AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1184900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184900 MtrunA17_Chr8g0350391 91.518 672 23 2 1 672 1 638 0.0 1266
Msa1184900 MtrunA17_Chr7g0246701 72.205 662 143 4 14 672 10 633 0.0 999
Msa1184900 MtrunA17_Chr6g0472571 59.756 656 220 6 18 672 22 634 0.0 823
Msa1184900 MtrunA17_Chr1g0203741 59.380 645 212 8 23 665 22 618 0.0 798
Msa1184900 MtrunA17_Chr8g0388881 53.729 657 246 7 24 672 22 628 0.0 730
Msa1184900 MtrunA17_Chr4g0055031 51.170 641 259 7 27 666 18 605 0.0 690
Msa1184900 MtrunA17_Chr8g0361791 50.858 641 257 9 27 665 17 601 0.0 673
Msa1184900 MtrunA17_Chr5g0416991 48.995 647 261 9 27 666 17 601 0.0 646
Msa1184900 MtrunA17_Chr3g0092501 47.759 647 265 8 26 666 20 599 0.0 626
Msa1184900 MtrunA17_Chr7g0214551 47.780 563 257 5 101 658 35 565 0.0 580
Msa1184900 MtrunA17_Chr8g0369481 46.774 558 256 10 109 664 70 588 9.89e-177 516
Msa1184900 MtrunA17_Chr5g0409411 42.240 625 298 13 48 664 21 590 4.98e-167 491
Msa1184900 MtrunA17_Chr8g0350351 41.964 560 270 8 112 665 91 601 9.11e-160 473
Msa1184900 MtrunA17_Chr7g0246681 42.934 559 264 8 112 664 78 587 9.26e-158 467
Msa1184900 MtrunA17_Chr1g0183721 39.826 575 276 11 109 664 62 585 1.69e-146 439
Msa1184900 MtrunA17_Chr5g0435751 40.885 565 258 12 105 661 121 617 3.96e-144 433
Msa1184900 MtrunA17_Chr3g0112341 41.385 563 274 13 112 666 156 670 7.68e-144 434
Msa1184900 MtrunA17_Chr1g0167381 40.511 548 259 10 109 640 92 588 8.83e-141 425
Msa1184900 MtrunA17_Chr1g0187601 40.441 544 267 10 109 641 91 588 4.56e-136 412
Msa1184900 MtrunA17_Chr1g0159741 39.373 574 276 14 102 663 145 658 1.14e-134 410
Msa1184900 MtrunA17_Chr3g0113981 38.530 558 276 15 118 668 175 672 1.93e-125 387
Msa1184900 MtrunA17_Chr3g0130381 38.840 569 278 17 118 670 268 782 1.06e-122 383
Msa1184900 MtrunA17_Chr5g0437501 35.789 570 288 16 113 664 96 605 5.17e-121 373
Msa1184900 MtrunA17_Chr3g0125511 37.833 563 281 18 118 664 233 742 1.18e-118 372
Msa1184900 MtrunA17_Chr1g0171781 34.604 682 344 19 5 665 4 604 2.95e-118 366
Msa1184900 MtrunA17_Chr8g0384431 38.026 547 271 17 118 647 298 793 1.62e-116 367
Msa1184900 MtrunA17_Chr8g0372471 35.879 563 286 16 118 664 387 890 8.51e-109 349
Msa1184900 MtrunA17_Chr1g0155141 34.103 563 289 17 115 664 206 699 2.78e-91 298
Msa1184900 MtrunA17_Chr3g0115931 31.291 604 308 17 104 664 149 688 2.43e-88 290
Msa1184900 MtrunA17_Chr5g0426281 30.537 596 315 17 103 664 140 670 7.88e-87 286
Msa1184900 MtrunA17_Chr5g0404771 45.267 243 106 7 118 343 329 561 1.69e-64 223
Msa1184900 MtrunA17_Chr4g0043121 32.919 322 198 7 108 420 85 397 6.12e-53 188
Msa1184900 MtrunA17_Chr5g0404761 30.844 308 164 9 358 655 1 269 9.36e-44 158
Msa1184900 MtrunA17_Chr4g0043131 36.364 176 76 5 491 663 40 182 8.82e-29 113
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1184900 AT4G00750.1 65.649 655 177 7 22 672 20 630 0.0 891
Msa1184900 AT2G45750.1 63.914 654 189 5 22 672 14 623 0.0 874
Msa1184900 AT4G10440.1 55.093 648 248 6 24 671 19 623 0.0 735
Msa1184900 AT1G33170.1 58.059 577 211 2 93 669 94 639 0.0 733
Msa1184900 AT1G26850.2 51.005 647 262 8 27 669 18 613 0.0 682
Msa1184900 AT1G26850.1 51.005 647 262 8 27 669 18 613 0.0 682
Msa1184900 AT4G18030.1 51.250 640 247 9 33 666 25 605 0.0 662
Msa1184900 AT2G43200.2 47.740 553 252 6 108 659 90 606 0.0 556
Msa1184900 AT2G43200.1 47.740 553 252 6 108 659 90 606 0.0 556
Msa1184900 AT1G26850.3 51.479 507 221 7 27 529 18 503 0.0 544
Msa1184900 AT1G31850.1 45.408 588 277 10 80 664 50 596 0.0 531
Msa1184900 AT1G31850.2 45.408 588 277 10 80 664 50 596 0.0 531
Msa1184900 AT1G31850.4 45.408 588 277 10 80 664 50 596 0.0 531
Msa1184900 AT1G31850.3 45.408 588 277 10 80 664 50 596 0.0 531
Msa1184900 AT4G19120.1 45.504 556 262 9 112 664 73 590 1.94e-174 511
Msa1184900 AT4G19120.2 45.504 556 262 9 112 664 73 590 1.94e-174 511
Msa1184900 AT4G00740.1 42.732 571 265 10 108 667 77 596 1.08e-160 476
Msa1184900 AT4G00740.2 42.732 571 265 10 108 667 77 596 1.08e-160 476
Msa1184900 AT4G19120.3 49.078 434 211 7 112 542 73 499 2.33e-148 440
Msa1184900 AT2G39750.1 41.012 573 278 13 104 666 172 694 5.24e-146 441
Msa1184900 AT1G04430.1 37.179 624 318 12 28 640 20 580 2.22e-141 427
Msa1184900 AT1G04430.3 37.179 624 318 12 28 640 20 580 2.22e-141 427
Msa1184900 AT1G04430.2 37.179 624 318 12 28 640 20 580 2.22e-141 427
Msa1184900 AT5G06050.1 39.273 578 289 14 98 663 136 663 5.49e-140 425
Msa1184900 AT1G77260.1 38.693 597 290 15 76 662 124 654 2.28e-138 420
Msa1184900 AT4G14360.1 40.146 548 261 10 109 640 76 572 4.44e-137 415
Msa1184900 AT4G14360.2 40.146 548 261 10 109 640 76 572 4.44e-137 415
Msa1184900 AT3G23300.2 38.664 569 290 12 109 664 79 601 9.44e-136 412
Msa1184900 AT3G23300.1 38.664 569 290 12 109 664 79 601 9.44e-136 412
Msa1184900 AT5G14430.1 39.373 574 287 11 109 667 80 607 2.73e-135 410
Msa1184900 AT5G14430.2 39.024 574 289 11 109 667 80 607 1.96e-133 406
Msa1184900 AT3G56080.1 37.950 556 275 16 118 664 114 608 3.49e-120 372
Msa1184900 AT2G40280.1 37.189 562 268 18 118 664 90 581 1.06e-117 364
Msa1184900 AT3G51070.1 38.394 573 276 20 118 671 381 895 1.60e-116 370
Msa1184900 AT5G04060.1 35.149 569 298 12 112 665 86 598 2.60e-116 361
Msa1184900 AT3G10200.1 36.174 575 296 13 107 665 70 589 6.37e-116 360
Msa1184900 AT1G29470.1 35.979 567 294 17 118 670 250 761 8.67e-116 365
Msa1184900 AT1G29470.2 35.979 567 294 17 118 670 250 761 8.67e-116 365
Msa1184900 AT2G34300.2 36.427 571 288 16 118 670 250 763 1.17e-115 365
Msa1184900 AT2G34300.3 36.427 571 288 16 118 670 250 763 1.17e-115 365
Msa1184900 AT2G34300.1 36.427 571 288 16 118 670 250 763 1.17e-115 365
Msa1184900 AT5G64030.1 36.945 563 285 17 118 664 308 816 5.12e-115 364
Msa1184900 AT3G56080.2 38.776 490 238 14 118 598 114 550 7.20e-107 335
Msa1184900 AT3G10200.2 37.405 524 258 12 107 615 70 538 2.94e-106 335
Msa1184900 AT3G51070.2 38.956 498 236 17 118 598 381 827 2.13e-100 326
Msa1184900 AT1G19430.1 33.982 565 288 18 115 664 228 722 1.81e-89 294
Msa1184900 AT1G19430.3 33.982 565 288 18 115 664 228 722 1.81e-89 294
Msa1184900 AT1G13860.4 30.664 587 312 15 105 661 77 598 2.36e-85 280
Msa1184900 AT1G13860.3 30.664 587 312 15 105 661 77 598 2.36e-85 280
Msa1184900 AT1G13860.1 30.664 587 312 15 105 661 77 598 2.36e-85 280
Msa1184900 AT1G13860.5 30.664 587 312 15 105 661 77 598 2.36e-85 280
Msa1184900 AT1G78240.1 30.339 590 327 15 105 663 142 678 7.58e-81 270
Msa1184900 AT1G78240.2 30.339 590 327 15 105 663 142 678 7.58e-81 270
Msa1184900 AT2G03480.2 29.302 587 313 13 104 663 81 592 8.92e-81 268
Msa1184900 AT2G03480.1 29.863 586 322 15 104 663 81 603 1.69e-78 262
Msa1184900 AT1G13860.2 31.377 494 258 13 195 661 3 442 1.14e-73 244
Msa1184900 AT1G19430.2 33.251 403 220 14 115 503 228 595 1.53e-54 197
Msa1184900 AT2G03480.3 32.056 287 181 3 104 381 81 362 5.51e-47 172

Find 201 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTGTTCTTGTAGTTTA+AGG 0.067114 8_1:+21097056 None:intergenic
CGGTAGATAAGTTTCTTTCT+AGG 0.214695 8_1:+21096621 None:intergenic
AGATTTGTTAATAATATATT+TGG 0.216530 8_1:+21096966 None:intergenic
CAGTGTTTCTGCCAGCTTAT+TGG 0.222043 8_1:+21093039 None:intergenic
AATGCATACGTTGATGATAT+TGG 0.260687 8_1:-21096375 Msa1184900:CDS
TGGTACTGTTGTTGTTGTTA+TGG 0.261643 8_1:+21096799 None:intergenic
CGCAAAATTACACCACCTTT+TGG 0.268044 8_1:+21090766 None:intergenic
TGTCTTATGTCTCAATGATT+TGG 0.268755 8_1:-21090361 Msa1184900:three_prime_UTR
