Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617260 | XP_013446508.1 | 87.795 | 254 | 1 | 1 | 1 | 224 | 1 | 254 | 4.01e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617260 | sp|Q9M022|AIRP2_ARATH | 41.810 | 232 | 98 | 4 | 7 | 208 | 2 | 226 | 7.92e-53 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617260 | A0A072U3W9 | 87.795 | 254 | 1 | 1 | 1 | 224 | 1 | 254 | 1.92e-158 | 447 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000590 | Msa0617260 | 0.813202 | 2.883446e-51 | -8.615850e-47 |
| Msa0006880 | Msa0617260 | 0.808771 | 2.628905e-50 | -8.615850e-47 |
| Msa0008840 | Msa0617260 | 0.817157 | 3.814884e-52 | -8.615850e-47 |
| Msa0014830 | Msa0617260 | 0.823658 | 1.230410e-53 | -8.615850e-47 |
| Msa0017320 | Msa0617260 | 0.800936 | 1.140516e-48 | -8.615850e-47 |
| Msa0038870 | Msa0617260 | 0.814706 | 1.344227e-51 | -8.615850e-47 |
| Msa0047250 | Msa0617260 | 0.826441 | 2.707942e-54 | -8.615850e-47 |
| Msa0055100 | Msa0617260 | 0.807527 | 4.838844e-50 | -8.615850e-47 |
| Msa0057750 | Msa0617260 | 0.808742 | 2.667484e-50 | -8.615850e-47 |
| Msa0059890 | Msa0617260 | 0.806877 | 6.645750e-50 | -8.615850e-47 |
| Msa0072170 | Msa0617260 | 0.827292 | 1.695721e-54 | -8.615850e-47 |
| Msa0074750 | Msa0617260 | 0.868271 | 7.390855e-66 | -8.615850e-47 |
| Msa0084430 | Msa0617260 | 0.807766 | 4.305815e-50 | -8.615850e-47 |
| Msa0090030 | Msa0617260 | 0.831821 | 1.343140e-55 | -8.615850e-47 |
| Msa0101180 | Msa0617260 | 0.809709 | 1.655076e-50 | -8.615850e-47 |
| Msa0103070 | Msa0617260 | 0.809310 | 2.015988e-50 | -8.615850e-47 |
| Msa0115370 | Msa0617260 | 0.805412 | 1.351719e-49 | -8.615850e-47 |
| Msa0115460 | Msa0617260 | 0.805787 | 1.127642e-49 | -8.615850e-47 |
| Msa0120540 | Msa0617260 | 0.814110 | 1.820481e-51 | -8.615850e-47 |
| Msa0606810 | Msa0617260 | 0.805531 | 1.276074e-49 | -8.615850e-47 |
| Msa0609220 | Msa0617260 | 0.804793 | 1.821434e-49 | -8.615850e-47 |
| Msa0609970 | Msa0617260 | 0.818046 | 2.404809e-52 | -8.615850e-47 |
| Msa0617260 | Msa0617450 | 0.802985 | 4.325858e-49 | -8.615850e-47 |
| Msa0617260 | Msa0618200 | -0.806584 | 7.662804e-50 | -8.615850e-47 |
| Msa0617260 | Msa0620330 | 0.840603 | 7.871129e-58 | -8.615850e-47 |
| Msa0617260 | Msa0621600 | 0.803617 | 3.199986e-49 | -8.615850e-47 |
| Msa0617260 | Msa0621650 | 0.823038 | 1.717247e-53 | -8.615850e-47 |
| Msa0617260 | Msa0625790 | 0.809316 | 2.009357e-50 | -8.615850e-47 |
| Msa0617260 | Msa0626940 | 0.800261 | 1.566026e-48 | -8.615850e-47 |
| Msa0617260 | Msa0628290 | 0.833002 | 6.847777e-56 | -8.615850e-47 |
| Msa0617260 | Msa0630950 | 0.850125 | 2.077786e-60 | -8.615850e-47 |
| Msa0617260 | Msa0653320 | -0.803138 | 4.021871e-49 | -8.615850e-47 |
| Msa0617260 | Msa0661090 | 0.821522 | 3.861595e-53 | -8.615850e-47 |
| Msa0617260 | Msa0662630 | 0.818217 | 2.198987e-52 | -8.615850e-47 |
| Msa0617260 | Msa0663900 | 0.807285 | 5.447660e-50 | -8.615850e-47 |
| Msa0617260 | Msa0669190 | 0.832627 | 8.483665e-56 | -8.615850e-47 |
| Msa0617260 | Msa0673470 | 0.821220 | 4.532870e-53 | -8.615850e-47 |
| Msa0617260 | Msa0679550 | 0.821283 | 4.383805e-53 | -8.615850e-47 |
| Msa0617260 | Msa0687230 | 0.851193 | 1.040564e-60 | -8.615850e-47 |
| Msa0617260 | Msa0692110 | 0.808517 | 2.979729e-50 | -8.615850e-47 |
| Msa0617260 | Msa0693790 | 0.838082 | 3.552318e-57 | -8.615850e-47 |
| Msa0617260 | Msa0697720 | 0.807971 | 3.894038e-50 | -8.615850e-47 |
| Msa0617260 | Msa0708770 | 0.824896 | 6.296119e-54 | -8.615850e-47 |
| Msa0617260 | Msa0713460 | 0.839574 | 1.460464e-57 | -8.615850e-47 |
| Msa0617260 | Msa0715150 | 0.808635 | 2.810828e-50 | -8.615850e-47 |
| Msa0617260 | Msa0726080 | 0.828389 | 9.238192e-55 | -8.615850e-47 |
| Msa0617260 | Msa0732600 | 0.804167 | 2.459583e-49 | -8.615850e-47 |
| Msa0617260 | Msa0743530 | 0.849164 | 3.853504e-60 | -8.615850e-47 |
| Msa0617260 | Msa0750330 | -0.829507 | 4.953246e-55 | -8.615850e-47 |
| Msa0617260 | Msa0750540 | 0.807537 | 4.816037e-50 | -8.615850e-47 |
| Msa0617260 | Msa0756930 | 0.814773 | 1.298808e-51 | -8.615850e-47 |
| Msa0617260 | Msa0766670 | 0.831516 | 1.597018e-55 | -8.615850e-47 |
| Msa0617260 | Msa0776750 | 0.830951 | 2.199205e-55 | -8.615850e-47 |
| Msa0617260 | Msa0787150 | 0.801227 | 9.943472e-49 | -8.615850e-47 |
| Msa0617260 | Msa0789560 | 0.810175 | 1.313241e-50 | -8.615850e-47 |
| Msa0617260 | Msa0797750 | 0.804229 | 2.388211e-49 | -8.615850e-47 |
| Msa0617260 | Msa0805420 | 0.800426 | 1.449547e-48 | -8.615850e-47 |
| Msa0617260 | Msa0811040 | 0.802853 | 4.607256e-49 | -8.615850e-47 |
| Msa0617260 | Msa0814250 | 0.803598 | 3.229859e-49 | -8.615850e-47 |
| Msa0617260 | Msa0820200 | 0.800619 | 1.324137e-48 | -8.615850e-47 |
| Msa0617260 | Msa0820530 | -0.842955 | 1.885146e-58 | -8.615850e-47 |
| Msa0617260 | Msa0822170 | 0.832032 | 1.191317e-55 | -8.615850e-47 |
| Msa0617260 | Msa0830210 | 0.820732 | 5.871148e-53 | -8.615850e-47 |
| Msa0617260 | Msa0836500 | 0.801044 | 1.083974e-48 | -8.615850e-47 |
