCTGAGTTTAAAGAAAA+TGG - chr8_1:19179152-19179171 None:intergenic 30.0%
AACAAGGTGATGAAACAAAA+TGG - chr8_1:19179210-19179229 None:intergenic 30.0%
AATATGGAAATGGAAAGCTA+TGG - chr8_1:19179238-19179257 None:intergenic 30.0%
ACTGTTTACTAGAGTGATAA+TGG - chr8_1:19179302-19179321 None:intergenic 30.0%
ATACTTGAATTCCACAGATT+TGG + chr8_1:19179376-19179395 Msa1183770:intron 30.0%
!! GTCATTTTATACCAAATCTG+TGG - chr8_1:19179390-19179409 None:intergenic 30.0%
CTTGGTTATGGAAAAGAAAT+TGG + chr8_1:19179474-19179493 Msa1183770:CDS 30.0%
! ACTGAATATGACCTTTTATC+TGG - chr8_1:19179591-19179610 None:intergenic 30.0%
ATTGCACTTAGTGTAAAGAA+TGG + chr8_1:19179654-19179673 Msa1183770:CDS 30.0%
TTGCACTTAGTGTAAAGAAT+GGG + chr8_1:19179655-19179674 Msa1183770:CDS 30.0%
TTGTTTCAGGAAGTTGTAAA+AGG - chr8_1:19179719-19179738 None:intergenic 30.0%
! CTTGGACTTCAGATATTTTA+CGG - chr8_1:19179761-19179780 None:intergenic 30.0%
! TGAAGATTTTTGCATCAAAC+CGG - chr8_1:19179811-19179830 None:intergenic 30.0%
TAATCTTGGATATACACCAT+TGG + chr8_1:19179866-19179885 Msa1183770:CDS 30.0%
TGATATGCATGGTAAAATGA+AGG - chr8_1:19179990-19180009 None:intergenic 30.0%
GCAAAAATGATCTTAGACTA+TGG + chr8_1:19180053-19180072 Msa1183770:CDS 30.0%
! AGCTGTTTCATCATACAAAA+GGG - chr8_1:19180195-19180214 None:intergenic 30.0%
! AAAACTTTTCTTGAAGCACA+TGG + chr8_1:19180236-19180255 Msa1183770:CDS 30.0%
GAAATCAATGTATGCTATCA+AGG + chr8_1:19180526-19180545 Msa1183770:CDS 30.0%
TGTATGCTATCAAGGAAAAA+TGG + chr8_1:19180534-19180553 Msa1183770:CDS 30.0%
GTATGCTATCAAGGAAAAAT+GGG + chr8_1:19180535-19180554 Msa1183770:CDS 30.0%
! GAGCTTAAATTCAAGTTTCA+AGG + chr8_1:19180616-19180635 Msa1183770:CDS 30.0%
AATTGGACGATATTAATTCC+TGG - chr8_1:19180653-19180672 None:intergenic 30.0%
CTTTCTACAACTACATGATA+TGG - chr8_1:19180966-19180985 None:intergenic 30.0%
!! TGTAGAAAGTTTGAGACTTT+TGG + chr8_1:19180977-19180996 Msa1183770:CDS 30.0%
CGTTGTATACTAGATAGTTT+GGG - chr8_1:19181145-19181164 None:intergenic 30.0%
TCGTTGTATACTAGATAGTT+TGG - chr8_1:19181146-19181165 None:intergenic 30.0%
TGACCTGTGTAATAAAGTAA+AGG + chr8_1:19181255-19181274 Msa1183770:CDS 30.0%
! CATTTTCAGCAGTTATTGTT+GGG - chr8_1:19181327-19181346 None:intergenic 30.0%
! ACATTTTCAGCAGTTATTGT+TGG - chr8_1:19181328-19181347 None:intergenic 30.0%
TGAAAATGTTACTCAACCAA+GGG + chr8_1:19181339-19181358 Msa1183770:CDS 30.0%
CCAATTGTTTGATACTCATA+AGG - chr8_1:19181614-19181633 None:intergenic 30.0%
CCTTATGAGTATCAAACAAT+TGG + chr8_1:19181611-19181630 Msa1183770:CDS 30.0%
TTGTAACAAGTTACTAGACT+TGG + chr8_1:19182025-19182044 Msa1183770:three_prime_UTR 30.0%
ACTAGACTTGGAATTCTATA+AGG + chr8_1:19182037-19182056 Msa1183770:three_prime_UTR 30.0%
AACTAAAGCATGCATGCATA+TGG + chr8_1:19174445-19174464 Msa1183770:intron 35.0%
TGAACAGATAATCACTGCAA+AGG - chr8_1:19175075-19175094 None:intergenic 35.0%
! GTTTCTCCATCCTTTTATAC+TGG + chr8_1:19175253-19175272 Msa1183770:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr8_1:19175446-19175465 Msa1183770:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr8_1:19175465-19175484 Msa1183770:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr8_1:19175446-19175465 Msa1183770:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr8_1:19175465-19175484 Msa1183770:intron 35.0%
!! TCTATGAATGGGATTTTTGG+AGG + chr8_1:19175654-19175673 Msa1183770:intron 35.0%
TAGTTTCTCCATAGATCTTG+AGG + chr8_1:19175790-19175809 Msa1183770:intron 35.0%
! GCAGTATTATGGAAGTGTAA+AGG - chr8_1:19175974-19175993 None:intergenic 35.0%
TGTATTGTGCAGCAGTATTA+TGG - chr8_1:19175985-19176004 None:intergenic 35.0%
ACTCACAAAATCAACTCCAA+TGG - chr8_1:19176074-19176093 None:intergenic 35.0%
!! GTTTTGATCTGTTCTTGTAG+TGG + chr8_1:19176310-19176329 Msa1183770:intron 35.0%
AGTTTAAACATGGAACACTC+CGG + chr8_1:19176429-19176448 Msa1183770:intron 35.0%
TCTCTAATAACGTGTTCCTT+TGG + chr8_1:19176465-19176484 Msa1183770:intron 35.0%
CATCATAAACAATCTGCCAA+AGG - chr8_1:19176484-19176503 None:intergenic 35.0%
TAACATTATCACTGGCATAG+CGG - chr8_1:19176559-19176578 None:intergenic 35.0%
! AGAGAGAAAAAAAGAGTGTG+AGG - chr8_1:19176757-19176776 None:intergenic 35.0%
!!! TCTTTTTTTCTCTCTATCGC+AGG + chr8_1:19176762-19176781 Msa1183770:intron 35.0%
CAGGAATTTGCAGATCAAAT+CGG + chr8_1:19176781-19176800 Msa1183770:intron 35.0%
! TCAAATCGGCATACCTTTTA+TGG + chr8_1:19176795-19176814 Msa1183770:five_prime_UTR 35.0%
