AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1045450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1045450 MtrunA17_Chr8g0335471 100.000 203 0 0 1 203 1 203 2.57e-153 422
Msa1045450 MtrunA17_Chr7g0250531 94.581 203 10 1 1 203 1 202 4.03e-144 399
Msa1045450 MtrunA17_Chr4g0055651 88.177 203 23 1 1 203 1 202 7.22e-135 376
Msa1045450 MtrunA17_Chr2g0276931 75.253 198 49 0 4 201 5 202 2.92e-112 318
Msa1045450 MtrunA17_Chr4g0030911 60.680 206 70 4 4 201 11 213 6.47e-85 250
Msa1045450 MtrunA17_Chr1g0212521 59.223 206 74 3 4 201 11 214 4.11e-84 248
Msa1045450 MtrunA17_Chr1g0182321 59.809 209 72 4 4 203 11 216 8.27e-84 247
Msa1045450 MtrunA17_Chr7g0263071 59.809 209 72 4 4 203 11 216 2.88e-83 246
Msa1045450 MtrunA17_Chr1g0182301 59.330 209 73 4 4 203 11 216 3.50e-83 246
Msa1045450 MtrunA17_Chr2g0327911 53.171 205 84 4 5 201 12 212 2.82e-71 215
Msa1045450 MtrunA17_Chr4g0032201 47.393 211 103 2 1 203 5 215 8.65e-67 204
Msa1045450 MtrunA17_Chr3g0112681 47.642 212 102 3 1 203 5 216 1.30e-63 196
Msa1045450 MtrunA17_Chr2g0276941 47.867 211 98 3 4 203 11 220 1.21e-62 194
Msa1045450 MtrunA17_Chr6g0458081 47.393 211 96 3 5 202 3 211 5.98e-61 189
Msa1045450 MtrunA17_Chr2g0283131 46.698 212 102 2 2 203 7 217 5.07e-60 187
Msa1045450 MtrunA17_Chr2g0315551 48.095 210 98 3 4 203 9 217 7.92e-60 186
Msa1045450 MtrunA17_Chr3g0123821 44.811 212 105 2 2 201 10 221 1.81e-59 186
Msa1045450 MtrunA17_Chr4g0040781 46.226 212 103 2 2 203 7 217 3.09e-59 185
Msa1045450 MtrunA17_Chr4g0046261 45.755 212 104 2 2 203 7 217 3.09e-59 185
Msa1045450 MtrunA17_Chr2g0290891 46.411 209 101 2 5 202 3 211 4.42e-59 184
Msa1045450 MtrunA17_Chr7g0265001 48.020 202 101 3 5 202 13 214 5.01e-59 184
Msa1045450 MtrunA17_Chr8g0381841 46.047 215 103 4 2 203 11 225 3.19e-58 182
Msa1045450 MtrunA17_Chr8g0384311 48.259 201 100 4 4 201 9 208 3.37e-58 182
Msa1045450 MtrunA17_Chr1g0159481 50.246 203 96 4 4 202 13 214 5.31e-58 181
Msa1045450 MtrunA17_Chr7g0231131 44.076 211 107 2 2 201 9 219 2.08e-57 180
Msa1045450 MtrunA17_Chr2g0325091 46.919 211 104 2 1 203 4 214 4.15e-57 179
Msa1045450 MtrunA17_Chr8g0349711 51.534 163 79 0 7 169 5 167 1.84e-56 177
Msa1045450 MtrunA17_Chr2g0319951 45.972 211 102 3 4 203 9 218 2.46e-56 177
Msa1045450 MtrunA17_Chr1g0189361 44.811 212 102 3 6 202 12 223 2.67e-56 177
Msa1045450 MtrunA17_Chr8g0351861 42.523 214 106 3 6 202 14 227 2.53e-55 175
Msa1045450 MtrunA17_Chr8g0346421 44.221 199 110 1 1 199 19 216 2.65e-55 175
Msa1045450 MtrunA17_Chr7g0234201 45.631 206 100 2 7 202 12 215 3.37e-55 174
Msa1045450 MtrunA17_Chr3g0130271 47.291 203 100 6 4 201 8 208 2.24e-54 172
Msa1045450 MtrunA17_Chr1g0174281 42.791 215 107 4 2 201 9 222 6.70e-54 171
Msa1045450 MtrunA17_Chr7g0275991 43.878 196 107 2 6 199 18 212 1.96e-53 170
Msa1045450 MtrunA17_Chr6g0482721 48.588 177 91 0 1 177 5 181 2.71e-53 169
Msa1045450 MtrunA17_Chr8g0349681 45.918 196 97 1 5 200 381 567 2.73e-53 179
Msa1045450 MtrunA17_Chr8g0349681 48.214 168 87 0 2 169 169 336 7.20e-51 172
Msa1045450 MtrunA17_Chr8g0349681 48.765 162 83 0 7 168 12 173 1.03e-48 167
Msa1045450 MtrunA17_Chr8g0392931 45.283 212 106 2 1 202 7 218 1.73e-52 167
Msa1045450 MtrunA17_Chr1g0180291 46.269 201 103 4 5 201 11 210 2.84e-52 167
Msa1045450 MtrunA17_Chr1g0197331 45.588 204 108 3 2 202 9 212 1.09e-51 165
Msa1045450 MtrunA17_Chr7g0214241 51.282 156 76 0 7 162 14 169 2.99e-50 162
Msa1045450 MtrunA17_Chr3g0109721 41.026 195 107 3 10 202 12 200 1.89e-46 152
Msa1045450 MtrunA17_Chr5g0433561 40.000 195 109 3 10 202 12 200 1.09e-44 147
Msa1045450 MtrunA17_Chr8g0390561 39.487 195 109 3 10 202 11 198 1.05e-43 144
Msa1045450 MtrunA17_Chr5g0400131 37.563 197 117 2 9 200 10 205 2.64e-42 141
Msa1045450 MtrunA17_Chr1g0199331 43.038 158 89 1 10 166 33 190 3.53e-42 140
Msa1045450 MtrunA17_Chr8g0382221 37.313 201 115 3 9 202 10 206 5.16e-42 140
Msa1045450 MtrunA17_Chr4g0055081 39.130 161 98 0 9 169 10 170 2.00e-40 136
Msa1045450 MtrunA17_Chr3g0123971 40.994 161 95 0 9 169 10 170 2.28e-40 136
Msa1045450 MtrunA17_Chr2g0331691 37.313 201 116 4 8 201 10 207 3.31e-39 133
Msa1045450 MtrunA17_Chr4g0004661 37.313 201 116 4 8 201 64 261 3.01e-38 132
Msa1045450 MtrunA17_Chr4g0034871 37.000 200 116 4 8 200 8 204 4.78e-38 130
Msa1045450 MtrunA17_Chr6g0466301 38.554 166 95 3 8 166 8 173 1.30e-34 121
Msa1045450 MtrunA17_Chr6g0465491 38.554 166 95 3 8 166 8 173 1.30e-34 121
Msa1045450 MtrunA17_Chr8g0383261 39.157 166 94 3 8 166 12 177 1.67e-34 121
Msa1045450 MtrunA17_Chr1g0201121 37.952 166 96 3 8 166 8 173 8.67e-34 119
Msa1045450 MtrunA17_Chr3g0117931 31.217 189 115 6 8 183 8 194 1.76e-23 93.2
Msa1045450 MtrunA17_Chr6g0465471 33.929 168 101 4 25 185 7 171 4.37e-23 92.0
Msa1045450 MtrunA17_Chr6g0486041 32.335 167 99 5 8 162 6 170 5.57e-23 91.7
Msa1045450 MtrunA17_Chr3g0138101 32.447 188 111 6 9 189 14 192 5.95e-23 92.0
Msa1045450 MtrunA17_Chr3g0138121 32.447 188 111 6 9 189 14 192 6.40e-23 92.0
Msa1045450 MtrunA17_Chr3g0138111 32.447 188 111 6 9 189 14 192 6.61e-23 91.7
Msa1045450 MtrunA17_Chr6g0466161 35.570 149 89 3 25 166 7 155 9.75e-23 90.9
Msa1045450 MtrunA17_Chr4g0037021 31.737 167 100 5 8 162 6 170 1.60e-22 90.1
Msa1045450 MtrunA17_Chr8g0371501 33.728 169 98 6 8 164 6 172 2.16e-22 89.7
Msa1045450 MtrunA17_Chr2g0325101 32.000 175 102 6 8 170 6 175 3.25e-22 89.4
Msa1045450 MtrunA17_Chr5g0405791 33.136 169 99 6 8 164 6 172 1.17e-21 87.8
Msa1045450 MtrunA17_Chr4g0046211 36.134 119 73 3 8 125 6 122 2.66e-21 85.5
Msa1045450 MtrunA17_Chr1g0178291 35.260 173 102 4 5 177 428 590 2.57e-20 88.2
Msa1045450 MtrunA17_Chr6g0466431 35.354 99 55 1 8 106 8 97 5.43e-17 73.2
Msa1045450 MtrunA17_Chr6g0465611 35.354 99 55 1 8 106 8 97 5.43e-17 73.2
Msa1045450 MtrunA17_Chr5g0434561 32.500 160 90 6 9 159 20 170 8.06e-14 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1045450 AT1G02130.1 91.133 203 18 0 1 203 1 203 1.60e-142 395
Msa1045450 AT5G47200.1 86.700 203 26 1 1 203 1 202 1.27e-132 370
Msa1045450 AT4G17530.1 86.207 203 27 1 1 203 1 202 8.66e-132 368
Msa1045450 AT3G11730.1 73.399 203 52 2 1 201 1 203 1.25e-110 315
Msa1045450 AT5G59840.1 60.287 209 71 4 4 203 11 216 7.58e-85 250
Msa1045450 AT3G46060.2 58.852 209 74 4 4 203 11 216 5.22e-83 245
Msa1045450 AT3G46060.3 58.852 209 74 4 4 203 11 216 5.22e-83 245
Msa1045450 AT3G46060.1 58.852 209 74 4 4 203 11 216 5.22e-83 245
Msa1045450 AT3G53610.2 58.173 208 77 3 4 203 11 216 5.34e-83 245
Msa1045450 AT3G53610.3 58.173 208 77 3 4 203 11 216 5.34e-83 245
Msa1045450 AT3G53610.1 58.173 208 77 3 4 203 11 216 5.34e-83 245
Msa1045450 AT5G03520.1 59.709 206 74 3 4 202 11 214 1.59e-80 239
Msa1045450 AT3G09900.1 58.654 208 75 3 4 202 11 216 5.24e-79 235
Msa1045450 AT1G07410.1 45.714 210 107 2 1 203 5 214 7.53e-64 197
Msa1045450 AT1G09630.1 45.498 211 106 2 2 203 6 216 3.07e-61 190
Msa1045450 AT3G46830.1 45.070 213 107 1 1 203 5 217 8.83e-61 189
Msa1045450 AT3G46830.2 45.070 213 107 1 1 203 5 217 8.83e-61 189
Msa1045450 AT4G35860.1 53.939 165 76 0 5 169 3 167 9.01e-61 189
Msa1045450 AT4G17160.1 47.317 205 97 3 5 201 3 204 1.47e-60 188
Msa1045450 AT5G45750.1 47.596 208 101 1 4 203 9 216 1.59e-60 188
Msa1045450 AT4G39990.1 47.368 209 99 3 6 203 15 223 1.85e-60 188
Msa1045450 AT4G18430.1 49.282 209 95 3 4 202 9 216 2.60e-60 188
Msa1045450 AT3G15060.1 47.170 212 101 2 2 203 7 217 4.38e-60 187
Msa1045450 AT5G03520.2 55.689 167 65 3 43 202 40 204 4.76e-60 187
Msa1045450 AT5G60860.1 46.698 212 102 2 2 203 7 217 8.14e-60 187
Msa1045450 AT2G33870.1 46.445 211 101 3 4 203 9 218 1.55e-59 186
Msa1045450 AT1G16920.1 48.077 208 100 2 4 203 9 216 1.73e-59 186
Msa1045450 AT4G17170.1 52.663 169 80 0 5 173 3 171 2.50e-59 185
Msa1045450 AT5G59150.1 43.192 213 111 1 1 203 5 217 4.31e-59 185
Msa1045450 AT5G47520.1 46.667 210 100 2 6 203 12 221 7.37e-59 184
Msa1045450 AT1G06400.1 45.238 210 107 1 2 203 7 216 1.14e-58 184
Msa1045450 AT5G47960.1 44.651 215 107 3 1 203 8 222 1.75e-58 183
Msa1045450 AT1G28550.1 45.972 211 102 3 4 203 9 218 3.19e-58 182
Msa1045450 AT4G18800.1 46.602 206 104 1 4 203 9 214 5.13e-58 182
Msa1045450 AT5G65270.1 44.811 212 103 3 6 203 15 226 5.46e-58 182
Msa1045450 AT1G73640.1 48.515 202 96 2 4 197 9 210 1.02e-57 182
Msa1045450 AT3G12160.1 44.811 212 104 3 2 201 9 219 2.78e-57 180
Msa1045450 AT3G07410.1 45.894 207 102 2 6 202 10 216 1.47e-56 178
Msa1045450 AT1G43890.3 54.118 170 75 3 2 169 7 175 5.75e-55 174
Msa1045450 AT1G43890.1 54.118 170 75 3 2 169 7 175 5.75e-55 174
Msa1045450 AT1G43890.2 54.118 170 75 3 2 169 7 175 5.75e-55 174
Msa1045450 AT2G43130.1 43.137 204 109 2 6 202 10 213 6.31e-55 174
Msa1045450 AT1G18200.1 50.000 180 90 0 2 181 7 186 1.12e-54 174
Msa1045450 AT5G03530.2 47.030 202 102 4 5 202 10 210 3.56e-53 169
Msa1045450 AT5G03530.1 47.030 202 102 4 5 202 10 210 3.56e-53 169
Msa1045450 AT1G05810.1 43.269 208 108 2 6 203 10 217 3.98e-53 169
Msa1045450 AT2G31680.1 50.955 157 77 0 6 162 10 166 7.95e-53 169
Msa1045450 AT1G05810.2 43.269 208 108 2 6 203 56 263 9.41e-53 170
Msa1045450 AT1G01200.1 43.284 201 112 2 1 199 21 221 2.40e-49 160
Msa1045450 AT4G19640.1 41.837 196 104 3 10 202 12 200 5.12e-46 151