GGAATTGAAGTTAGTCTCTT+TGG 0.271926 8_1:+21092024 None:intergenic
CTCAAGGTGCCTCATTCCTT+GGG 0.284464 8_1:-21093844 Msa1184900:CDS
TTGGAATTCTTGCTTCAATA+AGG 0.289872 8_1:-21093905 Msa1184900:CDS
CACTAGTTGATGATCCTGTT+TGG 0.304957 8_1:-21091825 Msa1184900:CDS
GTCTTATGTCTCAATGATTT+GGG 0.319739 8_1:-21090360 Msa1184900:three_prime_UTR
GCCGTCTTTGGTGGTGGGTC+AGG 0.321160 8_1:+21096726 None:intergenic
TTTGATAAGGTCCTTCTTCA+TGG 0.322080 8_1:+21090671 None:intergenic
TCATTGGAACCTATCAAAAT+TGG 0.328039 8_1:-21091738 Msa1184900:CDS
AACTTTCACTACTAATCCTT+GGG 0.332443 8_1:+21092001 None:intergenic
CGAGGTGTTCCGGCTTTGAT+TGG 0.333372 8_1:-21093924 Msa1184900:CDS
TAGGAACCGGTTCAGGTTCC+CGG 0.333723 8_1:-21096427 Msa1184900:CDS
GTTTATGACAAAACTTTCAT+AGG 0.336200 8_1:-21090562 Msa1184900:three_prime_UTR
TACCAGCTCCGTTTGGTTAC+CGG 0.343310 8_1:-21096554 Msa1184900:CDS
TCCTTCAAGAGCCTTTGATA+TGG 0.343800 8_1:-21093874 Msa1184900:CDS
TACTGCGTCCTGGTGGATAC+TGG 0.346582 8_1:-21093077 Msa1184900:CDS
CGGTTCAGGTTCCCGGGTGG+TGG 0.346840 8_1:-21096420 Msa1184900:CDS
ACAATATCAGGTGGCAAGTT+GGG 0.350253 8_1:-21094033 Msa1184900:intron
TATTGAATCGGACCCAGTTC+TGG 0.351720 8_1:+21096448 None:intergenic
GCTCAAGGTGCCTCATTCCT+TGG 0.353928 8_1:-21093845 Msa1184900:CDS
TGCTCTTGAACGAGGTGTTC+CGG 0.359582 8_1:-21093934 Msa1184900:CDS
TGAGAAACACGCGCCGTCTT+TGG 0.373820 8_1:+21096714 None:intergenic
TGCTATTACCAAGCCATGTC+TGG 0.373950 8_1:+21092820 None:intergenic
TAGTTGCAGTCAAGCAATAC+TGG 0.379183 8_1:-21090636 Msa1184900:CDS
CACCACCCGGGAACCTGAAC+CGG 0.386058 8_1:+21096421 None:intergenic
TTGGTTACCGGTTACCATTA+CGG 0.387657 8_1:-21096542 Msa1184900:CDS
CTCATTCCTTGGGGACAGTA+TGG 0.391794 8_1:-21093834 Msa1184900:intron
TAGTATGGAGAACATTCTTC+TGG 0.392731 8_1:-21090809 Msa1184900:CDS
GATTCAATAGGAACCGGTTC+AGG 0.394312 8_1:-21096434 Msa1184900:CDS
GGAAGGTTGAGAGGTGGTGA+TGG 0.394957 8_1:+21096842 None:intergenic
ATGCATACGTTGATGATATT+GGG 0.395046 8_1:-21096374 Msa1184900:CDS
ATGAGTTGAGTTTGAAGATT+AGG 0.399720 8_1:+21097107 None:intergenic
TCAAAGGCTCTTGAAGGATA+AGG 0.410062 8_1:+21093879 None:intergenic
ACTAGTTGATGATCCTGTTT+GGG 0.410504 8_1:-21091824 Msa1184900:CDS
TGGATTTGAAAGTGTGAAGT+AGG 0.411678 8_1:+21096994 None:intergenic
TTGGTGGTGGGTCAGGGAGG+TGG 0.412113 8_1:+21096733 None:intergenic
GGAAAGGATGGGAAAGGACT+AGG 0.412185 8_1:-21093017 Msa1184900:CDS
GTTCAAGAGCAAATTGAACT+TGG 0.413392 8_1:+21093946 None:intergenic
ACACGCGCCGTCTTTGGTGG+TGG 0.416161 8_1:+21096720 None:intergenic
ATGCCTTGCTTCTATTTGCT+AGG 0.417856 8_1:-21091714 Msa1184900:CDS
CTTGATATGAATTCTTACTT+AGG 0.419305 8_1:-21091862 Msa1184900:CDS
GGTGGATACTGGATTCTGTC+AGG 0.422593 8_1:-21093066 Msa1184900:CDS
TGATAATCTTCAAGATGTTA+AGG 0.422693 8_1:+21090472 None:intergenic
AACTTTGCAGTGCATATGAT+TGG 0.423502 8_1:+21092891 None:intergenic
AAACTTTCACTACTAATCCT+TGG 0.424114 8_1:+21092000 None:intergenic
ATCAGAACCGCTATTGATAC+TGG 0.431052 8_1:-21096324 Msa1184900:CDS
CCGTCTTTGGTGGTGGGTCA+GGG 0.437153 8_1:+21096727 None:intergenic
CAAAGGCTCTTGAAGGATAA+GGG 0.438905 8_1:+21093880 None:intergenic
ATATATGAACGTGGACTCAT+TGG 0.439385 8_1:-21091754 Msa1184900:CDS
TGGGTCAGGGAGGTGGTGAG+TGG 0.440452 8_1:+21096740 None:intergenic
TCTTTGACGTTGATTACATC+TGG 0.440750 8_1:+21092075 None:intergenic
GTATTAATTTCAGCCTCAAC+AGG 0.445082 8_1:+21091787 None:intergenic
ACAATGTTCATGACCCAAAC+AGG 0.446029 8_1:+21091811 None:intergenic
ACCGCTATTGATACTGGTTG+TGG 0.449655 8_1:-21096318 Msa1184900:CDS
TACAATATCAGGTGGCAAGT+TGG 0.454628 8_1:-21094034 Msa1184900:intron
AGAACTGGGTCCGATTCAAT+AGG 0.458182 8_1:-21096446 Msa1184900:CDS
ATCATTACCTGTGTTGGTAG+AGG 0.465030 8_1:+21091075 None:intergenic
TGGGCTTCATGAGTATCTCT+TGG 0.465190 8_1:+21093966 None:intergenic
GGCAGAAACACTGGAAAGGA+TGG 0.467575 8_1:-21093029 Msa1184900:CDS
TGCCTTGCTTCTATTTGCTA+GGG 0.468748 8_1:-21091713 Msa1184900:CDS
CCGGAGAGTTTCCTCTGGTA+AGG 0.472180 8_1:+21096584 None:intergenic
TGTTTCTGCCAGCTTATTGG+TGG 0.474511 8_1:+21093042 None:intergenic
TCAAAGAAAATACTGAGTTA+TGG 0.474678 8_1:-21091954 Msa1184900:CDS
GCCATATCAAAGGCTCTTGA+AGG 0.476108 8_1:+21093873 None:intergenic
GATATGAATTCTTACTTAGG+AGG 0.477149 8_1:-21091859 Msa1184900:CDS
CGGCTCTCCGGCCACCGTAA+TGG 0.479127 8_1:+21096528 None:intergenic
GATTCTCAGCTAGCTGAGAC+TGG 0.479166 8_1:-21091901 Msa1184900:CDS
GTGGAAGCATATGGAGGAGG+AGG 0.480405 8_1:+21096821 None:intergenic
CATTGAGACATAAGACAACT+TGG 0.482261 8_1:+21090367 None:intergenic
ATCTGGCAGTGGGGTCAAGC+AGG 0.483835 8_1:+21092092 None:intergenic
GGTAGATAAGTTTCTTTCTA+GGG 0.486795 8_1:+21096622 None:intergenic
ATCCTGTGCTTCTTCACAGA+AGG 0.489745 8_1:+21092843 None:intergenic
ACGTTGATTACATCTGGCAG+TGG 0.492741 8_1:+21092081 None:intergenic
GTTGTTATGGTGGAAGCATA+TGG 0.493994 8_1:+21096812 None:intergenic
AATGTGTCACAGATGTAGTA+TGG 0.494069 8_1:-21090824 Msa1184900:intron
GTCATAAGTTCGTGGGTAAG+TGG 0.497521 8_1:+21091124 None:intergenic
CACAGGATCCAGACATGGCT+TGG 0.497637 8_1:-21092828 Msa1184900:intron
GGAAACATGGTCCCACCACC+CGG 0.500756 8_1:+21096408 None:intergenic
AAGTTGATAAATCTTAAAGA+TGG 0.500800 8_1:-21096351 Msa1184900:CDS
CCGCTATTGATACTGGTTGT+GGG 0.500830 8_1:-21096317 Msa1184900:CDS
ATTAGTAGTGAAAGTTTGCA+AGG 0.501435 8_1:-21091994 Msa1184900:CDS
GGAGGAGGAGGAAGGTTGAG+AGG 0.502703 8_1:+21096833 None:intergenic
GGATTTGAAAGTGTGAAGTA+GGG 0.505287 8_1:+21096995 None:intergenic
CGTTGATTACATCTGGCAGT+GGG 0.506759 8_1:+21092082 None:intergenic
AGAGGTGGTGATGGAGTAAC+CGG 0.507088 8_1:+21096851 None:intergenic
TCTCAGCTAGCTGAGAATCA+AGG 0.507425 8_1:+21091905 None:intergenic
GTATGCAAATGTGCCACATA+AGG 0.507622 8_1:-21096493 Msa1184900:CDS
TTGGTTTCTGCCATATTGCA+AGG 0.507652 8_1:+21092914 None:intergenic
TGGAGTTGTGGTGGCTGTGA+TGG 0.508915 8_1:+21096779 None:intergenic
GTTTGAAGATTAGGTGTAAG+TGG 0.512111 8_1:+21097116 None:intergenic
TTCAAGAGCAAATTGAACTT+GGG 0.512225 8_1:+21093947 None:intergenic
GGTTCAGGTTCCCGGGTGGT+GGG 0.512597 8_1:-21096419 Msa1184900:CDS
TACTGTTGTTGTTGTTATGG+TGG 0.517996 8_1:+21096802 None:intergenic
ATTCCTATCATTACCTGTGT+TGG 0.518933 8_1:+21091069 None:intergenic
ACATTCTTCTGGAGATGGAC+CGG 0.518946 8_1:-21090798 Msa1184900:CDS
CGGAGAGCCGTGACGCGGCA+TGG 0.519065 8_1:-21096515 Msa1184900:CDS
CGAACTTATGACTTCATACA+TGG 0.519679 8_1:-21091113 Msa1184900:CDS
CCCTGACCCACCACCAAAGA+CGG 0.519722 8_1:-21096727 Msa1184900:CDS
TTGATATGGCTCACTGCTCA+AGG 0.520634 8_1:-21093860 Msa1184900:CDS
GAGGCTGAAATTAATACTCT+TGG 0.521230 8_1:-21091781 Msa1184900:CDS
TCCACGGTTAACTCCTTATG+TGG 0.521273 8_1:+21096480 None:intergenic
ACCCTTCTGTGAAGAAGCAC+AGG 0.521524 8_1:-21092845 Msa1184900:CDS
GAAACACGCGCCGTCTTTGG+TGG 0.525721 8_1:+21096717 None:intergenic
AATGGTAACCGGTAACCAAA+CGG 0.526104 8_1:+21096546 None:intergenic
AAGCATATGGAGGAGGAGGA+AGG 0.528726 8_1:+21096825 None:intergenic
CAATAAGCTGGCAGAAACAC+TGG 0.529239 8_1:-21093038 Msa1184900:CDS
GCGGAGATGACGGTGGTGGA+AGG 0.532130 8_1:+21096876 None:intergenic
GGTGATGGAGTAACCGGTGG+CGG 0.532278 8_1:+21096857 None:intergenic
TGTCAGGGCCACCAATAAGC+TGG 0.534597 8_1:-21093050 Msa1184900:CDS
GAAAGGATGGGAAAGGACTA+GGG 0.536217 8_1:-21093016 Msa1184900:CDS
AGGAACCGGTTCAGGTTCCC+GGG 0.536229 8_1:-21096426 Msa1184900:CDS
CACGCGCCGTCTTTGGTGGT+GGG 0.537605 8_1:+21096721 None:intergenic
TGAACCGGTTCCTATTGAAT+CGG 0.538880 8_1:+21096436 None:intergenic
TGTAGAATACCAGCTCCGTT+TGG 0.539019 8_1:-21096561 Msa1184900:CDS
CATGCCGCGTCACGGCTCTC+CGG 0.540189 8_1:+21096516 None:intergenic
GATAGTGATGCCAGAGACCA+AGG 0.542805 8_1:+21096898 None:intergenic
CAATATCAGGTGGCAAGTTG+GGG 0.543071 8_1:-21094032 Msa1184900:intron