| Msa0617260 | Msa0846230 | 0.827941 | 1.184322e-54 | -8.615850e-47 |
| Msa0617260 | Msa0858440 | 0.808214 | 3.456546e-50 | -8.615850e-47 |
| Msa0617260 | Msa0866400 | 0.807807 | 4.220389e-50 | -8.615850e-47 |
| Msa0617260 | Msa0877710 | 0.814639 | 1.390322e-51 | -8.615850e-47 |
| Msa0617260 | Msa0879860 | 0.805390 | 1.366175e-49 | -8.615850e-47 |
| Msa0617260 | Msa0891600 | -0.805509 | 1.289888e-49 | -8.615850e-47 |
| Msa0617260 | Msa0898660 | 0.809256 | 2.070238e-50 | -8.615850e-47 |
| Msa0617260 | Msa0908170 | 0.809019 | 2.326630e-50 | -8.615850e-47 |
| Msa0617260 | Msa0919470 | 0.809952 | 1.466948e-50 | -8.615850e-47 |
| Msa0617260 | Msa0921870 | 0.819488 | 1.131165e-52 | -8.615850e-47 |
| Msa0617260 | Msa0924150 | -0.834099 | 3.645847e-56 | -8.615850e-47 |
| Msa0617260 | Msa0930140 | 0.809255 | 2.070882e-50 | -8.615850e-47 |
| Msa0617260 | Msa0957450 | -0.805731 | 1.158859e-49 | -8.615850e-47 |
| Msa0617260 | Msa0959010 | 0.809841 | 1.550168e-50 | -8.615850e-47 |
| Msa0617260 | Msa0998590 | 0.820656 | 6.112696e-53 | -8.615850e-47 |
| Msa0617260 | Msa1010460 | 0.871665 | 5.749152e-67 | -8.615850e-47 |
| Msa0617260 | Msa1025940 | 0.815025 | 1.141788e-51 | -8.615850e-47 |
| Msa0617260 | Msa1033970 | 0.819127 | 1.367031e-52 | -8.615850e-47 |
| Msa0617260 | Msa1036740 | 0.839654 | 1.392174e-57 | -8.615850e-47 |
| Msa0617260 | Msa1045450 | 0.816830 | 4.517401e-52 | -8.615850e-47 |
| Msa0617260 | Msa1071320 | 0.802301 | 5.988036e-49 | -8.615850e-47 |
| Msa0617260 | Msa1071660 | 0.806958 | 6.386639e-50 | -8.615850e-47 |
| Msa0617260 | Msa1073400 | 0.807965 | 3.906071e-50 | -8.615850e-47 |
| Msa0617260 | Msa1073830 | 0.818007 | 2.454175e-52 | -8.615850e-47 |
| Msa0617260 | Msa1077070 | 0.822272 | 2.588920e-53 | -8.615850e-47 |
| Msa0617260 | Msa1096550 | 0.857003 | 2.193552e-62 | -8.615850e-47 |
| Msa0617260 | Msa1113590 | 0.835634 | 1.496760e-56 | -8.615850e-47 |
| Msa0617260 | Msa1113880 | 0.818178 | 2.244779e-52 | -8.615850e-47 |
| Msa0617260 | Msa1122780 | 0.838077 | 3.562938e-57 | -8.615850e-47 |
| Msa0617260 | Msa1127430 | 0.820417 | 6.936944e-53 | -8.615850e-47 |
| Msa0617260 | Msa1128330 | 0.816412 | 5.604121e-52 | -8.615850e-47 |
| Msa0617260 | Msa1130530 | 0.807526 | 4.841823e-50 | -8.615850e-47 |
| Msa0617260 | Msa1144970 | 0.838834 | 2.272625e-57 | -8.615850e-47 |
| Msa0617260 | Msa1158770 | 0.812822 | 3.494812e-51 | -8.615850e-47 |
| Msa0617260 | Msa1160360 | 0.825176 | 5.406210e-54 | -8.615850e-47 |
| Msa0617260 | Msa1163870 | 0.833757 | 4.438200e-56 | -8.615850e-47 |
| Msa0617260 | Msa1164020 | 0.805870 | 1.083407e-49 | -8.615850e-47 |
| Msa0617260 | Msa1174310 | 0.838851 | 2.249726e-57 | -8.615850e-47 |
| Msa0617260 | Msa1174850 | 0.803478 | 3.419858e-49 | -8.615850e-47 |
| Msa0617260 | Msa1176360 | 0.812488 | 4.134314e-51 | -8.615850e-47 |
| Msa0617260 | Msa1176980 | 0.821854 | 3.236167e-53 | -8.615850e-47 |
| Msa0617260 | Msa1178050 | 0.808064 | 3.720864e-50 | -8.615850e-47 |
| Msa0617260 | Msa1183770 | 0.817564 | 3.089028e-52 | -8.615850e-47 |
| Msa0617260 | Msa1188560 | 0.834364 | 3.128406e-56 | -8.615850e-47 |
| Msa0617260 | Msa1192850 | 0.802926 | 4.449054e-49 | -8.615850e-47 |
| Msa0617260 | Msa1199710 | 0.809408 | 1.920739e-50 | -8.615850e-47 |
| Msa0617260 | Msa1200320 | 0.802023 | 6.827904e-49 | -8.615850e-47 |
| Msa0617260 | Msa1205480 | 0.835000 | 2.164535e-56 | -8.615850e-47 |
| Msa0617260 | Msa1205590 | 0.816843 | 4.487236e-52 | -8.615850e-47 |
| Msa0617260 | Msa1206650 | 0.813357 | 2.666202e-51 | -8.615850e-47 |
| Msa0617260 | Msa1207730 | 0.813813 | 2.116754e-51 | -8.615850e-47 |
| Msa0617260 | Msa1211350 | 0.814636 | 1.392555e-51 | -8.615850e-47 |
| Msa0617260 | Msa1233850 | 0.810122 | 1.348247e-50 | -8.615850e-47 |
| Msa0617260 | Msa1236390 | 0.806265 | 8.945982e-50 | -8.615850e-47 |
| Msa0617260 | Msa1256470 | 0.810608 | 1.059231e-50 | -8.615850e-47 |
| Msa0617260 | Msa1266020 | 0.820153 | 7.972672e-53 | -8.615850e-47 |
| Msa0617260 | Msa1267840 | 0.819278 | 1.263075e-52 | -8.615850e-47 |
| Msa0617260 | Msa1296300 | 0.854779 | 9.803359e-62 | -8.615850e-47 |
| Msa0617260 | Msa1297530 | 0.803335 | 3.662333e-49 | -8.615850e-47 |
| Msa0617260 | Msa1314770 | 0.813520 | 2.455730e-51 | -8.615850e-47 |
| Msa0617260 | Msa1320820 | 0.810501 | 1.117171e-50 | -8.615850e-47 |
| Msa0617260 | Msa1329800 | 0.827731 | 1.330580e-54 | -8.615850e-47 |
| Msa0617260 | Msa1331280 | 0.810387 | 1.182265e-50 | -8.615850e-47 |
| Msa0617260 | Msa1336040 | 0.813990 | 1.934565e-51 | -8.615850e-47 |
| Msa0617260 | Msa1339190 | 0.822495 | 2.297900e-53 | -8.615850e-47 |
| Msa0617260 | Msa1340830 | 0.806745 | 7.087292e-50 | -8.615850e-47 |
| Msa0617260 | Msa1341490 | 0.808896 | 2.472658e-50 | -8.615850e-47 |
| Msa0617260 | Msa1344310 | 0.820172 | 7.894417e-53 | -8.615850e-47 |
| Msa0617260 | Msa1344850 | 0.802274 | 6.064588e-49 | -8.615850e-47 |
| Msa0617260 | Msa1350690 | 0.808356 | 3.224961e-50 | -8.615850e-47 |
| Msa0617260 | Msa1363700 | 0.823743 | 1.174883e-53 | -8.615850e-47 |