AAGGCATGGTACATTAAACT+TGG - chr8_1:19176949-19176968 None:intergenic 35.0%
TGTTCAGTAGTGAAAAAGTC+GGG - chr8_1:19177554-19177573 None:intergenic 35.0%
AACCAGTTGGTCAAAAAAGT+GGG + chr8_1:19177672-19177691 Msa1183770:five_prime_UTR 35.0%
! TTTCTTTTGCTCAGTTGCTT+TGG + chr8_1:19177951-19177970 Msa1183770:five_prime_UTR 35.0%
TGCATAGTCATAAGATTGCA+TGG - chr8_1:19178122-19178141 None:intergenic 35.0%
AACAGGATAAACAGTAGGTA+AGG - chr8_1:19178324-19178343 None:intergenic 35.0%
! TAATGTTATTGGTGGGTAAC+AGG - chr8_1:19178341-19178360 None:intergenic 35.0%
CCACTTGTAATGTTATTGGT+GGG - chr8_1:19178348-19178367 None:intergenic 35.0%
TCCACTTGTAATGTTATTGG+TGG - chr8_1:19178349-19178368 None:intergenic 35.0%
AAGTGAATTTGAATCTGACG+TGG - chr8_1:19178381-19178400 None:intergenic 35.0%
! GTGACAATACTTTTGTTCAG+AGG - chr8_1:19178739-19178758 None:intergenic 35.0%
CCCCTTAAAATCCACAAAAT+AGG + chr8_1:19178861-19178880 Msa1183770:five_prime_UTR 35.0%
!! CCTTTCATTAGCCTATTTTG+TGG - chr8_1:19178875-19178894 None:intergenic 35.0%
CCACAAAATAGGCTAATGAA+AGG + chr8_1:19178872-19178891 Msa1183770:five_prime_UTR 35.0%
AGTGAAGAAACGTGATTGAA+TGG - chr8_1:19178934-19178953 None:intergenic 35.0%
! GAACGAATGAGGTTCATTTT+TGG - chr8_1:19179007-19179026 None:intergenic 35.0%
ACAAACCTGAGAAAAAACAC+TGG - chr8_1:19179058-19179077 None:intergenic 35.0%
AGGTGATGAAACAAAATGGA+TGG - chr8_1:19179206-19179225 None:intergenic 35.0%
GAAAGCTATGGCAAAAAACA+AGG - chr8_1:19179226-19179245 None:intergenic 35.0%
ATCAATAATACACCCACTGT+TGG + chr8_1:19179411-19179430 Msa1183770:CDS 35.0%
TCAAATTCCATACCAACAGT+GGG - chr8_1:19179426-19179445 None:intergenic 35.0%
! TAGATGAAGCTTGGGAATTT+TGG + chr8_1:19179451-19179470 Msa1183770:CDS 35.0%
! AGGTTTGTTTGTAGTAAGGA+GGG + chr8_1:19179555-19179574 Msa1183770:CDS 35.0%
! GAATATGACCTTTTATCTGG+TGG - chr8_1:19179588-19179607 None:intergenic 35.0%
CATATTCAGTTAAGAACCCT+AGG + chr8_1:19179601-19179620 Msa1183770:CDS 35.0%
TTTGTGATCACAGAGTTCAA+AGG + chr8_1:19179681-19179700 Msa1183770:CDS 35.0%
TTTCAGGAAGTTGTAAAAGG+TGG - chr8_1:19179716-19179735 None:intergenic 35.0%
AGCATGAAGTATGGAGAAAT+TGG + chr8_1:19179924-19179943 Msa1183770:CDS 35.0%
! AACTAGTCACAAACGTGTTT+TGG + chr8_1:19180024-19180043 Msa1183770:CDS 35.0%
! ACTAGTCACAAACGTGTTTT+GGG + chr8_1:19180025-19180044 Msa1183770:CDS 35.0%
!!! AGACTATGGTTATTTTGGTG+AGG + chr8_1:19180067-19180086 Msa1183770:CDS 35.0%
! TTTTGGTGAGGTAGTTTCTT+TGG + chr8_1:19180079-19180098 Msa1183770:CDS 35.0%
! CAGCTGTTTCATCATACAAA+AGG - chr8_1:19180196-19180215 None:intergenic 35.0%
AAACAGCTGAGTCATTCAAA+TGG + chr8_1:19180207-19180226 Msa1183770:CDS 35.0%
CAGAATGGGATTAAACATCT+TGG + chr8_1:19180368-19180387 Msa1183770:CDS 35.0%
AAGCAATGTTTGAAGAAGCT+TGG + chr8_1:19180459-19180478 Msa1183770:CDS 35.0%
TTGATGTTCATGACAAGAAG+TGG + chr8_1:19180501-19180520 Msa1183770:CDS 35.0%
TGATGTTCATGACAAGAAGT+GGG + chr8_1:19180502-19180521 Msa1183770:CDS 35.0%
! TCTCGAAGTGTTTGAAGAAT+TGG - chr8_1:19180670-19180689 None:intergenic 35.0%
AGTCAAGACATAAACTACCA+AGG + chr8_1:19180735-19180754 Msa1183770:CDS 35.0%
! GAATGCCCATATTTTATCCT+TGG - chr8_1:19180755-19180774 None:intergenic 35.0%
TCTACAACTACATGATATGG+AGG - chr8_1:19180963-19180982 None:intergenic 35.0%
!! CTTTGATTTTAGGGGAAATG+AGG + chr8_1:19181108-19181127 Msa1183770:CDS 35.0%
CAAGCAACTTTGCTCTATTA+TGG + chr8_1:19181168-19181187 Msa1183770:CDS 35.0%
CCTCCTTTACTTTATTACAC+AGG - chr8_1:19181261-19181280 None:intergenic 35.0%
CCTGTGTAATAAAGTAAAGG+AGG + chr8_1:19181258-19181277 Msa1183770:CDS 35.0%
AAAGTCAATGCTCATGATGA+AGG + chr8_1:19181295-19181314 Msa1183770:CDS 35.0%
CTGAAAATGTTACTCAACCA+AGG + chr8_1:19181338-19181357 Msa1183770:CDS 35.0%
GAAAATGTTACTCAACCAAG+GGG + chr8_1:19181340-19181359 Msa1183770:CDS 35.0%
!!! GTTGGAGCTTTTTTTGCTTT+AGG - chr8_1:19181427-19181446 None:intergenic 35.0%
TGTTGCATCTATAAGTCAGA+TGG + chr8_1:19181562-19181581 Msa1183770:CDS 35.0%
TCAAACAATTGGGAACAGTT+TGG + chr8_1:19181622-19181641 Msa1183770:CDS 35.0%
GAGTCACATAATCAGAATGA+AGG + chr8_1:19181790-19181809 Msa1183770:CDS 35.0%
GAAAAGTCATTCATGCTAAG+AGG - chr8_1:19181834-19181853 None:intergenic 35.0%
TACACGTGGAAACTGGAATT+GGG - chr8_1:19173849-19173868 None:intergenic 40.0%
CACAAAGCTGATCCAATCTA+GGG - chr8_1:19174267-19174286 None:intergenic 40.0%
TCACAAAGCTGATCCAATCT+AGG - chr8_1:19174268-19174287 None:intergenic 40.0%