Msa1045450 AT3G09910.3 44.335 203 102 5 5 203 10 205 9.87e-46 150
Msa1045450 AT3G09910.1 44.335 203 102 5 5 203 10 205 9.87e-46 150
Msa1045450 AT3G09910.2 44.335 203 102 5 5 203 10 205 9.87e-46 150
Msa1045450 AT5G45130.1 40.306 196 107 2 10 202 12 200 2.00e-44 147
Msa1045450 AT3G09910.5 47.953 171 86 3 5 173 10 179 3.58e-44 146
Msa1045450 AT3G09910.4 47.953 171 86 3 5 173 10 179 3.58e-44 146
Msa1045450 AT5G45130.2 40.415 193 107 3 12 202 22 208 1.10e-42 142
Msa1045450 AT3G54840.1 44.805 154 84 1 10 162 35 188 2.33e-42 142
Msa1045450 AT2G44610.1 37.073 205 111 2 9 202 10 207 2.95e-42 141
Msa1045450 AT3G54840.2 44.805 154 84 1 10 162 35 188 3.17e-42 141
Msa1045450 AT3G54840.3 44.444 153 84 1 11 162 2 154 6.87e-42 139
Msa1045450 AT4G39890.1 41.358 162 94 1 9 169 10 171 1.06e-41 140
Msa1045450 AT2G22290.1 36.500 200 118 2 9 202 10 206 4.63e-41 138
Msa1045450 AT4G35860.2 52.500 120 57 0 50 169 2 121 1.94e-40 135
Msa1045450 AT5G10260.1 40.994 161 95 0 9 169 10 170 4.94e-40 136
Msa1045450 AT1G52280.1 36.715 207 121 4 1 200 1 204 7.32e-40 135
Msa1045450 AT3G16100.1 37.500 200 115 4 8 200 8 204 8.06e-40 135
Msa1045450 AT5G59150.2 40.244 164 88 1 50 203 3 166 1.97e-39 133
Msa1045450 AT3G18820.1 38.500 200 113 4 8 200 8 204 1.28e-38 132
Msa1045450 AT5G64990.1 39.759 166 100 0 9 174 8 173 2.22e-38 131
Msa1045450 AT2G21880.1 39.759 166 93 3 8 166 9 174 1.99e-36 127
Msa1045450 AT1G49300.2 36.000 200 118 4 8 200 8 204 2.55e-36 126
Msa1045450 AT1G49300.1 36.000 200 118 4 8 200 8 204 2.55e-36 126
Msa1045450 AT4G19640.3 45.038 131 72 0 10 140 12 142 1.32e-35 124
Msa1045450 AT5G64990.2 38.150 173 100 1 9 174 8 180 1.33e-35 124
Msa1045450 AT4G19640.2 45.600 125 68 0 10 134 12 136 7.52e-35 120
Msa1045450 AT4G09720.1 40.361 166 92 3 8 166 8 173 9.01e-34 120
Msa1045450 AT1G22740.1 38.182 165 95 3 8 165 8 172 3.71e-33 118
Msa1045450 AT4G09720.4 38.012 171 94 3 8 166 8 178 1.15e-31 114
Msa1045450 AT4G09720.3 36.723 177 94 3 8 166 8 184 1.08e-30 112
Msa1045450 AT5G39620.1 38.922 167 91 3 9 166 6 170 2.14e-30 111
Msa1045450 AT2G21880.4 40.876 137 74 3 37 166 13 149 1.71e-28 105
Msa1045450 AT2G21880.3 40.876 137 74 3 37 166 13 149 1.71e-28 105
Msa1045450 AT2G21880.2 34.940 166 93 4 8 166 9 166 1.30e-26 101
Msa1045450 AT4G09720.6 41.606 137 73 3 37 166 3 139 4.33e-26 99.4
Msa1045450 AT4G09720.5 41.606 137 73 3 37 166 3 139 4.33e-26 99.4
Msa1045450 AT4G09720.2 41.606 137 73 3 37 166 3 139 4.33e-26 99.4
Msa1045450 AT2G44690.1 33.533 167 97 5 8 162 18 182 1.16e-24 96.7
Msa1045450 AT4G35020.1 35.429 175 96 7 8 170 6 175 2.75e-24 95.1
Msa1045450 AT4G35020.2 35.429 175 96 7 8 170 6 175 2.75e-24 95.1
Msa1045450 AT4G35020.3 35.429 175 96 7 8 170 6 175 2.75e-24 95.1
Msa1045450 AT3G51300.1 35.329 167 94 6 10 164 8 172 5.84e-24 94.4
Msa1045450 AT2G17800.2 34.911 169 96 6 8 164 6 172 7.45e-24 94.0
Msa1045450 AT2G17800.1 34.911 169 96 6 8 164 6 172 7.45e-24 94.0
Msa1045450 AT4G35950.1 34.320 169 97 6 8 164 6 172 2.34e-23 92.8
Msa1045450 AT4G28950.1 31.034 203 118 8 8 200 6 196 4.93e-23 92.0
Msa1045450 AT1G75840.1 32.571 175 101 6 8 170 6 175 6.47e-23 91.7
Msa1045450 AT5G55080.1 30.270 185 114 4 9 189 14 187 3.94e-22 90.1
Msa1045450 AT5G45970.1 32.335 167 99 6 8 162 6 170 4.15e-22 89.7
Msa1045450 AT5G55190.1 32.609 184 116 5 9 189 14 192 5.58e-22 89.7
Msa1045450 AT5G46025.1 42.991 107 60 1 70 175 6 112 5.72e-22 86.7
Msa1045450 AT3G48040.1 31.250 176 106 6 8 170 8 181 8.80e-22 89.0
Msa1045450 AT5G20010.1 32.065 184 117 5 9 189 14 192 1.44e-21 88.6
Msa1045450 AT5G20020.1 31.522 184 118 5 9 189 14 192 1.70e-21 88.6
Msa1045450 AT1G20090.1 31.429 175 103 6 8 170 5 174 3.04e-21 87.0
Msa1045450 AT5G62880.1 30.539 167 102 5 8 162 8 172 1.05e-19 83.6
Msa1045450 AT3G48040.2 31.013 158 95 5 8 153 8 163 2.04e-19 82.0
Msa1045450 AT4G35020.4 35.965 114 70 3 10 122 8 119 2.54e-18 78.2
Msa1045450 AT4G35020.5 35.965 114 70 3 10 122 8 119 2.54e-18 78.2
Msa1045450 AT5G62880.2 33.333 123 79 3 8 129 8 128 2.80e-18 79.3
Msa1045450 AT3G51290.2 35.211 142 78 6 35 164 634 773 1.75e-14 71.6
Msa1045450 AT5G37680.1 31.288 163 94 6 9 162 20 173 1.40e-12 63.9
Msa1045450 AT5G67560.1 32.051 156 96 5 9 159 20 170 2.01e-11 60.8
Msa1045450 AT3G49870.2 32.919 161 88 7 9 159 1 151 3.12e-11 59.7
Msa1045450 AT2G15310.1 29.286 140 82 6 10 145 19 145 6.38e-11 59.7
Msa1045450 AT3G49870.1 31.677 161 90 7 9 159 20 170 6.73e-11 59.3
Msa1045450 AT5G64813.1 22.335 197 115 5 10 170 24 218 7.06e-11 60.8
Msa1045450 AT5G64813.3 22.335 197 115 5 10 170 24 218 7.06e-11 60.8
Msa1045450 AT5G64813.2 22.335 197 115 5 10 170 24 218 7.06e-11 60.8
Msa1045450 AT3G22950.1 30.159 126 80 4 1 125 12 130 8.72e-11 58.9
Msa1045450 AT3G22950.2 30.159 126 80 4 1 125 12 130 8.72e-11 58.9

Find 112 sgRNAs with CRISPR-Local

Find 640 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTTCAAGCTCCTTCTTAT+TGG 0.139580 7_2:+4954228 Msa1045450:CDS
TTTGCACTTGTTTCCATAAA+AGG 0.153571 7_2:-4955948 None:intergenic
ATTCTTTACATACACTTTAA+TGG 0.166971 7_2:+4956975 Msa1045450:three_prime_UTR
TAATCCACTTGTAATGTTAT+TGG 0.204262 7_2:-4957489 None:intergenic
ATAGCAGTACGAACTATAAA+AGG 0.206942 7_2:+4957365 Msa1045450:three_prime_UTR
CCACCGTGTGGTTTGGGAAT+TGG 0.282481 7_2:+4956936 Msa1045450:three_prime_UTR
TTTCGGTCGGTCACGGGTTT+GGG 0.292524 7_2:-4957796 None:intergenic
GTTTCGGTCGGTCACGGGTT+TGG 0.299123 7_2:-4957797 None:intergenic
CTGCCGGGCAAGAACGATTT+AGG 0.303257 7_2:+4955477 Msa1045450:CDS
TAATGTTATTGGTGGGTAAC+AGG 0.312590 7_2:-4957478 None:intergenic
CATAATCCACCGTGTGGTTT+GGG 0.328282 7_2:+4956930 Msa1045450:three_prime_UTR
AAGTGAAATACTTTCTAGTT+AGG 0.336680 7_2:-4956845 None:intergenic
GCATAATCCACCGTGTGGTT+TGG 0.344796 7_2:+4956929 Msa1045450:three_prime_UTR
TGATAATGTTAACAAGCTTT+TGG 0.346717 7_2:+4955708 Msa1045450:CDS
ACGTATTATTATGAATGATT+TGG 0.371731 7_2:-4952851 None:intergenic
CCGGTGGTACACGTGGAAAC+TGG 0.371788 7_2:-4952993 None:intergenic
CACGGTGGATTATGCAATAT+TGG 0.373350 7_2:-4956921 None:intergenic
TGGTGAAATATTCATTGTTT+CGG 0.379147 7_2:-4957813 None:intergenic
GGTGGGTTCAATCGGTTGTC+GGG 0.385630 7_2:+4957704 Msa1045450:three_prime_UTR
ATAACAAATCTTACATGAAA+AGG 0.389811 7_2:-4956882 None:intergenic
GGGTGGGTTCAATCGGTTGT+CGG 0.391072 7_2:+4957703 Msa1045450:three_prime_UTR
TTCATTGTTTCGGTCGGTCA+CGG 0.392077 7_2:-4957803 None:intergenic
CTCCTTCTTATTGGAGACTC+TGG 0.406221 7_2:+4954237 Msa1045450:CDS
ATTAAAGTGTATGTAAAGAA+TGG 0.415581 7_2:-4956973 None:intergenic
AAATGTGGAAGGAGCATTCA+TGG 0.416001 7_2:+4955980 Msa1045450:CDS
CTTCTTCTTCTCTTCTCCGT+TGG 0.416764 7_2:+4952961 Msa1045450:five_prime_UTR
GTTGAATTAAAGCTTTAATA+CGG 0.428306 7_2:-4952876 None:intergenic
CCTCCAACAGTGCAGATTAG+AGG 0.441575 7_2:+4956787 Msa1045450:CDS
GTACACGTGGAAACTGGAAT+TGG 0.441991 7_2:-4952987 None:intergenic
CTTGAAGGTTCTTCTCAGTA+GGG 0.446044 7_2:+4957619 Msa1045450:three_prime_UTR
CCTCTAATCTGCACTGTTGG+AGG 0.450000 7_2:-4956787 None:intergenic
TCTTGAAGGTTCTTCTCAGT+AGG 0.453540 7_2:+4957618 Msa1045450:three_prime_UTR
CTTATTGGAGACTCTGGTGT+TGG 0.464289 7_2:+4954243 Msa1045450:CDS
TGAATAATAACGAAGGTTAA+CGG 0.464933 7_2:-4957554 None:intergenic
TTGACAGTACACTCTCTTGA+AGG 0.468140 7_2:+4957604 Msa1045450:three_prime_UTR
TAATGAGCACCTATCCTTGA+TGG 0.471028 7_2:-4956015 None:intergenic
TCATTGTTTCGGTCGGTCAC+GGG 0.474102 7_2:-4957802 None:intergenic
TTCTTGTAGTGGGACACTGC+CGG 0.479251 7_2:+4955461 Msa1045450:intron
TCCACTTGTAATGTTATTGG+TGG 0.482149 7_2:-4957486 None:intergenic
TAACAAATCTTACATGAAAA+GGG 0.486430 7_2:-4956881 None:intergenic
TTAAAGTGTATGTAAAGAAT+GGG 0.487470 7_2:-4956972 None:intergenic
AGCTACTATCGTGGGGCACA+TGG 0.488301 7_2:+4955512 Msa1045450:CDS
ATCCTTGATGGCAGCAGCCA+TGG 0.490402 7_2:-4956003 None:intergenic
TATTGCATAATTTATTGTGA+TGG 0.491182 7_2:-4957315 None:intergenic
CAGGAATTTGCAGATCAAAT+CGG 0.492691 7_2:+4955921 Msa1045450:intron
TTCGAACTGTTGAGCAGGAT+GGG 0.495201 7_2:+4955323 Msa1045450:CDS
TTTGTTATGTCACTAAATAG+TGG 0.500054 7_2:+4956897 Msa1045450:three_prime_UTR
AAGCTTGTTAACATTATCAC+TGG 0.500079 7_2:-4955704 None:intergenic
TGTCCTCTAATCTGCACTGT+TGG 0.502752 7_2:-4956790 None:intergenic
TGGAGGCCTTGCATTGTTTG+CGG 0.503248 7_2:-4956770 None:intergenic
GAAATATCCTATAAATAAAG+AGG 0.507442 7_2:+4957419 Msa1045450:three_prime_UTR
GGCCTTGCATTGTTTGCGGA+TGG 0.508567 7_2:-4956766 None:intergenic
TACACGTGGAAACTGGAATT+GGG 0.508797 7_2:-4952986 None:intergenic
GGCCATGGCTGCTGCCATCA+AGG 0.509743 7_2:+4956001 Msa1045450:CDS
TCTTGTAGTGGGACACTGCC+GGG 0.511489 7_2:+4955462 Msa1045450:intron
GGAGGAAGAGTGATCGGATC+CGG 0.513337 7_2:-4953012 None:intergenic
TTGCATTGTTTGCGGATGGT+TGG 0.514800 7_2:-4956762 None:intergenic
ATGATGCGGGTGGGTTCAAT+CGG 0.517243 7_2:+4957696 Msa1045450:three_prime_UTR
TTACAGCAAATCTTAGAAGA+AGG 0.520470 7_2:-4954275 None:intergenic
ATGTATACATGAAGTTCGTA+TGG 0.523531 7_2:-4957179 None:intergenic
ATTCGAACTGTTGAGCAGGA+TGG 0.524930 7_2:+4955322 Msa1045450:CDS
GAAAATTCGAACTGTTGAGC+AGG 0.528077 7_2:+4955318 Msa1045450:intron
CCAGTTTCCACGTGTACCAC+CGG 0.530828 7_2:+4952993 Msa1045450:five_prime_UTR
CCCACCAATAACATTACAAG+TGG 0.532297 7_2:+4957485 Msa1045450:three_prime_UTR