TCCTGTGCTTCTTCACAGAA+GGG 0.543718 8_1:+21092844 None:intergenic
GGGTCCGATTCAATAGGAAC+CGG 0.543757 8_1:-21096440 Msa1184900:CDS
GGAGAACATTCTTCTGGAGA+TGG 0.545202 8_1:-21090803 Msa1184900:CDS
GTCAGGGAGGTGGTGAGTGG+CGG 0.549270 8_1:+21096743 None:intergenic
CATGAACATTGTTCCTGTTG+AGG 0.551321 8_1:-21091800 Msa1184900:CDS
CGCTATTGATACTGGTTGTG+GGG 0.552452 8_1:-21096316 Msa1184900:intron
CTCAGCTAGCTGAGAATCAA+GGG 0.555393 8_1:+21091906 None:intergenic
ATTTGCGCCACGTGGAAACA+TGG 0.556653 8_1:+21096395 None:intergenic
TTGCAGTGCATATGATTGGT+TGG 0.557571 8_1:+21092895 None:intergenic
AGAATTAGAGACCATGAAGA+AGG 0.559942 8_1:-21090682 Msa1184900:CDS
GGTGGCGGAGATGACGGTGG+TGG 0.560421 8_1:+21096872 None:intergenic
GTGGATACTGGATTCTGTCA+GGG 0.560463 8_1:-21093065 Msa1184900:CDS
CTCCATGTGAGGATCAGAAA+AGG 0.560730 8_1:-21096656 Msa1184900:CDS
ACCACCGTCATCTCCGCCAC+CGG 0.564856 8_1:-21096870 Msa1184900:CDS
ATGGTGGAAGCATATGGAGG+AGG 0.566141 8_1:+21096818 None:intergenic
CTACACCGGAGAGTTTCCTC+TGG 0.566315 8_1:+21096579 None:intergenic
CCGGTTACCATTACGGTGGC+CGG 0.566750 8_1:-21096535 Msa1184900:CDS
CATACTGTCCCCAAGGAATG+AGG 0.567067 8_1:+21093835 None:intergenic
AGTTGATAAATCTTAAAGAT+GGG 0.567309 8_1:-21096350 Msa1184900:CDS
GGAGGAGGAAGGTTGAGAGG+TGG 0.567587 8_1:+21096836 None:intergenic
ATCAACGTCAAAGAAGTTGC+TGG 0.568268 8_1:-21092066 Msa1184900:CDS
GCAAGAATTCCAATCAAAGC+CGG 0.571425 8_1:+21093915 None:intergenic
GTAACCGGTGGCGGAGATGA+CGG 0.576488 8_1:+21096866 None:intergenic
GAGACCAAGGAAGTAAAAGA+AGG 0.586234 8_1:+21096911 None:intergenic
AGTTCGTGGGTAAGTGGACA+TGG 0.592832 8_1:+21091130 None:intergenic
CGGAGAGTTTCCTCTGGTAA+GGG 0.593090 8_1:+21096585 None:intergenic
TTCTAGTGATGGAGTTGTGG+TGG 0.593855 8_1:+21096770 None:intergenic
ACGTATGCATTTGCGCCACG+TGG 0.597146 8_1:+21096387 None:intergenic
AGAGTGATGGTTCACATGGT+GGG 0.602380 8_1:+21096688 None:intergenic
GTTGATAGATTACTGCGTCC+TGG 0.603810 8_1:-21093087 Msa1184900:CDS
TAGAGTGATGGTTCACATGG+TGG 0.604125 8_1:+21096687 None:intergenic
TGTATGAAGTCATAAGTTCG+TGG 0.612720 8_1:+21091116 None:intergenic
GTTCAATTTGCTCTTGAACG+AGG 0.614431 8_1:-21093942 Msa1184900:CDS
TTGCATACCATGCCGCGTCA+CGG 0.616226 8_1:+21096508 None:intergenic
TGCCCTAGCAAATAGAAGCA+AGG 0.620430 8_1:+21091711 None:intergenic
GGAGTGTATTCATAGAGTGA+TGG 0.621035 8_1:+21096675 None:intergenic
AACGTCAAAGAAGTTGCTGG+TGG 0.622412 8_1:-21092063 Msa1184900:CDS
AATGTACCATACTGTCCCCA+AGG 0.624070 8_1:+21093828 None:intergenic
GTATGAAGTCATAAGTTCGT+GGG 0.624591 8_1:+21091117 None:intergenic
ACAAGATGCAATTGAGAATG+TGG 0.625101 8_1:-21092977 Msa1184900:CDS
GAAACATGGTCCCACCACCC+GGG 0.628660 8_1:+21096409 None:intergenic
TCAAGGTGCCTCATTCCTTG+GGG 0.628784 8_1:-21093843 Msa1184900:CDS
GCAGAAACACTGGAAAGGAT+GGG 0.629695 8_1:-21093028 Msa1184900:CDS
TCATAGAGTGATGGTTCACA+TGG 0.629733 8_1:+21096684 None:intergenic
CCTTACCAGAGGAAACTCTC+CGG 0.629789 8_1:-21096584 Msa1184900:CDS
GACAGAATCCAGTATCCACC+AGG 0.632745 8_1:+21093069 None:intergenic
GAATTCTAGTGATGGAGTTG+TGG 0.634693 8_1:+21096767 None:intergenic
GTAAGGGACAGTGTCTCTCA+CGG 0.634829 8_1:+21096601 None:intergenic
AACACTGGAAAGGATGGGAA+AGG 0.634984 8_1:-21093023 Msa1184900:CDS
AGCTGGCAGAAACACTGGAA+AGG 0.639833 8_1:-21093033 Msa1184900:CDS
GTGGCCGGAGAGCCGTGACG+CGG 0.641029 8_1:-21096520 Msa1184900:CDS
CTTGGTGTCATATATGAACG+TGG 0.642336 8_1:-21091763 Msa1184900:CDS
TCTTTGGTGGTGGGTCAGGG+AGG 0.645638 8_1:+21096730 None:intergenic
ACGGAGCTGGTATTCTACAC+CGG 0.646040 8_1:+21096565 None:intergenic
GCATTGCAGATGAAATGCAG+TGG 0.646503 8_1:-21090711 Msa1184900:CDS
CTATGAATACACTCCATGTG+AGG 0.647630 8_1:-21096667 Msa1184900:CDS
AGAAGCACAGGATCCAGACA+TGG 0.654458 8_1:-21092833 Msa1184900:CDS
CATTGCAGATGAAATGCAGT+GGG 0.662717 8_1:-21090710 Msa1184900:CDS
AACCGGTTCAGGTTCCCGGG+TGG 0.664201 8_1:-21096423 Msa1184900:CDS
ACTTTCACTACTAATCCTTG+GGG 0.665310 8_1:+21092002 None:intergenic
TGAGCAGTGAGCCATATCAA+AGG 0.666508 8_1:+21093863 None:intergenic
GTGGCGGTGAATTCTAGTGA+TGG 0.670837 8_1:+21096759 None:intergenic
GGTGGTGATGGAGTAACCGG+TGG 0.680084 8_1:+21096854 None:intergenic
TGAAGATTAGGTGTAAGTGG+TGG 0.681621 8_1:+21097119 None:intergenic
CTTTCACTACTAATCCTTGG+GGG 0.685892 8_1:+21092003 None:intergenic
GATAGATTACTGCGTCCTGG+TGG 0.687581 8_1:-21093084 Msa1184900:CDS
GTTATGGTGGAAGCATATGG+AGG 0.688651 8_1:+21096815 None:intergenic
ACCGGTGGCGGAGATGACGG+TGG 0.706903 8_1:+21096869 None:intergenic
GCCACATAAGGAGTTAACCG+TGG 0.710075 8_1:-21096481 Msa1184900:CDS
GTTGATTACATCTGGCAGTG+GGG 0.716915 8_1:+21092083 None:intergenic
CTGGTGGAGAAATATCAAAG+TGG 0.719175 8_1:-21092047 Msa1184900:CDS
GTTACCGGTTACCATTACGG+TGG 0.720599 8_1:-21096539 Msa1184900:CDS
GAGACACTGTCCCTTACCAG+AGG 0.729562 8_1:-21096595 Msa1184900:CDS
GTGATGGTTCACATGGTGGG+AGG 0.729763 8_1:+21096691 None:intergenic
CCCACAACCAGTATCAATAG+CGG 0.733656 8_1:+21096317 None:intergenic
CAATGTAGATGTGTTGACGA+AGG 0.740038 8_1:-21090740 Msa1184900:CDS
GGTGGGACCATGTTTCCACG+TGG 0.744968 8_1:-21096402 Msa1184900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAATATATTTAATTTT+GGG + chr8_1:21092289-21092308 None:intergenic 0.0%
!!! TTTTTAAATATATTTAATTT+TGG + chr8_1:21092290-21092309 None:intergenic 0.0%
!! ATAATTATAATATATTATTA+TGG + chr8_1:21092560-21092579 None:intergenic 0.0%
!!! TAATAATATATTTGGTTTTT+TGG + chr8_1:21090580-21090599 None:intergenic 10.0%
!!! AGATTTGTTAATAATATATT+TGG + chr8_1:21090588-21090607 None:intergenic 10.0%
!! AAGATCATATAATAATATTA+TGG - chr8_1:21091481-21091500 Msa1184900:intron 10.0%
!! AGATCATATAATAATATTAT+GGG - chr8_1:21091482-21091501 Msa1184900:intron 10.0%
!! AATAAATAAAAAAACAAGTT+TGG + chr8_1:21092521-21092540 None:intergenic 10.0%
!!! CTTTTTAATTAATTTTGTTA+AGG + chr8_1:21092911-21092930 None:intergenic 10.0%
!!! TAATCATATTTTTTTTTTAC+AGG + chr8_1:21093860-21093879 None:intergenic 10.0%
!! GTAAAAAAAAAATATGATTA+AGG - chr8_1:21093860-21093879 Msa1184900:CDS 10.0%
!!! ATTAAATATTTTTACCTATG+AGG - chr8_1:21091347-21091366 Msa1184900:intron 15.0%
!! ACAAATATAGAAATTTAAGT+CGG + chr8_1:21091444-21091463 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr8_1:21092215-21092234 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr8_1:21092214-21092233 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr8_1:21092123-21092142 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr8_1:21092023-21092042 Msa1184900:CDS 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr8_1:21092214-21092233 Msa1184900:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr8_1:21092215-21092234 Msa1184900:intron 15.0%
!!! ATTTAAAAAGTTAGCTTTAA+TGG - chr8_1:21092301-21092320 Msa1184900:intron 15.0%
!! AATACATAAATAGCTAAAAA+GGG + chr8_1:21092627-21092646 None:intergenic 15.0%
!! TAATACATAAATAGCTAAAA+AGG + chr8_1:21092628-21092647 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG + chr8_1:21093075-21093094 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr8_1:21093178-21093197 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr8_1:21093202-21093221 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr8_1:21093201-21093220 Msa1184900:intron 15.0%
!! TTGTAATTTATTACAATATC+AGG - chr8_1:21093506-21093525 Msa1184900:intron 15.0%
!!! ATTTTAGGAATTAGTAATAT+AGG + chr8_1:21093810-21093829 None:intergenic 15.0%
!!! TATCATATATACATGATTTT+AGG + chr8_1:21093825-21093844 None:intergenic 15.0%
!! ATGTATATATGATATGATTA+AGG - chr8_1:21093831-21093850 Msa1184900:intron 15.0%