| Msa0617260 | Msa1371090 | 0.805107 | 1.566216e-49 | -8.615850e-47 |
| Msa0617260 | Msa1371240 | 0.800657 | 1.300465e-48 | -8.615850e-47 |
| Msa0617260 | Msa1372290 | 0.817790 | 2.746829e-52 | -8.615850e-47 |
| Msa0617260 | Msa1372310 | 0.809029 | 2.315215e-50 | -8.615850e-47 |
| Msa0617260 | Msa1385350 | 0.823658 | 1.230630e-53 | -8.615850e-47 |
| Msa0617260 | Msa1393800 | 0.849408 | 3.296136e-60 | -8.615850e-47 |
| Msa0617260 | Msa1396940 | 0.835723 | 1.421405e-56 | -8.615850e-47 |
| Msa0617260 | Msa1416260 | 0.823629 | 1.249772e-53 | -8.615850e-47 |
| Msa0617260 | Msa1422840 | 0.830311 | 3.153682e-55 | -8.615850e-47 |
| Msa0617260 | Msa1423910 | 0.803829 | 2.892186e-49 | -8.615850e-47 |
| Msa0617260 | Msa1426910 | 0.815643 | 8.321282e-52 | -8.615850e-47 |
| Msa0617260 | Msa1442790 | 0.809086 | 2.251411e-50 | -8.615850e-47 |
| Msa0617260 | Msa1444120 | 0.804655 | 1.946288e-49 | -8.615850e-47 |
| Msa0617260 | Msa1445940 | 0.808177 | 3.519687e-50 | -8.615850e-47 |
| Msa0617260 | Msa1448630 | 0.800940 | 1.138626e-48 | -8.615850e-47 |
| Msa0617260 | Msa1458030 | 0.859145 | 5.063978e-63 | -8.615850e-47 |
| Msa0617260 | Msa1463600 | 0.833275 | 5.857171e-56 | -8.615850e-47 |
| Msa0127850 | Msa0617260 | 0.802411 | 5.683130e-49 | -8.615850e-47 |
| Msa0136120 | Msa0617260 | 0.806893 | 6.592816e-50 | -8.615850e-47 |
| Msa0138210 | Msa0617260 | 0.802085 | 6.631306e-49 | -8.615850e-47 |
| Msa0140400 | Msa0617260 | 0.810055 | 1.394034e-50 | -8.615850e-47 |
| Msa0146080 | Msa0617260 | 0.809177 | 2.152919e-50 | -8.615850e-47 |
| Msa0154920 | Msa0617260 | 0.803428 | 3.502022e-49 | -8.615850e-47 |
| Msa0161070 | Msa0617260 | -0.839342 | 1.678233e-57 | -8.615850e-47 |
| Msa0171980 | Msa0617260 | 0.814711 | 1.340777e-51 | -8.615850e-47 |
| Msa0176330 | Msa0617260 | 0.807117 | 5.910703e-50 | -8.615850e-47 |
| Msa0183460 | Msa0617260 | 0.813412 | 2.593309e-51 | -8.615850e-47 |
| Msa0183870 | Msa0617260 | 0.815179 | 1.055432e-51 | -8.615850e-47 |
| Msa0193600 | Msa0617260 | 0.811459 | 6.928809e-51 | -8.615850e-47 |
| Msa0194720 | Msa0617260 | 0.820472 | 6.736799e-53 | -8.615850e-47 |
| Msa0202930 | Msa0617260 | 0.833663 | 4.686079e-56 | -8.615850e-47 |
| Msa0212750 | Msa0617260 | -0.828799 | 7.354173e-55 | -8.615850e-47 |
| Msa0228030 | Msa0617260 | 0.817821 | 2.703127e-52 | -8.615850e-47 |
| Msa0229360 | Msa0617260 | 0.826670 | 2.388514e-54 | -8.615850e-47 |
| Msa0236770 | Msa0617260 | 0.803226 | 3.857577e-49 | -8.615850e-47 |
| Msa0376600 | Msa0617260 | 0.825347 | 4.924738e-54 | -8.615850e-47 |
| Msa0381000 | Msa0617260 | 0.809141 | 2.190705e-50 | -8.615850e-47 |
| Msa0381080 | Msa0617260 | 0.804483 | 2.114461e-49 | -8.615850e-47 |
| Msa0384670 | Msa0617260 | 0.801310 | 9.564334e-49 | -8.615850e-47 |
| Msa0387050 | Msa0617260 | 0.810052 | 1.396339e-50 | -8.615850e-47 |
| Msa0394690 | Msa0617260 | 0.811808 | 5.818344e-51 | -8.615850e-47 |
| Msa0410300 | Msa0617260 | 0.807897 | 4.038494e-50 | -8.615850e-47 |
| Msa0419520 | Msa0617260 | 0.800543 | 1.371954e-48 | -8.615850e-47 |
| Msa0434570 | Msa0617260 | 0.803189 | 3.925310e-49 | -8.615850e-47 |
| Msa0434770 | Msa0617260 | 0.803408 | 3.535856e-49 | -8.615850e-47 |
| Msa0436190 | Msa0617260 | 0.824565 | 7.536112e-54 | -8.615850e-47 |
| Msa0439890 | Msa0617260 | 0.837902 | 3.952116e-57 | -8.615850e-47 |
| Msa0442310 | Msa0617260 | 0.809933 | 1.480669e-50 | -8.615850e-47 |
| Msa0443430 | Msa0617260 | 0.812263 | 4.628320e-51 | -8.615850e-47 |
| Msa0445020 | Msa0617260 | 0.800466 | 1.422702e-48 | -8.615850e-47 |
| Msa0446900 | Msa0617260 | 0.808061 | 3.726990e-50 | -8.615850e-47 |
| Msa0449820 | Msa0617260 | 0.853044 | 3.098766e-61 | -8.615850e-47 |
| Msa0449830 | Msa0617260 | 0.804771 | 1.840897e-49 | -8.615850e-47 |
| Msa0455590 | Msa0617260 | 0.805561 | 1.257731e-49 | -8.615850e-47 |
| Msa0461590 | Msa0617260 | 0.819140 | 1.357977e-52 | -8.615850e-47 |
| Msa0478580 | Msa0617260 | 0.801927 | 7.145552e-49 | -8.615850e-47 |
| Msa0479330 | Msa0617260 | 0.804368 | 2.234022e-49 | -8.615850e-47 |
| Msa0239940 | Msa0617260 | 0.810727 | 9.982961e-51 | -8.615850e-47 |
| Msa0241740 | Msa0617260 | 0.837574 | 4.797998e-57 | -8.615850e-47 |
| Msa0265160 | Msa0617260 | 0.802646 | 5.083503e-49 | -8.615850e-47 |
| Msa0265600 | Msa0617260 | 0.806263 | 8.955859e-50 | -8.615850e-47 |
| Msa0266210 | Msa0617260 | 0.805409 | 1.353881e-49 | -8.615850e-47 |
| Msa0267870 | Msa0617260 | 0.809433 | 1.896980e-50 | -8.615850e-47 |
| Msa0273650 | Msa0617260 | 0.811620 | 6.391814e-51 | -8.615850e-47 |
| Msa0284820 | Msa0617260 | 0.814027 | 1.899010e-51 | -8.615850e-47 |
| Msa0287670 | Msa0617260 | 0.808570 | 2.901969e-50 | -8.615850e-47 |
| Msa0289400 | Msa0617260 | 0.821526 | 3.852556e-53 | -8.615850e-47 |
| Msa0304840 | Msa0617260 | 0.817230 | 3.672573e-52 | -8.615850e-47 |
| Msa0308200 | Msa0617260 | 0.809277 | 2.048470e-50 | -8.615850e-47 |
| Msa0310410 | Msa0617260 | 0.814605 | 1.415087e-51 | -8.615850e-47 |