ATTATTGAAGCTCTCTTCAT+CGG 0.536063 7_2:-4955647 None:intergenic
GATAGCTACATAAGCACCAT+TGG 0.541145 7_2:+4955195 Msa1045450:CDS
TTAACACAAGTACTATACTT+AGG 0.541410 7_2:-4957007 None:intergenic
CACCAGAGTCTCCAATAAGA+AGG 0.544091 7_2:-4954239 None:intergenic
AACAGGATAAACAGTAGGTA+AGG 0.545457 7_2:-4957461 None:intergenic
AACCATCCGCAAACAATGCA+AGG 0.546517 7_2:+4956764 Msa1045450:CDS
TGGCTGCTGCCATCAAGGAT+AGG 0.548752 7_2:+4956006 Msa1045450:CDS
TAGCAGTACGAACTATAAAA+GGG 0.549651 7_2:+4957366 Msa1045450:three_prime_UTR
CAACGGAGAAGAGAAGAAGA+AGG 0.550308 7_2:-4952960 None:intergenic
TGTCCTAAATCGTTCTTGCC+CGG 0.552890 7_2:-4955480 None:intergenic
GAAATATTCATTGTTTCGGT+CGG 0.562856 7_2:-4957809 None:intergenic
TGCATAGTCATAAGATTGCA+TGG 0.568012 7_2:-4957259 None:intergenic
AAGTGTGGAGGAAGAGTGAT+CGG 0.569806 7_2:-4953018 None:intergenic
CCGAAAATCTATGATGCGGG+TGG 0.573871 7_2:+4957686 Msa1045450:three_prime_UTR
TAACCAGTAGCTACTATCGT+GGG 0.574293 7_2:+4955504 Msa1045450:CDS
GAACCGAAAATCTATGATGC+GGG 0.580438 7_2:+4957683 Msa1045450:three_prime_UTR
TTGAAGGTTCTTCTCAGTAG+GGG 0.583369 7_2:+4957620 Msa1045450:three_prime_UTR
TGCAAAGGATGCTACAAATG+TGG 0.595953 7_2:+4955965 Msa1045450:CDS
TAACTAGAAAGTATTTCACT+TGG 0.598822 7_2:+4956847 Msa1045450:exon
GTTGAATTGAATAATAACGA+AGG 0.599004 7_2:-4957561 None:intergenic
TGACAAGTAAATAAATAACA+AGG 0.599391 7_2:+4957141 Msa1045450:three_prime_UTR
CCACTTGTAATGTTATTGGT+GGG 0.600181 7_2:-4957485 None:intergenic
TTCAGGATTCATGACGGAGA+AGG 0.601819 7_2:-4953043 None:intergenic
TGGGTAACAGGATAAACAGT+AGG 0.604881 7_2:-4957466 None:intergenic
AAACTGGAATTGGGCACCAA+CGG 0.608236 7_2:-4952977 None:intergenic
ACGGAGAAGGTGAAGTGTGG+AGG 0.609394 7_2:-4953030 None:intergenic
ATCGGATCCGGTGGTACACG+TGG 0.609682 7_2:-4953000 None:intergenic
AAGGATGCTACAAATGTGGA+AGG 0.613051 7_2:+4955969 Msa1045450:CDS
CGAAAATCTATGATGCGGGT+GGG 0.613350 7_2:+4957687 Msa1045450:three_prime_UTR
CATGGCACGAATACATGAAG+TGG 0.614909 7_2:-4957241 None:intergenic
AGGCATAATAATATTAAATG+TGG 0.622328 7_2:-4957833 None:intergenic
ACTCACAAAATCAACTCCAA+TGG 0.624945 7_2:-4955211 None:intergenic
GGAAGGAGCATTCATGGCCA+TGG 0.628916 7_2:+4955986 Msa1045450:CDS
TAGTATTAGATATGAAACAC+AGG 0.635468 7_2:-4957853 None:intergenic
ATAACCAGTAGCTACTATCG+TGG 0.642124 7_2:+4955503 Msa1045450:CDS
ATGACGGAGAAGGTGAAGTG+TGG 0.648130 7_2:-4953033 None:intergenic
GCTTCAATAATGTGAAGCAG+TGG 0.652698 7_2:+4955659 Msa1045450:CDS
AAGTGAATTTGAATCTGACG+TGG 0.654711 7_2:-4957518 None:intergenic
GACAAGTAAATAAATAACAA+GGG 0.655812 7_2:+4957142 Msa1045450:three_prime_UTR
GGAAGAGTGATCGGATCCGG+TGG 0.657938 7_2:-4953009 None:intergenic
AAACCAATTCCCAAACCACA+CGG 0.659429 7_2:-4956939 None:intergenic
CGAACCGAAAATCTATGATG+CGG 0.660783 7_2:+4957682 Msa1045450:three_prime_UTR
CAGATTAGAGGACAACCAGT+TGG 0.660940 7_2:+4956799 Msa1045450:CDS
AACCAGTAGCTACTATCGTG+GGG 0.702592 7_2:+4955505 Msa1045450:CDS
TAACATTATCACTGGCATAG+CGG 0.705715 7_2:-4955696 None:intergenic
CCAATTCCCAAACCACACGG+TGG 0.708851 7_2:-4956936 None:intergenic
ATACTATTCAGGATTCATGA+CGG 0.723714 7_2:-4953049 None:intergenic
ATATTGCATAATCCACCGTG+TGG 0.726238 7_2:+4956924 Msa1045450:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGTTGTTTTTTTAATTT+GGG + chr7_2:4953197-4953216 Msa1045450:intron 10.0%
!!! ATGTAAAAATGTTTTTTTAA+TGG + chr7_2:4953659-4953678 Msa1045450:intron 10.0%
!! ATGTTAAAATTAAATTGAAA+AGG + chr7_2:4953697-4953716 Msa1045450:intron 10.0%
!!! AATTGTTGTTTTTTTAATTT+GGG + chr7_2:4953197-4953216 Msa1045450:intron 10.0%
!!! ATGTAAAAATGTTTTTTTAA+TGG + chr7_2:4953659-4953678 Msa1045450:intron 10.0%
!! ATGTTAAAATTAAATTGAAA+AGG + chr7_2:4953697-4953716 Msa1045450:intron 10.0%
!! AAAGTAGAAAAAAAAGAAAA+AGG - chr7_2:4953078-4953097 None:intergenic 15.0%
!!! TTTTGTTCTTGTTTTTTAAA+AGG + chr7_2:4953146-4953165 Msa1045450:intron 15.0%
!!! TTTGTTCTTGTTTTTTAAAA+GGG + chr7_2:4953147-4953166 Msa1045450:intron 15.0%
!!! GAATTGTTGTTTTTTTAATT+TGG + chr7_2:4953196-4953215 Msa1045450:intron 15.0%
!!! ATTGTTGTTTTTTTAATTTG+GGG + chr7_2:4953198-4953217 Msa1045450:intron 15.0%
!!! ATTTTATGTTTTTCAAAACA+TGG + chr7_2:4953455-4953474 Msa1045450:intron 15.0%
!! AAAATAAAATACTGCAATAT+AGG - chr7_2:4954322-4954341 None:intergenic 15.0%
!! AAATAAATAACCAGTATAAA+AGG - chr7_2:4954406-4954425 None:intergenic 15.0%
!! AAAGTAGAAAAAAAAGAAAA+AGG - chr7_2:4953078-4953097 None:intergenic 15.0%
!!! TTTTGTTCTTGTTTTTTAAA+AGG + chr7_2:4953146-4953165 Msa1045450:intron 15.0%
!!! TTTGTTCTTGTTTTTTAAAA+GGG + chr7_2:4953147-4953166 Msa1045450:intron 15.0%
!!! GAATTGTTGTTTTTTTAATT+TGG + chr7_2:4953196-4953215 Msa1045450:intron 15.0%
!!! ATTGTTGTTTTTTTAATTTG+GGG + chr7_2:4953198-4953217 Msa1045450:intron 15.0%
!!! ATTTTATGTTTTTCAAAACA+TGG + chr7_2:4953455-4953474 Msa1045450:intron 15.0%
!! AAAATAAAATACTGCAATAT+AGG - chr7_2:4954322-4954341 None:intergenic 15.0%
!! AAATAAATAACCAGTATAAA+AGG - chr7_2:4954406-4954425 None:intergenic 15.0%
!! ACGTATTATTATGAATGATT+TGG - chr7_2:4952854-4952873 None:intergenic 20.0%
!!! GTTGAATTAAAGCTTTAATA+CGG - chr7_2:4952879-4952898 None:intergenic 20.0%
!!! GTTTTGAATTAAAATTTGTG+TGG - chr7_2:4952912-4952931 None:intergenic 20.0%
!!! TTTTTAATTTGGGGTTAATT+TGG + chr7_2:4953207-4953226 Msa1045450:intron 20.0%
!! ACAACAACAAAAATCATAAA+AGG - chr7_2:4953288-4953307 None:intergenic 20.0%
!!! TTTTGTTGTTGTTTTTCAAA+AGG + chr7_2:4953296-4953315 Msa1045450:intron 20.0%
!!! TTTGTTGTTGTTTTTCAAAA+GGG + chr7_2:4953297-4953316 Msa1045450:intron 20.0%
!! ATGGTTTGAATTATTTCAAT+TGG + chr7_2:4953758-4953777 Msa1045450:intron 20.0%
!! TAAGACTACTGTTTAAAAAT+TGG + chr7_2:4953846-4953865 Msa1045450:intron 20.0%
!! CAGAATAATCAAATCTATAA+TGG + chr7_2:4954631-4954650 Msa1045450:intron 20.0%
!! AATAATCAAATCTATAATGG+AGG + chr7_2:4954634-4954653 Msa1045450:intron 20.0%
!!! ATAATCAAATCTATAATGGA+GGG + chr7_2:4954635-4954654 Msa1045450:intron 20.0%
!!! AACTATCAAATCTATTTTGT+AGG + chr7_2:4954658-4954677 Msa1045450:intron 20.0%
!! GTTGAATTAAATCTATGAAT+GGG + chr7_2:4954783-4954802 Msa1045450:intron 20.0%
!! TTAACTTTATGATATACTAC+AGG + chr7_2:4955158-4955177 Msa1045450:intron 20.0%
!! AAAACATAGTAGTGTATATT+AGG - chr7_2:4955435-4955454 None:intergenic 20.0%
!! ATCAGCTATTCAATAATAAA+CGG - chr7_2:4956044-4956063 None:intergenic 20.0%
!!! GAAATGTACTATGATTTTTT+TGG + chr7_2:4956457-4956476 Msa1045450:intron 20.0%
!!! TACTATGATTTTTTTGGATT+TGG + chr7_2:4956463-4956482 Msa1045450:intron 20.0%
!!! TTAGATTTCAATGCATATTT+TGG + chr7_2:4956560-4956579 Msa1045450:intron 20.0%
!!! TTTTGTTTAAAACTGACATA+CGG + chr7_2:4956583-4956602 Msa1045450:intron 20.0%
!! TAACAAATCTTACATGAAAA+GGG - chr7_2:4956884-4956903 None:intergenic 20.0%
!! ATAACAAATCTTACATGAAA+AGG - chr7_2:4956885-4956904 None:intergenic 20.0%
!! TTAAAGTGTATGTAAAGAAT+GGG - chr7_2:4956975-4956994 None:intergenic 20.0%
!! ATTAAAGTGTATGTAAAGAA+TGG - chr7_2:4956976-4956995 None:intergenic 20.0%
!! ATTCTTTACATACACTTTAA+TGG + chr7_2:4956975-4956994 Msa1045450:three_prime_UTR 20.0%
!! TGACAAGTAAATAAATAACA+AGG + chr7_2:4957141-4957160 Msa1045450:three_prime_UTR 20.0%
!! GACAAGTAAATAAATAACAA+GGG + chr7_2:4957142-4957161 Msa1045450:three_prime_UTR 20.0%
!!! TACTGCTATAATTTTTATGA+TGG - chr7_2:4957354-4957373 None:intergenic 20.0%
!! GAAATATCCTATAAATAAAG+AGG + chr7_2:4957419-4957438 Msa1045450:three_prime_UTR 20.0%
!! AGGCATAATAATATTAAATG+TGG - chr7_2:4957836-4957855 None:intergenic 20.0%
!! ACGTATTATTATGAATGATT+TGG - chr7_2:4952854-4952873 None:intergenic 20.0%
!!! GTTGAATTAAAGCTTTAATA+CGG - chr7_2:4952879-4952898 None:intergenic 20.0%
!!! GTTTTGAATTAAAATTTGTG+TGG - chr7_2:4952912-4952931 None:intergenic 20.0%
!!! TTTTTAATTTGGGGTTAATT+TGG + chr7_2:4953207-4953226 Msa1045450:intron 20.0%
!! ACAACAACAAAAATCATAAA+AGG - chr7_2:4953288-4953307 None:intergenic 20.0%
!!! TTTTGTTGTTGTTTTTCAAA+AGG + chr7_2:4953296-4953315 Msa1045450:intron 20.0%
!!! TTTGTTGTTGTTTTTCAAAA+GGG + chr7_2:4953297-4953316 Msa1045450:intron 20.0%
!! ATGGTTTGAATTATTTCAAT+TGG + chr7_2:4953758-4953777 Msa1045450:intron 20.0%
!! TAAGACTACTGTTTAAAAAT+TGG + chr7_2:4953846-4953865 Msa1045450:intron 20.0%
!! CAGAATAATCAAATCTATAA+TGG + chr7_2:4954631-4954650 Msa1045450:intron 20.0%
!! AATAATCAAATCTATAATGG+AGG + chr7_2:4954634-4954653 Msa1045450:intron 20.0%
!!! ATAATCAAATCTATAATGGA+GGG + chr7_2:4954635-4954654 Msa1045450:intron 20.0%
!!! AACTATCAAATCTATTTTGT+AGG + chr7_2:4954658-4954677 Msa1045450:intron 20.0%
!! GTTGAATTAAATCTATGAAT+GGG + chr7_2:4954783-4954802 Msa1045450:intron 20.0%
!! TTAACTTTATGATATACTAC+AGG + chr7_2:4955158-4955177 Msa1045450:intron 20.0%
!! AAAACATAGTAGTGTATATT+AGG - chr7_2:4955435-4955454 None:intergenic 20.0%
!! ATCAGCTATTCAATAATAAA+CGG - chr7_2:4956044-4956063 None:intergenic 20.0%
!!! GAAATGTACTATGATTTTTT+TGG + chr7_2:4956457-4956476 Msa1045450:intron 20.0%
!!! TACTATGATTTTTTTGGATT+TGG + chr7_2:4956463-4956482 Msa1045450:intron 20.0%
!!! TTAGATTTCAATGCATATTT+TGG + chr7_2:4956560-4956579 Msa1045450:intron 20.0%
!!! TTTTGTTTAAAACTGACATA+CGG + chr7_2:4956583-4956602 Msa1045450:intron 20.0%
!! TAACAAATCTTACATGAAAA+GGG - chr7_2:4956884-4956903 None:intergenic 20.0%
!! ATAACAAATCTTACATGAAA+AGG - chr7_2:4956885-4956904 None:intergenic 20.0%