! GTTGCTTCTTGTTTCTCACA+AGG + chr8_1:19174478-19174497 Msa1183770:intron 40.0%
CTGTTCAAGCTCCTTCTTAT+TGG + chr8_1:19175088-19175107 Msa1183770:five_prime_UTR 40.0%
! TGTAATGGGGTTCTTGCTAT+TGG + chr8_1:19175360-19175379 Msa1183770:intron 40.0%
!! GTAATGGGGTTCTTGCTATT+GGG + chr8_1:19175361-19175380 Msa1183770:intron 40.0%
GTTCACATTTAACCGCACAT+TGG - chr8_1:19175399-19175418 None:intergenic 40.0%
GAACGAAGAAAAGGACATGA+CGG + chr8_1:19175415-19175434 Msa1183770:intron 40.0%
AACGAAGAAAAGGACATGAC+GGG + chr8_1:19175416-19175435 Msa1183770:intron 40.0%
! TGACGGGACAGAAATTTTGT+AGG + chr8_1:19175432-19175451 Msa1183770:intron 40.0%
GAATCTACAGGTTGTAAGGT+AGG + chr8_1:19175563-19175582 Msa1183770:intron 40.0%
!! TAAGGTAGGCATTGATGACA+TGG + chr8_1:19175577-19175596 Msa1183770:intron 40.0%
!! AATGGGATTTTTGGAGGCTT+AGG + chr8_1:19175660-19175679 Msa1183770:intron 40.0%
!! ATTTTTGGAGGCTTAGGCTT+TGG + chr8_1:19175666-19175685 Msa1183770:intron 40.0%
! GGCACTGAAGAACAAAGTTA+GGG - chr8_1:19175845-19175864 None:intergenic 40.0%
!! AGGCACTGAAGAACAAAGTT+AGG - chr8_1:19175846-19175865 None:intergenic 40.0%
!! TTGTGCTGTGTATTTCTGGA+AGG + chr8_1:19175927-19175946 Msa1183770:intron 40.0%
GATAGCTACATAAGCACCAT+TGG + chr8_1:19176055-19176074 Msa1183770:five_prime_UTR 40.0%
GAAAATTCGAACTGTTGAGC+AGG + chr8_1:19176178-19176197 Msa1183770:intron 40.0%
ATAACCAGTAGCTACTATCG+TGG + chr8_1:19176363-19176382 Msa1183770:five_prime_UTR 40.0%
TAACCAGTAGCTACTATCGT+GGG + chr8_1:19176364-19176383 Msa1183770:five_prime_UTR 40.0%
GCTTCAATAATGTGAAGCAG+TGG + chr8_1:19176519-19176538 Msa1183770:five_prime_UTR 40.0%
GTCTGTGTTCGTGTTTACTT+CGG + chr8_1:19176703-19176722 Msa1183770:intron 40.0%
! AAAAAGAGTGTGAGGTGTTC+TGG - chr8_1:19176749-19176768 None:intergenic 40.0%
TGCAAAGGATGCTACAAATG+TGG + chr8_1:19176825-19176844 Msa1183770:five_prime_UTR 40.0%
AAGGATGCTACAAATGTGGA+AGG + chr8_1:19176829-19176848 Msa1183770:five_prime_UTR 40.0%
!! AAATGTGGAAGGAGCATTCA+TGG + chr8_1:19176840-19176859 Msa1183770:five_prime_UTR 40.0%
TAATGAGCACCTATCCTTGA+TGG - chr8_1:19176878-19176897 None:intergenic 40.0%
!! ATGTACCATGCCTTTGAAGT+AGG + chr8_1:19176955-19176974 Msa1183770:intron 40.0%
ATTGTTAGACCATCCCCAAT+GGG + chr8_1:19177023-19177042 Msa1183770:intron 40.0%
!! GGTCTCAAATTTTGAAGACC+TGG + chr8_1:19177048-19177067 Msa1183770:intron 40.0%
TTGAAGACCTGGTACCTATT+AGG + chr8_1:19177059-19177078 Msa1183770:intron 40.0%
AAAAACCTTTCTCCCCAATG+GGG - chr8_1:19177090-19177109 None:intergenic 40.0%
CAAAAACCTTTCTCCCCAAT+GGG - chr8_1:19177091-19177110 None:intergenic 40.0%
! CATTGGGGAGAAAGGTTTTT+GGG + chr8_1:19177090-19177109 Msa1183770:intron 40.0%
! ATTGGGGAGAAAGGTTTTTG+GGG + chr8_1:19177091-19177110 Msa1183770:intron 40.0%
AATGGAGACACCTAACATTG+GGG - chr8_1:19177146-19177165 None:intergenic 40.0%
CAATGGAGACACCTAACATT+GGG - chr8_1:19177147-19177166 None:intergenic 40.0%
ACAATGGAGACACCTAACAT+TGG - chr8_1:19177148-19177167 None:intergenic 40.0%
AATGTTAGGTGTCTCCATTG+TGG + chr8_1:19177147-19177166 Msa1183770:intron 40.0%
!! GAAACTAAGAGCATCCACAA+TGG - chr8_1:19177164-19177183 None:intergenic 40.0%
ATCCATACATTCATGCAGTC+AGG + chr8_1:19177363-19177382 Msa1183770:intron 40.0%
TCCATACATTCATGCAGTCA+GGG + chr8_1:19177364-19177383 Msa1183770:intron 40.0%
ACTGTCAGATATCGATCCAA+CGG - chr8_1:19177400-19177419 None:intergenic 40.0%
AAATCTGGACCGTCTAATCT+CGG + chr8_1:19177471-19177490 Msa1183770:intron 40.0%
ATTCATGCAGACAGAGATGT+CGG - chr8_1:19177508-19177527 None:intergenic 40.0%
CAACCAGTTGGTCAAAAAAG+TGG + chr8_1:19177671-19177690 Msa1183770:five_prime_UTR 40.0%
!! CACGGTGGATTATGCAATAT+TGG - chr8_1:19177784-19177803 None:intergenic 40.0%
ATATTGCATAATCCACCGTG+TGG + chr8_1:19177784-19177803 Msa1183770:five_prime_UTR 40.0%
AAACCAATTCCCAAACCACA+CGG - chr8_1:19177802-19177821 None:intergenic 40.0%
TGGGTAACAGGATAAACAGT+AGG - chr8_1:19178329-19178348 None:intergenic 40.0%
CCCACCAATAACATTACAAG+TGG + chr8_1:19178345-19178364 Msa1183770:five_prime_UTR 40.0%
TTGACAGTACACTCTCTTGA+AGG + chr8_1:19178464-19178483 Msa1183770:five_prime_UTR 40.0%
TCTTGAAGGTTCTTCTCAGT+AGG + chr8_1:19178478-19178497 Msa1183770:five_prime_UTR 40.0%
CTTGAAGGTTCTTCTCAGTA+GGG + chr8_1:19178479-19178498 Msa1183770:five_prime_UTR 40.0%
TTGAAGGTTCTTCTCAGTAG+GGG + chr8_1:19178480-19178499 Msa1183770:five_prime_UTR 40.0%
!!! GATTTTCGGTTCGGATTTGA+CGG - chr8_1:19178535-19178554 None:intergenic 40.0%