| Msa0310430 | Msa0617260 | 0.813466 | 2.523995e-51 | -8.615850e-47 |
| Msa0321190 | Msa0617260 | 0.802400 | 5.711380e-49 | -8.615850e-47 |
| Msa0322590 | Msa0617260 | 0.806641 | 7.454595e-50 | -8.615850e-47 |
| Msa0327410 | Msa0617260 | 0.813784 | 2.148364e-51 | -8.615850e-47 |
| Msa0335320 | Msa0617260 | -0.805544 | 1.268490e-49 | -8.615850e-47 |
| Msa0336360 | Msa0617260 | 0.808190 | 3.497365e-50 | -8.615850e-47 |
| Msa0341230 | Msa0617260 | 0.806911 | 6.534457e-50 | -8.615850e-47 |
| Msa0341890 | Msa0617260 | 0.814671 | 1.368001e-51 | -8.615850e-47 |
| Msa0342290 | Msa0617260 | 0.857928 | 1.168485e-62 | -8.615850e-47 |
| Msa0343190 | Msa0617260 | 0.810098 | 1.364351e-50 | -8.615850e-47 |
| Msa0346990 | Msa0617260 | 0.800940 | 1.138491e-48 | -8.615850e-47 |
| Msa0363060 | Msa0617260 | 0.806736 | 7.117750e-50 | -8.615850e-47 |
| Msa0484290 | Msa0617260 | 0.818654 | 1.751084e-52 | -8.615850e-47 |
| Msa0495220 | Msa0617260 | 0.803762 | 2.986889e-49 | -8.615850e-47 |
| Msa0514610 | Msa0617260 | 0.809787 | 1.592312e-50 | -8.615850e-47 |
| Msa0518960 | Msa0617260 | 0.802424 | 5.647932e-49 | -8.615850e-47 |
| Msa0524600 | Msa0617260 | 0.817757 | 2.794885e-52 | -8.615850e-47 |
| Msa0534080 | Msa0617260 | 0.809399 | 1.928994e-50 | -8.615850e-47 |
| Msa0534410 | Msa0617260 | 0.859727 | 3.386543e-63 | -8.615850e-47 |
| Msa0555640 | Msa0617260 | 0.800254 | 1.571395e-48 | -8.615850e-47 |
| Msa0565620 | Msa0617260 | -0.809324 | 2.001872e-50 | -8.615850e-47 |
| Msa0577200 | Msa0617260 | -0.839421 | 1.600486e-57 | -8.615850e-47 |
| Msa0578090 | Msa0617260 | 0.803830 | 2.890197e-49 | -8.615850e-47 |
| Msa0580640 | Msa0617260 | 0.815128 | 1.083675e-51 | -8.615850e-47 |
| Msa0587190 | Msa0617260 | 0.806773 | 6.989671e-50 | -8.615850e-47 |
| Msa0588120 | Msa0617260 | 0.808670 | 2.763741e-50 | -8.615850e-47 |
| Msa0590650 | Msa0617260 | 0.841347 | 5.021960e-58 | -8.615850e-47 |
| Msa0591540 | Msa0617260 | 0.800920 | 1.149373e-48 | -8.615850e-47 |
| Msa0591710 | Msa0617260 | 0.808780 | 2.617038e-50 | -8.615850e-47 |
| Msa0594200 | Msa0617260 | 0.810964 | 8.872682e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617260 | MtrunA17_Chr8g0376861 | 87.795 | 254 | 1 | 1 | 1 | 224 | 1 | 254 | 3.69e-162 | 447 |
| Msa0617260 | MtrunA17_Chr3g0123161 | 69.650 | 257 | 44 | 4 | 1 | 224 | 4 | 259 | 1.68e-118 | 337 |
| Msa0617260 | MtrunA17_Chr4g0047521 | 42.387 | 243 | 103 | 4 | 7 | 219 | 8 | 243 | 1.99e-59 | 187 |
| Msa0617260 | MtrunA17_Chr2g0281861 | 42.276 | 246 | 101 | 5 | 10 | 223 | 14 | 250 | 1.23e-58 | 185 |
| Msa0617260 | MtrunA17_Chr3g0104651 | 40.408 | 245 | 113 | 4 | 3 | 219 | 11 | 250 | 2.67e-54 | 174 |
| Msa0617260 | MtrunA17_Chr4g0006201 | 35.317 | 252 | 127 | 5 | 1 | 221 | 1 | 247 | 1.31e-50 | 164 |
| Msa0617260 | MtrunA17_Chr7g0242261 | 38.528 | 231 | 108 | 5 | 7 | 208 | 22 | 247 | 8.90e-44 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0617260 | AT1G24440.1 | 62.451 | 253 | 64 | 6 | 1 | 224 | 1 | 251 | 2.20e-99 | 289 |
| Msa0617260 | AT1G13195.1 | 55.738 | 244 | 74 | 3 | 10 | 222 | 16 | 256 | 2.20e-92 | 272 |
| Msa0617260 | AT1G24440.2 | 62.727 | 220 | 51 | 6 | 34 | 224 | 2 | 219 | 8.28e-85 | 251 |
| Msa0617260 | AT1G13195.2 | 54.545 | 220 | 66 | 3 | 34 | 222 | 2 | 218 | 5.43e-79 | 236 |
| Msa0617260 | AT5G01520.1 | 41.810 | 232 | 98 | 4 | 7 | 208 | 2 | 226 | 8.05e-54 | 173 |
| Msa0617260 | AT3G47160.1 | 40.586 | 239 | 111 | 6 | 5 | 216 | 1 | 235 | 5.81e-52 | 168 |
| Msa0617260 | AT5G58787.2 | 38.914 | 221 | 122 | 3 | 5 | 216 | 1 | 217 | 2.31e-49 | 161 |
| Msa0617260 | AT5G58787.1 | 39.224 | 232 | 121 | 4 | 5 | 216 | 1 | 232 | 9.12e-49 | 160 |
| Msa0617260 | AT3G47160.2 | 38.645 | 251 | 111 | 7 | 5 | 216 | 1 | 247 | 2.01e-48 | 159 |
| Msa0617260 | AT5G58787.3 | 36.318 | 201 | 115 | 3 | 25 | 216 | 2 | 198 | 1.57e-38 | 133 |
| Msa0617260 | AT3G47160.3 | 39.109 | 202 | 92 | 6 | 42 | 216 | 1 | 198 | 2.73e-37 | 129 |
| Msa0617260 | AT5G01520.2 | 38.983 | 177 | 71 | 4 | 7 | 153 | 2 | 171 | 7.20e-29 | 107 |
Find 66 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTGCTAAGATAGATTTC+TGG | 0.239079 | 4_2:-67697913 | Msa0617260:intron |
| GTATTTAAAGAGAAGGAAAA+AGG | 0.284024 | 4_2:+67700085 | None:intergenic |
| TGAACATGCATGACAGATAA+AGG | 0.287990 | 4_2:+67697735 | None:intergenic |
| AAGCCATACCTGACATGATT+AGG | 0.302127 | 4_2:+67697932 | None:intergenic |
| CTTAGAACCATGCACCAAAA+TGG | 0.305132 | 4_2:-67698559 | Msa0617260:CDS |
| GAGTTAATTCAGAGGATCTA+TGG | 0.305552 | 4_2:-67698179 | Msa0617260:CDS |
| ACGACATTCCTCTTTGCTTT+TGG | 0.314181 | 4_2:-67700275 | Msa0617260:five_prime_UTR |
| ACTAACCACCAATGTTGATT+TGG | 0.315577 | 4_2:-67698607 | Msa0617260:CDS |
| GACTGTAAACCAATTTCATT+TGG | 0.326629 | 4_2:+67699657 | None:intergenic |
| ATGGATGAGGATGAAGAAAA+AGG | 0.334416 | 4_2:+67700180 | None:intergenic |
| TACATTAAGAAAAGTGCATC+TGG | 0.335636 | 4_2:+67698057 | None:intergenic |
| TAACCTTGTATATAATTATA+TGG | 0.344953 | 4_2:+67699552 | None:intergenic |
| CCGTCTCTCCAGCGGCTTCA+TGG | 0.345286 | 4_2:-67698720 | Msa0617260:intron |
| AGTGCATCTGGGTAATCTTT+AGG | 0.345500 | 4_2:+67698069 | None:intergenic |
| GCAGTTAGGCAAAACCATTT+TGG | 0.360825 | 4_2:+67698545 | None:intergenic |
| GAAATTGGTTTACAGTCAAT+TGG | 0.365020 | 4_2:-67699651 | Msa0617260:CDS |
| AGCTTAGACGGTTCAAGTTA+TGG | 0.371619 | 4_2:-67698657 | Msa0617260:CDS |
| CCAGCGGCTTCATGGTAGTT+TGG | 0.377445 | 4_2:-67698712 | Msa0617260:intron |
| TCATGGTAGTTTGGAGAAGT+TGG | 0.404707 | 4_2:-67698703 | Msa0617260:CDS |
| GCATGACAGATAAAGGATAA+TGG | 0.409081 | 4_2:+67697742 | None:intergenic |
| TAGGTAAGCTGTTGATATAA+AGG | 0.419768 | 4_2:+67698088 | None:intergenic |
| AAACTTAGTCAACACTTGTT+CGG | 0.421802 | 4_2:-67700120 | Msa0617260:five_prime_UTR |
| CTTCCATATAATTATATACA+AGG | 0.439322 | 4_2:-67699555 | Msa0617260:intron |
| ACACTCCCACCCTTGCCTCT+TGG | 0.442014 | 4_2:+67699683 | None:intergenic |
| TGATGAGTTAATATGAGAAA+TGG | 0.446833 | 4_2:+67700161 | None:intergenic |
| AGCCATACCTGACATGATTA+GGG | 0.449534 | 4_2:+67697933 | None:intergenic |
| TTTGTTGTTGTTGCAATGGA+TGG | 0.451831 | 4_2:-67699618 | Msa0617260:CDS |
| CTACAGAGGAGATGATATAT+AGG | 0.468100 | 4_2:+67697861 | None:intergenic |
| AAGAAGATGATTGAAGCAAA+TGG | 0.476778 | 4_2:-67698633 | Msa0617260:CDS |
| TTCTCTTTCCAAATCAACAT+TGG | 0.479691 | 4_2:+67698599 | None:intergenic |
| ACAAGTGTTGACTAAGTTTG+TGG | 0.479933 | 4_2:+67700124 | None:intergenic |
| TTCCCTAATCATGTCAGGTA+TGG | 0.482519 | 4_2:-67697935 | Msa0617260:three_prime_UTR |
| CTTATGCTCCCGCGGCAAAA+CGG | 0.489341 | 4_2:+67698204 | None:intergenic |
| GATTACTACAACTCAAACAA+AGG | 0.491285 | 4_2:+67697800 | None:intergenic |
| CTTCTCTGTATTTAAAGAGA+AGG | 0.494683 | 4_2:+67700078 | None:intergenic |
| AAGAAGAAGAAGAAAAGAGA+AGG | 0.499184 | 4_2:+67700247 | None:intergenic |
| GAAATTTCCCTAATCATGTC+AGG | 0.499305 | 4_2:-67697940 | Msa0617260:three_prime_UTR |
| AGTTTAAGAGAATCATGATA+AGG | 0.504946 | 4_2:+67700001 | None:intergenic |
| CTGCAAATGTGAATAGAGTC+TGG | 0.506936 | 4_2:-67697966 | Msa0617260:three_prime_UTR |
| TCTTTAAATACAGAGAAGAA+AGG | 0.506985 | 4_2:-67700073 | Msa0617260:five_prime_UTR |
| TCTTTCCAAATCAACATTGG+TGG | 0.515421 | 4_2:+67698602 | None:intergenic |
| TGCTGAAACAGTTTCAAAAG+AGG | 0.534779 | 4_2:-67698127 | Msa0617260:CDS |
| ATAACTTGAACCGTCTAAGC+TGG | 0.537803 | 4_2:+67698659 | None:intergenic |
| TGCTGCAATTCCAAGAGGCA+AGG | 0.539700 | 4_2:-67699693 | Msa0617260:CDS |
| TGATTCTCTTAAACTACTTG+AGG | 0.547630 | 4_2:-67699993 | Msa0617260:CDS |
| AGTTAATTCAGAGGATCTAT+GGG | 0.555807 | 4_2:-67698178 | Msa0617260:CDS |
| AAAGGACACACCAGCTTAGA+CGG | 0.559462 | 4_2:-67698669 | Msa0617260:CDS |
| TGGAAAGAGAAGATGAATGT+GGG | 0.570700 | 4_2:-67698587 | Msa0617260:CDS |
| AAGTTGGAGATTTGTATGAA+AGG | 0.571956 | 4_2:-67698687 | Msa0617260:CDS |
| GCAATTCCAAGAGGCAAGGG+TGG | 0.579405 | 4_2:-67699689 | Msa0617260:CDS |
| TAACTCTTCTTATGCTCCCG+CGG | 0.587616 | 4_2:+67698196 | None:intergenic |
| TTGGAAAGAGAAGATGAATG+TGG | 0.593360 | 4_2:-67698588 | Msa0617260:CDS |
| GGAGTTATGTTATGTTGTGG+TGG | 0.594490 | 4_2:+67700207 | None:intergenic |
| CACATAGCATGACAGCAGTT+AGG | 0.601568 | 4_2:+67698531 | None:intergenic |
| CATAAGAAGAGTTAATTCAG+AGG | 0.602522 | 4_2:-67698187 | Msa0617260:CDS |
| AAACATACAAAGCATTGGCA+TGG | 0.607704 | 4_2:+67699960 | None:intergenic |
| GCTGCAATTCCAAGAGGCAA+GGG | 0.614399 | 4_2:-67699692 | Msa0617260:CDS |
| ATGTGATCACCAACCACTTG+CGG | 0.619189 | 4_2:+67698496 | None:intergenic |
| ACATTAAGAAAAGTGCATCT+GGG | 0.621660 | 4_2:+67698058 | None:intergenic |
| GTTAATATGAGAAATGGATG+AGG | 0.627157 | 4_2:+67700167 | None:intergenic |
| CAATTCCAAGAGGCAAGGGT+GGG | 0.635948 | 4_2:-67699688 | Msa0617260:CDS |
| GTATCAAATGCTACCGCAAG+TGG | 0.663922 | 4_2:-67698509 | Msa0617260:intron |
| AAGGGAGTTATGTTATGTTG+TGG | 0.668255 | 4_2:+67700204 | None:intergenic |
| AGGAACTGCCAAAAGCAAAG+AGG | 0.676021 | 4_2:+67700267 | None:intergenic |
| AGGGCTGCTGCAATTCCAAG+AGG | 0.678141 | 4_2:-67699698 | Msa0617260:CDS |
| TTACTCTACATTGTCTACAG+AGG | 0.688991 | 4_2:+67697847 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTTTTAATTGAGTA+AGG | - | chr4_2:67699942-67699961 | Msa0617260:intron | 10.0% |
| !! | GAAAAAAAAAAAATTAGTGA+GGG | - | chr4_2:67697909-67697928 | Msa0617260:intron | 15.0% |
| !! | TAACCTTGTATATAATTATA+TGG | + | chr4_2:67698411-67698430 | None:intergenic | 15.0% |
| !! | TTACATATTACACTTATATT+TGG | + | chr4_2:67698623-67698642 | None:intergenic | 15.0% |
| !! | TATTTAAAGAGAAGGAAAAA+GGG | + | chr4_2:67697877-67697896 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAAATTAGTG+AGG | - | chr4_2:67697908-67697927 | Msa0617260:intron | 20.0% |
| !! | AAAAAAAACATACAAAGCAT+TGG | + | chr4_2:67698008-67698027 | None:intergenic | 20.0% |
| !! | AAAAAAAGTGGATAAGAAAA+AGG | + | chr4_2:67698035-67698054 | None:intergenic | 20.0% |
| !! | AAAATGATTCTTTGTTCAAA+AGG | - | chr4_2:67698096-67698115 | Msa0617260:CDS | 20.0% |
| !! | AAATGATTCTTTGTTCAAAA+GGG | - | chr4_2:67698097-67698116 | Msa0617260:CDS | 20.0% |
| !!! | CATGATTAATTTTTTTCTAG+TGG | - | chr4_2:67698127-67698146 | Msa0617260:CDS | 20.0% |
| !!! | TTGTTTCTGAAATTTTGTTT+TGG | - | chr4_2:67698223-67698242 | Msa0617260:CDS | 20.0% |
| !! | CTTCCATATAATTATATACA+AGG | - | chr4_2:67698405-67698424 | Msa0617260:intron | 20.0% |
| !!! | TGTTTTATTTCTTTTGTTGT+TGG | - | chr4_2:67698968-67698987 | Msa0617260:intron | 20.0% |
| !! | TAAATAACTTCAACAACAAA+AGG | + | chr4_2:67699125-67699144 | None:intergenic | 20.0% |
| !! | CAATTTCACATAAAGTAATA+TGG | + | chr4_2:67699678-67699697 | None:intergenic | 20.0% |
| ! | TGATGAGTTAATATGAGAAA+TGG | + | chr4_2:67697802-67697821 | None:intergenic | 25.0% |
| ! | GTATTTAAAGAGAAGGAAAA+AGG | + | chr4_2:67697878-67697897 | None:intergenic | 25.0% |
| ! | TCTTTAAATACAGAGAAGAA+AGG | - | chr4_2:67697887-67697906 | Msa0617260:intron | 25.0% |
| ! | AGTTTAAGAGAATCATGATA+AGG | + | chr4_2:67697962-67697981 | None:intergenic | 25.0% |
| !!! | TTTTTCTAGTGGTTAATCTA+TGG | - | chr4_2:67698138-67698157 | Msa0617260:CDS | 25.0% |
| !!! | TGATGTCTGATTTTTTTGTT+TGG | - | chr4_2:67698170-67698189 | Msa0617260:CDS | 25.0% |
| !!! | TTTTTTTGTTGTTGTTGCAA+TGG | - | chr4_2:67698338-67698357 | Msa0617260:intron | 25.0% |
| ! | AAAATTGCACATGAATGAAA+GGG | + | chr4_2:67698591-67698610 | None:intergenic | 25.0% |
| !!! | ATCTGTTGATTCTATAAACT+TGG | - | chr4_2:67698679-67698698 | Msa0617260:CDS | 25.0% |
| ! | TAAATTACAAACAAGCTTTG+AGG | + | chr4_2:67698931-67698950 | None:intergenic | 25.0% |
| !! | GTTCTTCTTTTTCTTAACAA+AGG | - | chr4_2:67699004-67699023 | Msa0617260:intron | 25.0% |
| !! | TTAACAAAGGTACATAATGA+TGG | - | chr4_2:67699017-67699036 | Msa0617260:intron | 25.0% |
| ! | AAAAAGGGAGAAATTAGTAA+AGG | + | chr4_2:67699198-67699217 | None:intergenic | 25.0% |
| ! | ACAGCTAAAGTTCAAAAAAA+GGG | + | chr4_2:67699213-67699232 | None:intergenic | 25.0% |
| ! | AACAGCTAAAGTTCAAAAAA+AGG | + | chr4_2:67699214-67699233 | None:intergenic | 25.0% |
| ! | CAAATGTTATGATTGATTGA+TGG | + | chr4_2:67699537-67699556 | None:intergenic | 25.0% |
| ! | CATCAATCAATCATAACATT+TGG | - | chr4_2:67699535-67699554 | Msa0617260:intron | 25.0% |
| ! | TGAAAAGTTGTACAAATGAT+AGG | - | chr4_2:67699593-67699612 | Msa0617260:CDS | 25.0% |
| ! | AAGGAGAAAAATATTCAGAT+TGG | - | chr4_2:67699961-67699980 | Msa0617260:intron | 25.0% |
| ! | AGGAGAAAAATATTCAGATT+GGG | - | chr4_2:67699962-67699981 | Msa0617260:intron | 25.0% |
| AAGAAGAAGAAGAAAAGAGA+AGG | + | chr4_2:67697716-67697735 | None:intergenic | 30.0% | |
| GTTAATATGAGAAATGGATG+AGG | + | chr4_2:67697796-67697815 | None:intergenic | 30.0% | |
| AAACTTAGTCAACACTTGTT+CGG | - | chr4_2:67697840-67697859 | Msa0617260:three_prime_UTR | 30.0% | |
| CTTCTCTGTATTTAAAGAGA+AGG | + | chr4_2:67697885-67697904 | None:intergenic | 30.0% | |
| AAAAAATTAGTGAGGGAAGA+TGG | - | chr4_2:67697916-67697935 | Msa0617260:three_prime_UTR | 30.0% | |
| TGATTCTCTTAAACTACTTG+AGG | - | chr4_2:67697967-67697986 | Msa0617260:three_prime_UTR | 30.0% | |
| !! | TTGGTTATGTGTTGTTGTTT+AGG | - | chr4_2:67698242-67698261 | Msa0617260:intron | 30.0% |
| !! | TGGTTATGTGTTGTTGTTTA+GGG | - | chr4_2:67698243-67698262 | Msa0617260:intron | 30.0% |
| ! | GAGTGTTTTCCAAATGAAAT+TGG | - | chr4_2:67698294-67698313 | Msa0617260:intron | 30.0% |
| GACTGTAAACCAATTTCATT+TGG | + | chr4_2:67698306-67698325 | None:intergenic | 30.0% | |
| ! | GAAATTGGTTTACAGTCAAT+TGG | - | chr4_2:67698309-67698328 | Msa0617260:intron | 30.0% |
| TGCAACAACAACAAAAAAAG+AGG | + | chr4_2:67698337-67698356 | None:intergenic | 30.0% | |
| TCTCTATTCAAAGAGTTCAA+AGG | - | chr4_2:67698469-67698488 | Msa0617260:intron | 30.0% | |
| CTCTATTCAAAGAGTTCAAA+GGG | - | chr4_2:67698470-67698489 | Msa0617260:intron | 30.0% | |
| GAAAATTGCACATGAATGAA+AGG | + | chr4_2:67698592-67698611 | None:intergenic | 30.0% | |
| ! | TTCTCAGTGTTGTTAATTAG+TGG | - | chr4_2:67698720-67698739 | Msa0617260:intron | 30.0% |
| TTGTTAATTAGTGGCTATAG+TGG | - | chr4_2:67698729-67698748 | Msa0617260:intron | 30.0% | |
| TTGTTTAGCACAAAATGTTG+TGG | - | chr4_2:67698808-67698827 | Msa0617260:intron | 30.0% | |
| !! | AGGTGTCTTTTAAAAGTCAA+AGG | + | chr4_2:67699105-67699124 | None:intergenic | 30.0% |
| AAGTTGGAGATTTGTATGAA+AGG | - | chr4_2:67699273-67699292 | Msa0617260:intron | 30.0% | |
| AAGAAGATGATTGAAGCAAA+TGG | - | chr4_2:67699327-67699346 | Msa0617260:intron | 30.0% | |
| TTCTCTTTCCAAATCAACAT+TGG | + | chr4_2:67699364-67699383 | None:intergenic | 30.0% | |
| ! | CATTTGTACAACTTTTCAGT+TGG | + | chr4_2:67699591-67699610 | None:intergenic | 30.0% |
| TACAAATGATAGGTTGTGAT+TGG | - | chr4_2:67699603-67699622 | Msa0617260:CDS | 30.0% | |
| CATAAGAAGAGTTAATTCAG+AGG | - | chr4_2:67699773-67699792 | Msa0617260:intron | 30.0% | |
| AGTTAATTCAGAGGATCTAT+GGG | - | chr4_2:67699782-67699801 | Msa0617260:intron | 30.0% | |
| TAGGTAAGCTGTTGATATAA+AGG | + | chr4_2:67699875-67699894 | None:intergenic | 30.0% | |
| ! | ACATTAAGAAAAGTGCATCT+GGG | + | chr4_2:67699905-67699924 | None:intergenic | 30.0% |