!! TGTATATATGATATGATTAA+GGG - chr8_1:21093832-21093851 Msa1184900:intron 15.0%
!!! AATTTATTTTCTCGAATTAT+TGG - chr8_1:21094290-21094309 Msa1184900:intron 15.0%
!! TCATAAAAAAGCAAATTAAT+AGG + chr8_1:21094843-21094862 None:intergenic 15.0%
!!! AAAATATAAAAGTAGCTTTT+AGG - chr8_1:21096112-21096131 Msa1184900:intron 15.0%
!! AAATTGAAAAGTGAAATTTA+AGG - chr8_1:21096326-21096345 Msa1184900:CDS 15.0%
!! TCATATTATACTATAAAAGT+AGG + chr8_1:21096538-21096557 None:intergenic 15.0%
!!! AAGTTGATAAATCTTAAAGA+TGG - chr8_1:21091200-21091219 Msa1184900:intron 20.0%
!!! AGTTGATAAATCTTAAAGAT+GGG - chr8_1:21091201-21091220 Msa1184900:intron 20.0%
!! AAATATTTAATTGAACCAAC+CGG + chr8_1:21091338-21091357 None:intergenic 20.0%
!! TAAAATGTATATACATAGTC+AGG + chr8_1:21091703-21091722 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr8_1:21092058-21092077 Msa1184900:CDS 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr8_1:21092152-21092171 Msa1184900:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr8_1:21092153-21092172 Msa1184900:intron 20.0%
!!! TTTTTGTTTTTATCTCTTTC+TGG - chr8_1:21092325-21092344 Msa1184900:intron 20.0%
!! GAAAAAAGAAAAACATTCTT+TGG + chr8_1:21092369-21092388 None:intergenic 20.0%
!! AAAAAAAAATCCAATCATTG+AGG + chr8_1:21092446-21092465 None:intergenic 20.0%
!! ATACATAAATAGCTAAAAAG+GGG + chr8_1:21092626-21092645 None:intergenic 20.0%
!!! AATTAATTTTGTTAAGGTGA+TGG + chr8_1:21092905-21092924 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr8_1:21093115-21093134 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr8_1:21093192-21093211 Msa1184900:intron 20.0%
!! AATGAGAAACATTAATGTAT+TGG + chr8_1:21093436-21093455 None:intergenic 20.0%
!! TAATTTATTACAATATCAGG+TGG - chr8_1:21093509-21093528 Msa1184900:intron 20.0%
!! AAAATCAAACCAACATTATT+TGG - chr8_1:21093904-21093923 Msa1184900:CDS 20.0%
!! TTAAAGATAAGCAAAAAATG+TGG - chr8_1:21093966-21093985 Msa1184900:CDS 20.0%
!! TTCAATACTCACTATATTAT+TGG - chr8_1:21094105-21094124 Msa1184900:intron 20.0%
!! TGGAAAAAATTAGTACAAAA+AGG - chr8_1:21094611-21094630 Msa1184900:intron 20.0%
!! AACTAAAGTTTCTATGTATT+AGG + chr8_1:21094804-21094823 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr8_1:21094961-21094980 Msa1184900:intron 20.0%
!! AAAATTAAAACCAACTTGTA+AGG + chr8_1:21095096-21095115 None:intergenic 20.0%
!! TACATGATAGAAAAAATCAT+TGG + chr8_1:21095378-21095397 None:intergenic 20.0%
!!! CAGATGAAATAATTTTTGAT+CGG + chr8_1:21095963-21095982 None:intergenic 20.0%
!! GATCAAAAATTATTTCATCT+GGG - chr8_1:21095962-21095981 Msa1184900:intron 20.0%
!! TCATACTGAAAAACTAATTA+GGG + chr8_1:21096141-21096160 None:intergenic 20.0%
!! ATCATACTGAAAAACTAATT+AGG + chr8_1:21096142-21096161 None:intergenic 20.0%
!!! AAAAGTGTTAATAAACAACT+TGG + chr8_1:21096165-21096184 None:intergenic 20.0%
!!! TAACACTTTTTAAATAGTCA+TGG - chr8_1:21096175-21096194 Msa1184900:intron 20.0%
!! TCTTTGGTTAATTGAATATT+AGG - chr8_1:21096686-21096705 Msa1184900:CDS 20.0%
!!! TTCTTTCAAACACTAATTTT+TGG - chr8_1:21097019-21097038 Msa1184900:exon 20.0%
!!! TAAGAGAAATTTTGTTCATA+TGG - chr8_1:21097054-21097073 Msa1184900:five_prime_UTR 20.0%
! TTTCTTGTTCTTGTAGTTTA+AGG + chr8_1:21090498-21090517 None:intergenic 25.0%
! AATAAACCCAACAGAAAAAA+CGG + chr8_1:21091285-21091304 None:intergenic 25.0%
! TATAGAAATTTAAGTCGGTT+AGG + chr8_1:21091439-21091458 None:intergenic 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr8_1:21091863-21091882 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr8_1:21091864-21091883 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+CGG - chr8_1:21092186-21092205 Msa1184900:intron 25.0%
!! CTAATTCAATCATTGAGTTT+TGG + chr8_1:21092474-21092493 None:intergenic 25.0%
! TACATAAATAGCTAAAAAGG+GGG + chr8_1:21092625-21092644 None:intergenic 25.0%
! GTCTTTCACAATACATATAA+GGG + chr8_1:21092706-21092725 None:intergenic 25.0%
! TGTCTTTCACAATACATATA+AGG + chr8_1:21092707-21092726 None:intergenic 25.0%
! CATATCATATTCCCAATATA+TGG - chr8_1:21092725-21092744 Msa1184900:intron 25.0%
! ATATTCCCAATATATGGTAA+AGG - chr8_1:21092731-21092750 Msa1184900:intron 25.0%
! AGTTTCCTTTACCATATATT+GGG + chr8_1:21092739-21092758 None:intergenic 25.0%
! TAGTTTCCTTTACCATATAT+TGG + chr8_1:21092740-21092759 None:intergenic 25.0%
!! TTCTTTTGCATATTCCTTTT+TGG - chr8_1:21092958-21092977 Msa1184900:CDS 25.0%
!! TCTTTTGCATATTCCTTTTT+GGG - chr8_1:21092959-21092978 Msa1184900:CDS 25.0%
! TACATCTTAATATCTTTGGT+TGG + chr8_1:21093407-21093426 None:intergenic 25.0%
! GGTTTACATCTTAATATCTT+TGG + chr8_1:21093411-21093430 None:intergenic 25.0%
!! AGAAACATTAATGTATTGGT+TGG + chr8_1:21093432-21093451 None:intergenic 25.0%
! TTAATGTTTCTCATTCATAG+AGG - chr8_1:21093441-21093460 Msa1184900:intron 25.0%
! ACAAACACATTCAATGATTA+AGG - chr8_1:21093781-21093800 Msa1184900:intron 25.0%
! CAAACACATTCAATGATTAA+GGG - chr8_1:21093782-21093801 Msa1184900:intron 25.0%
! TCTTAATGTCCAAATAATGT+TGG + chr8_1:21093916-21093935 None:intergenic 25.0%
!!! TATTAGATTGTAGCTTTAGT+TGG - chr8_1:21094761-21094780 Msa1184900:intron 25.0%
!!! ATTTGCTTTTTTATGAAGCA+CGG - chr8_1:21094847-21094866 Msa1184900:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG + chr8_1:21094936-21094955 None:intergenic 25.0%
! TGTGAAATATGTTTACAAGT+GGG - chr8_1:21095058-21095077 Msa1184900:intron 25.0%
! CACATACTATCTCAAAATTT+GGG + chr8_1:21095127-21095146 None:intergenic 25.0%
! TCACATACTATCTCAAAATT+TGG + chr8_1:21095128-21095147 None:intergenic 25.0%
! GGATAGAAATTCTCAAAATT+TGG + chr8_1:21095343-21095362 None:intergenic 25.0%
! TTTGAGAATTTCTATCCAAT+AGG - chr8_1:21095346-21095365 Msa1184900:intron 25.0%
! TTGAGAATTTCTATCCAATA+GGG - chr8_1:21095347-21095366 Msa1184900:intron 25.0%
! TCAAAGAAAATACTGAGTTA+TGG - chr8_1:21095597-21095616 Msa1184900:intron 25.0%
! CTTGATATGAATTCTTACTT+AGG - chr8_1:21095689-21095708 Msa1184900:intron 25.0%
!!! TCGGACTTTATATACTTTTT+CGG + chr8_1:21095944-21095963 None:intergenic 25.0%
! CGATCAAAAATTATTTCATC+TGG - chr8_1:21095961-21095980 Msa1184900:intron 25.0%
!! AGAATCTGAAACAATAGTAA+AGG + chr8_1:21096287-21096306 None:intergenic 25.0%
! TAGGAATCAATTTGATGTAT+TGG - chr8_1:21096498-21096517 Msa1184900:CDS 25.0%
!! AGTATCTTTTCACTTTGATA+AGG + chr8_1:21096896-21096915 None:intergenic 25.0%
! GTTTATGACAAAACTTTCAT+AGG - chr8_1:21096989-21097008 Msa1184900:CDS 25.0%
!!! CAAACACTAATTTTTGGTTT+TGG - chr8_1:21097025-21097044 Msa1184900:exon 25.0%
! TGATAATCTTCAAGATGTTA+AGG + chr8_1:21097082-21097101 None:intergenic 25.0%
! ATGAGTTGAGTTTGAAGATT+AGG + chr8_1:21090447-21090466 None:intergenic 30.0%
GGTACATAAGAAAAATGCAA+AGG + chr8_1:21090622-21090641 None:intergenic 30.0%
GGTAGATAAGTTTCTTTCTA+GGG + chr8_1:21090932-21090951 None:intergenic 30.0%
!! AATGCATACGTTGATGATAT+TGG - chr8_1:21091176-21091195 Msa1184900:intron 30.0%
!! ATGCATACGTTGATGATATT+GGG - chr8_1:21091177-21091196 Msa1184900:intron 30.0%
AAACGGTTCAAGAAGAATTT+AGG + chr8_1:21091268-21091287 None:intergenic 30.0%
!!! TTCTGTTGGGTTTATTTTTG+TGG - chr8_1:21091289-21091308 Msa1184900:intron 30.0%
GAAAATTGTCATAACCTCAT+AGG + chr8_1:21091364-21091383 None:intergenic 30.0%
! TTAGTGCAAATTTTGTTGAC+AGG + chr8_1:21091572-21091591 None:intergenic 30.0%
TGTATATACATAGTCAGGTT+CGG + chr8_1:21091698-21091717 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr8_1:21092246-21092265 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr8_1:21092245-21092264 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr8_1:21091926-21091945 Msa1184900:CDS 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr8_1:21092245-21092264 Msa1184900:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr8_1:21092246-21092265 Msa1184900:intron 30.0%