! CGCATCATAGATTTTCGGTT+CGG - chr8_1:19178544-19178563 None:intergenic 40.0%
CGAACCGAAAATCTATGATG+CGG + chr8_1:19178542-19178561 Msa1183770:five_prime_UTR 40.0%
GAACCGAAAATCTATGATGC+GGG + chr8_1:19178543-19178562 Msa1183770:five_prime_UTR 40.0%
!!! CGGTTGTCGGGTTTTAAAAA+TGG + chr8_1:19178576-19178595 Msa1183770:five_prime_UTR 40.0%
! CGAGTATGTATGGGTTTTCA+CGG + chr8_1:19178605-19178624 Msa1183770:five_prime_UTR 40.0%
!!! ACTAGCCAGTGTTTTTTCTC+AGG + chr8_1:19179050-19179069 Msa1183770:five_prime_UTR 40.0%
TAATACACCCACTGTTGGTA+TGG + chr8_1:19179416-19179435 Msa1183770:CDS 40.0%
GTCAAATTCCATACCAACAG+TGG - chr8_1:19179427-19179446 None:intergenic 40.0%
TTGACAGTGTAGATGAAGCT+TGG + chr8_1:19179442-19179461 Msa1183770:CDS 40.0%
TGACAGTGTAGATGAAGCTT+GGG + chr8_1:19179443-19179462 Msa1183770:CDS 40.0%
!!! TGGGAATTTTGGCTTGGTTA+TGG + chr8_1:19179462-19179481 Msa1183770:CDS 40.0%
AAAGACGGCTCAATTAGATC+AGG + chr8_1:19179531-19179550 Msa1183770:CDS 40.0%
! AGGCAGGTTTGTTTGTAGTA+AGG + chr8_1:19179551-19179570 Msa1183770:CDS 40.0%
! CAGGTTTGTTTGTAGTAAGG+AGG + chr8_1:19179554-19179573 Msa1183770:CDS 40.0%
!! GCTAACATGTGTGTTGTTTC+AGG - chr8_1:19179732-19179751 None:intergenic 40.0%
CCATTTCAATCTCATGTGCT+TGG - chr8_1:19179779-19179798 None:intergenic 40.0%
CCAAGCACATGAGATTGAAA+TGG + chr8_1:19179776-19179795 Msa1183770:CDS 40.0%
ATTGAAATGGCAGAAGACTC+CGG + chr8_1:19179789-19179808 Msa1183770:CDS 40.0%
!! AGGTAGTTTCTAGCATCCAA+TGG - chr8_1:19179885-19179904 None:intergenic 40.0%
AGACAACGAAGCATGAAGTA+TGG + chr8_1:19179915-19179934 Msa1183770:CDS 40.0%
TGGAGAAATTGGTTGTCTCA+TGG + chr8_1:19179935-19179954 Msa1183770:CDS 40.0%
CGCAATCCATTTGATATGCA+TGG - chr8_1:19180001-19180020 None:intergenic 40.0%
AAGCCTGAAAACAATGCCAA+TGG - chr8_1:19180137-19180156 None:intergenic 40.0%
TTTCAGGCTTCAACCACTAT+AGG + chr8_1:19180147-19180166 Msa1183770:CDS 40.0%
TTCAGGCTTCAACCACTATA+GGG + chr8_1:19180148-19180167 Msa1183770:CDS 40.0%
!! TATAGGGGCACAGTCATTTT+TGG + chr8_1:19180164-19180183 Msa1183770:CDS 40.0%
TGATCAGTGAACAAAGTTCG+TGG - chr8_1:19180272-19180291 None:intergenic 40.0%
CACTGATCAAGACCAATCAA+TGG + chr8_1:19180283-19180302 Msa1183770:CDS 40.0%
CTAGTGCTTTAGCCATTGAT+TGG - chr8_1:19180298-19180317 None:intergenic 40.0%
ACATGGCACTTAATGCAGAA+TGG + chr8_1:19180353-19180372 Msa1183770:CDS 40.0%
CATGGCACTTAATGCAGAAT+GGG + chr8_1:19180354-19180373 Msa1183770:CDS 40.0%
!! TGTTATTGCTTTTGTCGGTG+TGG + chr8_1:19180901-19180920 Msa1183770:CDS 40.0%
CCTCAAAAACCTTCAAAGCA+TGG - chr8_1:19181015-19181034 None:intergenic 40.0%
!!! CCATGCTTTGAAGGTTTTTG+AGG + chr8_1:19181012-19181031 Msa1183770:CDS 40.0%
TGGACAAAAAATGCACGAAG+TGG + chr8_1:19181079-19181098 Msa1183770:CDS 40.0%
!! TTTTAGGGGAAATGAGGTTG+TGG + chr8_1:19181114-19181133 Msa1183770:CDS 40.0%
! ACAGGTCATGCAATCCATTT+TGG - chr8_1:19181243-19181262 None:intergenic 40.0%
! TGAGATCTTTGACTCGATGA+CGG - chr8_1:19181457-19181476 None:intergenic 40.0%
!! TCTATAAGTCAGATGGACTG+CGG + chr8_1:19181569-19181588 Msa1183770:CDS 40.0%
! GAATGACTTTTCTGAGCTAC+TGG + chr8_1:19181842-19181861 Msa1183770:three_prime_UTR 40.0%
! TTTTCTGAGCTACTGGTGTT+TGG + chr8_1:19181849-19181868 Msa1183770:three_prime_UTR 40.0%
CAACGGAGAAGAGAAGAAGA+AGG - chr8_1:19173823-19173842 None:intergenic 45.0%
CTTCTTCTTCTCTTCTCCGT+TGG + chr8_1:19173821-19173840 Msa1183770:five_prime_UTR 45.0%
AAACTGGAATTGGGCACCAA+CGG - chr8_1:19173840-19173859 None:intergenic 45.0%
GTACACGTGGAAACTGGAAT+TGG - chr8_1:19173850-19173869 None:intergenic 45.0%
AAGTGTGGAGGAAGAGTGAT+CGG - chr8_1:19173881-19173900 None:intergenic 45.0%
! TTCAGGATTCATGACGGAGA+AGG - chr8_1:19173906-19173925 None:intergenic 45.0%
CTCCTTCTTATTGGAGACTC+TGG + chr8_1:19175097-19175116 Msa1183770:five_prime_UTR 45.0%
CACCAGAGTCTCCAATAAGA+AGG - chr8_1:19175102-19175121 None:intergenic 45.0%
CTTATTGGAGACTCTGGTGT+TGG + chr8_1:19175103-19175122 Msa1183770:five_prime_UTR 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr8_1:19175450-19175469 Msa1183770:intron 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr8_1:19175450-19175469 Msa1183770:intron 45.0%
! ATTGATGACATGGAGGTGGA+GGG + chr8_1:19175587-19175606 Msa1183770:intron 45.0%
TGGAGGTGGAGGGAATATAA+TGG + chr8_1:19175597-19175616 Msa1183770:intron 45.0%
AGGTGGAGGGAATATAATGG+AGG + chr8_1:19175600-19175619 Msa1183770:intron 45.0%
! GGTGGAGGGAATATAATGGA+GGG + chr8_1:19175601-19175620 Msa1183770:intron 45.0%