| ! | TACATTAAGAAAAGTGCATC+TGG | + | chr4_2:67699906-67699925 | None:intergenic | 30.0% |
| GGAGAAAAATATTCAGATTG+GGG | - | chr4_2:67699963-67699982 | Msa0617260:intron | 30.0% | |
| GATTACTACAACTCAAACAA+AGG | + | chr4_2:67700163-67700182 | None:intergenic | 30.0% | |
| AAGGGAGTTATGTTATGTTG+TGG | + | chr4_2:67697759-67697778 | None:intergenic | 35.0% | |
| GAGGATGAAGAAAAAGGAAA+GGG | + | chr4_2:67697777-67697796 | None:intergenic | 35.0% | |
| TGAGGATGAAGAAAAAGGAA+AGG | + | chr4_2:67697778-67697797 | None:intergenic | 35.0% | |
| ATGGATGAGGATGAAGAAAA+AGG | + | chr4_2:67697783-67697802 | None:intergenic | 35.0% | |
| !! | ACAAGTGTTGACTAAGTTTG+TGG | + | chr4_2:67697839-67697858 | None:intergenic | 35.0% |
| !! | AAACATACAAAGCATTGGCA+TGG | + | chr4_2:67698003-67698022 | None:intergenic | 35.0% |
| CACACACACACAATAAAACA+TGG | + | chr4_2:67698198-67698217 | None:intergenic | 35.0% | |
| !! | TTTGTTGTTGTTGCAATGGA+TGG | - | chr4_2:67698342-67698361 | Msa0617260:intron | 35.0% |
| TATAGAAAACACCAGCATTG+AGG | + | chr4_2:67698441-67698460 | None:intergenic | 35.0% | |
| ! | TGATTTTGCCATCCAAAAAG+AGG | - | chr4_2:67698541-67698560 | Msa0617260:CDS | 35.0% |
| CACAAAATGTTGTGGAATAC+CGG | - | chr4_2:67698816-67698835 | Msa0617260:intron | 35.0% | |
| !!! | GCTTTTTTCTGGTTAGGATT+AGG | - | chr4_2:67698903-67698922 | Msa0617260:intron | 35.0% |
| AGACCAAGTATAACTTCTCA+TGG | - | chr4_2:67699041-67699060 | Msa0617260:intron | 35.0% | |
| CTTCCATGAGAAGTTATACT+TGG | + | chr4_2:67699047-67699066 | None:intergenic | 35.0% | |
| CAAGTATAACTTCTCATGGA+AGG | - | chr4_2:67699045-67699064 | Msa0617260:intron | 35.0% | |
| ! | ACTAACCACCAATGTTGATT+TGG | - | chr4_2:67699353-67699372 | Msa0617260:intron | 35.0% |
| TCTTTCCAAATCAACATTGG+TGG | + | chr4_2:67699361-67699380 | None:intergenic | 35.0% | |
| TTGGAAAGAGAAGATGAATG+TGG | - | chr4_2:67699372-67699391 | Msa0617260:intron | 35.0% | |
| TGGAAAGAGAAGATGAATGT+GGG | - | chr4_2:67699373-67699392 | Msa0617260:intron | 35.0% | |
| ACTTTGTGTTCCTGCAAAAT+TGG | + | chr4_2:67699725-67699744 | None:intergenic | 35.0% | |
| GAGTTAATTCAGAGGATCTA+TGG | - | chr4_2:67699781-67699800 | Msa0617260:intron | 35.0% | |
| TGCTGAAACAGTTTCAAAAG+AGG | - | chr4_2:67699833-67699852 | Msa0617260:intron | 35.0% | |
| GAAATTTCCCTAATCATGTC+AGG | - | chr4_2:67700020-67700039 | Msa0617260:CDS | 35.0% | |
| GCTTTGCTAAGATAGATTTC+TGG | - | chr4_2:67700047-67700066 | Msa0617260:exon | 35.0% | |
| CTACAGAGGAGATGATATAT+AGG | + | chr4_2:67700102-67700121 | None:intergenic | 35.0% | |
| TTACTCTACATTGTCTACAG+AGG | + | chr4_2:67700116-67700135 | None:intergenic | 35.0% | |
| GCATGACAGATAAAGGATAA+TGG | + | chr4_2:67700221-67700240 | None:intergenic | 35.0% | |
| TGAACATGCATGACAGATAA+AGG | + | chr4_2:67700228-67700247 | None:intergenic | 35.0% | |
| ! | ACGACATTCCTCTTTGCTTT+TGG | - | chr4_2:67697685-67697704 | Msa0617260:three_prime_UTR | 40.0% |
| GGAGTTATGTTATGTTGTGG+TGG | + | chr4_2:67697756-67697775 | None:intergenic | 40.0% | |
| GTTAGTCAATTCCTCAATGC+TGG | - | chr4_2:67698427-67698446 | Msa0617260:intron | 40.0% | |
| ! | ATAGCAATGTTTTGTCTGCG+AGG | - | chr4_2:67698499-67698518 | Msa0617260:intron | 40.0% |
| !! | GCGAGGTTGTAGTTTTTAAG+AGG | - | chr4_2:67698516-67698535 | Msa0617260:CDS | 40.0% |
| ! | AAAAAGCGTGCTGTCAATTG+TGG | + | chr4_2:67698890-67698909 | None:intergenic | 40.0% |
| !!! | ATTGACAGCACGCTTTTTTC+TGG | - | chr4_2:67698892-67698911 | Msa0617260:intron | 40.0% |
| TTCACACACCATAAAAGTCC+TGG | + | chr4_2:67699082-67699101 | None:intergenic | 40.0% | |
| !! | ACACTTTCGTTTGTTGTTGG+GGG | + | chr4_2:67699158-67699177 | None:intergenic | 40.0% |
| !! | CACACTTTCGTTTGTTGTTG+GGG | + | chr4_2:67699159-67699178 | None:intergenic | 40.0% |
| !! | GCACACTTTCGTTTGTTGTT+GGG | + | chr4_2:67699160-67699179 | None:intergenic | 40.0% |
| !! | AGCACACTTTCGTTTGTTGT+TGG | + | chr4_2:67699161-67699180 | None:intergenic | 40.0% |
| TTATATTACCGTCTCTCCAG+CGG | - | chr4_2:67699232-67699251 | Msa0617260:intron | 40.0% | |
| TCATGGTAGTTTGGAGAAGT+TGG | - | chr4_2:67699257-67699276 | Msa0617260:intron | 40.0% | |
| ATAACTTGAACCGTCTAAGC+TGG | + | chr4_2:67699304-67699323 | None:intergenic | 40.0% | |
| ! | AGCTTAGACGGTTCAAGTTA+TGG | - | chr4_2:67699303-67699322 | Msa0617260:intron | 40.0% |
| CTTAGAACCATGCACCAAAA+TGG | - | chr4_2:67699401-67699420 | Msa0617260:intron | 40.0% | |
| ! | GCAGTTAGGCAAAACCATTT+TGG | + | chr4_2:67699418-67699437 | None:intergenic | 40.0% |
| ! | GATAGGTTGTGATTGGTTGA+CGG | - | chr4_2:67699610-67699629 | Msa0617260:CDS | 40.0% |
| ! | CACTCTTATGCCAATTTTGC+AGG | - | chr4_2:67699712-67699731 | Msa0617260:intron | 40.0% |
| AGTGCATCTGGGTAATCTTT+AGG | + | chr4_2:67699894-67699913 | None:intergenic | 40.0% | |
| CTGCAAATGTGAATAGAGTC+TGG | - | chr4_2:67699994-67700013 | Msa0617260:CDS | 40.0% | |
| TTCCCTAATCATGTCAGGTA+TGG | - | chr4_2:67700025-67700044 | Msa0617260:CDS | 40.0% | |
| AGCCATACCTGACATGATTA+GGG | + | chr4_2:67700030-67700049 | None:intergenic | 40.0% | |