!! TTAAAGTGTATGTAAAGAAT+GGG - chr7_2:4956975-4956994 None:intergenic 20.0%
!! ATTAAAGTGTATGTAAAGAA+TGG - chr7_2:4956976-4956995 None:intergenic 20.0%
!! ATTCTTTACATACACTTTAA+TGG + chr7_2:4956975-4956994 Msa1045450:three_prime_UTR 20.0%
!! TGACAAGTAAATAAATAACA+AGG + chr7_2:4957141-4957160 Msa1045450:three_prime_UTR 20.0%
!! GACAAGTAAATAAATAACAA+GGG + chr7_2:4957142-4957161 Msa1045450:three_prime_UTR 20.0%
!!! TACTGCTATAATTTTTATGA+TGG - chr7_2:4957354-4957373 None:intergenic 20.0%
!! GAAATATCCTATAAATAAAG+AGG + chr7_2:4957419-4957438 Msa1045450:three_prime_UTR 20.0%
!! AGGCATAATAATATTAAATG+TGG - chr7_2:4957836-4957855 None:intergenic 20.0%
! TTTCAATTGGAATTTCATCA+CGG + chr7_2:4953771-4953790 Msa1045450:intron 25.0%
! CAAAACTATGATAGTACTAT+TGG + chr7_2:4953801-4953820 Msa1045450:intron 25.0%
! AAGTGATTGTGTTTGATATT+TGG + chr7_2:4954120-4954139 Msa1045450:intron 25.0%
! AGTTTATCTCTATAGAGAAA+CGG + chr7_2:4954169-4954188 Msa1045450:intron 25.0%
! AAATAACCAGTATAAAAGGA+TGG - chr7_2:4954402-4954421 None:intergenic 25.0%
! ACATAACAACAAAATCAATG+GGG - chr7_2:4954457-4954476 None:intergenic 25.0%
! GACATAACAACAAAATCAAT+GGG - chr7_2:4954458-4954477 None:intergenic 25.0%
! AGACATAACAACAAAATCAA+TGG - chr7_2:4954459-4954478 None:intergenic 25.0%
! TTAACATTGAATGAGTGTAA+TGG + chr7_2:4954485-4954504 Msa1045450:intron 25.0%
! TAACATTGAATGAGTGTAAT+GGG + chr7_2:4954486-4954505 Msa1045450:intron 25.0%
! GGTTGAATTAAATCTATGAA+TGG + chr7_2:4954782-4954801 Msa1045450:intron 25.0%
!! AAATCTATGAATGGGATTTT+TGG + chr7_2:4954791-4954810 Msa1045450:intron 25.0%
! TTTGCTAAATCATAAACTCA+AGG - chr7_2:4955006-4955025 None:intergenic 25.0%
! ATGATATTATAAGTTCAGAC+TGG - chr7_2:4955285-4955304 None:intergenic 25.0%
! AGATTGTATGTATCTTAGAT+TGG + chr7_2:4955362-4955381 Msa1045450:intron 25.0%
! CATGTTTAAACTCTTTATTG+TGG - chr7_2:4955561-4955580 None:intergenic 25.0%
! CACAATAAAGAGTTTAAACA+TGG + chr7_2:4955559-4955578 Msa1045450:intron 25.0%
!!! TGATAATGTTAACAAGCTTT+TGG + chr7_2:4955708-4955727 Msa1045450:CDS 25.0%
! TCAGCTATTCAATAATAAAC+GGG - chr7_2:4956043-4956062 None:intergenic 25.0%
!!! TATTCTTTCTGGAAGTTTTA+AGG - chr7_2:4956126-4956145 None:intergenic 25.0%
! TAAAGTTTGGTTATTCTTTC+TGG - chr7_2:4956137-4956156 None:intergenic 25.0%
! TAACAATGTCAAGTAAAGTT+TGG - chr7_2:4956150-4956169 None:intergenic 25.0%
!! TATTGTGAACTGATTCATAA+TGG + chr7_2:4956387-4956406 Msa1045450:intron 25.0%
!!! AAACTTTTAAAATCAAGCTC+AGG - chr7_2:4956422-4956441 None:intergenic 25.0%
!! TTTGTTTAAAACTGACATAC+GGG + chr7_2:4956584-4956603 Msa1045450:intron 25.0%
! ATTCATGATGAAGTTAAACA+AGG - chr7_2:4956729-4956748 None:intergenic 25.0%
!!! AAGTGAAATACTTTCTAGTT+AGG - chr7_2:4956848-4956867 None:intergenic 25.0%
!!! TAACTAGAAAGTATTTCACT+TGG + chr7_2:4956847-4956866 Msa1045450:exon 25.0%
!! TTTGTTATGTCACTAAATAG+TGG + chr7_2:4956897-4956916 Msa1045450:three_prime_UTR 25.0%
! TTAACACAAGTACTATACTT+AGG - chr7_2:4957010-4957029 None:intergenic 25.0%
!!! GTTTTCTCCTCTTTATTTAT+AGG - chr7_2:4957429-4957448 None:intergenic 25.0%
! TAATCCACTTGTAATGTTAT+TGG - chr7_2:4957492-4957511 None:intergenic 25.0%
! TGAATAATAACGAAGGTTAA+CGG - chr7_2:4957557-4957576 None:intergenic 25.0%
! GTTGAATTGAATAATAACGA+AGG - chr7_2:4957564-4957583 None:intergenic 25.0%
! TGGTGAAATATTCATTGTTT+CGG - chr7_2:4957816-4957835 None:intergenic 25.0%
! TAGTATTAGATATGAAACAC+AGG - chr7_2:4957856-4957875 None:intergenic 25.0%
! TTTCAATTGGAATTTCATCA+CGG + chr7_2:4953771-4953790 Msa1045450:intron 25.0%
! CAAAACTATGATAGTACTAT+TGG + chr7_2:4953801-4953820 Msa1045450:intron 25.0%
! AAGTGATTGTGTTTGATATT+TGG + chr7_2:4954120-4954139 Msa1045450:intron 25.0%
! AGTTTATCTCTATAGAGAAA+CGG + chr7_2:4954169-4954188 Msa1045450:intron 25.0%
! AAATAACCAGTATAAAAGGA+TGG - chr7_2:4954402-4954421 None:intergenic 25.0%
! ACATAACAACAAAATCAATG+GGG - chr7_2:4954457-4954476 None:intergenic 25.0%
! GACATAACAACAAAATCAAT+GGG - chr7_2:4954458-4954477 None:intergenic 25.0%
! AGACATAACAACAAAATCAA+TGG - chr7_2:4954459-4954478 None:intergenic 25.0%
! TTAACATTGAATGAGTGTAA+TGG + chr7_2:4954485-4954504 Msa1045450:intron 25.0%
! TAACATTGAATGAGTGTAAT+GGG + chr7_2:4954486-4954505 Msa1045450:intron 25.0%
! GGTTGAATTAAATCTATGAA+TGG + chr7_2:4954782-4954801 Msa1045450:intron 25.0%
!! AAATCTATGAATGGGATTTT+TGG + chr7_2:4954791-4954810 Msa1045450:intron 25.0%
! TTTGCTAAATCATAAACTCA+AGG - chr7_2:4955006-4955025 None:intergenic 25.0%
! ATGATATTATAAGTTCAGAC+TGG - chr7_2:4955285-4955304 None:intergenic 25.0%
! AGATTGTATGTATCTTAGAT+TGG + chr7_2:4955362-4955381 Msa1045450:intron 25.0%
! CATGTTTAAACTCTTTATTG+TGG - chr7_2:4955561-4955580 None:intergenic 25.0%
! CACAATAAAGAGTTTAAACA+TGG + chr7_2:4955559-4955578 Msa1045450:intron 25.0%
!!! TGATAATGTTAACAAGCTTT+TGG + chr7_2:4955708-4955727 Msa1045450:CDS 25.0%
! TCAGCTATTCAATAATAAAC+GGG - chr7_2:4956043-4956062 None:intergenic 25.0%
!!! TATTCTTTCTGGAAGTTTTA+AGG - chr7_2:4956126-4956145 None:intergenic 25.0%
! TAAAGTTTGGTTATTCTTTC+TGG - chr7_2:4956137-4956156 None:intergenic 25.0%
! TAACAATGTCAAGTAAAGTT+TGG - chr7_2:4956150-4956169 None:intergenic 25.0%
!! TATTGTGAACTGATTCATAA+TGG + chr7_2:4956387-4956406 Msa1045450:intron 25.0%
!!! AAACTTTTAAAATCAAGCTC+AGG - chr7_2:4956422-4956441 None:intergenic 25.0%
!! TTTGTTTAAAACTGACATAC+GGG + chr7_2:4956584-4956603 Msa1045450:intron 25.0%
! ATTCATGATGAAGTTAAACA+AGG - chr7_2:4956729-4956748 None:intergenic 25.0%
!!! AAGTGAAATACTTTCTAGTT+AGG - chr7_2:4956848-4956867 None:intergenic 25.0%
!!! TAACTAGAAAGTATTTCACT+TGG + chr7_2:4956847-4956866 Msa1045450:exon 25.0%
!! TTTGTTATGTCACTAAATAG+TGG + chr7_2:4956897-4956916 Msa1045450:three_prime_UTR 25.0%
! TTAACACAAGTACTATACTT+AGG - chr7_2:4957010-4957029 None:intergenic 25.0%
!!! GTTTTCTCCTCTTTATTTAT+AGG - chr7_2:4957429-4957448 None:intergenic 25.0%
! TAATCCACTTGTAATGTTAT+TGG - chr7_2:4957492-4957511 None:intergenic 25.0%
! TGAATAATAACGAAGGTTAA+CGG - chr7_2:4957557-4957576 None:intergenic 25.0%
! GTTGAATTGAATAATAACGA+AGG - chr7_2:4957564-4957583 None:intergenic 25.0%
! TGGTGAAATATTCATTGTTT+CGG - chr7_2:4957816-4957835 None:intergenic 25.0%
! TAGTATTAGATATGAAACAC+AGG - chr7_2:4957856-4957875 None:intergenic 25.0%
ATACTATTCAGGATTCATGA+CGG - chr7_2:4953052-4953071 None:intergenic 30.0%
! GAAAAAGGTACATACTATTC+AGG - chr7_2:4953063-4953082 None:intergenic 30.0%
!!! TGTTTTTTACAACCCTAGAT+TGG + chr7_2:4953392-4953411 Msa1045450:intron 30.0%
ACCTTGATATTGTGTCTAAT+TGG + chr7_2:4953537-4953556 Msa1045450:intron 30.0%
ACCAATTAGACACAATATCA+AGG - chr7_2:4953541-4953560 None:intergenic 30.0%
TTGCATGATACAAACCTTAA+TGG + chr7_2:4953731-4953750 Msa1045450:intron 30.0%
TACAAACCTTAATGGAATCA+TGG + chr7_2:4953739-4953758 Msa1045450:intron 30.0%
TTCAAACCATGATTCCATTA+AGG - chr7_2:4953748-4953767 None:intergenic 30.0%
GACTACTGTTTAAAAATTGG+TGG + chr7_2:4953849-4953868 Msa1045450:intron 30.0%
TTACAGCAAATCTTAGAAGA+AGG - chr7_2:4954278-4954297 None:intergenic 30.0%
TATAAAAGGATGGAGAAACA+TGG - chr7_2:4954392-4954411 None:intergenic 30.0%
AACATTGAATGAGTGTAATG+GGG + chr7_2:4954487-4954506 Msa1045450:intron 30.0%
GTTAAATGTGAACGAAGAAA+AGG + chr7_2:4954546-4954565 Msa1045450:intron 30.0%
AATAGAATCTACAGGTTGTA+AGG + chr7_2:4954699-4954718 Msa1045450:intron 30.0%
CAAGACATAGAAGATGATAA+TGG - chr7_2:4954880-4954899 None:intergenic 30.0%
TGATATTTCCTCAAGATCTA+TGG - chr7_2:4954941-4954960 None:intergenic 30.0%
ATAGATCTTGAGGAAATATC+AGG + chr7_2:4954940-4954959 Msa1045450:intron 30.0%
TTTAGCAAAATCGTCTTATC+TGG + chr7_2:4955017-4955036 Msa1045450:intron 30.0%
! TATTTTGTGCTGTGTATTTC+TGG + chr7_2:4955063-4955082 Msa1045450:intron 30.0%
! TGATTTTGCTTGAACTCATT+TGG + chr7_2:4955249-4955268 Msa1045450:intron 30.0%
! TTTTGATCTGTTCTTGTAGT+GGG + chr7_2:4955451-4955470 Msa1045450:intron 30.0%
TAGAGAATGAAAAACACAAC+CGG - chr7_2:4955591-4955610 None:intergenic 30.0%
ATTATTGAAGCTCTCTTCAT+CGG - chr7_2:4955650-4955669 None:intergenic 30.0%
!! AAGCTTGTTAACATTATCAC+TGG - chr7_2:4955707-4955726 None:intergenic 30.0%
! AATGTTAACAAGCTTTTGGT+TGG + chr7_2:4955712-4955731 Msa1045450:CDS 30.0%
TTTGCACTTGTTTCCATAAA+AGG - chr7_2:4955951-4955970 None:intergenic 30.0%
! TTTTATGGAAACAAGTGCAA+AGG + chr7_2:4955950-4955969 Msa1045450:CDS 30.0%
!!! GTTGATTTTTTCGAAAGCTT+TGG - chr7_2:4956326-4956345 None:intergenic 30.0%
TTGTTCAGTAGTGAAAAAGT+CGG - chr7_2:4956695-4956714 None:intergenic 30.0%
ACTTCATCATGAATGTAGAA+TGG + chr7_2:4956735-4956754 Msa1045450:intron 30.0%
ATGTATACATGAAGTTCGTA+TGG - chr7_2:4957182-4957201 None:intergenic 30.0%
ATAGCAGTACGAACTATAAA+AGG + chr7_2:4957365-4957384 Msa1045450:three_prime_UTR 30.0%
TAGCAGTACGAACTATAAAA+GGG + chr7_2:4957366-4957385 Msa1045450:three_prime_UTR 30.0%
ATGGAAAAAACGAGTATGTA+TGG + chr7_2:4957735-4957754 Msa1045450:three_prime_UTR 30.0%
TGGAAAAAACGAGTATGTAT+GGG + chr7_2:4957736-4957755 Msa1045450:three_prime_UTR 30.0%
GAAATATTCATTGTTTCGGT+CGG - chr7_2:4957812-4957831 None:intergenic 30.0%
ATACTATTCAGGATTCATGA+CGG - chr7_2:4953052-4953071 None:intergenic 30.0%
! GAAAAAGGTACATACTATTC+AGG - chr7_2:4953063-4953082 None:intergenic 30.0%