! GGGAATATAATGGAGGGAAC+TGG + chr8_1:19175607-19175626 Msa1183770:intron 45.0%
! ATAATGGAGGGAACTGGACT+AGG + chr8_1:19175613-19175632 Msa1183770:intron 45.0%
TAATGGAGGGAACTGGACTA+GGG + chr8_1:19175614-19175633 Msa1183770:intron 45.0%
ATTCGAACTGTTGAGCAGGA+TGG + chr8_1:19176182-19176201 Msa1183770:five_prime_UTR 45.0%
TTCGAACTGTTGAGCAGGAT+GGG + chr8_1:19176183-19176202 Msa1183770:five_prime_UTR 45.0%
TGTCCTAAATCGTTCTTGCC+CGG - chr8_1:19176343-19176362 None:intergenic 45.0%
AACCAGTAGCTACTATCGTG+GGG + chr8_1:19176365-19176384 Msa1183770:five_prime_UTR 45.0%
TAAGGCTGAGCCTACTTCAA+AGG - chr8_1:19176968-19176987 None:intergenic 45.0%
CATTGTTAGACCATCCCCAA+TGG + chr8_1:19177022-19177041 Msa1183770:intron 45.0%
TTGTTAGACCATCCCCAATG+GGG + chr8_1:19177024-19177043 Msa1183770:intron 45.0%
! AAATTTGAGACCCCCCCATT+GGG - chr8_1:19177040-19177059 None:intergenic 45.0%
! AAAATTTGAGACCCCCCCAT+TGG - chr8_1:19177041-19177060 None:intergenic 45.0%
CTATTAGGTGTACCCCCATT+GGG + chr8_1:19177074-19177093 Msa1183770:intron 45.0%
TATTAGGTGTACCCCCATTG+GGG + chr8_1:19177075-19177094 Msa1183770:intron 45.0%
AAAACCTTTCTCCCCAATGG+GGG - chr8_1:19177089-19177108 None:intergenic 45.0%
CCAAAAACCTTTCTCCCCAA+TGG - chr8_1:19177092-19177111 None:intergenic 45.0%
! CCATTGGGGAGAAAGGTTTT+TGG + chr8_1:19177089-19177108 Msa1183770:intron 45.0%
CACTTAAGACCCCCAATGTT+AGG + chr8_1:19177133-19177152 Msa1183770:intron 45.0%
ATGGAGACACCTAACATTGG+GGG - chr8_1:19177145-19177164 None:intergenic 45.0%
TCCCTGACTGCATGAATGTA+TGG - chr8_1:19177368-19177387 None:intergenic 45.0%
TGACATACGGGCTTGAAATC+TGG + chr8_1:19177456-19177475 Msa1183770:intron 45.0%
TCTCTGTCTGCATGAATGTG+TGG + chr8_1:19177511-19177530 Msa1183770:intron 45.0%
TTGCATTGTTTGCGGATGGT+TGG - chr8_1:19177625-19177644 None:intergenic 45.0%
AACCATCCGCAAACAATGCA+AGG + chr8_1:19177624-19177643 Msa1183770:five_prime_UTR 45.0%
TGTCCTCTAATCTGCACTGT+TGG - chr8_1:19177653-19177672 None:intergenic 45.0%
CAGATTAGAGGACAACCAGT+TGG + chr8_1:19177659-19177678 Msa1183770:five_prime_UTR 45.0%
!!! CACCCACTTTTTTGACCAAC+TGG - chr8_1:19177677-19177696 None:intergenic 45.0%
CATAATCCACCGTGTGGTTT+GGG + chr8_1:19177790-19177809 Msa1183770:five_prime_UTR 45.0%
CATGGCACGAATACATGAAG+TGG - chr8_1:19178104-19178123 None:intergenic 45.0%
! GGTTCGGATTTGACGGTTTT+CGG - chr8_1:19178528-19178547 None:intergenic 45.0%
! CCACCCGCATCATAGATTTT+CGG - chr8_1:19178549-19178568 None:intergenic 45.0%
CGAAAATCTATGATGCGGGT+GGG + chr8_1:19178547-19178566 Msa1183770:five_prime_UTR 45.0%
TTCATTGTTTCGGTCGGTCA+CGG - chr8_1:19178666-19178685 None:intergenic 45.0%
GGCGCCAACTATCTATGTAT+TGG - chr8_1:19178913-19178932 None:intergenic 45.0%
GAACCTCATTCGTTCTACGA+CGG + chr8_1:19179012-19179031 Msa1183770:five_prime_UTR 45.0%
!!! GAAGCTTGGGAATTTTGGCT+TGG + chr8_1:19179456-19179475 Msa1183770:CDS 45.0%
GTCATCGACCACCAGATAAA+AGG + chr8_1:19179577-19179596 Msa1183770:CDS 45.0%
CAGTTCTTGTGTCAGACCTA+GGG - chr8_1:19179620-19179639 None:intergenic 45.0%
GCTGGAGGAAGAACTAATCT+TGG + chr8_1:19179852-19179871 Msa1183770:CDS 45.0%
TTCGTTGTCTTCTTGCTTGG+AGG - chr8_1:19179905-19179924 None:intergenic 45.0%
TGCTTCGTTGTCTTCTTGCT+TGG - chr8_1:19179908-19179927 None:intergenic 45.0%
CAATGGTCGATTAGCACGAT+TGG - chr8_1:19180120-19180139 None:intergenic 45.0%
CAATCGTGCTAATCGACCAT+TGG + chr8_1:19180118-19180137 Msa1183770:CDS 45.0%
! CGACCATTGGCATTGTTTTC+AGG + chr8_1:19180131-19180150 Msa1183770:CDS 45.0%
TCAGGCTTCAACCACTATAG+GGG + chr8_1:19180149-19180168 Msa1183770:CDS 45.0%
AAATGACTGTGCCCCTATAG+TGG - chr8_1:19180163-19180182 None:intergenic 45.0%
! AATGGCTAAAGCACTAGCTG+AGG + chr8_1:19180301-19180320 Msa1183770:CDS 45.0%
ATGGGCAGCATGTTACATGA+AGG + chr8_1:19180553-19180572 Msa1183770:CDS 45.0%
!! ATGAAGGAAGCATTCACCCT+TGG + chr8_1:19180569-19180588 Msa1183770:CDS 45.0%
TTGAGTACTTCGCATGCCAA+GGG - chr8_1:19180588-19180607 None:intergenic 45.0%
TTCAAGGCATGCATGAAACC+AGG + chr8_1:19180632-19180651 Msa1183770:CDS 45.0%
ACACTTCGAGAGAGTTGTTG+CGG + chr8_1:19180679-19180698 Msa1183770:CDS 45.0%
AGAGAGTTGTTGCGGAGAAA+AGG + chr8_1:19180687-19180706 Msa1183770:CDS 45.0%
!! ATGGGCATTCACCGATTCTA+AGG + chr8_1:19180765-19180784 Msa1183770:CDS 45.0%
TCTGCGAGTTGCCTTAGAAT+CGG - chr8_1:19180779-19180798 None:intergenic 45.0%
!! ATTGCTTTTGTCGGTGTGGA+AGG + chr8_1:19180905-19180924 Msa1183770:CDS 45.0%