! TTTATCTCTTTCTGGTAAGA+AGG - chr8_1:21092333-21092352 Msa1184900:intron 30.0%
!! ATTCAATCATTGAGTTTTGG+CGG + chr8_1:21092471-21092490 None:intergenic 30.0%
AAGGAAACTAATAGAGAGAA+AGG - chr8_1:21092750-21092769 Msa1184900:intron 30.0%
GAGAAAGGAAAAAAAAGTCT+TGG - chr8_1:21092765-21092784 Msa1184900:intron 30.0%
AGGAAAAAAAAGTCTTGGAT+AGG - chr8_1:21092770-21092789 Msa1184900:intron 30.0%
ATTACGTTTACCTTACTCTA+AGG + chr8_1:21092819-21092838 None:intergenic 30.0%
TGGAGTGATATCTTATCTTA+AGG + chr8_1:21092885-21092904 None:intergenic 30.0%
! GAAAAAGGGTCATTTGAAAT+TGG - chr8_1:21092930-21092949 Msa1184900:CDS 30.0%
ACAAATATGACATCCCAAAA+AGG + chr8_1:21092975-21092994 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr8_1:21093283-21093302 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr8_1:21093284-21093303 Msa1184900:intron 30.0%
ACTCACATCTATTAACATCA+CGG - chr8_1:21093327-21093346 Msa1184900:intron 30.0%
CTTAATATCTTTGGTTGGAT+TGG + chr8_1:21093402-21093421 None:intergenic 30.0%
TTCAAGAGCAAATTGAACTT+GGG + chr8_1:21093607-21093626 None:intergenic 30.0%
TTGGAATTCTTGCTTCAATA+AGG - chr8_1:21093646-21093665 Msa1184900:intron 30.0%
AATACTCTACAAGACGAAAA+TGG - chr8_1:21094253-21094272 Msa1184900:intron 30.0%
! CATGACACTAAATTTGTTTC+TGG - chr8_1:21094396-21094415 Msa1184900:intron 30.0%
ATGTATTAGGTACTTCATAG+AGG + chr8_1:21094791-21094810 None:intergenic 30.0%
ACACAATATTCAATCCAATG+CGG + chr8_1:21095041-21095060 None:intergenic 30.0%
GTGTGAAATATGTTTACAAG+TGG - chr8_1:21095057-21095076 Msa1184900:intron 30.0%
TGAGTCTATCCAAAATTTGT+TGG - chr8_1:21095145-21095164 Msa1184900:intron 30.0%
ACATCTCTCATCTTATTAGT+CGG - chr8_1:21095291-21095310 Msa1184900:intron 30.0%
AACTTTCACTACTAATCCTT+GGG + chr8_1:21095553-21095572 None:intergenic 30.0%
AAACTTTCACTACTAATCCT+TGG + chr8_1:21095554-21095573 None:intergenic 30.0%
ATTAGTAGTGAAAGTTTGCA+AGG - chr8_1:21095557-21095576 Msa1184900:intron 30.0%
GATATGAATTCTTACTTAGG+AGG - chr8_1:21095692-21095711 Msa1184900:intron 30.0%
TCATTGGAACCTATCAAAAT+TGG - chr8_1:21095813-21095832 Msa1184900:intron 30.0%
TTTCATAAAGCTGCTATTAG+TGG + chr8_1:21096206-21096225 None:intergenic 30.0%
ACATCTGTGACACATTAATT+TGG + chr8_1:21096723-21096742 None:intergenic 30.0%
TGTCTTATGTCTCAATGATT+TGG - chr8_1:21097190-21097209 Msa1184900:intron 30.0%
GTCTTATGTCTCAATGATTT+GGG - chr8_1:21097191-21097210 Msa1184900:intron 30.0%
GTTTGAAGATTAGGTGTAAG+TGG + chr8_1:21090438-21090457 None:intergenic 35.0%
! GGATTTGAAAGTGTGAAGTA+GGG + chr8_1:21090559-21090578 None:intergenic 35.0%
! TGGATTTGAAAGTGTGAAGT+AGG + chr8_1:21090560-21090579 None:intergenic 35.0%
! TGTACCTTCTTTTACTTCCT+TGG - chr8_1:21090636-21090655 Msa1184900:CDS 35.0%
! TACTGTTGTTGTTGTTATGG+TGG + chr8_1:21090752-21090771 None:intergenic 35.0%
! TGGTACTGTTGTTGTTGTTA+TGG + chr8_1:21090755-21090774 None:intergenic 35.0%
CGGTAGATAAGTTTCTTTCT+AGG + chr8_1:21090933-21090952 None:intergenic 35.0%
!!! TCTTGAACCGTTTTTTCTGT+TGG - chr8_1:21091275-21091294 Msa1184900:intron 35.0%
!!! CTTGAACCGTTTTTTCTGTT+GGG - chr8_1:21091276-21091295 Msa1184900:intron 35.0%
!!! GGGTTTATTTTTGTGGTTGT+AGG - chr8_1:21091296-21091315 Msa1184900:intron 35.0%
! ATTTTTGTGGTTGTAGGAAC+TGG - chr8_1:21091302-21091321 Msa1184900:intron 35.0%
TCACTCTGCACAAAATGTTT+GGG - chr8_1:21091395-21091414 Msa1184900:intron 35.0%
TTAAGTCGGTTAGGTCAATT+TGG + chr8_1:21091430-21091449 None:intergenic 35.0%
!! TTTGTGAAAAGTGCTTGAAC+TGG - chr8_1:21091646-21091665 Msa1184900:intron 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr8_1:21092230-21092249 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr8_1:21092230-21092249 Msa1184900:intron 35.0%
AGCTTCATGCTTACAAATTG+AGG + chr8_1:21092417-21092436 None:intergenic 35.0%
!!! AGCTTTTTTGCCTCAATGAT+TGG - chr8_1:21092433-21092452 Msa1184900:intron 35.0%
! TACCTTACTCTAAGGATAGT+GGG + chr8_1:21092811-21092830 None:intergenic 35.0%
! TTACCTTACTCTAAGGATAG+TGG + chr8_1:21092812-21092831 None:intergenic 35.0%
TGAATCTATGTGCTCTACAT+TGG - chr8_1:21092999-21093018 Msa1184900:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + chr8_1:21093149-21093168 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + chr8_1:21093153-21093172 None:intergenic 35.0%
CTCACATCTATTAACATCAC+GGG - chr8_1:21093328-21093347 Msa1184900:intron 35.0%
GTTCAAGAGCAAATTGAACT+TGG + chr8_1:21093608-21093627 None:intergenic 35.0%
ATTCGAGACGTTACTTAACA+AGG + chr8_1:21093939-21093958 None:intergenic 35.0%
GTTTGAAAATACGACACCTT+TGG + chr8_1:21094009-21094028 None:intergenic 35.0%
!! GAGTATTGAAAAAAGTGCGT+TGG + chr8_1:21094095-21094114 None:intergenic 35.0%
ATTCATGTGAATTCCACGAT+TGG - chr8_1:21094133-21094152 Msa1184900:intron 35.0%
TTTCTTTATCGTACCAATCG+TGG + chr8_1:21094149-21094168 None:intergenic 35.0%
GCTTAATTCACAATGCTGAT+TGG - chr8_1:21094418-21094437 Msa1184900:intron 35.0%
ACAAGATGCAATTGAGAATG+TGG - chr8_1:21094574-21094593 Msa1184900:intron 35.0%
AAAAAGGTGACCTTGCAATA+TGG - chr8_1:21094627-21094646 Msa1184900:intron 35.0%
AACTTTGCAGTGCATATGAT+TGG + chr8_1:21094663-21094682 None:intergenic 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr8_1:21094967-21094986 Msa1184900:intron 35.0%
CACAATATTCAATCCAATGC+GGG + chr8_1:21095040-21095059 None:intergenic 35.0%
AAATCTCTCACCTTACAAGT+TGG - chr8_1:21095083-21095102 Msa1184900:intron 35.0%
GAATTTCTATCCAATAGGGT+TGG - chr8_1:21095351-21095370 Msa1184900:intron 35.0%
!! ACATCAACCTTTTTCATTGC+AGG - chr8_1:21095420-21095439 Msa1184900:intron 35.0%
TTGTGTACCTGCAATGAAAA+AGG + chr8_1:21095430-21095449 None:intergenic 35.0%
! TCTTTGACGTTGATTACATC+TGG + chr8_1:21095479-21095498 None:intergenic 35.0%
! GGAATTGAAGTTAGTCTCTT+TGG + chr8_1:21095530-21095549 None:intergenic 35.0%
ACTTTCACTACTAATCCTTG+GGG + chr8_1:21095552-21095571 None:intergenic 35.0%
!! ACTAGTTGATGATCCTGTTT+GGG - chr8_1:21095727-21095746 Msa1184900:intron 35.0%
GTATTAATTTCAGCCTCAAC+AGG + chr8_1:21095767-21095786 None:intergenic 35.0%
GAGGCTGAAATTAATACTCT+TGG - chr8_1:21095770-21095789 Msa1184900:intron 35.0%
ATATATGAACGTGGACTCAT+TGG - chr8_1:21095797-21095816 Msa1184900:intron 35.0%
!! CAAGGCATACCAATTTTGAT+AGG + chr8_1:21095825-21095844 None:intergenic 35.0%
AGTTTGTCCTAAAAATCGGA+GGG + chr8_1:21095898-21095917 None:intergenic 35.0%
TGCCAGTTTGTCCTAAAAAT+CGG + chr8_1:21095902-21095921 None:intergenic 35.0%
! ATTTCATCTGGGATTCAAAC+TGG - chr8_1:21095973-21095992 Msa1184900:intron 35.0%
GAATTTCAGTGAGTGAATGT+CGG + chr8_1:21096015-21096034 None:intergenic 35.0%
TAGTGAATGACAAGCAACAT+TGG - chr8_1:21096079-21096098 Msa1184900:intron 35.0%
ATAAAGCTGCTATTAGTGGT+AGG + chr8_1:21096202-21096221 None:intergenic 35.0%
AAACATTTGTCCTAAGCATG+TGG - chr8_1:21096350-21096369 Msa1184900:CDS 35.0%
TTCTTAACTACCACATGCTT+AGG + chr8_1:21096363-21096382 None:intergenic 35.0%
!! TACTACTTTTGTCTTGTCTC+AGG - chr8_1:21096391-21096410 Msa1184900:CDS 35.0%
GTATGAAGTCATAAGTTCGT+GGG + chr8_1:21096437-21096456 None:intergenic 35.0%
TGTATGAAGTCATAAGTTCG+TGG + chr8_1:21096438-21096457 None:intergenic 35.0%
CGAACTTATGACTTCATACA+TGG - chr8_1:21096438-21096457 Msa1184900:CDS 35.0%
ATTCCTATCATTACCTGTGT+TGG + chr8_1:21096485-21096504 None:intergenic 35.0%
GAAAACACGCGTAATATCTT+TGG - chr8_1:21096670-21096689 Msa1184900:CDS 35.0%
AATGTGTCACAGATGTAGTA+TGG - chr8_1:21096727-21096746 Msa1184900:CDS 35.0%
TAGTATGGAGAACATTCTTC+TGG - chr8_1:21096742-21096761 Msa1184900:CDS 35.0%