!!! TGTTTTTTACAACCCTAGAT+TGG + chr7_2:4953392-4953411 Msa1045450:intron 30.0%
ACCTTGATATTGTGTCTAAT+TGG + chr7_2:4953537-4953556 Msa1045450:intron 30.0%
ACCAATTAGACACAATATCA+AGG - chr7_2:4953541-4953560 None:intergenic 30.0%
TTGCATGATACAAACCTTAA+TGG + chr7_2:4953731-4953750 Msa1045450:intron 30.0%
TACAAACCTTAATGGAATCA+TGG + chr7_2:4953739-4953758 Msa1045450:intron 30.0%
TTCAAACCATGATTCCATTA+AGG - chr7_2:4953748-4953767 None:intergenic 30.0%
GACTACTGTTTAAAAATTGG+TGG + chr7_2:4953849-4953868 Msa1045450:intron 30.0%
TTACAGCAAATCTTAGAAGA+AGG - chr7_2:4954278-4954297 None:intergenic 30.0%
TATAAAAGGATGGAGAAACA+TGG - chr7_2:4954392-4954411 None:intergenic 30.0%
AACATTGAATGAGTGTAATG+GGG + chr7_2:4954487-4954506 Msa1045450:intron 30.0%
GTTAAATGTGAACGAAGAAA+AGG + chr7_2:4954546-4954565 Msa1045450:intron 30.0%
AATAGAATCTACAGGTTGTA+AGG + chr7_2:4954699-4954718 Msa1045450:intron 30.0%
CAAGACATAGAAGATGATAA+TGG - chr7_2:4954880-4954899 None:intergenic 30.0%
TGATATTTCCTCAAGATCTA+TGG - chr7_2:4954941-4954960 None:intergenic 30.0%
ATAGATCTTGAGGAAATATC+AGG + chr7_2:4954940-4954959 Msa1045450:intron 30.0%
TTTAGCAAAATCGTCTTATC+TGG + chr7_2:4955017-4955036 Msa1045450:intron 30.0%
! TATTTTGTGCTGTGTATTTC+TGG + chr7_2:4955063-4955082 Msa1045450:intron 30.0%
! TGATTTTGCTTGAACTCATT+TGG + chr7_2:4955249-4955268 Msa1045450:intron 30.0%
! TTTTGATCTGTTCTTGTAGT+GGG + chr7_2:4955451-4955470 Msa1045450:intron 30.0%
TAGAGAATGAAAAACACAAC+CGG - chr7_2:4955591-4955610 None:intergenic 30.0%
ATTATTGAAGCTCTCTTCAT+CGG - chr7_2:4955650-4955669 None:intergenic 30.0%
!! AAGCTTGTTAACATTATCAC+TGG - chr7_2:4955707-4955726 None:intergenic 30.0%
! AATGTTAACAAGCTTTTGGT+TGG + chr7_2:4955712-4955731 Msa1045450:CDS 30.0%
TTTGCACTTGTTTCCATAAA+AGG - chr7_2:4955951-4955970 None:intergenic 30.0%
! TTTTATGGAAACAAGTGCAA+AGG + chr7_2:4955950-4955969 Msa1045450:CDS 30.0%
!!! GTTGATTTTTTCGAAAGCTT+TGG - chr7_2:4956326-4956345 None:intergenic 30.0%
TTGTTCAGTAGTGAAAAAGT+CGG - chr7_2:4956695-4956714 None:intergenic 30.0%
ACTTCATCATGAATGTAGAA+TGG + chr7_2:4956735-4956754 Msa1045450:intron 30.0%
ATGTATACATGAAGTTCGTA+TGG - chr7_2:4957182-4957201 None:intergenic 30.0%
ATAGCAGTACGAACTATAAA+AGG + chr7_2:4957365-4957384 Msa1045450:three_prime_UTR 30.0%
TAGCAGTACGAACTATAAAA+GGG + chr7_2:4957366-4957385 Msa1045450:three_prime_UTR 30.0%
ATGGAAAAAACGAGTATGTA+TGG + chr7_2:4957735-4957754 Msa1045450:three_prime_UTR 30.0%
TGGAAAAAACGAGTATGTAT+GGG + chr7_2:4957736-4957755 Msa1045450:three_prime_UTR 30.0%
GAAATATTCATTGTTTCGGT+CGG - chr7_2:4957812-4957831 None:intergenic 30.0%
AACTAAAGCATGCATGCATA+TGG + chr7_2:4953585-4953604 Msa1045450:intron 35.0%
TGAACAGATAATCACTGCAA+AGG - chr7_2:4954215-4954234 None:intergenic 35.0%
! GTTTCTCCATCCTTTTATAC+TGG + chr7_2:4954393-4954412 Msa1045450:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr7_2:4954586-4954605 Msa1045450:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr7_2:4954605-4954624 Msa1045450:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr7_2:4954586-4954605 Msa1045450:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr7_2:4954605-4954624 Msa1045450:intron 35.0%
!! TCTATGAATGGGATTTTTGG+AGG + chr7_2:4954794-4954813 Msa1045450:intron 35.0%
TAGTTTCTCCATAGATCTTG+AGG + chr7_2:4954930-4954949 Msa1045450:intron 35.0%
TGTATTGTGCAGCAGTATTA+TGG - chr7_2:4955125-4955144 None:intergenic 35.0%
ACTCACAAAATCAACTCCAA+TGG - chr7_2:4955214-4955233 None:intergenic 35.0%
!! GTTTTGATCTGTTCTTGTAG+TGG + chr7_2:4955450-4955469 Msa1045450:intron 35.0%
AGTTTAAACATGGAACACTC+CGG + chr7_2:4955569-4955588 Msa1045450:intron 35.0%
TCTCTAATAACGTGTTCCTT+TGG + chr7_2:4955605-4955624 Msa1045450:intron 35.0%
CATCATAAACAATCTGCCAA+AGG - chr7_2:4955624-4955643 None:intergenic 35.0%
TAACATTATCACTGGCATAG+CGG - chr7_2:4955699-4955718 None:intergenic 35.0%
! AGAGAGAAAAAAAGAGTGTG+AGG - chr7_2:4955897-4955916 None:intergenic 35.0%
!!! TCTTTTTTTCTCTCTATCGC+AGG + chr7_2:4955902-4955921 Msa1045450:intron 35.0%
CAGGAATTTGCAGATCAAAT+CGG + chr7_2:4955921-4955940 Msa1045450:intron 35.0%
! TCAAATCGGCATACCTTTTA+TGG + chr7_2:4955935-4955954 Msa1045450:CDS 35.0%
AAGGCATGGTACATTAAACT+TGG - chr7_2:4956089-4956108 None:intergenic 35.0%
TGTTCAGTAGTGAAAAAGTC+GGG - chr7_2:4956694-4956713 None:intergenic 35.0%
AACCAGTTGGTCAAAAAAGT+GGG + chr7_2:4956812-4956831 Msa1045450:CDS 35.0%
! TTTCTTTTGCTCAGTTGCTT+TGG + chr7_2:4957091-4957110 Msa1045450:three_prime_UTR 35.0%
TGCATAGTCATAAGATTGCA+TGG - chr7_2:4957262-4957281 None:intergenic 35.0%
AACAGGATAAACAGTAGGTA+AGG - chr7_2:4957464-4957483 None:intergenic 35.0%
! TAATGTTATTGGTGGGTAAC+AGG - chr7_2:4957481-4957500 None:intergenic 35.0%
CCACTTGTAATGTTATTGGT+GGG - chr7_2:4957488-4957507 None:intergenic 35.0%
TCCACTTGTAATGTTATTGG+TGG - chr7_2:4957489-4957508 None:intergenic 35.0%
AAGTGAATTTGAATCTGACG+TGG - chr7_2:4957521-4957540 None:intergenic 35.0%
! GTGACAATACTTTTGTTCAG+AGG - chr7_2:4957879-4957898 None:intergenic 35.0%
AACTAAAGCATGCATGCATA+TGG + chr7_2:4953585-4953604 Msa1045450:intron 35.0%
TGAACAGATAATCACTGCAA+AGG - chr7_2:4954215-4954234 None:intergenic 35.0%
! GTTTCTCCATCCTTTTATAC+TGG + chr7_2:4954393-4954412 Msa1045450:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr7_2:4954586-4954605 Msa1045450:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr7_2:4954605-4954624 Msa1045450:intron 35.0%
!! TTTTGTAGGAGAAGTGTGTA+AGG + chr7_2:4954586-4954605 Msa1045450:intron 35.0%
AAGGTAGGAATAGAATCTAC+AGG + chr7_2:4954605-4954624 Msa1045450:intron 35.0%
!! TCTATGAATGGGATTTTTGG+AGG + chr7_2:4954794-4954813 Msa1045450:intron 35.0%
TAGTTTCTCCATAGATCTTG+AGG + chr7_2:4954930-4954949 Msa1045450:intron 35.0%
TGTATTGTGCAGCAGTATTA+TGG - chr7_2:4955125-4955144 None:intergenic 35.0%
ACTCACAAAATCAACTCCAA+TGG - chr7_2:4955214-4955233 None:intergenic 35.0%
!! GTTTTGATCTGTTCTTGTAG+TGG + chr7_2:4955450-4955469 Msa1045450:intron 35.0%
AGTTTAAACATGGAACACTC+CGG + chr7_2:4955569-4955588 Msa1045450:intron 35.0%
TCTCTAATAACGTGTTCCTT+TGG + chr7_2:4955605-4955624 Msa1045450:intron 35.0%
CATCATAAACAATCTGCCAA+AGG - chr7_2:4955624-4955643 None:intergenic 35.0%
TAACATTATCACTGGCATAG+CGG - chr7_2:4955699-4955718 None:intergenic 35.0%
! AGAGAGAAAAAAAGAGTGTG+AGG - chr7_2:4955897-4955916 None:intergenic 35.0%
!!! TCTTTTTTTCTCTCTATCGC+AGG + chr7_2:4955902-4955921 Msa1045450:intron 35.0%
CAGGAATTTGCAGATCAAAT+CGG + chr7_2:4955921-4955940 Msa1045450:intron 35.0%
! TCAAATCGGCATACCTTTTA+TGG + chr7_2:4955935-4955954 Msa1045450:CDS 35.0%
AAGGCATGGTACATTAAACT+TGG - chr7_2:4956089-4956108 None:intergenic 35.0%
TGTTCAGTAGTGAAAAAGTC+GGG - chr7_2:4956694-4956713 None:intergenic 35.0%
AACCAGTTGGTCAAAAAAGT+GGG + chr7_2:4956812-4956831 Msa1045450:CDS 35.0%
! TTTCTTTTGCTCAGTTGCTT+TGG + chr7_2:4957091-4957110 Msa1045450:three_prime_UTR 35.0%
TGCATAGTCATAAGATTGCA+TGG - chr7_2:4957262-4957281 None:intergenic 35.0%
AACAGGATAAACAGTAGGTA+AGG - chr7_2:4957464-4957483 None:intergenic 35.0%
! TAATGTTATTGGTGGGTAAC+AGG - chr7_2:4957481-4957500 None:intergenic 35.0%
CCACTTGTAATGTTATTGGT+GGG - chr7_2:4957488-4957507 None:intergenic 35.0%
TCCACTTGTAATGTTATTGG+TGG - chr7_2:4957489-4957508 None:intergenic 35.0%
AAGTGAATTTGAATCTGACG+TGG - chr7_2:4957521-4957540 None:intergenic 35.0%
! GTGACAATACTTTTGTTCAG+AGG - chr7_2:4957879-4957898 None:intergenic 35.0%
TACACGTGGAAACTGGAATT+GGG - chr7_2:4952989-4953008 None:intergenic 40.0%
CACAAAGCTGATCCAATCTA+GGG - chr7_2:4953407-4953426 None:intergenic 40.0%
TCACAAAGCTGATCCAATCT+AGG - chr7_2:4953408-4953427 None:intergenic 40.0%
! GTTGCTTCTTGTTTCTCACA+AGG + chr7_2:4953618-4953637 Msa1045450:intron 40.0%
CTGTTCAAGCTCCTTCTTAT+TGG + chr7_2:4954228-4954247 Msa1045450:CDS 40.0%
! TGTAATGGGGTTCTTGCTAT+TGG + chr7_2:4954500-4954519 Msa1045450:intron 40.0%
!! GTAATGGGGTTCTTGCTATT+GGG + chr7_2:4954501-4954520 Msa1045450:intron 40.0%
GTTCACATTTAACCGCACAT+TGG - chr7_2:4954539-4954558 None:intergenic 40.0%
GAACGAAGAAAAGGACATGA+CGG + chr7_2:4954555-4954574 Msa1045450:intron 40.0%
AACGAAGAAAAGGACATGAC+GGG + chr7_2:4954556-4954575 Msa1045450:intron 40.0%
! TGACGGGACAGAAATTTTGT+AGG + chr7_2:4954572-4954591 Msa1045450:intron 40.0%
GAATCTACAGGTTGTAAGGT+AGG + chr7_2:4954703-4954722 Msa1045450:intron 40.0%
!! TAAGGTAGGCATTGATGACA+TGG + chr7_2:4954717-4954736 Msa1045450:intron 40.0%
!! AATGGGATTTTTGGAGGCTT+AGG + chr7_2:4954800-4954819 Msa1045450:intron 40.0%
!! ATTTTTGGAGGCTTAGGCTT+TGG + chr7_2:4954806-4954825 Msa1045450:intron 40.0%
! GGCACTGAAGAACAAAGTTA+GGG - chr7_2:4954985-4955004 None:intergenic 40.0%
!! AGGCACTGAAGAACAAAGTT+AGG - chr7_2:4954986-4955005 None:intergenic 40.0%
!! TTGTGCTGTGTATTTCTGGA+AGG + chr7_2:4955067-4955086 Msa1045450:intron 40.0%
! GCAGTATTATGGAAGCGTAA+AGG - chr7_2:4955114-4955133 None:intergenic 40.0%
GATAGCTACATAAGCACCAT+TGG + chr7_2:4955195-4955214 Msa1045450:CDS 40.0%
GAAAATTCGAACTGTTGAGC+AGG + chr7_2:4955318-4955337 Msa1045450:intron 40.0%
ATAACCAGTAGCTACTATCG+TGG + chr7_2:4955503-4955522 Msa1045450:CDS 40.0%
TAACCAGTAGCTACTATCGT+GGG + chr7_2:4955504-4955523 Msa1045450:CDS 40.0%
GCTTCAATAATGTGAAGCAG+TGG + chr7_2:4955659-4955678 Msa1045450:CDS 40.0%
GTCTGTGTTCGTGTTTACTT+CGG + chr7_2:4955843-4955862 Msa1045450:intron 40.0%