CATGATATGGAGGACTGTAC+AGG - chr8_1:19180953-19180972 None:intergenic 45.0%
! GCTTTGTTGCCATGCTTTGA+AGG + chr8_1:19181003-19181022 Msa1183770:CDS 45.0%
AGCTCGTGCAAATCTTCGAA+AGG - chr8_1:19181217-19181236 None:intergenic 45.0%
TTTCGAAGATTTGCACGAGC+TGG + chr8_1:19181216-19181235 Msa1183770:CDS 45.0%
TCTCGGTTCTTAAATCCCCT+TGG - chr8_1:19181358-19181377 None:intergenic 45.0%
AGGGGATTTAAGAACCGAGA+TGG + chr8_1:19181358-19181377 Msa1183770:CDS 45.0%
GGGGATTTAAGAACCGAGAT+GGG + chr8_1:19181359-19181378 Msa1183770:CDS 45.0%
!! AGAACCGAGATGGGTTATCA+AGG + chr8_1:19181368-19181387 Msa1183770:CDS 45.0%
! TACGCCTTGATAACCCATCT+CGG - chr8_1:19181375-19181394 None:intergenic 45.0%
GTCATCGAGTCAAAGATCTC+AGG + chr8_1:19181456-19181475 Msa1183770:CDS 45.0%
!!! ACATTTTTTTTTTATTTTAT+AGG - chr8_1:19178257-19178276 None:intergenic 5.0%
! ATGACGGAGAAGGTGAAGTG+TGG - chr8_1:19173896-19173915 None:intergenic 50.0%
CCTGATTAGCGTCCAATGTG+CGG + chr8_1:19175384-19175403 Msa1183770:intron 50.0%
!! GGTAGGCATTGATGACATGG+AGG + chr8_1:19175580-19175599 Msa1183770:intron 50.0%
!! AGGCATTGATGACATGGAGG+TGG + chr8_1:19175583-19175602 Msa1183770:intron 50.0%
! CATTGATGACATGGAGGTGG+AGG + chr8_1:19175586-19175605 Msa1183770:intron 50.0%
! AATGGAGGGAACTGGACTAG+GGG + chr8_1:19175615-19175634 Msa1183770:intron 50.0%
! TTCTTGTAGTGGGACACTGC+CGG + chr8_1:19176321-19176340 Msa1183770:intron 50.0%
CTGAGCCTACTTCAAAGGCA+TGG - chr8_1:19176963-19176982 None:intergenic 50.0%
TGTTAGACCATCCCCAATGG+GGG + chr8_1:19177025-19177044 Msa1183770:intron 50.0%
! AATTTGAGACCCCCCCATTG+GGG - chr8_1:19177039-19177058 None:intergenic 50.0%
GGGTACACCTAATAGGTACC+AGG - chr8_1:19177069-19177088 None:intergenic 50.0%
! CCAATGGGGGTACACCTAAT+AGG - chr8_1:19177076-19177095 None:intergenic 50.0%
CCTATTAGGTGTACCCCCAT+TGG + chr8_1:19177073-19177092 Msa1183770:intron 50.0%
GGGGGTCTTAAGTGAGACTT+GGG - chr8_1:19177127-19177146 None:intergenic 50.0%
TGGGGGTCTTAAGTGAGACT+TGG - chr8_1:19177128-19177147 None:intergenic 50.0%
CATGCAGTCAGGGACATTGA+CGG + chr8_1:19177374-19177393 Msa1183770:intron 50.0%
ACCGTCTAATCTCGGTCCAA+CGG + chr8_1:19177479-19177498 Msa1183770:intron 50.0%
TGGAGGCCTTGCATTGTTTG+CGG - chr8_1:19177633-19177652 None:intergenic 50.0%
CCTCTAATCTGCACTGTTGG+AGG - chr8_1:19177650-19177669 None:intergenic 50.0%
CCTCCAACAGTGCAGATTAG+AGG + chr8_1:19177647-19177666 Msa1183770:five_prime_UTR 50.0%
GCATAATCCACCGTGTGGTT+TGG + chr8_1:19177789-19177808 Msa1183770:five_prime_UTR 50.0%
! GGATTTGACGGTTTTCGGAC+GGG - chr8_1:19178523-19178542 None:intergenic 50.0%
! CGGATTTGACGGTTTTCGGA+CGG - chr8_1:19178524-19178543 None:intergenic 50.0%
CCGAAAATCTATGATGCGGG+TGG + chr8_1:19178546-19178565 Msa1183770:five_prime_UTR 50.0%
! ATGATGCGGGTGGGTTCAAT+CGG + chr8_1:19178556-19178575 Msa1183770:five_prime_UTR 50.0%
! TGGGTTTTCACGGTCGAGTT+CGG + chr8_1:19178615-19178634 Msa1183770:five_prime_UTR 50.0%
TCATTGTTTCGGTCGGTCAC+GGG - chr8_1:19178665-19178684 None:intergenic 50.0%
CAACCGTCGTAGAACGAATG+AGG - chr8_1:19179018-19179037 None:intergenic 50.0%
ACGGCTCAATTAGATCAGGC+AGG + chr8_1:19179535-19179554 Msa1183770:CDS 50.0%
CCAGTTCTTGTGTCAGACCT+AGG - chr8_1:19179621-19179640 None:intergenic 50.0%
CCTAGGTCTGACACAAGAAC+TGG + chr8_1:19179618-19179637 Msa1183770:CDS 50.0%
CAGCTTATGAGTGCACATGC+TGG + chr8_1:19179834-19179853 Msa1183770:CDS 50.0%
CTTATGAGTGCACATGCTGG+AGG + chr8_1:19179837-19179856 Msa1183770:CDS 50.0%
TGATGCCAGATACCCGACAT+GGG + chr8_1:19180324-19180343 Msa1183770:CDS 50.0%
CATAACCCATGTCGGGTATC+TGG - chr8_1:19180332-19180351 None:intergenic 50.0%
CCATGTGCATAACCCATGTC+GGG - chr8_1:19180339-19180358 None:intergenic 50.0%
GCCATGTGCATAACCCATGT+CGG - chr8_1:19180340-19180359 None:intergenic 50.0%
GTTGAGTACTTCGCATGCCA+AGG - chr8_1:19180589-19180608 None:intergenic 50.0%
!! GATTCTAAGGCAACTCGCAG+AGG + chr8_1:19180778-19180797 Msa1183770:CDS 50.0%
TTGCACGAGCTGGTCCAAAA+TGG + chr8_1:19181226-19181245 Msa1183770:CDS 50.0%
!! GAGATGGGTTATCAAGGCGT+AGG + chr8_1:19181374-19181393 Msa1183770:CDS 50.0%
! ATGGGTTATCAAGGCGTAGG+AGG + chr8_1:19181377-19181396 Msa1183770:CDS 50.0%
TGGGTTATCAAGGCGTAGGA+GGG + chr8_1:19181378-19181397 Msa1183770:CDS 50.0%
GGCGTAGGAGGGAAAAAAGT+TGG + chr8_1:19181389-19181408 Msa1183770:CDS 50.0%
! CTCGATGACGGTGTTTCAGT+TGG - chr8_1:19181445-19181464 None:intergenic 50.0%
CCAGTTTCCACGTGTACCAC+CGG + chr8_1:19173853-19173872 Msa1183770:five_prime_UTR 55.0%
GGAGGAAGAGTGATCGGATC+CGG - chr8_1:19173875-19173894 None:intergenic 55.0%
ACGGAGAAGGTGAAGTGTGG+AGG - chr8_1:19173893-19173912 None:intergenic 55.0%
CCGCACATTGGACGCTAATC+AGG - chr8_1:19175387-19175406 None:intergenic 55.0%
! TCTTGTAGTGGGACACTGCC+GGG + chr8_1:19176322-19176341 Msa1183770:intron 55.0%
CTGCCGGGCAAGAACGATTT+AGG + chr8_1:19176337-19176356 Msa1183770:five_prime_UTR 55.0%
TGCCCCACGATAGTAGCTAC+TGG - chr8_1:19176370-19176389 None:intergenic 55.0%
AGCTACTATCGTGGGGCACA+TGG + chr8_1:19176372-19176391 Msa1183770:five_prime_UTR 55.0%
!! GGAAGGAGCATTCATGGCCA+TGG + chr8_1:19176846-19176865 Msa1183770:five_prime_UTR 55.0%
! ATCCTTGATGGCAGCAGCCA+TGG - chr8_1:19176866-19176885 None:intergenic 55.0%
TGGCTGCTGCCATCAAGGAT+AGG + chr8_1:19176866-19176885 Msa1183770:five_prime_UTR 55.0%
GTTAGACCATCCCCAATGGG+GGG + chr8_1:19177026-19177045 Msa1183770:intron 55.0%
TTAGACCATCCCCAATGGGG+GGG + chr8_1:19177027-19177046 Msa1183770:intron 55.0%
TGTACCCCCATTGGGGAGAA+AGG + chr8_1:19177082-19177101 Msa1183770:intron 55.0%
GCCGTTGGACCGAGATTAGA+CGG - chr8_1:19177483-19177502 None:intergenic 55.0%
CATGCAGACAGAGATGTCGG+TGG - chr8_1:19177505-19177524 None:intergenic 55.0%
GGCCTTGCATTGTTTGCGGA+TGG - chr8_1:19177629-19177648 None:intergenic 55.0%
CCAATTCCCAAACCACACGG+TGG - chr8_1:19177799-19177818 None:intergenic 55.0%
! CCACCGTGTGGTTTGGGAAT+TGG + chr8_1:19177796-19177815 Msa1183770:five_prime_UTR 55.0%
! GGGTGGGTTCAATCGGTTGT+CGG + chr8_1:19178563-19178582 Msa1183770:five_prime_UTR 55.0%
! GGTGGGTTCAATCGGTTGTC+GGG + chr8_1:19178564-19178583 Msa1183770:five_prime_UTR 55.0%
TTTCGGTCGGTCACGGGTTT+GGG - chr8_1:19178659-19178678 None:intergenic 55.0%
GTGATGCCAGATACCCGACA+TGG + chr8_1:19180323-19180342 Msa1183770:CDS 55.0%
! CCCGACATGGGTTATGCACA+TGG + chr8_1:19180336-19180355 Msa1183770:CDS 55.0%
! GCTTTTGTCGGTGTGGAAGG+AGG + chr8_1:19180908-19180927 Msa1183770:CDS 55.0%
TTGTCGGTGTGGAAGGAGGT+TGG + chr8_1:19180912-19180931 Msa1183770:CDS 55.0%
GGACTGCGGAACATCTCGTT+TGG + chr8_1:19181583-19181602 Msa1183770:CDS 55.0%
CCGGTGGTACACGTGGAAAC+TGG - chr8_1:19173856-19173875 None:intergenic 60.0%
ATCGGATCCGGTGGTACACG+TGG - chr8_1:19173863-19173882 None:intergenic 60.0%
GGAAGAGTGATCGGATCCGG+TGG - chr8_1:19173872-19173891 None:intergenic 60.0%
! GAGGGAACTGGACTAGGGGA+GGG + chr8_1:19175619-19175638 Msa1183770:intron 60.0%
! AGGGAACTGGACTAGGGGAG+GGG + chr8_1:19175620-19175639 Msa1183770:intron 60.0%
TCAGGGACATTGACGGCCGT+TGG + chr8_1:19177381-19177400 Msa1183770:intron 60.0%
ACAGAGATGTCGGTGGCCGT+TGG - chr8_1:19177498-19177517 None:intergenic 60.0%
! GACGGTTTTCGGACGGGTCT+CGG - chr8_1:19178517-19178536 None:intergenic 60.0%
GTTTCGGTCGGTCACGGGTT+TGG - chr8_1:19178660-19178679 None:intergenic 60.0%
! GGAGGGAACTGGACTAGGGG+AGG + chr8_1:19175618-19175637 Msa1183770:intron 65.0%
! GGGAACTGGACTAGGGGAGG+GGG + chr8_1:19175621-19175640 Msa1183770:intron 65.0%
GGCCATGGCTGCTGCCATCA+AGG + chr8_1:19176861-19176880 Msa1183770:five_prime_UTR 65.0%
TGAGACCCCCCCATTGGGGA+TGG - chr8_1:19177035-19177054 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19173688 19182097 19173688 ID=Msa1183770;Name=Msa1183770
chr8_1 mRNA 19173688 19182097 19173688 ID=Msa1183770-mRNA-1;Parent=Msa1183770;Name=Msa1183770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=2212|1|1|1|0.8|0.90|11|278|749
chr8_1 exon 19173688 19173927 19173688 ID=Msa1183770-mRNA-1:exon:7368;Parent=Msa1183770-mRNA-1
chr8_1 exon 19175081 19175153 19175081 ID=Msa1183770-mRNA-1:exon:7369;Parent=Msa1183770-mRNA-1
chr8_1 exon 19176040 19176087 19176040 ID=Msa1183770-mRNA-1:exon:7370;Parent=Msa1183770-mRNA-1
chr8_1 exon 19176179 19176226 19176179 ID=Msa1183770-mRNA-1:exon:7371;Parent=Msa1183770-mRNA-1
chr8_1 exon 19176330 19176401 19176330 ID=Msa1183770-mRNA-1:exon:7372;Parent=Msa1183770-mRNA-1
chr8_1 exon 19176491 19176646 19176491 ID=Msa1183770-mRNA-1:exon:7373;Parent=Msa1183770-mRNA-1
chr8_1 exon 19176784 19176887 19176784 ID=Msa1183770-mRNA-1:exon:7374;Parent=Msa1183770-mRNA-1
chr8_1 exon 19177613 19179071 19177613 ID=Msa1183770-mRNA-1:exon:7375;Parent=Msa1183770-mRNA-1
chr8_1 exon 19179393 19181477 19179393 ID=Msa1183770-mRNA-1:exon:7376;Parent=Msa1183770-mRNA-1
chr8_1 exon 19181560 19181706 19181560 ID=Msa1183770-mRNA-1:exon:7377;Parent=Msa1183770-mRNA-1
chr8_1 exon 19181790 19182097 19181790 ID=Msa1183770-mRNA-1:exon:7378;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19173688 19173927 19173688 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19175081 19175153 19175081 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19176040 19176087 19176040 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19176179 19176226 19176179 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19176330 19176401 19176330 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19176491 19176646 19176491 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19176784 19176887 19176784 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19177613 19179071 19177613 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 five_prime_UTR 19179393 19179404 19179393 ID=Msa1183770-mRNA-1:five_prime_utr;Parent=Msa1183770-mRNA-1
chr8_1 CDS 19179405 19181477 19179405 ID=Msa1183770-mRNA-1:cds;Parent=Msa1183770-mRNA-1
chr8_1 CDS 19181560 19181706 19181560 ID=Msa1183770-mRNA-1:cds;Parent=Msa1183770-mRNA-1
chr8_1 CDS 19181790 19181819 19181790 ID=Msa1183770-mRNA-1:cds;Parent=Msa1183770-mRNA-1
chr8_1 three_prime_UTR 19181820 19182097 19181820 ID=Msa1183770-mRNA-1:three_prime_utr;Parent=Msa1183770-mRNA-1
Gene Sequence

>Msa1183770

ATGACAATCAATAATACACCCACTGTTGGTATGGAATTTGACAGTGTAGATGAAGCTTGGGAATTTTGGCTTGGTTATGGAAAAGAAATTGGTTTTGGAGTCAGAAAACAGTACTTTAACAGAAAGAAAGACGGCTCAATTAGATCAGGCAGGTTTGTTTGTAGTAAGGAGGGTCATCGACCACCAGATAAAAGGTCATATTCAGTTAAGAACCCTAGGTCTGACACAAGAACTGGTTGTGAAGCAAGAATTGCACTTAGTGTAAAGAATGGGAAATTTGTGATCACAGAGTTCAAAGGAGAACATAACCACCTTTTACAACTTCCTGAAACAACACACATGTTAGCATCTCACCGTAAAATATCTGAAGTCCAAGCACATGAGATTGAAATGGCAGAAGACTCCGGTTTGATGCAAAAATCTTCATTTCAGCTTATGAGTGCACATGCTGGAGGAAGAACTAATCTTGGATATACACCATTGGATGCTAGAAACTACCTCCAAGCAAGAAGACAACGAAGCATGAAGTATGGAGAAATTGGTTGTCTCATGGAGTATTTTCAAACTCAATCATTGGAGAATCCTTCATTTTACCATGCATATCAAATGGATTGCGATGAACTAGTCACAAACGTGTTTTGGGCTGATGCAAAAATGATCTTAGACTATGGTTATTTTGGTGAGGTAGTTTCTTTGGATACGACATATTGCACCAATCGTGCTAATCGACCATTGGCATTGTTTTCAGGCTTCAACCACTATAGGGGCACAGTCATTTTTGGAGCATCCCTTTTGTATGATGAAACAGCTGAGTCATTCAAATGGTTGTTCAAAACTTTTCTTGAAGCACATGGAAACAAAAAGCCACGAACTTTGTTCACTGATCAAGACCAATCAATGGCTAAAGCACTAGCTGAGGTGATGCCAGATACCCGACATGGGTTATGCACATGGCACTTAATGCAGAATGGGATTAAACATCTTGGTTACTTAATGAAAAAAGATCATCATTTCTTGACTTATTTTAAGAAGTGTATGTATGATTATGAACAAGAAGCAATGTTTGAAGAAGCTTGGAGCAAATTGATTGTCGAATTTGATGTTCATGACAAGAAGTGGGTGAAATCAATGTATGCTATCAAGGAAAAATGGGCAGCATGTTACATGAAGGAAGCATTCACCCTTGGCATGCGAAGTACTCAACTTAGCGAGAGCTTAAATTCAAGTTTCAAGGCATGCATGAAACCAGGAATTAATATCGTCCAATTCTTCAAACACTTCGAGAGAGTTGTTGCGGAGAAAAGGTATAACGAGTCAAGATGTGACTATGAGTCAAGACATAAACTACCAAGGATAAAATATGGGCATTCACCGATTCTAAGGCAACTCGCAGAGGTATACACTCATACAGTTTTTGACTTATTCCATCATGAGTTTGATTTATTTTTAGCTGCTAACATAAGACAACGAAATGAATCCCAATATCCATTTGAATATGTTATTGCTTTTGTCGGTGTGGAAGGAGGTTGGAAAGTACTATTTGATCCTGTACAGTCCTCCATATCATGTAGTTGTAGAAAGTTTGAGACTTTTGGAATGCTTTGTTGCCATGCTTTGAAGGTTTTTGAGGCAAATGATGTTAAAATTGTCCCTGATCAATACATTTTGAAAAGGTGGACAAAAAATGCACGAAGTGGTATTATCTTTGATTTTAGGGGAAATGAGGTTGTGGAAGATCCCAAACTATCTAGTATACAACGATACAAGCAACTTTGCTCTATTATGGTTAGATTAGCAGCTGATGTGTCTCCTTTCGAAGATTTGCACGAGCTGGTCCAAAATGGATTGCATGACCTGTGTAATAAAGTAAAGGAGGTTCGATTACAGAAAAAAGTCAATGCTCATGATGAAGGTGAAGTCCCAACAATAACTGCTGAAAATGTTACTCAACCAAGGGGATTTAAGAACCGAGATGGGTTATCAAGGCGTAGGAGGGAAAAAAGTTGGATTGAAAAGCAGCCTAAAGCAAAAAAAGCTCCAACTGAAACACCGTCATCGAGTCAAAGATCTCAGGATGTTGCATCTATAAGTCAGATGGACTGCGGAACATCTCGTTTGGTACATCCTTATGAGTATCAAACAATTGGGAACAGTTTGGCACTTCCTTATGAGTTATCTCAAACAAATGGAAATCAATTTAGTTTTACTAGATTATTGATGGAGTCACATAATCAGAATGAAGGTCAATGA
Protein sequence

>Msa1183770

MTINNTPTVGMEFDSVDEAWEFWLGYGKEIGFGVRKQYFNRKKDGSIRSGRFVCSKEGHRPPDKRSYSVKNPRSDTRTGCEARIALSVKNGKFVITEFKGEHNHLLQLPETTHMLASHRKISEVQAHEIEMAEDSGLMQKSSFQLMSAHAGGRTNLGYTPLDARNYLQARRQRSMKYGEIGCLMEYFQTQSLENPSFYHAYQMDCDELVTNVFWADAKMILDYGYFGEVVSLDTTYCTNRANRPLALFSGFNHYRGTVIFGASLLYDETAESFKWLFKTFLEAHGNKKPRTLFTDQDQSMAKALAEVMPDTRHGLCTWHLMQNGIKHLGYLMKKDHHFLTYFKKCMYDYEQEAMFEEAWSKLIVEFDVHDKKWVKSMYAIKEKWAACYMKEAFTLGMRSTQLSESLNSSFKACMKPGINIVQFFKHFERVVAEKRYNESRCDYESRHKLPRIKYGHSPILRQLAEVYTHTVFDLFHHEFDLFLAANIRQRNESQYPFEYVIAFVGVEGGWKVLFDPVQSSISCSCRKFETFGMLCCHALKVFEANDVKIVPDQYILKRWTKNARSGIIFDFRGNEVVEDPKLSSIQRYKQLCSIMVRLAADVSPFEDLHELVQNGLHDLCNKVKEVRLQKKVNAHDEGEVPTITAENVTQPRGFKNRDGLSRRRREKSWIEKQPKAKKAPTETPSSSQRSQDVASISQMDCGTSRLVHPYEYQTIGNSLALPYELSQTNGNQFSFTRLLMESHNQNEGQ*