| AAGCCATACCTGACATGATT+AGG | + | chr4_2:67700031-67700050 | None:intergenic | 40.0% | |
| GATGATATATAGGCCAAGAG+TGG | + | chr4_2:67700092-67700111 | None:intergenic | 40.0% | |
| AGGAACTGCCAAAAGCAAAG+AGG | + | chr4_2:67697696-67697715 | None:intergenic | 45.0% | |
| GCACATGAATGAAAGGGAAG+CGG | + | chr4_2:67698585-67698604 | None:intergenic | 45.0% | |
| !!! | CAGCACGCTTTTTTCTGGTT+AGG | - | chr4_2:67698897-67698916 | Msa0617260:intron | 45.0% |
| ! | GCAACCATCCAGGACTTTTA+TGG | - | chr4_2:67699071-67699090 | Msa0617260:intron | 45.0% |
| CACACCATAAAAGTCCTGGA+TGG | + | chr4_2:67699078-67699097 | None:intergenic | 45.0% | |
| AAAGGACACACCAGCTTAGA+CGG | - | chr4_2:67699291-67699310 | Msa0617260:intron | 45.0% | |
| !! | GGCAAAACCATTTTGGTGCA+TGG | + | chr4_2:67699411-67699430 | None:intergenic | 45.0% |
| CACATAGCATGACAGCAGTT+AGG | + | chr4_2:67699432-67699451 | None:intergenic | 45.0% | |
| GTATCAAATGCTACCGCAAG+TGG | - | chr4_2:67699451-67699470 | Msa0617260:intron | 45.0% | |
| ATGTGATCACCAACCACTTG+CGG | + | chr4_2:67699467-67699486 | None:intergenic | 45.0% | |
| TAACTCTTCTTATGCTCCCG+CGG | + | chr4_2:67699767-67699786 | None:intergenic | 45.0% | |
| GATCCCAGAATAACCACTCT+TGG | - | chr4_2:67700076-67700095 | Msa0617260:five_prime_UTR | 45.0% | |
| AGGCCAAGAGTGGTTATTCT+GGG | + | chr4_2:67700082-67700101 | None:intergenic | 45.0% | |
| TAGGCCAAGAGTGGTTATTC+TGG | + | chr4_2:67700083-67700102 | None:intergenic | 45.0% | |
| !! | ATATATATATAAAAAAAAAG+TGG | + | chr4_2:67698047-67698066 | None:intergenic | 5.0% |
| TGCTGCAATTCCAAGAGGCA+AGG | - | chr4_2:67698267-67698286 | Msa0617260:intron | 50.0% | |
| GCTGCAATTCCAAGAGGCAA+GGG | - | chr4_2:67698268-67698287 | Msa0617260:intron | 50.0% | |
| CAATTCCAAGAGGCAAGGGT+GGG | - | chr4_2:67698272-67698291 | Msa0617260:intron | 50.0% | |
| ! | GCACGCTACCTCTTTTTGGA+TGG | + | chr4_2:67698552-67698571 | None:intergenic | 50.0% |
| ! | AGCTGCACGCTACCTCTTTT+TGG | + | chr4_2:67698556-67698575 | None:intergenic | 50.0% |
| GCTATAGCGCAGTTGCATAG+AGG | - | chr4_2:67698753-67698772 | Msa0617260:intron | 50.0% | |
| CCGCTACACAACAACACTAC+CGG | + | chr4_2:67698838-67698857 | None:intergenic | 50.0% | |
| ! | CCGGTAGTGTTGTTGTGTAG+CGG | - | chr4_2:67698835-67698854 | Msa0617260:intron | 50.0% |
| TGGAAGGAAAGCAACCATCC+AGG | - | chr4_2:67699061-67699080 | Msa0617260:intron | 50.0% | |
| CAAATGCTACCGCAAGTGGT+TGG | - | chr4_2:67699455-67699474 | Msa0617260:intron | 50.0% | |
| AGGGCTGCTGCAATTCCAAG+AGG | - | chr4_2:67698262-67698281 | Msa0617260:intron | 55.0% | |
| GCAATTCCAAGAGGCAAGGG+TGG | - | chr4_2:67698271-67698290 | Msa0617260:intron | 55.0% | |
| CCAAACTACCATGAAGCCGC+TGG | + | chr4_2:67699251-67699270 | None:intergenic | 55.0% | |
| CCAGCGGCTTCATGGTAGTT+TGG | - | chr4_2:67699248-67699267 | Msa0617260:intron | 55.0% | |
| !! | GAGTCTTGTCCGTTTTGCCG+CGG | - | chr4_2:67699747-67699766 | Msa0617260:intron | 55.0% |
| !! | AGTCTTGTCCGTTTTGCCGC+GGG | - | chr4_2:67699748-67699767 | Msa0617260:intron | 55.0% |
| CTTATGCTCCCGCGGCAAAA+CGG | + | chr4_2:67699759-67699778 | None:intergenic | 55.0% | |
| ACACTCCCACCCTTGCCTCT+TGG | + | chr4_2:67698280-67698299 | None:intergenic | 60.0% | |
| CCATGAAGCCGCTGGAGAGA+CGG | + | chr4_2:67699243-67699262 | None:intergenic | 60.0% | |
| CCGTCTCTCCAGCGGCTTCA+TGG | - | chr4_2:67699240-67699259 | Msa0617260:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 67697681 | 67700301 | 67697681 | ID=Msa0617260;Name=Msa0617260 |
| chr4_2 | mRNA | 67697681 | 67700301 | 67697681 | ID=Msa0617260-mRNA-1;Parent=Msa0617260;Name=Msa0617260-mRNA-1;_AED=0.19;_eAED=0.19;_QI=254|0.75|0.8|1|0.75|0.6|5|329|224 |
| chr4_2 | exon | 67697681 | 67697885 | 67697681 | ID=Msa0617260-mRNA-1:exon:19405;Parent=Msa0617260-mRNA-1 |
| chr4_2 | exon | 67697914 | 67698248 | 67697914 | ID=Msa0617260-mRNA-1:exon:19404;Parent=Msa0617260-mRNA-1 |
| chr4_2 | exon | 67698510 | 67698730 | 67698510 | ID=Msa0617260-mRNA-1:exon:19403;Parent=Msa0617260-mRNA-1 |
| chr4_2 | exon | 67699556 | 67699718 | 67699556 | ID=Msa0617260-mRNA-1:exon:19402;Parent=Msa0617260-mRNA-1 |
| chr4_2 | exon | 67699968 | 67700301 | 67699968 | ID=Msa0617260-mRNA-1:exon:19401;Parent=Msa0617260-mRNA-1 |
| chr4_2 | five_prime_UTR | 67700048 | 67700301 | 67700048 | ID=Msa0617260-mRNA-1:five_prime_utr;Parent=Msa0617260-mRNA-1 |
| chr4_2 | CDS | 67699968 | 67700047 | 67699968 | ID=Msa0617260-mRNA-1:cds;Parent=Msa0617260-mRNA-1 |
| chr4_2 | CDS | 67699556 | 67699718 | 67699556 | ID=Msa0617260-mRNA-1:cds;Parent=Msa0617260-mRNA-1 |
| chr4_2 | CDS | 67698510 | 67698730 | 67698510 | ID=Msa0617260-mRNA-1:cds;Parent=Msa0617260-mRNA-1 |
| chr4_2 | CDS | 67698038 | 67698248 | 67698038 | ID=Msa0617260-mRNA-1:cds;Parent=Msa0617260-mRNA-1 |
| chr4_2 | three_prime_UTR | 67697914 | 67698037 | 67697914 | ID=Msa0617260-mRNA-1:three_prime_utr;Parent=Msa0617260-mRNA-1 |
| chr4_2 | three_prime_UTR | 67697681 | 67697885 | 67697681 | ID=Msa0617260-mRNA-1:three_prime_utr;Parent=Msa0617260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