! AAAAAGAGTGTGAGGTGTTC+TGG - chr7_2:4955889-4955908 None:intergenic 40.0%
TGCAAAGGATGCTACAAATG+TGG + chr7_2:4955965-4955984 Msa1045450:CDS 40.0%
AAGGATGCTACAAATGTGGA+AGG + chr7_2:4955969-4955988 Msa1045450:CDS 40.0%
!! AAATGTGGAAGGAGCATTCA+TGG + chr7_2:4955980-4955999 Msa1045450:CDS 40.0%
TAATGAGCACCTATCCTTGA+TGG - chr7_2:4956018-4956037 None:intergenic 40.0%
!! ATGTACCATGCCTTTGAAGT+AGG + chr7_2:4956095-4956114 Msa1045450:intron 40.0%
ATTGTTAGACCATCCCCAAT+GGG + chr7_2:4956163-4956182 Msa1045450:intron 40.0%
!! GGTCTCAAATTTTGAAGACC+TGG + chr7_2:4956188-4956207 Msa1045450:intron 40.0%
TTGAAGACCTGGTACCTATT+AGG + chr7_2:4956199-4956218 Msa1045450:intron 40.0%
AAAAACCTTTCTCCCCAATG+GGG - chr7_2:4956230-4956249 None:intergenic 40.0%
CAAAAACCTTTCTCCCCAAT+GGG - chr7_2:4956231-4956250 None:intergenic 40.0%
! CATTGGGGAGAAAGGTTTTT+GGG + chr7_2:4956230-4956249 Msa1045450:intron 40.0%
! ATTGGGGAGAAAGGTTTTTG+GGG + chr7_2:4956231-4956250 Msa1045450:intron 40.0%
AATGGAGACACCTAACATTG+GGG - chr7_2:4956286-4956305 None:intergenic 40.0%
CAATGGAGACACCTAACATT+GGG - chr7_2:4956287-4956306 None:intergenic 40.0%
ACAATGGAGACACCTAACAT+TGG - chr7_2:4956288-4956307 None:intergenic 40.0%
AATGTTAGGTGTCTCCATTG+TGG + chr7_2:4956287-4956306 Msa1045450:intron 40.0%
!! GAAACTAAGAGCATCCACAA+TGG - chr7_2:4956304-4956323 None:intergenic 40.0%
ATCCATACATTCATGCAGTC+AGG + chr7_2:4956503-4956522 Msa1045450:intron 40.0%
TCCATACATTCATGCAGTCA+GGG + chr7_2:4956504-4956523 Msa1045450:intron 40.0%
ACTGTCAGATATCGATCCAA+CGG - chr7_2:4956540-4956559 None:intergenic 40.0%
AAATCTGGACCGTCTAATCT+CGG + chr7_2:4956611-4956630 Msa1045450:intron 40.0%
ATTCATGCAGACAGAGATGT+CGG - chr7_2:4956648-4956667 None:intergenic 40.0%
CAACCAGTTGGTCAAAAAAG+TGG + chr7_2:4956811-4956830 Msa1045450:CDS 40.0%
!! CACGGTGGATTATGCAATAT+TGG - chr7_2:4956924-4956943 None:intergenic 40.0%
ATATTGCATAATCCACCGTG+TGG + chr7_2:4956924-4956943 Msa1045450:three_prime_UTR 40.0%
AAACCAATTCCCAAACCACA+CGG - chr7_2:4956942-4956961 None:intergenic 40.0%
TGGGTAACAGGATAAACAGT+AGG - chr7_2:4957469-4957488 None:intergenic 40.0%
CCCACCAATAACATTACAAG+TGG + chr7_2:4957485-4957504 Msa1045450:three_prime_UTR 40.0%
TTGACAGTACACTCTCTTGA+AGG + chr7_2:4957604-4957623 Msa1045450:three_prime_UTR 40.0%
TCTTGAAGGTTCTTCTCAGT+AGG + chr7_2:4957618-4957637 Msa1045450:three_prime_UTR 40.0%
CTTGAAGGTTCTTCTCAGTA+GGG + chr7_2:4957619-4957638 Msa1045450:three_prime_UTR 40.0%
TTGAAGGTTCTTCTCAGTAG+GGG + chr7_2:4957620-4957639 Msa1045450:three_prime_UTR 40.0%
!!! GATTTTCGGTTCGGATTTGA+CGG - chr7_2:4957675-4957694 None:intergenic 40.0%
! CGCATCATAGATTTTCGGTT+CGG - chr7_2:4957684-4957703 None:intergenic 40.0%
CGAACCGAAAATCTATGATG+CGG + chr7_2:4957682-4957701 Msa1045450:three_prime_UTR 40.0%
GAACCGAAAATCTATGATGC+GGG + chr7_2:4957683-4957702 Msa1045450:three_prime_UTR 40.0%
!!! CGGTTGTCGGGTTTTAAAAA+TGG + chr7_2:4957716-4957735 Msa1045450:three_prime_UTR 40.0%
! CGAGTATGTATGGGTTTTCA+CGG + chr7_2:4957745-4957764 Msa1045450:three_prime_UTR 40.0%
TACACGTGGAAACTGGAATT+GGG - chr7_2:4952989-4953008 None:intergenic 40.0%
CACAAAGCTGATCCAATCTA+GGG - chr7_2:4953407-4953426 None:intergenic 40.0%
TCACAAAGCTGATCCAATCT+AGG - chr7_2:4953408-4953427 None:intergenic 40.0%
! GTTGCTTCTTGTTTCTCACA+AGG + chr7_2:4953618-4953637 Msa1045450:intron 40.0%
CTGTTCAAGCTCCTTCTTAT+TGG + chr7_2:4954228-4954247 Msa1045450:CDS 40.0%
! TGTAATGGGGTTCTTGCTAT+TGG + chr7_2:4954500-4954519 Msa1045450:intron 40.0%
!! GTAATGGGGTTCTTGCTATT+GGG + chr7_2:4954501-4954520 Msa1045450:intron 40.0%
GTTCACATTTAACCGCACAT+TGG - chr7_2:4954539-4954558 None:intergenic 40.0%
GAACGAAGAAAAGGACATGA+CGG + chr7_2:4954555-4954574 Msa1045450:intron 40.0%
AACGAAGAAAAGGACATGAC+GGG + chr7_2:4954556-4954575 Msa1045450:intron 40.0%
! TGACGGGACAGAAATTTTGT+AGG + chr7_2:4954572-4954591 Msa1045450:intron 40.0%
GAATCTACAGGTTGTAAGGT+AGG + chr7_2:4954703-4954722 Msa1045450:intron 40.0%
!! TAAGGTAGGCATTGATGACA+TGG + chr7_2:4954717-4954736 Msa1045450:intron 40.0%
!! AATGGGATTTTTGGAGGCTT+AGG + chr7_2:4954800-4954819 Msa1045450:intron 40.0%
!! ATTTTTGGAGGCTTAGGCTT+TGG + chr7_2:4954806-4954825 Msa1045450:intron 40.0%
! GGCACTGAAGAACAAAGTTA+GGG - chr7_2:4954985-4955004 None:intergenic 40.0%
!! AGGCACTGAAGAACAAAGTT+AGG - chr7_2:4954986-4955005 None:intergenic 40.0%
!! TTGTGCTGTGTATTTCTGGA+AGG + chr7_2:4955067-4955086 Msa1045450:intron 40.0%
! GCAGTATTATGGAAGCGTAA+AGG - chr7_2:4955114-4955133 None:intergenic 40.0%
GATAGCTACATAAGCACCAT+TGG + chr7_2:4955195-4955214 Msa1045450:CDS 40.0%
GAAAATTCGAACTGTTGAGC+AGG + chr7_2:4955318-4955337 Msa1045450:intron 40.0%
ATAACCAGTAGCTACTATCG+TGG + chr7_2:4955503-4955522 Msa1045450:CDS 40.0%
TAACCAGTAGCTACTATCGT+GGG + chr7_2:4955504-4955523 Msa1045450:CDS 40.0%
GCTTCAATAATGTGAAGCAG+TGG + chr7_2:4955659-4955678 Msa1045450:CDS 40.0%
GTCTGTGTTCGTGTTTACTT+CGG + chr7_2:4955843-4955862 Msa1045450:intron 40.0%
! AAAAAGAGTGTGAGGTGTTC+TGG - chr7_2:4955889-4955908 None:intergenic 40.0%
TGCAAAGGATGCTACAAATG+TGG + chr7_2:4955965-4955984 Msa1045450:CDS 40.0%
AAGGATGCTACAAATGTGGA+AGG + chr7_2:4955969-4955988 Msa1045450:CDS 40.0%
!! AAATGTGGAAGGAGCATTCA+TGG + chr7_2:4955980-4955999 Msa1045450:CDS 40.0%
TAATGAGCACCTATCCTTGA+TGG - chr7_2:4956018-4956037 None:intergenic 40.0%
!! ATGTACCATGCCTTTGAAGT+AGG + chr7_2:4956095-4956114 Msa1045450:intron 40.0%
ATTGTTAGACCATCCCCAAT+GGG + chr7_2:4956163-4956182 Msa1045450:intron 40.0%
!! GGTCTCAAATTTTGAAGACC+TGG + chr7_2:4956188-4956207 Msa1045450:intron 40.0%
TTGAAGACCTGGTACCTATT+AGG + chr7_2:4956199-4956218 Msa1045450:intron 40.0%
AAAAACCTTTCTCCCCAATG+GGG - chr7_2:4956230-4956249 None:intergenic 40.0%
CAAAAACCTTTCTCCCCAAT+GGG - chr7_2:4956231-4956250 None:intergenic 40.0%
! CATTGGGGAGAAAGGTTTTT+GGG + chr7_2:4956230-4956249 Msa1045450:intron 40.0%
! ATTGGGGAGAAAGGTTTTTG+GGG + chr7_2:4956231-4956250 Msa1045450:intron 40.0%
AATGGAGACACCTAACATTG+GGG - chr7_2:4956286-4956305 None:intergenic 40.0%
CAATGGAGACACCTAACATT+GGG - chr7_2:4956287-4956306 None:intergenic 40.0%
ACAATGGAGACACCTAACAT+TGG - chr7_2:4956288-4956307 None:intergenic 40.0%
AATGTTAGGTGTCTCCATTG+TGG + chr7_2:4956287-4956306 Msa1045450:intron 40.0%
!! GAAACTAAGAGCATCCACAA+TGG - chr7_2:4956304-4956323 None:intergenic 40.0%
ATCCATACATTCATGCAGTC+AGG + chr7_2:4956503-4956522 Msa1045450:intron 40.0%
TCCATACATTCATGCAGTCA+GGG + chr7_2:4956504-4956523 Msa1045450:intron 40.0%
ACTGTCAGATATCGATCCAA+CGG - chr7_2:4956540-4956559 None:intergenic 40.0%
AAATCTGGACCGTCTAATCT+CGG + chr7_2:4956611-4956630 Msa1045450:intron 40.0%
ATTCATGCAGACAGAGATGT+CGG - chr7_2:4956648-4956667 None:intergenic 40.0%
CAACCAGTTGGTCAAAAAAG+TGG + chr7_2:4956811-4956830 Msa1045450:CDS 40.0%
!! CACGGTGGATTATGCAATAT+TGG - chr7_2:4956924-4956943 None:intergenic 40.0%
ATATTGCATAATCCACCGTG+TGG + chr7_2:4956924-4956943 Msa1045450:three_prime_UTR 40.0%
AAACCAATTCCCAAACCACA+CGG - chr7_2:4956942-4956961 None:intergenic 40.0%
TGGGTAACAGGATAAACAGT+AGG - chr7_2:4957469-4957488 None:intergenic 40.0%
CCCACCAATAACATTACAAG+TGG + chr7_2:4957485-4957504 Msa1045450:three_prime_UTR 40.0%
TTGACAGTACACTCTCTTGA+AGG + chr7_2:4957604-4957623 Msa1045450:three_prime_UTR 40.0%
TCTTGAAGGTTCTTCTCAGT+AGG + chr7_2:4957618-4957637 Msa1045450:three_prime_UTR 40.0%
CTTGAAGGTTCTTCTCAGTA+GGG + chr7_2:4957619-4957638 Msa1045450:three_prime_UTR 40.0%
TTGAAGGTTCTTCTCAGTAG+GGG + chr7_2:4957620-4957639 Msa1045450:three_prime_UTR 40.0%
!!! GATTTTCGGTTCGGATTTGA+CGG - chr7_2:4957675-4957694 None:intergenic 40.0%
! CGCATCATAGATTTTCGGTT+CGG - chr7_2:4957684-4957703 None:intergenic 40.0%
CGAACCGAAAATCTATGATG+CGG + chr7_2:4957682-4957701 Msa1045450:three_prime_UTR 40.0%
GAACCGAAAATCTATGATGC+GGG + chr7_2:4957683-4957702 Msa1045450:three_prime_UTR 40.0%
!!! CGGTTGTCGGGTTTTAAAAA+TGG + chr7_2:4957716-4957735 Msa1045450:three_prime_UTR 40.0%
! CGAGTATGTATGGGTTTTCA+CGG + chr7_2:4957745-4957764 Msa1045450:three_prime_UTR 40.0%
CAACGGAGAAGAGAAGAAGA+AGG - chr7_2:4952963-4952982 None:intergenic 45.0%
CTTCTTCTTCTCTTCTCCGT+TGG + chr7_2:4952961-4952980 Msa1045450:five_prime_UTR 45.0%
AAACTGGAATTGGGCACCAA+CGG - chr7_2:4952980-4952999 None:intergenic 45.0%
GTACACGTGGAAACTGGAAT+TGG - chr7_2:4952990-4953009 None:intergenic 45.0%
AAGTGTGGAGGAAGAGTGAT+CGG - chr7_2:4953021-4953040 None:intergenic 45.0%
! TTCAGGATTCATGACGGAGA+AGG - chr7_2:4953046-4953065 None:intergenic 45.0%
CTCCTTCTTATTGGAGACTC+TGG + chr7_2:4954237-4954256 Msa1045450:CDS 45.0%
CACCAGAGTCTCCAATAAGA+AGG - chr7_2:4954242-4954261 None:intergenic 45.0%
CTTATTGGAGACTCTGGTGT+TGG + chr7_2:4954243-4954262 Msa1045450:CDS 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr7_2:4954590-4954609 Msa1045450:intron 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr7_2:4954590-4954609 Msa1045450:intron 45.0%
! ATTGATGACATGGAGGTGGA+GGG + chr7_2:4954727-4954746 Msa1045450:intron 45.0%
TGGAGGTGGAGGGAATATAA+TGG + chr7_2:4954737-4954756 Msa1045450:intron 45.0%
AGGTGGAGGGAATATAATGG+AGG + chr7_2:4954740-4954759 Msa1045450:intron 45.0%
! GGTGGAGGGAATATAATGGA+GGG + chr7_2:4954741-4954760 Msa1045450:intron 45.0%