AGAATTAGAGACCATGAAGA+AGG - chr8_1:21096869-21096888 Msa1184900:CDS 35.0%
TTTGATAAGGTCCTTCTTCA+TGG + chr8_1:21096883-21096902 None:intergenic 35.0%
CATTGAGACATAAGACAACT+TGG + chr8_1:21097187-21097206 None:intergenic 35.0%
TGAAGATTAGGTGTAAGTGG+TGG + chr8_1:21090435-21090454 None:intergenic 40.0%
GAGACCAAGGAAGTAAAAGA+AGG + chr8_1:21090643-21090662 None:intergenic 40.0%
! TCTTTTACTTCCTTGGTCTC+TGG - chr8_1:21090643-21090662 Msa1184900:CDS 40.0%
! GTTGTTATGGTGGAAGCATA+TGG + chr8_1:21090742-21090761 None:intergenic 40.0%
! GAATTCTAGTGATGGAGTTG+TGG + chr8_1:21090787-21090806 None:intergenic 40.0%
TCATAGAGTGATGGTTCACA+TGG + chr8_1:21090870-21090889 None:intergenic 40.0%
GGAGTGTATTCATAGAGTGA+TGG + chr8_1:21090879-21090898 None:intergenic 40.0%
CTATGAATACACTCCATGTG+AGG - chr8_1:21090884-21090903 Msa1184900:intron 40.0%
AATGGTAACCGGTAACCAAA+CGG + chr8_1:21091008-21091027 None:intergenic 40.0%
! TTGGTTACCGGTTACCATTA+CGG - chr8_1:21091009-21091028 Msa1184900:intron 40.0%
GTATGCAAATGTGCCACATA+AGG - chr8_1:21091058-21091077 Msa1184900:intron 40.0%
!!! GTTCTGGTTTTTCTTCTCCA+CGG + chr8_1:21091090-21091109 None:intergenic 40.0%
TGGAGAAGAAAAACCAGAAC+TGG - chr8_1:21091090-21091109 Msa1184900:CDS 40.0%
GGAGAAGAAAAACCAGAACT+GGG - chr8_1:21091091-21091110 Msa1184900:CDS 40.0%
! TGAACCGGTTCCTATTGAAT+CGG + chr8_1:21091118-21091137 None:intergenic 40.0%
ATCAGAACCGCTATTGATAC+TGG - chr8_1:21091227-21091246 Msa1184900:intron 40.0%
! AGGAACTGGTTTAGTTGAAC+CGG - chr8_1:21091316-21091335 Msa1184900:intron 40.0%
CTCACTCTGCACAAAATGTT+TGG - chr8_1:21091394-21091413 Msa1184900:intron 40.0%
AAAAGTCTTGGATAGGCATG+TGG - chr8_1:21092777-21092796 Msa1184900:intron 40.0%
AAAGTCTTGGATAGGCATGT+GGG - chr8_1:21092778-21092797 Msa1184900:intron 40.0%
! ACCTTACTCTAAGGATAGTG+GGG + chr8_1:21092810-21092829 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + chr8_1:21093150-21093169 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr8_1:21093288-21093307 Msa1184900:intron 40.0%
TACAATATCAGGTGGCAAGT+TGG - chr8_1:21093517-21093536 Msa1184900:intron 40.0%
ACAATATCAGGTGGCAAGTT+GGG - chr8_1:21093518-21093537 Msa1184900:intron 40.0%
! GTTCAATTTGCTCTTGAACG+AGG - chr8_1:21093609-21093628 Msa1184900:intron 40.0%
GCAAGAATTCCAATCAAAGC+CGG + chr8_1:21093639-21093658 None:intergenic 40.0%
CAAAGGCTCTTGAAGGATAA+GGG + chr8_1:21093674-21093693 None:intergenic 40.0%
TCAAAGGCTCTTGAAGGATA+AGG + chr8_1:21093675-21093694 None:intergenic 40.0%
TCCTTCAAGAGCCTTTGATA+TGG - chr8_1:21093677-21093696 Msa1184900:intron 40.0%
TGAAAAAGAGACCACACCAA+AGG - chr8_1:21093990-21094009 Msa1184900:CDS 40.0%
AAAATACGACACCTTTGGTG+TGG + chr8_1:21094004-21094023 None:intergenic 40.0%
ATCGAGACAAACATAGACAC+TGG + chr8_1:21094338-21094357 None:intergenic 40.0%
ATGTGGCAAAAAGTCTATGC+TGG - chr8_1:21094591-21094610 Msa1184900:intron 40.0%
TTGGTTTCTGCCATATTGCA+AGG + chr8_1:21094640-21094659 None:intergenic 40.0%
TTGCAGTGCATATGATTGGT+TGG + chr8_1:21094659-21094678 None:intergenic 40.0%
TATATGTGTCGGAGTTGTGT+CGG + chr8_1:21094925-21094944 None:intergenic 40.0%
! AAGAAGCACAGATACAGACA+TGG + chr8_1:21095011-21095030 None:intergenic 40.0%
ATGTCCAGTCTTAAGCATGA+GGG - chr8_1:21095204-21095223 Msa1184900:intron 40.0%
ATCCCACATTTGATGCGATA+TGG - chr8_1:21095241-21095260 Msa1184900:intron 40.0%
AGCCATATCGCATCAAATGT+GGG + chr8_1:21095246-21095265 None:intergenic 40.0%
AAGCCATATCGCATCAAATG+TGG + chr8_1:21095247-21095266 None:intergenic 40.0%
AATCATTGGACCAACCCTAT+TGG + chr8_1:21095364-21095383 None:intergenic 40.0%
ATCAACGTCAAAGAAGTTGC+TGG - chr8_1:21095485-21095504 Msa1184900:intron 40.0%
CTGGTGGAGAAATATCAAAG+TGG - chr8_1:21095504-21095523 Msa1184900:intron 40.0%
CTTTCACTACTAATCCTTGG+GGG + chr8_1:21095551-21095570 None:intergenic 40.0%
!! CACTAGTTGATGATCCTGTT+TGG - chr8_1:21095726-21095745 Msa1184900:intron 40.0%
ACAATGTTCATGACCCAAAC+AGG + chr8_1:21095743-21095762 None:intergenic 40.0%
CATGAACATTGTTCCTGTTG+AGG - chr8_1:21095751-21095770 Msa1184900:intron 40.0%
!! CTTGGTGTCATATATGAACG+TGG - chr8_1:21095788-21095807 Msa1184900:intron 40.0%
ATGCCTTGCTTCTATTTGCT+AGG - chr8_1:21095837-21095856 Msa1184900:intron 40.0%
! TGCCTTGCTTCTATTTGCTA+GGG - chr8_1:21095838-21095857 Msa1184900:intron 40.0%
! GTCTTAACCCTCCGATTTTT+AGG - chr8_1:21095888-21095907 Msa1184900:intron 40.0%
CAGTTTGTCCTAAAAATCGG+AGG + chr8_1:21095899-21095918 None:intergenic 40.0%
!!! CTCCGATTTTTAGGACAAAC+TGG - chr8_1:21095897-21095916 Msa1184900:intron 40.0%
!!! TTTTTAGGACAAACTGGCAC+TGG - chr8_1:21095903-21095922 Msa1184900:intron 40.0%
!! GGCACTGGTAATCTAGAATT+CGG - chr8_1:21095918-21095937 Msa1184900:intron 40.0%
! ATCATTACCTGTGTTGGTAG+AGG + chr8_1:21096479-21096498 None:intergenic 40.0%
CTACCAACACAGGTAATGAT+AGG - chr8_1:21096479-21096498 Msa1184900:CDS 40.0%
! CGCAAAATTACACCACCTTT+TGG + chr8_1:21096788-21096807 None:intergenic 40.0%
! CAATGTAGATGTGTTGACGA+AGG - chr8_1:21096811-21096830 Msa1184900:CDS 40.0%
CATTGCAGATGAAATGCAGT+GGG - chr8_1:21096841-21096860 Msa1184900:CDS 40.0%
TAGTTGCAGTCAAGCAATAC+TGG - chr8_1:21096915-21096934 Msa1184900:CDS 40.0%
! GTTATGGTGGAAGCATATGG+AGG + chr8_1:21090739-21090758 None:intergenic 45.0%
! TTCTAGTGATGGAGTTGTGG+TGG + chr8_1:21090784-21090803 None:intergenic 45.0%
AGAGTGATGGTTCACATGGT+GGG + chr8_1:21090866-21090885 None:intergenic 45.0%
TAGAGTGATGGTTCACATGG+TGG + chr8_1:21090867-21090886 None:intergenic 45.0%
CTCCATGTGAGGATCAGAAA+AGG - chr8_1:21090895-21090914 Msa1184900:intron 45.0%
! GACCTTTTCTGATCCTCACA+TGG + chr8_1:21090900-21090919 None:intergenic 45.0%
TGTAGAATACCAGCTCCGTT+TGG - chr8_1:21090990-21091009 Msa1184900:intron 45.0%
TCCACGGTTAACTCCTTATG+TGG + chr8_1:21091074-21091093 None:intergenic 45.0%
TATTGAATCGGACCCAGTTC+TGG + chr8_1:21091106-21091125 None:intergenic 45.0%
AGAACTGGGTCCGATTCAAT+AGG - chr8_1:21091105-21091124 Msa1184900:CDS 45.0%
! GATTCAATAGGAACCGGTTC+AGG - chr8_1:21091117-21091136 Msa1184900:CDS 45.0%
! ACCGCTATTGATACTGGTTG+TGG - chr8_1:21091233-21091252 Msa1184900:intron 45.0%
CCCACAACCAGTATCAATAG+CGG + chr8_1:21091237-21091256 None:intergenic 45.0%
! CCGCTATTGATACTGGTTGT+GGG - chr8_1:21091234-21091253 Msa1184900:intron 45.0%
! CGCTATTGATACTGGTTGTG+GGG - chr8_1:21091235-21091254 Msa1184900:intron 45.0%
! ACTGGTTTAGTTGAACCGGT+TGG - chr8_1:21091320-21091339 Msa1184900:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr8_1:21093287-21093306 Msa1184900:intron 45.0%
AGGTACAAATTCTCGTGCCT+AGG + chr8_1:21093361-21093380 None:intergenic 45.0%
GGATGAACACATCACATGCT+AGG + chr8_1:21093381-21093400 None:intergenic 45.0%
CAATATCAGGTGGCAAGTTG+GGG - chr8_1:21093519-21093538 Msa1184900:intron 45.0%
TGGGCTTCATGAGTATCTCT+TGG + chr8_1:21093588-21093607 None:intergenic 45.0%
GCCATATCAAAGGCTCTTGA+AGG + chr8_1:21093681-21093700 None:intergenic 45.0%
TGAGCAGTGAGCCATATCAA+AGG + chr8_1:21093691-21093710 None:intergenic 45.0%
TTGATATGGCTCACTGCTCA+AGG - chr8_1:21093691-21093710 Msa1184900:intron 45.0%
AATGTACCATACTGTCCCCA+AGG + chr8_1:21093726-21093745 None:intergenic 45.0%
! TCACAATGCTGATTGGCAGA+TGG - chr8_1:21094425-21094444 Msa1184900:intron 45.0%
! GTTGATAGATTACTGCGTCC+TGG - chr8_1:21094464-21094483 Msa1184900:intron 45.0%
GTGGATACTGGATTCTGTCA+GGG - chr8_1:21094486-21094505 Msa1184900:intron 45.0%
! TGTTTCTGCCAGCTTATTGG+TGG + chr8_1:21094512-21094531 None:intergenic 45.0%
! CAGTGTTTCTGCCAGCTTAT+TGG + chr8_1:21094515-21094534 None:intergenic 45.0%
CAATAAGCTGGCAGAAACAC+TGG - chr8_1:21094513-21094532 Msa1184900:intron 45.0%
GCAGAAACACTGGAAAGGAT+GGG - chr8_1:21094523-21094542 Msa1184900:intron 45.0%
AACACTGGAAAGGATGGGAA+AGG - chr8_1:21094528-21094547 Msa1184900:intron 45.0%
GAAAGGATGGGAAAGGACTA+GGG - chr8_1:21094535-21094554 Msa1184900:intron 45.0%
TCCTGTGCTTCTTCACAGAA+GGG + chr8_1:21094710-21094729 None:intergenic 45.0%
ATCCTGTGCTTCTTCACAGA+AGG + chr8_1:21094711-21094730 None:intergenic 45.0%
TGCTATTACCAAGCCATGTC+TGG + chr8_1:21094734-21094753 None:intergenic 45.0%
! GCGGATGGTCCAACAAATTT+TGG + chr8_1:21095157-21095176 None:intergenic 45.0%
!! TAACTTGACTGGCCTGATAG+CGG + chr8_1:21095176-21095195 None:intergenic 45.0%
CATGCTTAAGACTGGACATC+TGG + chr8_1:21095203-21095222 None:intergenic 45.0%
GATGTCCAGTCTTAAGCATG+AGG - chr8_1:21095203-21095222 Msa1184900:intron 45.0%
ATCTCCCTCATGCTTAAGAC+TGG + chr8_1:21095211-21095230 None:intergenic 45.0%
GTTGATTACATCTGGCAGTG+GGG + chr8_1:21095471-21095490 None:intergenic 45.0%
! CGTTGATTACATCTGGCAGT+GGG + chr8_1:21095472-21095491 None:intergenic 45.0%
! ACGTTGATTACATCTGGCAG+TGG + chr8_1:21095473-21095492 None:intergenic 45.0%
AACGTCAAAGAAGTTGCTGG+TGG - chr8_1:21095488-21095507 Msa1184900:intron 45.0%
GACTAACTTCAATTCCCCCA+AGG - chr8_1:21095534-21095553 Msa1184900:intron 45.0%
CTCAGCTAGCTGAGAATCAA+GGG + chr8_1:21095648-21095667 None:intergenic 45.0%
TCTCAGCTAGCTGAGAATCA+AGG + chr8_1:21095649-21095668 None:intergenic 45.0%
TGCCCTAGCAAATAGAAGCA+AGG + chr8_1:21095843-21095862 None:intergenic 45.0%
GAGTGAATGTCGGATCAATC+AGG + chr8_1:21096005-21096024 None:intergenic 45.0%
GTCATAAGTTCGTGGGTAAG+TGG + chr8_1:21096430-21096449 None:intergenic 45.0%
! TTTTCAGCCTCTACCAACAC+AGG - chr8_1:21096469-21096488 Msa1184900:CDS 45.0%
! GGAGAACATTCTTCTGGAGA+TGG - chr8_1:21096748-21096767 Msa1184900:CDS 45.0%
! ACATTCTTCTGGAGATGGAC+CGG - chr8_1:21096753-21096772 Msa1184900:CDS 45.0%
GCATTGCAGATGAAATGCAG+TGG - chr8_1:21096840-21096859 Msa1184900:CDS 45.0%
!!! TGCTAGTTTTGCTCTGTTGG+TGG + chr8_1:21096947-21096966 None:intergenic 45.0%
!!! CTGTGCTAGTTTTGCTCTGT+TGG + chr8_1:21096950-21096969 None:intergenic 45.0%
!! TTAAATATAGTAAAAATTAA+AGG - chr8_1:21091726-21091745 Msa1184900:CDS 5.0%
!! TAAATATAGTAAAAATTAAA+GGG - chr8_1:21091727-21091746 Msa1184900:CDS 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG + chr8_1:21091830-21091849 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG + chr8_1:21091831-21091850 None:intergenic 5.0%
!! AAAATTAATTAAAAAGAAAA+AGG - chr8_1:21092915-21092934 Msa1184900:CDS 5.0%
!! AAATTAATTAAAAAGAAAAA+GGG - chr8_1:21092916-21092935 Msa1184900:CDS 5.0%
!! TAAAAAAAAAATATGATTAA+GGG - chr8_1:21093861-21093880 Msa1184900:CDS 5.0%
GATAGTGATGCCAGAGACCA+AGG + chr8_1:21090656-21090675 None:intergenic 50.0%
!! AGAGGTGGTGATGGAGTAAC+CGG + chr8_1:21090703-21090722 None:intergenic 50.0%
AAGCATATGGAGGAGGAGGA+AGG + chr8_1:21090729-21090748 None:intergenic 50.0%
! ATGGTGGAAGCATATGGAGG+AGG + chr8_1:21090736-21090755 None:intergenic 50.0%
GTGGCGGTGAATTCTAGTGA+TGG + chr8_1:21090795-21090814 None:intergenic 50.0%
GTAAGGGACAGTGTCTCTCA+CGG + chr8_1:21090953-21090972 None:intergenic 50.0%
CGGAGAGTTTCCTCTGGTAA+GGG + chr8_1:21090969-21090988 None:intergenic 50.0%
CCTTACCAGAGGAAACTCTC+CGG - chr8_1:21090967-21090986 Msa1184900:intron 50.0%
ACGGAGCTGGTATTCTACAC+CGG + chr8_1:21090989-21091008 None:intergenic 50.0%
TACCAGCTCCGTTTGGTTAC+CGG - chr8_1:21090997-21091016 Msa1184900:intron 50.0%
! GTTACCGGTTACCATTACGG+TGG - chr8_1:21091012-21091031 Msa1184900:intron 50.0%
GCCACATAAGGAGTTAACCG+TGG - chr8_1:21091070-21091089 Msa1184900:intron 50.0%
GGGTCCGATTCAATAGGAAC+CGG - chr8_1:21091111-21091130 Msa1184900:CDS 50.0%
ATTTGCGCCACGTGGAAACA+TGG + chr8_1:21091159-21091178 None:intergenic 50.0%
GCCCCACTATCCTTAGAGTA+AGG - chr8_1:21092806-21092825 Msa1184900:intron 50.0%
ACATCACGGGAACTACACCT+AGG - chr8_1:21093341-21093360 Msa1184900:intron 50.0%
! TGCTCTTGAACGAGGTGTTC+CGG - chr8_1:21093617-21093636 Msa1184900:intron 50.0%
! CTCAAGGTGCCTCATTCCTT+GGG - chr8_1:21093707-21093726 Msa1184900:intron 50.0%
! TCAAGGTGCCTCATTCCTTG+GGG - chr8_1:21093708-21093727 Msa1184900:intron 50.0%
CATACTGTCCCCAAGGAATG+AGG + chr8_1:21093719-21093738 None:intergenic 50.0%
CTCATTCCTTGGGGACAGTA+TGG - chr8_1:21093717-21093736 Msa1184900:intron 50.0%
GATAGATTACTGCGTCCTGG+TGG - chr8_1:21094467-21094486 Msa1184900:intron 50.0%
GACAGAATCCAGTATCCACC+AGG + chr8_1:21094485-21094504 None:intergenic 50.0%
GGTGGATACTGGATTCTGTC+AGG - chr8_1:21094485-21094504 Msa1184900:intron 50.0%
AGCTGGCAGAAACACTGGAA+AGG - chr8_1:21094518-21094537 Msa1184900:intron 50.0%
GGCAGAAACACTGGAAAGGA+TGG - chr8_1:21094522-21094541 Msa1184900:intron 50.0%
GGAAAGGATGGGAAAGGACT+AGG - chr8_1:21094534-21094553 Msa1184900:intron 50.0%
! ACCCTTCTGTGAAGAAGCAC+AGG - chr8_1:21094706-21094725 Msa1184900:intron 50.0%
! AGAAGCACAGGATCCAGACA+TGG - chr8_1:21094718-21094737 Msa1184900:intron 50.0%
TATGAAGCACGGACACTCCT+CGG - chr8_1:21094858-21094877 Msa1184900:intron 50.0%
CACGACATATGTCCGACACT+GGG + chr8_1:21094895-21094914 None:intergenic 50.0%
ACACGACATATGTCCGACAC+TGG + chr8_1:21094896-21094915 None:intergenic 50.0%
ACAGACATGGACACCAGACA+CGG + chr8_1:21094998-21095017 None:intergenic 50.0%
GCTTCTTATGAGTCCCGCAT+TGG - chr8_1:21095024-21095043 Msa1184900:intron 50.0%
TTGTTGGACCATCCGCTATC+AGG - chr8_1:21095161-21095180 Msa1184900:intron 50.0%
! CATCTGGAGCGTAACTTGAC+TGG + chr8_1:21095187-21095206 None:intergenic 50.0%
GATTCTCAGCTAGCTGAGAC+TGG - chr8_1:21095650-21095669 Msa1184900:intron 50.0%
AGTTCGTGGGTAAGTGGACA+TGG + chr8_1:21096424-21096443 None:intergenic 50.0%
! TGGAGATGGACCGGATTTTG+CGG - chr8_1:21096762-21096781 Msa1184900:CDS 50.0%
! CACCTTTTGGCCGCAAAATC+CGG + chr8_1:21096775-21096794 None:intergenic 50.0%
GGAAGGTTGAGAGGTGGTGA+TGG + chr8_1:21090712-21090731 None:intergenic 55.0%
! GTGGAAGCATATGGAGGAGG+AGG + chr8_1:21090733-21090752 None:intergenic 55.0%
TGGAGTTGTGGTGGCTGTGA+TGG + chr8_1:21090775-21090794 None:intergenic 55.0%
TGAGAAACACGCGCCGTCTT+TGG + chr8_1:21090840-21090859 None:intergenic 55.0%
! GTGATGGTTCACATGGTGGG+AGG + chr8_1:21090863-21090882 None:intergenic 55.0%
GAGACACTGTCCCTTACCAG+AGG - chr8_1:21090956-21090975 Msa1184900:intron 55.0%
CCGGAGAGTTTCCTCTGGTA+AGG + chr8_1:21090970-21090989 None:intergenic 55.0%
CTACACCGGAGAGTTTCCTC+TGG + chr8_1:21090975-21090994 None:intergenic 55.0%
AACCGGTAACCAAACGGAGC+TGG + chr8_1:21091002-21091021 None:intergenic 55.0%
TTGCATACCATGCCGCGTCA+CGG + chr8_1:21091046-21091065 None:intergenic 55.0%
! TAGGAACCGGTTCAGGTTCC+CGG - chr8_1:21091124-21091143 Msa1184900:CDS 55.0%
ACGTATGCATTTGCGCCACG+TGG + chr8_1:21091167-21091186 None:intergenic 55.0%
! CGAGGTGTTCCGGCTTTGAT+TGG - chr8_1:21093627-21093646 Msa1184900:intron 55.0%
! GCTCAAGGTGCCTCATTCCT+TGG - chr8_1:21093706-21093725 Msa1184900:intron 55.0%
! TACTGCGTCCTGGTGGATAC+TGG - chr8_1:21094474-21094493 Msa1184900:intron 55.0%
TGTCAGGGCCACCAATAAGC+TGG - chr8_1:21094501-21094520 Msa1184900:intron 55.0%
CACAGGATCCAGACATGGCT+TGG - chr8_1:21094723-21094742 Msa1184900:intron 55.0%
GATTAGGCGTGTCCCAGTGT+CGG - chr8_1:21094880-21094899 Msa1184900:intron 55.0%
!! TTGACTGGCCTGATAGCGGA+TGG + chr8_1:21095172-21095191 None:intergenic 55.0%
! GACCGGATTTTGCGGCCAAA+AGG - chr8_1:21096770-21096789 Msa1184900:CDS 55.0%
! CGGATTTTGCGGCCAAAAGG+TGG - chr8_1:21096773-21096792 Msa1184900:CDS 55.0%
!! GTAACCGGTGGCGGAGATGA+CGG + chr8_1:21090688-21090707 None:intergenic 60.0%
!! GGTGATGGAGTAACCGGTGG+CGG + chr8_1:21090697-21090716 None:intergenic 60.0%
!! GGTGGTGATGGAGTAACCGG+TGG + chr8_1:21090700-21090719 None:intergenic 60.0%
GGAGGAGGAAGGTTGAGAGG+TGG + chr8_1:21090718-21090737 None:intergenic 60.0%
GGAGGAGGAGGAAGGTTGAG+AGG + chr8_1:21090721-21090740 None:intergenic 60.0%
!! TCTTTGGTGGTGGGTCAGGG+AGG + chr8_1:21090824-21090843 None:intergenic 60.0%
!! CCGTCTTTGGTGGTGGGTCA+GGG + chr8_1:21090827-21090846 None:intergenic 60.0%
CCCTGACCCACCACCAAAGA+CGG - chr8_1:21090824-21090843 Msa1184900:intron 60.0%
GAAACACGCGCCGTCTTTGG+TGG + chr8_1:21090837-21090856 None:intergenic 60.0%
CCGGCCACCGTAATGGTAAC+CGG + chr8_1:21091019-21091038 None:intergenic 60.0%
CCGGTTACCATTACGGTGGC+CGG - chr8_1:21091016-21091035 Msa1184900:intron 60.0%
! AGGAACCGGTTCAGGTTCCC+GGG - chr8_1:21091125-21091144 Msa1184900:CDS 60.0%
GAAACATGGTCCCACCACCC+GGG + chr8_1:21091145-21091164 None:intergenic 60.0%
GGAAACATGGTCCCACCACC+CGG + chr8_1:21091146-21091165 None:intergenic 60.0%
GGTGGGACCATGTTTCCACG+TGG - chr8_1:21091149-21091168 Msa1184900:intron 60.0%
GCACGGACACTCCTCGGATT+AGG - chr8_1:21094864-21094883 Msa1184900:intron 60.0%
ACTGGGACACGCCTAATCCG+AGG + chr8_1:21094878-21094897 None:intergenic 60.0%
ATCTGGCAGTGGGGTCAAGC+AGG + chr8_1:21095462-21095481 None:intergenic 60.0%
!! GCGGAGATGACGGTGGTGGA+AGG + chr8_1:21090678-21090697 None:intergenic 65.0%
ACCACCGTCATCTCCGCCAC+CGG - chr8_1:21090681-21090700 Msa1184900:CDS 65.0%
GTCAGGGAGGTGGTGAGTGG+CGG + chr8_1:21090811-21090830 None:intergenic 65.0%
TGGGTCAGGGAGGTGGTGAG+TGG + chr8_1:21090814-21090833 None:intergenic 65.0%
!! TTGGTGGTGGGTCAGGGAGG+TGG + chr8_1:21090821-21090840 None:intergenic 65.0%
!! GCCGTCTTTGGTGGTGGGTC+AGG + chr8_1:21090828-21090847 None:intergenic 65.0%
! CACGCGCCGTCTTTGGTGGT+GGG + chr8_1:21090833-21090852 None:intergenic 65.0%
ACACGCGCCGTCTTTGGTGG+TGG + chr8_1:21090834-21090853 None:intergenic 65.0%
! AACCGGTTCAGGTTCCCGGG+TGG - chr8_1:21091128-21091147 Msa1184900:CDS 65.0%
CACCACCCGGGAACCTGAAC+CGG + chr8_1:21091133-21091152 None:intergenic 65.0%
! GGTTCAGGTTCCCGGGTGGT+GGG - chr8_1:21091132-21091151 Msa1184900:CDS 65.0%
!! GGTGGCGGAGATGACGGTGG+TGG + chr8_1:21090682-21090701 None:intergenic 70.0%
!! ACCGGTGGCGGAGATGACGG+TGG + chr8_1:21090685-21090704 None:intergenic 70.0%
CGGCTCTCCGGCCACCGTAA+TGG + chr8_1:21091026-21091045 None:intergenic 70.0%
CATGCCGCGTCACGGCTCTC+CGG + chr8_1:21091038-21091057 None:intergenic 70.0%
! CGGTTCAGGTTCCCGGGTGG+TGG - chr8_1:21091131-21091150 Msa1184900:CDS 70.0%
!! GGTGTCGGCGTGTCCGTGTC+TGG - chr8_1:21094982-21095001 Msa1184900:intron 70.0%
GTGGCCGGAGAGCCGTGACG+CGG - chr8_1:21091031-21091050 Msa1184900:intron 75.0%
CGGAGAGCCGTGACGCGGCA+TGG - chr8_1:21091036-21091055 Msa1184900:intron 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 21090332 21097241 21090332 ID=Msa1184900;Name=Msa1184900
chr8_1 mRNA 21090332 21097241 21090332 ID=Msa1184900-mRNA-1;Parent=Msa1184900;Name=Msa1184900-mRNA-1;_AED=0.12;_eAED=0.12;_QI=158|0.85|0.87|1|0.71|0.5|8|257|672
chr8_1 exon 21090332 21090450 21090332 ID=Msa1184900-mRNA-1:exon:8080;Parent=Msa1184900-mRNA-1
chr8_1 exon 21090471 21090834 21090471 ID=Msa1184900-mRNA-1:exon:8079;Parent=Msa1184900-mRNA-1
chr8_1 exon 21091083 21091160 21091083 ID=Msa1184900-mRNA-1:exon:8078;Parent=Msa1184900-mRNA-1
chr8_1 exon 21091649 21092131 21091649 ID=Msa1184900-mRNA-1:exon:8077;Parent=Msa1184900-mRNA-1
chr8_1 exon 21092829 21093129 21092829 ID=Msa1184900-mRNA-1:exon:8076;Parent=Msa1184900-mRNA-1
chr8_1 exon 21093835 21094045 21093835 ID=Msa1184900-mRNA-1:exon:8075;Parent=Msa1184900-mRNA-1
chr8_1 exon 21096317 21097153 21096317 ID=Msa1184900-mRNA-1:exon:8074;Parent=Msa1184900-mRNA-1
chr8_1 exon 21097201 21097241 21097201 ID=Msa1184900-mRNA-1:exon:8073;Parent=Msa1184900-mRNA-1
chr8_1 five_prime_UTR 21097201 21097241 21097201 ID=Msa1184900-mRNA-1:five_prime_utr;Parent=Msa1184900-mRNA-1
chr8_1 five_prime_UTR 21097037 21097153 21097037 ID=Msa1184900-mRNA-1:five_prime_utr;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21096317 21097036 21096317 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21093835 21094045 21093835 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21092829 21093129 21092829 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21091649 21092131 21091649 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21091083 21091160 21091083 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 CDS 21090609 21090834 21090609 ID=Msa1184900-mRNA-1:cds;Parent=Msa1184900-mRNA-1
chr8_1 three_prime_UTR 21090471 21090608 21090471 ID=Msa1184900-mRNA-1:three_prime_utr;Parent=Msa1184900-mRNA-1
chr8_1 three_prime_UTR 21090332 21090450 21090332 ID=Msa1184900-mRNA-1:three_prime_utr;Parent=Msa1184900-mRNA-1
Gene Sequence

>Msa1184900

ATGAATATTAACTTTAAAACCCTACTTCACACTTTCAAATCCAAAAAACCAAATATATTATTAACAAATCTATACTTTATCACCTTTGCATTTTTCTTATGTACCTTCTTTTACTTCCTTGGTCTCTGGCATCACTATCCTTCCACCACCGTCATCTCCGCCACCGGTTACTCCATCACCACCTCTCAACCTTCCTCCTCCTCCATATGCTTCCACCATAACAACAACAACAGTACCATCACAGCCACCACAACTCCATCACTAGAATTCACCGCCACTCACCACCTCCCTGACCCACCACCAAAGACGGCGCGTGTTTCTCACCTCCCACCATGTGAACCATCACTCTATGAATACACTCCATGTGAGGATCAGAAAAGGTCACTGCGCTTCCCTAGAAAGAAACTTATCTACCGTGAGAGACACTGTCCCTTACCAGAGGAAACTCTCCGGTGTAGAATACCAGCTCCGTTTGGTTACCGGTTACCATTACGGTGGCCGGAGAGCCGTGACGCGGCATGGTATGCAAATGTGCCACATAAGGAGTTAACCGTGGAGAAGAAAAACCAGAACTGGGTCCGATTCAATAGGAACCGGTTCAGGTTCCCGGGTGGTGGGACCATGTTTCCACGTGGCGCAAATGCATACGTTGATGATATTGGGAAGTTGATAAATCTTAAAGATGGGTCTATCAGAACCGCTATTGATACTGGTTGTGGGGTGGCAAGTTGGGGAGCTTATCTTTTGTCACGTAACATATTAACAGTGTCAGTTGCACCAAGAGATACTCATGAAGCCCAAGTTCAATTTGCTCTTGAACGAGGTGTTCCGGCTTTGATTGGAATTCTTGCTTCAATAAGGCTCCCTTATCCTTCAAGAGCCTTTGATATGGCTCACTGCTCAAGGTGCCTCATTCCTTGGGGACAGTATGATGGAATATACTTGACTGAAGTTGATAGATTACTGCGTCCTGGTGGATACTGGATTCTGTCAGGGCCACCAATAAGCTGGCAGAAACACTGGAAAGGATGGGAAAGGACTAGGGAGAGTCTCAATGATGAACAAGATGCAATTGAGAATGTGGCAAAAAGTCTATGCTGGAAAAAATTAGTACAAAAAGGTGACCTTGCAATATGGCAGAAACCAACCAATCATATGCACTGCAAAGTTAAAAGAAAGATCTTTAAGACTAGACCCTTCTGTGAAGAAGCACAGGATCCAGACATGGCTTGGTACACAAAACTAGATACCTGCTTGACCCCACTGCCAGATGTAATCAACGTCAAAGAAGTTGCTGGTGGAGAAATATCAAAGTGGCCAAAGAGACTAACTTCAATTCCCCCAAGGATTAGTAGTGAAAGTTTGCAAGGAATAACATCAGAAATGTTCAAAGAAAATACTGAGTTATGGAAAAAGAGAGTGTCATATTACAAGACCCTTGATTCTCAGCTAGCTGAGACTGGAAGATATAGAAATCTTCTTGATATGAATTCTTACTTAGGAGGCTTTGCAGCTGCACTAGTTGATGATCCTGTTTGGGTCATGAACATTGTTCCTGTTGAGGCTGAAATTAATACTCTTGGTGTCATATATGAACGTGGACTCATTGGAACCTATCAAAATTGGTATGCCTTGCTTCTATTTGCTAGGGCAAAGTTGAGTGATTTGTTTACTTTTAGTCTTAACCCTCCGATTTTTAGGACAAACTGGCACTGGTGTGAAGCCATGTCCACTTACCCACGAACTTATGACTTCATACATGGTGATTCAGTTTTCAGCCTCTACCAACACAGATGTAGTATGGAGAACATTCTTCTGGAGATGGACCGGATTTTGCGGCCAAAAGGTGGTGTAATTTTGCGCGACAATGTAGATGTGTTGACGAAGGTGAAGAGCATTGCAGATGAAATGCAGTGGGATGCAAGAATTAGAGACCATGAAGAAGGACCTTATCAAAGTGAAAAGATACTAGTTGCAGTCAAGCAATACTGGACAGCTCCACCAACAGAGCAAAACTAG
Protein sequence

>Msa1184900

MNINFKTLLHTFKSKKPNILLTNLYFITFAFFLCTFFYFLGLWHHYPSTTVISATGYSITTSQPSSSSICFHHNNNNSTITATTTPSLEFTATHHLPDPPPKTARVSHLPPCEPSLYEYTPCEDQKRSLRFPRKKLIYRERHCPLPEETLRCRIPAPFGYRLPLRWPESRDAAWYANVPHKELTVEKKNQNWVRFNRNRFRFPGGGTMFPRGANAYVDDIGKLINLKDGSIRTAIDTGCGVASWGAYLLSRNILTVSVAPRDTHEAQVQFALERGVPALIGILASIRLPYPSRAFDMAHCSRCLIPWGQYDGIYLTEVDRLLRPGGYWILSGPPISWQKHWKGWERTRESLNDEQDAIENVAKSLCWKKLVQKGDLAIWQKPTNHMHCKVKRKIFKTRPFCEEAQDPDMAWYTKLDTCLTPLPDVINVKEVAGGEISKWPKRLTSIPPRISSESLQGITSEMFKENTELWKKRVSYYKTLDSQLAETGRYRNLLDMNSYLGGFAAALVDDPVWVMNIVPVEAEINTLGVIYERGLIGTYQNWYALLLFARAKLSDLFTFSLNPPIFRTNWHWCEAMSTYPRTYDFIHGDSVFSLYQHRCSMENILLEMDRILRPKGGVILRDNVDVLTKVKSIADEMQWDARIRDHEEGPYQSEKILVAVKQYWTAPPTEQN*