! GGGAATATAATGGAGGGAAC+TGG + chr7_2:4954747-4954766 Msa1045450:intron 45.0%
! ATAATGGAGGGAACTGGACT+AGG + chr7_2:4954753-4954772 Msa1045450:intron 45.0%
TAATGGAGGGAACTGGACTA+GGG + chr7_2:4954754-4954773 Msa1045450:intron 45.0%
ATTCGAACTGTTGAGCAGGA+TGG + chr7_2:4955322-4955341 Msa1045450:CDS 45.0%
TTCGAACTGTTGAGCAGGAT+GGG + chr7_2:4955323-4955342 Msa1045450:CDS 45.0%
TGTCCTAAATCGTTCTTGCC+CGG - chr7_2:4955483-4955502 None:intergenic 45.0%
AACCAGTAGCTACTATCGTG+GGG + chr7_2:4955505-4955524 Msa1045450:CDS 45.0%
TAAGGCTGAGCCTACTTCAA+AGG - chr7_2:4956108-4956127 None:intergenic 45.0%
CATTGTTAGACCATCCCCAA+TGG + chr7_2:4956162-4956181 Msa1045450:intron 45.0%
TTGTTAGACCATCCCCAATG+GGG + chr7_2:4956164-4956183 Msa1045450:intron 45.0%
! AAATTTGAGACCCCCCCATT+GGG - chr7_2:4956180-4956199 None:intergenic 45.0%
! AAAATTTGAGACCCCCCCAT+TGG - chr7_2:4956181-4956200 None:intergenic 45.0%
CTATTAGGTGTACCCCCATT+GGG + chr7_2:4956214-4956233 Msa1045450:intron 45.0%
TATTAGGTGTACCCCCATTG+GGG + chr7_2:4956215-4956234 Msa1045450:intron 45.0%
AAAACCTTTCTCCCCAATGG+GGG - chr7_2:4956229-4956248 None:intergenic 45.0%
CCAAAAACCTTTCTCCCCAA+TGG - chr7_2:4956232-4956251 None:intergenic 45.0%
! CCATTGGGGAGAAAGGTTTT+TGG + chr7_2:4956229-4956248 Msa1045450:intron 45.0%
CACTTAAGACCCCCAATGTT+AGG + chr7_2:4956273-4956292 Msa1045450:intron 45.0%
ATGGAGACACCTAACATTGG+GGG - chr7_2:4956285-4956304 None:intergenic 45.0%
TCCCTGACTGCATGAATGTA+TGG - chr7_2:4956508-4956527 None:intergenic 45.0%
TGACATACGGGCTTGAAATC+TGG + chr7_2:4956596-4956615 Msa1045450:intron 45.0%
TCTCTGTCTGCATGAATGTG+TGG + chr7_2:4956651-4956670 Msa1045450:intron 45.0%
TTGCATTGTTTGCGGATGGT+TGG - chr7_2:4956765-4956784 None:intergenic 45.0%
AACCATCCGCAAACAATGCA+AGG + chr7_2:4956764-4956783 Msa1045450:CDS 45.0%
TGTCCTCTAATCTGCACTGT+TGG - chr7_2:4956793-4956812 None:intergenic 45.0%
CAGATTAGAGGACAACCAGT+TGG + chr7_2:4956799-4956818 Msa1045450:CDS 45.0%
!!! CACCCACTTTTTTGACCAAC+TGG - chr7_2:4956817-4956836 None:intergenic 45.0%
CATAATCCACCGTGTGGTTT+GGG + chr7_2:4956930-4956949 Msa1045450:three_prime_UTR 45.0%
CATGGCACGAATACATGAAG+TGG - chr7_2:4957244-4957263 None:intergenic 45.0%
! GGTTCGGATTTGACGGTTTT+CGG - chr7_2:4957668-4957687 None:intergenic 45.0%
! CCACCCGCATCATAGATTTT+CGG - chr7_2:4957689-4957708 None:intergenic 45.0%
CGAAAATCTATGATGCGGGT+GGG + chr7_2:4957687-4957706 Msa1045450:three_prime_UTR 45.0%
TTCATTGTTTCGGTCGGTCA+CGG - chr7_2:4957806-4957825 None:intergenic 45.0%
CAACGGAGAAGAGAAGAAGA+AGG - chr7_2:4952963-4952982 None:intergenic 45.0%
CTTCTTCTTCTCTTCTCCGT+TGG + chr7_2:4952961-4952980 Msa1045450:five_prime_UTR 45.0%
AAACTGGAATTGGGCACCAA+CGG - chr7_2:4952980-4952999 None:intergenic 45.0%
GTACACGTGGAAACTGGAAT+TGG - chr7_2:4952990-4953009 None:intergenic 45.0%
AAGTGTGGAGGAAGAGTGAT+CGG - chr7_2:4953021-4953040 None:intergenic 45.0%
! TTCAGGATTCATGACGGAGA+AGG - chr7_2:4953046-4953065 None:intergenic 45.0%
CTCCTTCTTATTGGAGACTC+TGG + chr7_2:4954237-4954256 Msa1045450:CDS 45.0%
CACCAGAGTCTCCAATAAGA+AGG - chr7_2:4954242-4954261 None:intergenic 45.0%
CTTATTGGAGACTCTGGTGT+TGG + chr7_2:4954243-4954262 Msa1045450:CDS 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr7_2:4954590-4954609 Msa1045450:intron 45.0%
! GTAGGAGAAGTGTGTAAGGT+AGG + chr7_2:4954590-4954609 Msa1045450:intron 45.0%
! ATTGATGACATGGAGGTGGA+GGG + chr7_2:4954727-4954746 Msa1045450:intron 45.0%
TGGAGGTGGAGGGAATATAA+TGG + chr7_2:4954737-4954756 Msa1045450:intron 45.0%
AGGTGGAGGGAATATAATGG+AGG + chr7_2:4954740-4954759 Msa1045450:intron 45.0%
! GGTGGAGGGAATATAATGGA+GGG + chr7_2:4954741-4954760 Msa1045450:intron 45.0%
! GGGAATATAATGGAGGGAAC+TGG + chr7_2:4954747-4954766 Msa1045450:intron 45.0%
! ATAATGGAGGGAACTGGACT+AGG + chr7_2:4954753-4954772 Msa1045450:intron 45.0%
TAATGGAGGGAACTGGACTA+GGG + chr7_2:4954754-4954773 Msa1045450:intron 45.0%
ATTCGAACTGTTGAGCAGGA+TGG + chr7_2:4955322-4955341 Msa1045450:CDS 45.0%
TTCGAACTGTTGAGCAGGAT+GGG + chr7_2:4955323-4955342 Msa1045450:CDS 45.0%
TGTCCTAAATCGTTCTTGCC+CGG - chr7_2:4955483-4955502 None:intergenic 45.0%
AACCAGTAGCTACTATCGTG+GGG + chr7_2:4955505-4955524 Msa1045450:CDS 45.0%
TAAGGCTGAGCCTACTTCAA+AGG - chr7_2:4956108-4956127 None:intergenic 45.0%
CATTGTTAGACCATCCCCAA+TGG + chr7_2:4956162-4956181 Msa1045450:intron 45.0%
TTGTTAGACCATCCCCAATG+GGG + chr7_2:4956164-4956183 Msa1045450:intron 45.0%
! AAATTTGAGACCCCCCCATT+GGG - chr7_2:4956180-4956199 None:intergenic 45.0%
! AAAATTTGAGACCCCCCCAT+TGG - chr7_2:4956181-4956200 None:intergenic 45.0%
CTATTAGGTGTACCCCCATT+GGG + chr7_2:4956214-4956233 Msa1045450:intron 45.0%
TATTAGGTGTACCCCCATTG+GGG + chr7_2:4956215-4956234 Msa1045450:intron 45.0%
AAAACCTTTCTCCCCAATGG+GGG - chr7_2:4956229-4956248 None:intergenic 45.0%
CCAAAAACCTTTCTCCCCAA+TGG - chr7_2:4956232-4956251 None:intergenic 45.0%
! CCATTGGGGAGAAAGGTTTT+TGG + chr7_2:4956229-4956248 Msa1045450:intron 45.0%
CACTTAAGACCCCCAATGTT+AGG + chr7_2:4956273-4956292 Msa1045450:intron 45.0%
ATGGAGACACCTAACATTGG+GGG - chr7_2:4956285-4956304 None:intergenic 45.0%
TCCCTGACTGCATGAATGTA+TGG - chr7_2:4956508-4956527 None:intergenic 45.0%
TGACATACGGGCTTGAAATC+TGG + chr7_2:4956596-4956615 Msa1045450:intron 45.0%
TCTCTGTCTGCATGAATGTG+TGG + chr7_2:4956651-4956670 Msa1045450:intron 45.0%
TTGCATTGTTTGCGGATGGT+TGG - chr7_2:4956765-4956784 None:intergenic 45.0%
AACCATCCGCAAACAATGCA+AGG + chr7_2:4956764-4956783 Msa1045450:CDS 45.0%
TGTCCTCTAATCTGCACTGT+TGG - chr7_2:4956793-4956812 None:intergenic 45.0%
CAGATTAGAGGACAACCAGT+TGG + chr7_2:4956799-4956818 Msa1045450:CDS 45.0%
!!! CACCCACTTTTTTGACCAAC+TGG - chr7_2:4956817-4956836 None:intergenic 45.0%
CATAATCCACCGTGTGGTTT+GGG + chr7_2:4956930-4956949 Msa1045450:three_prime_UTR 45.0%
CATGGCACGAATACATGAAG+TGG - chr7_2:4957244-4957263 None:intergenic 45.0%
! GGTTCGGATTTGACGGTTTT+CGG - chr7_2:4957668-4957687 None:intergenic 45.0%
! CCACCCGCATCATAGATTTT+CGG - chr7_2:4957689-4957708 None:intergenic 45.0%
CGAAAATCTATGATGCGGGT+GGG + chr7_2:4957687-4957706 Msa1045450:three_prime_UTR 45.0%
TTCATTGTTTCGGTCGGTCA+CGG - chr7_2:4957806-4957825 None:intergenic 45.0%
!!! ACATTTTTTTTTTATTTTAT+AGG - chr7_2:4957397-4957416 None:intergenic 5.0%
!!! ACATTTTTTTTTTATTTTAT+AGG - chr7_2:4957397-4957416 None:intergenic 5.0%
! ATGACGGAGAAGGTGAAGTG+TGG - chr7_2:4953036-4953055 None:intergenic 50.0%
CCTGATTAGCGTCCAATGTG+CGG + chr7_2:4954524-4954543 Msa1045450:intron 50.0%
!! GGTAGGCATTGATGACATGG+AGG + chr7_2:4954720-4954739 Msa1045450:intron 50.0%
!! AGGCATTGATGACATGGAGG+TGG + chr7_2:4954723-4954742 Msa1045450:intron 50.0%
! CATTGATGACATGGAGGTGG+AGG + chr7_2:4954726-4954745 Msa1045450:intron 50.0%
! AATGGAGGGAACTGGACTAG+GGG + chr7_2:4954755-4954774 Msa1045450:intron 50.0%
! TTCTTGTAGTGGGACACTGC+CGG + chr7_2:4955461-4955480 Msa1045450:intron 50.0%
CTGAGCCTACTTCAAAGGCA+TGG - chr7_2:4956103-4956122 None:intergenic 50.0%
TGTTAGACCATCCCCAATGG+GGG + chr7_2:4956165-4956184 Msa1045450:intron 50.0%
! AATTTGAGACCCCCCCATTG+GGG - chr7_2:4956179-4956198 None:intergenic 50.0%
GGGTACACCTAATAGGTACC+AGG - chr7_2:4956209-4956228 None:intergenic 50.0%
! CCAATGGGGGTACACCTAAT+AGG - chr7_2:4956216-4956235 None:intergenic 50.0%
CCTATTAGGTGTACCCCCAT+TGG + chr7_2:4956213-4956232 Msa1045450:intron 50.0%
GGGGGTCTTAAGTGAGACTT+GGG - chr7_2:4956267-4956286 None:intergenic 50.0%
TGGGGGTCTTAAGTGAGACT+TGG - chr7_2:4956268-4956287 None:intergenic 50.0%
CATGCAGTCAGGGACATTGA+CGG + chr7_2:4956514-4956533 Msa1045450:intron 50.0%
ACCGTCTAATCTCGGTCCAA+CGG + chr7_2:4956619-4956638 Msa1045450:intron 50.0%
TGGAGGCCTTGCATTGTTTG+CGG - chr7_2:4956773-4956792 None:intergenic 50.0%
CCTCTAATCTGCACTGTTGG+AGG - chr7_2:4956790-4956809 None:intergenic 50.0%
CCTCCAACAGTGCAGATTAG+AGG + chr7_2:4956787-4956806 Msa1045450:CDS 50.0%
GCATAATCCACCGTGTGGTT+TGG + chr7_2:4956929-4956948 Msa1045450:three_prime_UTR 50.0%
! GGATTTGACGGTTTTCGGAC+GGG - chr7_2:4957663-4957682 None:intergenic 50.0%
! CGGATTTGACGGTTTTCGGA+CGG - chr7_2:4957664-4957683 None:intergenic 50.0%
CCGAAAATCTATGATGCGGG+TGG + chr7_2:4957686-4957705 Msa1045450:three_prime_UTR 50.0%
! ATGATGCGGGTGGGTTCAAT+CGG + chr7_2:4957696-4957715 Msa1045450:three_prime_UTR 50.0%
! TGGGTTTTCACGGTCGAGTT+CGG + chr7_2:4957755-4957774 Msa1045450:three_prime_UTR 50.0%
TCATTGTTTCGGTCGGTCAC+GGG - chr7_2:4957805-4957824 None:intergenic 50.0%
! ATGACGGAGAAGGTGAAGTG+TGG - chr7_2:4953036-4953055 None:intergenic 50.0%
CCTGATTAGCGTCCAATGTG+CGG + chr7_2:4954524-4954543 Msa1045450:intron 50.0%
!! GGTAGGCATTGATGACATGG+AGG + chr7_2:4954720-4954739 Msa1045450:intron 50.0%
!! AGGCATTGATGACATGGAGG+TGG + chr7_2:4954723-4954742 Msa1045450:intron 50.0%
! CATTGATGACATGGAGGTGG+AGG + chr7_2:4954726-4954745 Msa1045450:intron 50.0%
! AATGGAGGGAACTGGACTAG+GGG + chr7_2:4954755-4954774 Msa1045450:intron 50.0%
! TTCTTGTAGTGGGACACTGC+CGG + chr7_2:4955461-4955480 Msa1045450:intron 50.0%
CTGAGCCTACTTCAAAGGCA+TGG - chr7_2:4956103-4956122 None:intergenic 50.0%
TGTTAGACCATCCCCAATGG+GGG + chr7_2:4956165-4956184 Msa1045450:intron 50.0%
! AATTTGAGACCCCCCCATTG+GGG - chr7_2:4956179-4956198 None:intergenic 50.0%
GGGTACACCTAATAGGTACC+AGG - chr7_2:4956209-4956228 None:intergenic 50.0%
! CCAATGGGGGTACACCTAAT+AGG - chr7_2:4956216-4956235 None:intergenic 50.0%
CCTATTAGGTGTACCCCCAT+TGG + chr7_2:4956213-4956232 Msa1045450:intron 50.0%
GGGGGTCTTAAGTGAGACTT+GGG - chr7_2:4956267-4956286 None:intergenic 50.0%
TGGGGGTCTTAAGTGAGACT+TGG - chr7_2:4956268-4956287 None:intergenic 50.0%
CATGCAGTCAGGGACATTGA+CGG + chr7_2:4956514-4956533 Msa1045450:intron 50.0%
ACCGTCTAATCTCGGTCCAA+CGG + chr7_2:4956619-4956638 Msa1045450:intron 50.0%
TGGAGGCCTTGCATTGTTTG+CGG - chr7_2:4956773-4956792 None:intergenic 50.0%
CCTCTAATCTGCACTGTTGG+AGG - chr7_2:4956790-4956809 None:intergenic 50.0%
CCTCCAACAGTGCAGATTAG+AGG + chr7_2:4956787-4956806 Msa1045450:CDS 50.0%
GCATAATCCACCGTGTGGTT+TGG + chr7_2:4956929-4956948 Msa1045450:three_prime_UTR 50.0%
! GGATTTGACGGTTTTCGGAC+GGG - chr7_2:4957663-4957682 None:intergenic 50.0%
! CGGATTTGACGGTTTTCGGA+CGG - chr7_2:4957664-4957683 None:intergenic 50.0%
CCGAAAATCTATGATGCGGG+TGG + chr7_2:4957686-4957705 Msa1045450:three_prime_UTR 50.0%
! ATGATGCGGGTGGGTTCAAT+CGG + chr7_2:4957696-4957715 Msa1045450:three_prime_UTR 50.0%
! TGGGTTTTCACGGTCGAGTT+CGG + chr7_2:4957755-4957774 Msa1045450:three_prime_UTR 50.0%
TCATTGTTTCGGTCGGTCAC+GGG - chr7_2:4957805-4957824 None:intergenic 50.0%
CCAGTTTCCACGTGTACCAC+CGG + chr7_2:4952993-4953012 Msa1045450:five_prime_UTR 55.0%
GGAGGAAGAGTGATCGGATC+CGG - chr7_2:4953015-4953034 None:intergenic 55.0%
ACGGAGAAGGTGAAGTGTGG+AGG - chr7_2:4953033-4953052 None:intergenic 55.0%
CCGCACATTGGACGCTAATC+AGG - chr7_2:4954527-4954546 None:intergenic 55.0%
! TCTTGTAGTGGGACACTGCC+GGG + chr7_2:4955462-4955481 Msa1045450:intron 55.0%
CTGCCGGGCAAGAACGATTT+AGG + chr7_2:4955477-4955496 Msa1045450:CDS 55.0%
TGCCCCACGATAGTAGCTAC+TGG - chr7_2:4955510-4955529 None:intergenic 55.0%
AGCTACTATCGTGGGGCACA+TGG + chr7_2:4955512-4955531 Msa1045450:CDS 55.0%
!! GGAAGGAGCATTCATGGCCA+TGG + chr7_2:4955986-4956005 Msa1045450:CDS 55.0%
! ATCCTTGATGGCAGCAGCCA+TGG - chr7_2:4956006-4956025 None:intergenic 55.0%
TGGCTGCTGCCATCAAGGAT+AGG + chr7_2:4956006-4956025 Msa1045450:CDS 55.0%
GTTAGACCATCCCCAATGGG+GGG + chr7_2:4956166-4956185 Msa1045450:intron 55.0%
TTAGACCATCCCCAATGGGG+GGG + chr7_2:4956167-4956186 Msa1045450:intron 55.0%
TGTACCCCCATTGGGGAGAA+AGG + chr7_2:4956222-4956241 Msa1045450:intron 55.0%
GCCGTTGGACCGAGATTAGA+CGG - chr7_2:4956623-4956642 None:intergenic 55.0%
CATGCAGACAGAGATGTCGG+TGG - chr7_2:4956645-4956664 None:intergenic 55.0%
GGCCTTGCATTGTTTGCGGA+TGG - chr7_2:4956769-4956788 None:intergenic 55.0%
CCAATTCCCAAACCACACGG+TGG - chr7_2:4956939-4956958 None:intergenic 55.0%
! CCACCGTGTGGTTTGGGAAT+TGG + chr7_2:4956936-4956955 Msa1045450:three_prime_UTR 55.0%
! GGGTGGGTTCAATCGGTTGT+CGG + chr7_2:4957703-4957722 Msa1045450:three_prime_UTR 55.0%
! GGTGGGTTCAATCGGTTGTC+GGG + chr7_2:4957704-4957723 Msa1045450:three_prime_UTR 55.0%
TTTCGGTCGGTCACGGGTTT+GGG - chr7_2:4957799-4957818 None:intergenic 55.0%
CCAGTTTCCACGTGTACCAC+CGG + chr7_2:4952993-4953012 Msa1045450:five_prime_UTR 55.0%
GGAGGAAGAGTGATCGGATC+CGG - chr7_2:4953015-4953034 None:intergenic 55.0%
ACGGAGAAGGTGAAGTGTGG+AGG - chr7_2:4953033-4953052 None:intergenic 55.0%
CCGCACATTGGACGCTAATC+AGG - chr7_2:4954527-4954546 None:intergenic 55.0%
! TCTTGTAGTGGGACACTGCC+GGG + chr7_2:4955462-4955481 Msa1045450:intron 55.0%
CTGCCGGGCAAGAACGATTT+AGG + chr7_2:4955477-4955496 Msa1045450:CDS 55.0%
TGCCCCACGATAGTAGCTAC+TGG - chr7_2:4955510-4955529 None:intergenic 55.0%
AGCTACTATCGTGGGGCACA+TGG + chr7_2:4955512-4955531 Msa1045450:CDS 55.0%
!! GGAAGGAGCATTCATGGCCA+TGG + chr7_2:4955986-4956005 Msa1045450:CDS 55.0%
! ATCCTTGATGGCAGCAGCCA+TGG - chr7_2:4956006-4956025 None:intergenic 55.0%
TGGCTGCTGCCATCAAGGAT+AGG + chr7_2:4956006-4956025 Msa1045450:CDS 55.0%
GTTAGACCATCCCCAATGGG+GGG + chr7_2:4956166-4956185 Msa1045450:intron 55.0%
TTAGACCATCCCCAATGGGG+GGG + chr7_2:4956167-4956186 Msa1045450:intron 55.0%
TGTACCCCCATTGGGGAGAA+AGG + chr7_2:4956222-4956241 Msa1045450:intron 55.0%
GCCGTTGGACCGAGATTAGA+CGG - chr7_2:4956623-4956642 None:intergenic 55.0%
CATGCAGACAGAGATGTCGG+TGG - chr7_2:4956645-4956664 None:intergenic 55.0%
GGCCTTGCATTGTTTGCGGA+TGG - chr7_2:4956769-4956788 None:intergenic 55.0%
CCAATTCCCAAACCACACGG+TGG - chr7_2:4956939-4956958 None:intergenic 55.0%
! CCACCGTGTGGTTTGGGAAT+TGG + chr7_2:4956936-4956955 Msa1045450:three_prime_UTR 55.0%
! GGGTGGGTTCAATCGGTTGT+CGG + chr7_2:4957703-4957722 Msa1045450:three_prime_UTR 55.0%
! GGTGGGTTCAATCGGTTGTC+GGG + chr7_2:4957704-4957723 Msa1045450:three_prime_UTR 55.0%
TTTCGGTCGGTCACGGGTTT+GGG - chr7_2:4957799-4957818 None:intergenic 55.0%
CCGGTGGTACACGTGGAAAC+TGG - chr7_2:4952996-4953015 None:intergenic 60.0%
ATCGGATCCGGTGGTACACG+TGG - chr7_2:4953003-4953022 None:intergenic 60.0%
GGAAGAGTGATCGGATCCGG+TGG - chr7_2:4953012-4953031 None:intergenic 60.0%
! GAGGGAACTGGACTAGGGGA+GGG + chr7_2:4954759-4954778 Msa1045450:intron 60.0%
! AGGGAACTGGACTAGGGGAG+GGG + chr7_2:4954760-4954779 Msa1045450:intron 60.0%
TCAGGGACATTGACGGCCGT+TGG + chr7_2:4956521-4956540 Msa1045450:intron 60.0%
ACAGAGATGTCGGTGGCCGT+TGG - chr7_2:4956638-4956657 None:intergenic 60.0%
! GACGGTTTTCGGACGGGTCT+CGG - chr7_2:4957657-4957676 None:intergenic 60.0%
GTTTCGGTCGGTCACGGGTT+TGG - chr7_2:4957800-4957819 None:intergenic 60.0%
CCGGTGGTACACGTGGAAAC+TGG - chr7_2:4952996-4953015 None:intergenic 60.0%
ATCGGATCCGGTGGTACACG+TGG - chr7_2:4953003-4953022 None:intergenic 60.0%
GGAAGAGTGATCGGATCCGG+TGG - chr7_2:4953012-4953031 None:intergenic 60.0%
! GAGGGAACTGGACTAGGGGA+GGG + chr7_2:4954759-4954778 Msa1045450:intron 60.0%
! AGGGAACTGGACTAGGGGAG+GGG + chr7_2:4954760-4954779 Msa1045450:intron 60.0%
TCAGGGACATTGACGGCCGT+TGG + chr7_2:4956521-4956540 Msa1045450:intron 60.0%
ACAGAGATGTCGGTGGCCGT+TGG - chr7_2:4956638-4956657 None:intergenic 60.0%
! GACGGTTTTCGGACGGGTCT+CGG - chr7_2:4957657-4957676 None:intergenic 60.0%
GTTTCGGTCGGTCACGGGTT+TGG - chr7_2:4957800-4957819 None:intergenic 60.0%
! GGAGGGAACTGGACTAGGGG+AGG + chr7_2:4954758-4954777 Msa1045450:intron 65.0%
! GGGAACTGGACTAGGGGAGG+GGG + chr7_2:4954761-4954780 Msa1045450:intron 65.0%
GGCCATGGCTGCTGCCATCA+AGG + chr7_2:4956001-4956020 Msa1045450:CDS 65.0%
TGAGACCCCCCCATTGGGGA+TGG - chr7_2:4956175-4956194 None:intergenic 65.0%
! GGAGGGAACTGGACTAGGGG+AGG + chr7_2:4954758-4954777 Msa1045450:intron 65.0%
! GGGAACTGGACTAGGGGAGG+GGG + chr7_2:4954761-4954780 Msa1045450:intron 65.0%
GGCCATGGCTGCTGCCATCA+AGG + chr7_2:4956001-4956020 Msa1045450:CDS 65.0%
TGAGACCCCCCCATTGGGGA+TGG - chr7_2:4956175-4956194 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 4952828 4957900 4952828 ID=Msa1045450;Name=Msa1045450
chr7_2 mRNA 4952828 4957900 4952828 ID=Msa1045450-mRNA-1;Parent=Msa1045450;Name=Msa1045450-mRNA-1;_AED=0.11;_eAED=0.11;_QI=226|1|1|1|0.85|0.87|8|1051|203
chr7_2 exon 4952828 4953067 4952828 ID=Msa1045450-mRNA-1:exon:1130;Parent=Msa1045450-mRNA-1
chr7_2 exon 4954221 4954293 4954221 ID=Msa1045450-mRNA-1:exon:1131;Parent=Msa1045450-mRNA-1
chr7_2 exon 4955180 4955227 4955180 ID=Msa1045450-mRNA-1:exon:1132;Parent=Msa1045450-mRNA-1
chr7_2 exon 4955319 4955366 4955319 ID=Msa1045450-mRNA-1:exon:1133;Parent=Msa1045450-mRNA-1
chr7_2 exon 4955470 4955541 4955470 ID=Msa1045450-mRNA-1:exon:1134;Parent=Msa1045450-mRNA-1
chr7_2 exon 4955631 4955786 4955631 ID=Msa1045450-mRNA-1:exon:1135;Parent=Msa1045450-mRNA-1
chr7_2 exon 4955924 4956027 4955924 ID=Msa1045450-mRNA-1:exon:1136;Parent=Msa1045450-mRNA-1
chr7_2 exon 4956753 4957900 4956753 ID=Msa1045450-mRNA-1:exon:1137;Parent=Msa1045450-mRNA-1
chr7_2 five_prime_UTR 4952828 4953053 4952828 ID=Msa1045450-mRNA-1:five_prime_utr;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4953054 4953067 4953054 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4954221 4954293 4954221 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4955180 4955227 4955180 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4955319 4955366 4955319 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4955470 4955541 4955470 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4955631 4955786 4955631 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4955924 4956027 4955924 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 CDS 4956753 4956849 4956753 ID=Msa1045450-mRNA-1:cds;Parent=Msa1045450-mRNA-1
chr7_2 three_prime_UTR 4956850 4957900 4956850 ID=Msa1045450-mRNA-1:three_prime_utr;Parent=Msa1045450-mRNA-1
Gene Sequence

>Msa1045450

ATGAATCCTGAATATGATTATCTGTTCAAGCTCCTTCTTATTGGAGACTCTGGTGTTGGTAAATCATGCCTTCTTCTAAGATTTGCTGATGATTCATACATTGATAGCTACATAAGCACCATTGGAGTTGATTTTAAAATTCGAACTGTTGAGCAGGATGGGAAGACAATTAAGCTACAGATTTGGGACACTGCCGGGCAAGAACGATTTAGGACAATAACCAGTAGCTACTATCGTGGGGCACATGGAATCATTATTGTTTATGATGTGACCGATGAAGAGAGCTTCAATAATGTGAAGCAGTGGCTCAGTGAAATTGACCGCTATGCCAGTGATAATGTTAACAAGCTTTTGGTTGGAAACAAGAGTGATCTGACAGCAAATAGAGCTGTCTCATATGATACAGCTAAAGAATTTGCAGATCAAATCGGCATACCTTTTATGGAAACAAGTGCAAAGGATGCTACAAATGTGGAAGGAGCATTCATGGCCATGGCTGCTGCCATCAAGGATAGAATGGCGAGCCAACCATCCGCAAACAATGCAAGGCCTCCAACAGTGCAGATTAGAGGACAACCAGTTGGTCAAAAAAGTGGGTGCTGCTCTTCCTAA

Protein sequence

>Msa1045450

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQPVGQKSGCCSS*