Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575890 | XP_003631130.1 | 65.990 | 197 | 32 | 3 | 1 | 166 | 4 | 196 | 6.11e-72 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575890 | G7LE74 | 65.990 | 197 | 32 | 3 | 1 | 166 | 4 | 196 | 2.92e-72 | 225 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0575890 | 0.813638 | 2.312837e-51 | -8.615850e-47 |
| Msa0005690 | Msa0575890 | 0.813831 | 2.097025e-51 | -8.615850e-47 |
| Msa0006700 | Msa0575890 | 0.833559 | 4.973954e-56 | -8.615850e-47 |
| Msa0012780 | Msa0575890 | -0.810838 | 9.443929e-51 | -8.615850e-47 |
| Msa0014410 | Msa0575890 | 0.802326 | 5.916366e-49 | -8.615850e-47 |
| Msa0017420 | Msa0575890 | 0.813487 | 2.497156e-51 | -8.615850e-47 |
| Msa0020630 | Msa0575890 | 0.828609 | 8.176426e-55 | -8.615850e-47 |
| Msa0046360 | Msa0575890 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
| Msa0051100 | Msa0575890 | 0.803959 | 2.717057e-49 | -8.615850e-47 |
| Msa0053960 | Msa0575890 | 0.803562 | 3.285015e-49 | -8.615850e-47 |
| Msa0064550 | Msa0575890 | 0.802297 | 5.998668e-49 | -8.615850e-47 |
| Msa0083160 | Msa0575890 | 0.825039 | 5.825686e-54 | -8.615850e-47 |
| Msa0084630 | Msa0575890 | 0.848782 | 4.921086e-60 | -8.615850e-47 |
| Msa0093440 | Msa0575890 | 0.825372 | 4.858073e-54 | -8.615850e-47 |
| Msa0096510 | Msa0575890 | 0.809502 | 1.832830e-50 | -8.615850e-47 |
| Msa0101060 | Msa0575890 | 0.800854 | 1.185219e-48 | -8.615850e-47 |
| Msa0104360 | Msa0575890 | 0.811629 | 6.363380e-51 | -8.615850e-47 |
| Msa0105600 | Msa0575890 | 0.804054 | 2.597187e-49 | -8.615850e-47 |
| Msa0109490 | Msa0575890 | 0.834552 | 2.805203e-56 | -8.615850e-47 |
| Msa0130800 | Msa0575890 | 0.818395 | 2.004716e-52 | -8.615850e-47 |
| Msa0153440 | Msa0575890 | 0.801563 | 8.486222e-49 | -8.615850e-47 |
| Msa0154200 | Msa0575890 | 0.801439 | 9.001467e-49 | -8.615850e-47 |
| Msa0158020 | Msa0575890 | 0.823396 | 1.416439e-53 | -8.615850e-47 |
| Msa0159750 | Msa0575890 | 0.831635 | 1.493060e-55 | -8.615850e-47 |
| Msa0172370 | Msa0575890 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0175530 | Msa0575890 | 0.857768 | 1.303032e-62 | -8.615850e-47 |
| Msa0181020 | Msa0575890 | 0.801491 | 8.779597e-49 | -8.615850e-47 |
| Msa0181410 | Msa0575890 | 0.821103 | 4.823763e-53 | -8.615850e-47 |
| Msa0185640 | Msa0575890 | -0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa0197730 | Msa0575890 | 0.807301 | 5.403483e-50 | -8.615850e-47 |
| Msa0198440 | Msa0575890 | 0.806961 | 6.380078e-50 | -8.615850e-47 |
| Msa0200950 | Msa0575890 | -0.800207 | 1.605796e-48 | -8.615850e-47 |
| Msa0213080 | Msa0575890 | 0.801452 | 8.943535e-49 | -8.615850e-47 |
| Msa0224370 | Msa0575890 | 0.808680 | 2.750113e-50 | -8.615850e-47 |
| Msa0232860 | Msa0575890 | 0.803004 | 4.288012e-49 | -8.615850e-47 |
| Msa0235550 | Msa0575890 | 0.808270 | 3.362853e-50 | -8.615850e-47 |
| Msa0377280 | Msa0575890 | 0.819747 | 9.875690e-53 | -8.615850e-47 |
| Msa0389060 | Msa0575890 | 0.811295 | 7.519260e-51 | -8.615850e-47 |
| Msa0401340 | Msa0575890 | 0.803725 | 3.039040e-49 | -8.615850e-47 |
| Msa0404690 | Msa0575890 | 0.820187 | 7.829399e-53 | -8.615850e-47 |
| Msa0405250 | Msa0575890 | -0.800452 | 1.432014e-48 | -8.615850e-47 |
| Msa0408410 | Msa0575890 | 0.803790 | 2.946093e-49 | -8.615850e-47 |
| Msa0411000 | Msa0575890 | 0.814794 | 1.284914e-51 | -8.615850e-47 |
| Msa0413740 | Msa0575890 | 0.816574 | 5.155212e-52 | -8.615850e-47 |
| Msa0416000 | Msa0575890 | 0.824624 | 7.297331e-54 | -8.615850e-47 |
| Msa0423600 | Msa0575890 | 0.809030 | 2.314407e-50 | -8.615850e-47 |
| Msa0448120 | Msa0575890 | 0.821407 | 4.104540e-53 | -8.615850e-47 |
| Msa0454940 | Msa0575890 | 0.816718 | 4.787409e-52 | -8.615850e-47 |
| Msa0455230 | Msa0575890 | 0.815150 | 1.071491e-51 | -8.615850e-47 |
| Msa0457380 | Msa0575890 | 0.808285 | 3.338803e-50 | -8.615850e-47 |
| Msa0462190 | Msa0575890 | 0.800306 | 1.532898e-48 | -8.615850e-47 |
| Msa0462590 | Msa0575890 | 0.825798 | 3.850832e-54 | -8.615850e-47 |
| Msa0475740 | Msa0575890 | 0.805516 | 1.285459e-49 | -8.615850e-47 |
| Msa0250170 | Msa0575890 | 0.800800 | 1.215764e-48 | -8.615850e-47 |
| Msa0258670 | Msa0575890 | -0.811167 | 8.015742e-51 | -8.615850e-47 |
| Msa0260190 | Msa0575890 | 0.816609 | 5.063625e-52 | -8.615850e-47 |
| Msa0264940 | Msa0575890 | -0.816506 | 5.339657e-52 | -8.615850e-47 |
| Msa0265980 | Msa0575890 | -0.806778 | 6.973221e-50 | -8.615850e-47 |
| Msa0267120 | Msa0575890 | 0.811784 | 5.888032e-51 | -8.615850e-47 |
| Msa0278670 | Msa0575890 | 0.806001 | 1.016846e-49 | -8.615850e-47 |
| Msa0288220 | Msa0575890 | 0.807675 | 4.502572e-50 | -8.615850e-47 |
| Msa0288330 | Msa0575890 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa0296610 | Msa0575890 | 0.811763 | 5.950971e-51 | -8.615850e-47 |
| Msa0302990 | Msa0575890 | -0.823573 | 1.288144e-53 | -8.615850e-47 |
| Msa0312780 | Msa0575890 | 0.836637 | 8.325428e-57 | -8.615850e-47 |
| Msa0326670 | Msa0575890 | 0.809177 | 2.152280e-50 | -8.615850e-47 |
| Msa0327860 | Msa0575890 | 0.833013 | 6.806726e-56 | -8.615850e-47 |
| Msa0334980 | Msa0575890 | 0.806585 | 7.659016e-50 | -8.615850e-47 |
| Msa0347130 | Msa0575890 | 0.811304 | 7.485304e-51 | -8.615850e-47 |
| Msa0350020 | Msa0575890 | 0.843482 | 1.364143e-58 | -8.615850e-47 |
| Msa0350910 | Msa0575890 | 0.816666 | 4.915627e-52 | -8.615850e-47 |
| Msa0352200 | Msa0575890 | 0.815068 | 1.117263e-51 | -8.615850e-47 |
| Msa0354390 | Msa0575890 | 0.821126 | 4.766222e-53 | -8.615850e-47 |
| Msa0363460 | Msa0575890 | 0.810379 | 1.187090e-50 | -8.615850e-47 |
| Msa0504730 | Msa0575890 | 0.809509 | 1.827279e-50 | -8.615850e-47 |
| Msa0505390 | Msa0575890 | 0.815199 | 1.044977e-51 | -8.615850e-47 |
| Msa0507190 | Msa0575890 | 0.819973 | 8.764571e-53 | -8.615850e-47 |
| Msa0510960 | Msa0575890 | 0.809613 | 1.735750e-50 | -8.615850e-47 |
| Msa0528740 | Msa0575890 | 0.826422 | 2.737226e-54 | -8.615850e-47 |
| Msa0530340 | Msa0575890 | 0.810521 | 1.106011e-50 | -8.615850e-47 |
| Msa0542010 | Msa0575890 | 0.810747 | 9.884408e-51 | -8.615850e-47 |
| Msa0549740 | Msa0575890 | 0.835729 | 1.416297e-56 | -8.615850e-47 |
| Msa0553520 | Msa0575890 | 0.812270 | 4.613129e-51 | -8.615850e-47 |
| Msa0563140 | Msa0575890 | 0.840167 | 1.023453e-57 | -8.615850e-47 |
| Msa0569030 | Msa0575890 | 0.863237 | 2.873385e-64 | -8.615850e-47 |
| Msa0569930 | Msa0575890 | 0.818278 | 2.130721e-52 | -8.615850e-47 |
| Msa0570490 | Msa0575890 | 0.811117 | 8.216862e-51 | -8.615850e-47 |
| Msa0571250 | Msa0575890 | 0.818994 | 1.465505e-52 | -8.615850e-47 |
| Msa0573300 | Msa0575890 | 0.803424 | 3.509413e-49 | -8.615850e-47 |
| Msa0574170 | Msa0575890 | 0.837644 | 4.603483e-57 | -8.615850e-47 |
| Msa0574430 | Msa0575890 | 0.801932 | 7.131539e-49 | -8.615850e-47 |
| Msa0574640 | Msa0575890 | 0.830760 | 2.448626e-55 | -8.615850e-47 |
| Msa0574720 | Msa0575890 | 0.805878 | 1.079295e-49 | -8.615850e-47 |
| Msa0575770 | Msa0575890 | 0.805127 | 1.550904e-49 | -8.615850e-47 |
| Msa0575890 | Msa0589610 | 0.811889 | 5.585948e-51 | -8.615850e-47 |
| Msa0575890 | Msa0598250 | 0.803587 | 3.245946e-49 | -8.615850e-47 |
| Msa0575890 | Msa0600820 | 0.841705 | 4.040933e-58 | -8.615850e-47 |
| Msa0575890 | Msa0604700 | 0.836632 | 8.353863e-57 | -8.615850e-47 |
| Msa0575890 | Msa0619330 | 0.802243 | 6.152746e-49 | -8.615850e-47 |
| Msa0575890 | Msa0620640 | 0.807710 | 4.424663e-50 | -8.615850e-47 |
| Msa0575890 | Msa0627050 | 0.804059 | 2.590954e-49 | -8.615850e-47 |
| Msa0575890 | Msa0633720 | 0.813553 | 2.414571e-51 | -8.615850e-47 |
| Msa0575890 | Msa0639030 | 0.801415 | 9.101591e-49 | -8.615850e-47 |
| Msa0575890 | Msa0646340 | 0.809722 | 1.644267e-50 | -8.615850e-47 |
| Msa0575890 | Msa0646390 | 0.810808 | 9.587242e-51 | -8.615850e-47 |
| Msa0575890 | Msa0646570 | 0.800081 | 1.703552e-48 | -8.615850e-47 |
| Msa0575890 | Msa0647000 | 0.804813 | 1.803820e-49 | -8.615850e-47 |
| Msa0575890 | Msa0649310 | 0.851689 | 7.534478e-61 | -8.615850e-47 |
| Msa0575890 | Msa0650360 | 0.845011 | 5.297313e-59 | -8.615850e-47 |
| Msa0575890 | Msa0657670 | 0.801627 | 8.236621e-49 | -8.615850e-47 |
| Msa0575890 | Msa0657860 | 0.805217 | 1.485243e-49 | -8.615850e-47 |
| Msa0575890 | Msa0668160 | 0.840412 | 8.834040e-58 | -8.615850e-47 |
| Msa0575890 | Msa0685880 | 0.823835 | 1.118453e-53 | -8.615850e-47 |
| Msa0575890 | Msa0690350 | 0.801448 | 8.962169e-49 | -8.615850e-47 |
| Msa0575890 | Msa0697540 | 0.814909 | 1.211719e-51 | -8.615850e-47 |
| Msa0575890 | Msa0722930 | 0.804705 | 1.900317e-49 | -8.615850e-47 |
| Msa0575890 | Msa0752580 | 0.831734 | 1.411307e-55 | -8.615850e-47 |
| Msa0575890 | Msa0754500 | 0.821551 | 3.801887e-53 | -8.615850e-47 |
| Msa0575890 | Msa0756480 | 0.817080 | 3.969585e-52 | -8.615850e-47 |
| Msa0575890 | Msa0760890 | 0.846698 | 1.844660e-59 | -8.615850e-47 |
| Msa0575890 | Msa0775580 | 0.831982 | 1.225597e-55 | -8.615850e-47 |
| Msa0575890 | Msa0792510 | 0.817045 | 4.041276e-52 | -8.615850e-47 |
| Msa0575890 | Msa0804340 | 0.839111 | 1.926725e-57 | -8.615850e-47 |
| Msa0575890 | Msa0808420 | 0.803193 | 3.917206e-49 | -8.615850e-47 |
| Msa0575890 | Msa0814780 | 0.812788 | 3.554338e-51 | -8.615850e-47 |
| Msa0575890 | Msa0828570 | 0.810888 | 9.215548e-51 | -8.615850e-47 |
| Msa0575890 | Msa0830900 | 0.814720 | 1.334679e-51 | -8.615850e-47 |
| Msa0575890 | Msa0835510 | 0.803943 | 2.738175e-49 | -8.615850e-47 |
| Msa0575890 | Msa0842270 | 0.842108 | 3.162885e-58 | -8.615850e-47 |
| Msa0575890 | Msa0843280 | 0.811222 | 7.797887e-51 | -8.615850e-47 |
| Msa0575890 | Msa0853500 | 0.802319 | 5.935228e-49 | -8.615850e-47 |
| Msa0575890 | Msa0863250 | 0.804407 | 2.192309e-49 | -8.615850e-47 |
| Msa0575890 | Msa0868040 | 0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0575890 | Msa0890250 | 0.809564 | 1.778320e-50 | -8.615850e-47 |
| Msa0575890 | Msa0899700 | 0.873028 | 2.018783e-67 | -8.615850e-47 |
| Msa0575890 | Msa0903730 | 0.812214 | 4.745111e-51 | -8.615850e-47 |
| Msa0575890 | Msa0909710 | 0.850408 | 1.731378e-60 | -8.615850e-47 |
| Msa0575890 | Msa0934830 | 0.804224 | 2.394000e-49 | -8.615850e-47 |
| Msa0575890 | Msa0937940 | 0.805010 | 1.640656e-49 | -8.615850e-47 |
| Msa0575890 | Msa0938420 | 0.832854 | 7.453757e-56 | -8.615850e-47 |
| Msa0575890 | Msa0964680 | 0.858640 | 7.173193e-63 | -8.615850e-47 |
| Msa0575890 | Msa0968780 | 0.810772 | 9.763281e-51 | -8.615850e-47 |
| Msa0575890 | Msa0970050 | 0.827332 | 1.658507e-54 | -8.615850e-47 |
| Msa0575890 | Msa0973130 | 0.813758 | 2.176387e-51 | -8.615850e-47 |
| Msa0575890 | Msa0975080 | 0.810943 | 8.962321e-51 | -8.615850e-47 |
| Msa0575890 | Msa0981740 | 0.803467 | 3.437656e-49 | -8.615850e-47 |
| Msa0575890 | Msa1009170 | 0.800577 | 1.350252e-48 | -8.615850e-47 |
| Msa0575890 | Msa1009220 | 0.816404 | 5.628486e-52 | -8.615850e-47 |
| Msa0575890 | Msa1014350 | 0.802291 | 6.015991e-49 | -8.615850e-47 |
| Msa0575890 | Msa1016110 | 0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa0575890 | Msa1016670 | 0.855697 | 5.302921e-62 | -8.615850e-47 |
| Msa0575890 | Msa1028780 | 0.823128 | 1.636230e-53 | -8.615850e-47 |
| Msa0575890 | Msa1029430 | 0.807394 | 5.163779e-50 | -8.615850e-47 |
| Msa0575890 | Msa1032350 | 0.816585 | 5.125217e-52 | -8.615850e-47 |
| Msa0575890 | Msa1036390 | 0.818552 | 1.846976e-52 | -8.615850e-47 |
| Msa0575890 | Msa1046610 | 0.805646 | 1.207087e-49 | -8.615850e-47 |
| Msa0575890 | Msa1051680 | 0.806002 | 1.016467e-49 | -8.615850e-47 |
| Msa0575890 | Msa1055360 | 0.833530 | 5.059553e-56 | -8.615850e-47 |
| Msa0575890 | Msa1061520 | 0.844898 | 5.682907e-59 | -8.615850e-47 |
| Msa0575890 | Msa1063920 | 0.812479 | 4.152523e-51 | -8.615850e-47 |
| Msa0575890 | Msa1069300 | 0.805403 | 1.357897e-49 | -8.615850e-47 |
| Msa0575890 | Msa1076680 | 0.830303 | 3.168671e-55 | -8.615850e-47 |
| Msa0575890 | Msa1080460 | 0.812771 | 3.584779e-51 | -8.615850e-47 |
| Msa0575890 | Msa1080840 | 0.809927 | 1.485785e-50 | -8.615850e-47 |
| Msa0575890 | Msa1081700 | 0.823644 | 1.239410e-53 | -8.615850e-47 |
| Msa0575890 | Msa1093390 | 0.836249 | 1.045406e-56 | -8.615850e-47 |
| Msa0575890 | Msa1097210 | 0.806375 | 8.481425e-50 | -8.615850e-47 |
| Msa0575890 | Msa1102540 | 0.816394 | 5.656138e-52 | -8.615850e-47 |
| Msa0575890 | Msa1108140 | 0.820435 | 6.870116e-53 | -8.615850e-47 |
| Msa0575890 | Msa1118980 | 0.815383 | 9.511098e-52 | -8.615850e-47 |
| Msa0575890 | Msa1126170 | 0.820017 | 8.564619e-53 | -8.615850e-47 |
| Msa0575890 | Msa1128650 | -0.805450 | 1.326896e-49 | -8.615850e-47 |
| Msa0575890 | Msa1130650 | 0.851564 | 8.174446e-61 | -8.615850e-47 |
| Msa0575890 | Msa1140010 | 0.807314 | 5.369345e-50 | -8.615850e-47 |
| Msa0575890 | Msa1161760 | 0.818012 | 2.447020e-52 | -8.615850e-47 |
| Msa0575890 | Msa1165290 | 0.825582 | 4.334385e-54 | -8.615850e-47 |
| Msa0575890 | Msa1173380 | 0.821946 | 3.080144e-53 | -8.615850e-47 |
| Msa0575890 | Msa1177620 | 0.846737 | 1.800218e-59 | -8.615850e-47 |
| Msa0575890 | Msa1182830 | 0.830494 | 2.845437e-55 | -8.615850e-47 |
| Msa0575890 | Msa1184900 | 0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa0575890 | Msa1186570 | 0.821428 | 4.059243e-53 | -8.615850e-47 |
| Msa0575890 | Msa1188820 | 0.802581 | 5.240950e-49 | -8.615850e-47 |
| Msa0575890 | Msa1191390 | 0.802226 | 6.201974e-49 | -8.615850e-47 |
| Msa0575890 | Msa1194300 | 0.804773 | 1.838614e-49 | -8.615850e-47 |
| Msa0575890 | Msa1212740 | 0.800944 | 1.136134e-48 | -8.615850e-47 |
| Msa0575890 | Msa1233770 | 0.831882 | 1.297700e-55 | -8.615850e-47 |
| Msa0575890 | Msa1237260 | 0.832963 | 7.001534e-56 | -8.615850e-47 |
| Msa0575890 | Msa1246560 | 0.805000 | 1.649077e-49 | -8.615850e-47 |
| Msa0575890 | Msa1256540 | -0.800562 | 1.359441e-48 | -8.615850e-47 |
| Msa0575890 | Msa1262310 | 0.843764 | 1.146162e-58 | -8.615850e-47 |
| Msa0575890 | Msa1264560 | 0.801227 | 9.943526e-49 | -8.615850e-47 |
| Msa0575890 | Msa1276080 | 0.823462 | 1.367052e-53 | -8.615850e-47 |
| Msa0575890 | Msa1279850 | 0.812499 | 4.111774e-51 | -8.615850e-47 |
| Msa0575890 | Msa1279860 | 0.810222 | 1.283145e-50 | -8.615850e-47 |
| Msa0575890 | Msa1279870 | 0.803153 | 3.993831e-49 | -8.615850e-47 |
| Msa0575890 | Msa1296960 | -0.803420 | 3.515746e-49 | -8.615850e-47 |
| Msa0575890 | Msa1306200 | 0.805187 | 1.506932e-49 | -8.615850e-47 |
| Msa0575890 | Msa1317710 | 0.877759 | 4.856838e-69 | -8.615850e-47 |
| Msa0575890 | Msa1321440 | 0.806746 | 7.081727e-50 | -8.615850e-47 |
| Msa0575890 | Msa1326000 | 0.827602 | 1.428599e-54 | -8.615850e-47 |
| Msa0575890 | Msa1328600 | 0.810172 | 1.315188e-50 | -8.615850e-47 |
| Msa0575890 | Msa1329990 | 0.813585 | 2.376161e-51 | -8.615850e-47 |
| Msa0575890 | Msa1335720 | 0.836691 | 8.065651e-57 | -8.615850e-47 |
| Msa0575890 | Msa1359620 | 0.802550 | 5.319292e-49 | -8.615850e-47 |
| Msa0575890 | Msa1373950 | 0.812029 | 5.207679e-51 | -8.615850e-47 |
| Msa0575890 | Msa1385620 | 0.821364 | 4.199437e-53 | -8.615850e-47 |
| Msa0575890 | Msa1403700 | 0.802679 | 5.004453e-49 | -8.615850e-47 |
| Msa0575890 | Msa1408190 | 0.806980 | 6.319633e-50 | -8.615850e-47 |
| Msa0575890 | Msa1418200 | 0.838710 | 2.446081e-57 | -8.615850e-47 |
| Msa0575890 | Msa1420520 | 0.817591 | 3.045598e-52 | -8.615850e-47 |
| Msa0575890 | Msa1428440 | 0.813082 | 3.064957e-51 | -8.615850e-47 |
| Msa0575890 | Msa1431240 | 0.819233 | 1.293108e-52 | -8.615850e-47 |
| Msa0575890 | Msa1440180 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa0575890 | Msa1447160 | -0.805010 | 1.641125e-49 | -8.615850e-47 |
| Msa0575890 | Msa1447440 | 0.807056 | 6.090721e-50 | -8.615850e-47 |
| Msa0575890 | Msa1448990 | 0.807268 | 5.490697e-50 | -8.615850e-47 |
| Msa0575890 | Msa1449740 | 0.807365 | 5.238539e-50 | -8.615850e-47 |
| Msa0575890 | Msa1450420 | 0.807020 | 6.198615e-50 | -8.615850e-47 |
| Msa0575890 | Msa1460310 | -0.823546 | 1.306629e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575890 | MtrunA17_Chr8g0393171 | 89.796 | 147 | 11 | 2 | 24 | 166 | 12 | 158 | 1.26e-74 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0575890 | AT3G17930.1 | 78.095 | 105 | 23 | 0 | 62 | 166 | 84 | 188 | 5.76e-58 | 179 |
Find 62 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAGGCAGCATTGGAATT+TGG | 0.231071 | 4_1:+79869496 | Msa0575890:three_prime_UTR |
| TGTTCAACTTGTGCTGGTTT+TGG | 0.236008 | 4_1:+79868291 | Msa0575890:CDS |
| TTCAAACTCCTCCAATGATT+TGG | 0.257000 | 4_1:+79867873 | Msa0575890:CDS |
| CTTGTAGCTCTGCTTCTGTT+AGG | 0.288048 | 4_1:-79869155 | None:intergenic |
| TTTCATAAGCACTGTAGTTT+TGG | 0.288386 | 4_1:-79869368 | None:intergenic |
| AACCGAAAACATAATATATA+TGG | 0.289332 | 4_1:+79869285 | Msa0575890:three_prime_UTR |
| AAATAATAGCTTCAAATAAA+TGG | 0.307664 | 4_1:-79869537 | None:intergenic |
| CTTAGTCTGATTATTATTAG+AGG | 0.327985 | 4_1:-79867908 | None:intergenic |
| TGGATTGGATTGGATTGGAT+TGG | 0.370789 | 4_1:+79867531 | Msa0575890:five_prime_UTR |
| AGGAAAGATGTCATATTAAT+CGG | 0.384907 | 4_1:+79868061 | Msa0575890:CDS |
| AGATGTAAATTACTATCATT+TGG | 0.390035 | 4_1:+79869680 | Msa0575890:three_prime_UTR |
| TTACAGACTAAGGCACCATT+TGG | 0.404439 | 4_1:+79868031 | Msa0575890:intron |
| GATGTATGAATATATAATTT+AGG | 0.408374 | 4_1:+79869416 | Msa0575890:three_prime_UTR |
| ACAAACGCGTTTGTATTGTT+TGG | 0.408535 | 4_1:+79867507 | Msa0575890:five_prime_UTR |
| TTTGTATTGTTTGGTTGGAT+TGG | 0.408937 | 4_1:+79867516 | Msa0575890:five_prime_UTR |
| TTGTAGCTCTGCTTCTGTTA+GGG | 0.423721 | 4_1:-79869154 | None:intergenic |
| TTGGTTGGATTGGATTGGAT+TGG | 0.427431 | 4_1:+79867526 | Msa0575890:five_prime_UTR |
| CTTGGCATTGCCTTAAAATC+CGG | 0.434167 | 4_1:+79868100 | Msa0575890:CDS |
| AAATGTTGTTCAACTTGTGC+TGG | 0.438263 | 4_1:+79868285 | Msa0575890:CDS |
| ATTGTTTGGTTGGATTGGAT+TGG | 0.439833 | 4_1:+79867521 | Msa0575890:five_prime_UTR |
| AGGCACCATTTGGATATTCA+AGG | 0.473273 | 4_1:+79868041 | Msa0575890:CDS |
| CTCTAATAATAATCAGACTA+AGG | 0.483910 | 4_1:+79867909 | Msa0575890:CDS |
| CTCCTCCAATGATTTGGATC+AGG | 0.484089 | 4_1:+79867879 | Msa0575890:CDS |
| ACGCGTTTGTATTGTTTGGT+TGG | 0.486626 | 4_1:+79867511 | Msa0575890:five_prime_UTR |
| GGTGTCCTGATCCAAATCAT+TGG | 0.489290 | 4_1:-79867884 | None:intergenic |
| TTCCTCATTTATGAATTCCA+TGG | 0.493018 | 4_1:-79869586 | None:intergenic |
| GGTGAGAAGATGATGAGATC+AGG | 0.499942 | 4_1:-79867565 | None:intergenic |
| TCTTTCCTTGAATATCCAAA+TGG | 0.501246 | 4_1:-79868046 | None:intergenic |
| AGCCATGTTGAAGGCAGCAT+TGG | 0.507098 | 4_1:+79869489 | Msa0575890:three_prime_UTR |
| TCATTGGAGGAGTTTGAAGA+AGG | 0.511201 | 4_1:-79867868 | None:intergenic |
| TTCCATGGAATTCATAAATG+AGG | 0.511503 | 4_1:+79869584 | Msa0575890:three_prime_UTR |
| CATTGGAGGAGTTTGAAGAA+GGG | 0.516349 | 4_1:-79867867 | None:intergenic |
| GAGGCAGGTCGTAGTAAGAA+AGG | 0.517750 | 4_1:-79867659 | None:intergenic |
| GGACTTGGAGTTACTCTCCT+TGG | 0.518727 | 4_1:+79868082 | Msa0575890:CDS |
| GAGTTGAGATACCTCAAGTC+CGG | 0.520453 | 4_1:-79868119 | None:intergenic |
| GATGTCATATTAATCGGACT+TGG | 0.523993 | 4_1:+79868067 | Msa0575890:CDS |
| GGCATGAGGTGCACTGCCAC+TGG | 0.528111 | 4_1:-79869459 | None:intergenic |
| TTCTTATTGCTGGTCACCAG+TGG | 0.540885 | 4_1:+79869443 | Msa0575890:three_prime_UTR |
| AATGTTGTTAACGCAGCCAC+AGG | 0.542166 | 4_1:+79867692 | Msa0575890:CDS |
| CCATGGTGGAGCCATGTTGA+AGG | 0.548793 | 4_1:+79869480 | Msa0575890:three_prime_UTR |
| GTCGTTAGCTAGTAATGAAG+AGG | 0.557550 | 4_1:+79869208 | Msa0575890:exon |
| TGCCTTAAAATCCGGACTTG+AGG | 0.557648 | 4_1:+79868108 | Msa0575890:CDS |
| ATAAACAGAAGCTAATTCCA+TGG | 0.560523 | 4_1:+79869569 | Msa0575890:three_prime_UTR |
| TTTGTTGCATTTGCAATGAA+CGG | 0.565559 | 4_1:+79869643 | Msa0575890:three_prime_UTR |
| ACAACATTTCCAGCTTGTAG+TGG | 0.569187 | 4_1:-79868271 | None:intergenic |
| GGATTTGATCCACTACAAGC+TGG | 0.572158 | 4_1:+79868262 | Msa0575890:CDS |
| TGGCAGTGCACCTCATGCCA+TGG | 0.574125 | 4_1:+79869463 | Msa0575890:three_prime_UTR |
| TGACTACGAAAGTAAAGTCA+TGG | 0.582776 | 4_1:+79868390 | Msa0575890:CDS |
| AGTCTGATTATTATTAGAGG+AGG | 0.586722 | 4_1:-79867905 | None:intergenic |
| CAGTGCACCTCATGCCATGG+TGG | 0.589732 | 4_1:+79869466 | Msa0575890:three_prime_UTR |
| GTCCTGATCCAAATCATTGG+AGG | 0.603575 | 4_1:-79867881 | None:intergenic |
| TTCCAATGCTGCCTTCAACA+TGG | 0.612096 | 4_1:-79869491 | None:intergenic |
| AACAACATTGAAAGGTGAAG+AGG | 0.612554 | 4_1:-79867678 | None:intergenic |
| CCTTCAACATGGCTCCACCA+TGG | 0.629439 | 4_1:-79869480 | None:intergenic |
| CATGGCTCCACCATGGCATG+AGG | 0.633481 | 4_1:-79869473 | None:intergenic |
| ACATTGAAAGGTGAAGAGGC+AGG | 0.641397 | 4_1:-79867674 | None:intergenic |
| AGTACTGCTTCAAGAAGTCG+AGG | 0.646449 | 4_1:+79869176 | Msa0575890:CDS |
| TATCTTCAGAGTCTCAAACA+AGG | 0.652304 | 4_1:+79868342 | Msa0575890:CDS |
| GCAGGTCGTAGTAAGAAAGG+TGG | 0.671840 | 4_1:-79867656 | None:intergenic |
| GCTGCGTTAACAACATTGAA+AGG | 0.673450 | 4_1:-79867686 | None:intergenic |
| TTGAGATCCATCCAACAGTG+AGG | 0.728057 | 4_1:-79868315 | None:intergenic |
| CTACGAAAGTAAAGTCATGG+AGG | 0.745272 | 4_1:+79868393 | Msa0575890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAATAAATTATTAAGAG+TGG | - | chr4_1:79867755-79867774 | None:intergenic | 10.0% |
| !!! | TTTTCATTATTGATTTATTT+GGG | + | chr4_1:79868773-79868792 | Msa0575890:intron | 10.0% |
| !! | TTTAAATAAATTATTAAGAG+TGG | - | chr4_1:79867755-79867774 | None:intergenic | 10.0% |
| !!! | TTTTCATTATTGATTTATTT+GGG | + | chr4_1:79868773-79868792 | Msa0575890:intron | 10.0% |
| !! | TCTTCATATATTGTATTAAT+CGG | + | chr4_1:79867941-79867960 | Msa0575890:intron | 15.0% |
| !! | CAAATAAATCAATAATGAAA+AGG | - | chr4_1:79868774-79868793 | None:intergenic | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+TGG | + | chr4_1:79868772-79868791 | Msa0575890:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | - | chr4_1:79868847-79868866 | None:intergenic | 15.0% |
| !! | GATGTATGAATATATAATTT+AGG | + | chr4_1:79869416-79869435 | Msa0575890:three_prime_UTR | 15.0% |
| !! | AAATAATAGCTTCAAATAAA+TGG | - | chr4_1:79869540-79869559 | None:intergenic | 15.0% |
| !! | TCTTCATATATTGTATTAAT+CGG | + | chr4_1:79867941-79867960 | Msa0575890:intron | 15.0% |
| !! | CAAATAAATCAATAATGAAA+AGG | - | chr4_1:79868774-79868793 | None:intergenic | 15.0% |
| !!! | CTTTTCATTATTGATTTATT+TGG | + | chr4_1:79868772-79868791 | Msa0575890:intron | 15.0% |
| !!! | AATGTAAAACATTTTGAATA+AGG | - | chr4_1:79868847-79868866 | None:intergenic | 15.0% |
| !! | GATGTATGAATATATAATTT+AGG | + | chr4_1:79869416-79869435 | Msa0575890:three_prime_UTR | 15.0% |
| !! | AAATAATAGCTTCAAATAAA+TGG | - | chr4_1:79869540-79869559 | None:intergenic | 15.0% |
| !!! | TATTTATTTGTTACAGACTA+AGG | + | chr4_1:79868021-79868040 | Msa0575890:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | - | chr4_1:79868843-79868862 | None:intergenic | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | - | chr4_1:79869110-79869129 | None:intergenic | 20.0% |
| !! | AACCGAAAACATAATATATA+TGG | + | chr4_1:79869285-79869304 | Msa0575890:three_prime_UTR | 20.0% |
| !!! | GTCCATATATATTATGTTTT+CGG | - | chr4_1:79869290-79869309 | None:intergenic | 20.0% |
| !!! | TCATTAGAGTTATTTTCATA+TGG | - | chr4_1:79869398-79869417 | None:intergenic | 20.0% |
| !! | AGATGTAAATTACTATCATT+TGG | + | chr4_1:79869680-79869699 | Msa0575890:three_prime_UTR | 20.0% |
| !!! | TATTTATTTGTTACAGACTA+AGG | + | chr4_1:79868021-79868040 | Msa0575890:intron | 20.0% |
| !!! | TAAAACATTTTGAATAAGGT+TGG | - | chr4_1:79868843-79868862 | None:intergenic | 20.0% |
| !! | ATAGAGGTAAAATTATTCTA+TGG | - | chr4_1:79869110-79869129 | None:intergenic | 20.0% |
| !! | AACCGAAAACATAATATATA+TGG | + | chr4_1:79869285-79869304 | Msa0575890:three_prime_UTR | 20.0% |
| !!! | GTCCATATATATTATGTTTT+CGG | - | chr4_1:79869290-79869309 | None:intergenic | 20.0% |
| !!! | TCATTAGAGTTATTTTCATA+TGG | - | chr4_1:79869398-79869417 | None:intergenic | 20.0% |
| !! | AGATGTAAATTACTATCATT+TGG | + | chr4_1:79869680-79869699 | Msa0575890:three_prime_UTR | 20.0% |
| ! | ATGATTCATTGAAAACAACT+TGG | - | chr4_1:79867824-79867843 | None:intergenic | 25.0% |
| ! | CTTAGTCTGATTATTATTAG+AGG | - | chr4_1:79867911-79867930 | None:intergenic | 25.0% |
| ! | CTCTAATAATAATCAGACTA+AGG | + | chr4_1:79867909-79867928 | Msa0575890:CDS | 25.0% |
| ! | AGGAAAGATGTCATATTAAT+CGG | + | chr4_1:79868061-79868080 | Msa0575890:CDS | 25.0% |
| ! | ATTAATCATGCAACTATTCT+TGG | + | chr4_1:79868218-79868237 | Msa0575890:intron | 25.0% |
| !!! | ATATATTTTTTGCAGTTTGC+AGG | + | chr4_1:79868241-79868260 | Msa0575890:intron | 25.0% |
| ! | GAGGTAAAATAATACTAACA+TGG | + | chr4_1:79868412-79868431 | Msa0575890:intron | 25.0% |
| !! | AGCATGATATTTTCCTTTTT+GGG | - | chr4_1:79868554-79868573 | None:intergenic | 25.0% |
| !! | TAGCATGATATTTTCCTTTT+TGG | - | chr4_1:79868555-79868574 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | - | chr4_1:79868639-79868658 | None:intergenic | 25.0% |
| !!! | TTGTACCTTTTTATTTCACA+TGG | + | chr4_1:79868669-79868688 | Msa0575890:intron | 25.0% |
| ! | ATGTACCATGTGAAATAAAA+AGG | - | chr4_1:79868677-79868696 | None:intergenic | 25.0% |
| ! | CTTATTAACTCAGATATCAA+AGG | - | chr4_1:79868872-79868891 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | + | chr4_1:79869013-79869032 | Msa0575890:intron | 25.0% |
| ! | ATGACTGAAGTTATAAACTT+GGG | + | chr4_1:79869041-79869060 | Msa0575890:intron | 25.0% |
| ! | ATGATTCATTGAAAACAACT+TGG | - | chr4_1:79867824-79867843 | None:intergenic | 25.0% |
| ! | CTTAGTCTGATTATTATTAG+AGG | - | chr4_1:79867911-79867930 | None:intergenic | 25.0% |
| ! | CTCTAATAATAATCAGACTA+AGG | + | chr4_1:79867909-79867928 | Msa0575890:CDS | 25.0% |
| ! | AGGAAAGATGTCATATTAAT+CGG | + | chr4_1:79868061-79868080 | Msa0575890:CDS | 25.0% |
| ! | ATTAATCATGCAACTATTCT+TGG | + | chr4_1:79868218-79868237 | Msa0575890:intron | 25.0% |
| !!! | ATATATTTTTTGCAGTTTGC+AGG | + | chr4_1:79868241-79868260 | Msa0575890:intron | 25.0% |
| ! | GAGGTAAAATAATACTAACA+TGG | + | chr4_1:79868412-79868431 | Msa0575890:intron | 25.0% |
| !! | AGCATGATATTTTCCTTTTT+GGG | - | chr4_1:79868554-79868573 | None:intergenic | 25.0% |
| !! | TAGCATGATATTTTCCTTTT+TGG | - | chr4_1:79868555-79868574 | None:intergenic | 25.0% |
| ! | GAATAATATCTTCTGACTTA+CGG | - | chr4_1:79868639-79868658 | None:intergenic | 25.0% |
| !!! | TTGTACCTTTTTATTTCACA+TGG | + | chr4_1:79868669-79868688 | Msa0575890:intron | 25.0% |
| ! | ATGTACCATGTGAAATAAAA+AGG | - | chr4_1:79868677-79868696 | None:intergenic | 25.0% |
| ! | CTTATTAACTCAGATATCAA+AGG | - | chr4_1:79868872-79868891 | None:intergenic | 25.0% |
| ! | AATGAAATATTTCTTTCCGA+AGG | + | chr4_1:79869013-79869032 | Msa0575890:intron | 25.0% |
| ! | ATGACTGAAGTTATAAACTT+GGG | + | chr4_1:79869041-79869060 | Msa0575890:intron | 25.0% |
| TTTGTATTGTTTGGTTGGAT+TGG | + | chr4_1:79867516-79867535 | Msa0575890:five_prime_UTR | 30.0% | |
| ATACGCAGAAAAAACTTCTT+AGG | - | chr4_1:79867589-79867608 | None:intergenic | 30.0% | |
| AAAAATGAAGTTTGTACCTG+TGG | - | chr4_1:79867711-79867730 | None:intergenic | 30.0% | |
| AAATTGAATTGCTCATCATC+AGG | + | chr4_1:79867772-79867791 | Msa0575890:intron | 30.0% | |
| AGTCTGATTATTATTAGAGG+AGG | - | chr4_1:79867908-79867927 | None:intergenic | 30.0% | |
| TCTTTCCTTGAATATCCAAA+TGG | - | chr4_1:79868049-79868068 | None:intergenic | 30.0% | |
| GGCATGCTTAAAACAATAAA+AGG | - | chr4_1:79868441-79868460 | None:intergenic | 30.0% | |
| !!! | TTTATTGTTTTAAGCATGCC+TGG | + | chr4_1:79868441-79868460 | Msa0575890:intron | 30.0% |
| !!! | TTATTGTTTTAAGCATGCCT+GGG | + | chr4_1:79868442-79868461 | Msa0575890:intron | 30.0% |
| ATACTTTATGTAGTAGTCTG+CGG | + | chr4_1:79868503-79868522 | Msa0575890:intron | 30.0% | |
| ! | GCATGATATTTTCCTTTTTG+GGG | - | chr4_1:79868553-79868572 | None:intergenic | 30.0% |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | + | chr4_1:79868598-79868617 | Msa0575890:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | - | chr4_1:79868707-79868726 | None:intergenic | 30.0% | |
| GATGACTGAAGTTATAAACT+TGG | + | chr4_1:79869040-79869059 | Msa0575890:intron | 30.0% | |
| !! | TTTCATAAGCACTGTAGTTT+TGG | - | chr4_1:79869371-79869390 | None:intergenic | 30.0% |
| !! | TTTAGGACTTTTCTTATTGC+TGG | + | chr4_1:79869433-79869452 | Msa0575890:three_prime_UTR | 30.0% |
| ATAAACAGAAGCTAATTCCA+TGG | + | chr4_1:79869569-79869588 | Msa0575890:three_prime_UTR | 30.0% | |
| TTCCATGGAATTCATAAATG+AGG | + | chr4_1:79869584-79869603 | Msa0575890:three_prime_UTR | 30.0% | |
| TTCCTCATTTATGAATTCCA+TGG | - | chr4_1:79869589-79869608 | None:intergenic | 30.0% | |
| TTTGTTGCATTTGCAATGAA+CGG | + | chr4_1:79869643-79869662 | Msa0575890:three_prime_UTR | 30.0% | |
| TTTGTATTGTTTGGTTGGAT+TGG | + | chr4_1:79867516-79867535 | Msa0575890:five_prime_UTR | 30.0% | |
| ATACGCAGAAAAAACTTCTT+AGG | - | chr4_1:79867589-79867608 | None:intergenic | 30.0% | |
| AAAAATGAAGTTTGTACCTG+TGG | - | chr4_1:79867711-79867730 | None:intergenic | 30.0% | |
| AAATTGAATTGCTCATCATC+AGG | + | chr4_1:79867772-79867791 | Msa0575890:intron | 30.0% | |
| AGTCTGATTATTATTAGAGG+AGG | - | chr4_1:79867908-79867927 | None:intergenic | 30.0% | |
| TCTTTCCTTGAATATCCAAA+TGG | - | chr4_1:79868049-79868068 | None:intergenic | 30.0% | |
| GGCATGCTTAAAACAATAAA+AGG | - | chr4_1:79868441-79868460 | None:intergenic | 30.0% | |
| !!! | TTTATTGTTTTAAGCATGCC+TGG | + | chr4_1:79868441-79868460 | Msa0575890:intron | 30.0% |
| !!! | TTATTGTTTTAAGCATGCCT+GGG | + | chr4_1:79868442-79868461 | Msa0575890:intron | 30.0% |
| ATACTTTATGTAGTAGTCTG+CGG | + | chr4_1:79868503-79868522 | Msa0575890:intron | 30.0% | |
| ! | GCATGATATTTTCCTTTTTG+GGG | - | chr4_1:79868553-79868572 | None:intergenic | 30.0% |
| ! | GTTTTGTCCTAAAATCGTTT+TGG | + | chr4_1:79868598-79868617 | Msa0575890:intron | 30.0% |
| CATTTGTTTGACAAGAACTT+TGG | - | chr4_1:79868707-79868726 | None:intergenic | 30.0% | |
| GATGACTGAAGTTATAAACT+TGG | + | chr4_1:79869040-79869059 | Msa0575890:intron | 30.0% | |
| !! | TTTCATAAGCACTGTAGTTT+TGG | - | chr4_1:79869371-79869390 | None:intergenic | 30.0% |
| !! | TTTAGGACTTTTCTTATTGC+TGG | + | chr4_1:79869433-79869452 | Msa0575890:three_prime_UTR | 30.0% |
| ATAAACAGAAGCTAATTCCA+TGG | + | chr4_1:79869569-79869588 | Msa0575890:three_prime_UTR | 30.0% | |
| TTCCATGGAATTCATAAATG+AGG | + | chr4_1:79869584-79869603 | Msa0575890:three_prime_UTR | 30.0% | |
| TTCCTCATTTATGAATTCCA+TGG | - | chr4_1:79869589-79869608 | None:intergenic | 30.0% | |
| TTTGTTGCATTTGCAATGAA+CGG | + | chr4_1:79869643-79869662 | Msa0575890:three_prime_UTR | 30.0% | |
| ACAAACGCGTTTGTATTGTT+TGG | + | chr4_1:79867507-79867526 | Msa0575890:five_prime_UTR | 35.0% | |
| ! | ATTGTTTGGTTGGATTGGAT+TGG | + | chr4_1:79867521-79867540 | Msa0575890:five_prime_UTR | 35.0% |
| AACAACATTGAAAGGTGAAG+AGG | - | chr4_1:79867681-79867700 | None:intergenic | 35.0% | |
| TTCAAACTCCTCCAATGATT+TGG | + | chr4_1:79867873-79867892 | Msa0575890:CDS | 35.0% | |
| GATGTCATATTAATCGGACT+TGG | + | chr4_1:79868067-79868086 | Msa0575890:CDS | 35.0% | |
| ! | ATTTTCCAATTACCACACAC+AGG | + | chr4_1:79868167-79868186 | Msa0575890:intron | 35.0% |
| AAATGTTGTTCAACTTGTGC+TGG | + | chr4_1:79868285-79868304 | Msa0575890:CDS | 35.0% | |
| TATCTTCAGAGTCTCAAACA+AGG | + | chr4_1:79868342-79868361 | Msa0575890:CDS | 35.0% | |
| TGACTACGAAAGTAAAGTCA+TGG | + | chr4_1:79868390-79868409 | Msa0575890:CDS | 35.0% | |
| GTCTTCAAAATGCTGAAATG+TGG | + | chr4_1:79868525-79868544 | Msa0575890:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | - | chr4_1:79868608-79868627 | None:intergenic | 35.0% |
| GAATGTTTAACAGTCTCTCA+GGG | - | chr4_1:79868964-79868983 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | - | chr4_1:79868965-79868984 | None:intergenic | 35.0% | |
| ACTTCAGTCATCTATACCTT+CGG | - | chr4_1:79869032-79869051 | None:intergenic | 35.0% | |
| ACAAACGCGTTTGTATTGTT+TGG | + | chr4_1:79867507-79867526 | Msa0575890:five_prime_UTR | 35.0% | |
| ! | ATTGTTTGGTTGGATTGGAT+TGG | + | chr4_1:79867521-79867540 | Msa0575890:five_prime_UTR | 35.0% |
| AACAACATTGAAAGGTGAAG+AGG | - | chr4_1:79867681-79867700 | None:intergenic | 35.0% | |
| TTCAAACTCCTCCAATGATT+TGG | + | chr4_1:79867873-79867892 | Msa0575890:CDS | 35.0% | |
| GATGTCATATTAATCGGACT+TGG | + | chr4_1:79868067-79868086 | Msa0575890:CDS | 35.0% | |
| ! | ATTTTCCAATTACCACACAC+AGG | + | chr4_1:79868167-79868186 | Msa0575890:intron | 35.0% |
| AAATGTTGTTCAACTTGTGC+TGG | + | chr4_1:79868285-79868304 | Msa0575890:CDS | 35.0% | |
| TATCTTCAGAGTCTCAAACA+AGG | + | chr4_1:79868342-79868361 | Msa0575890:CDS | 35.0% | |
| TGACTACGAAAGTAAAGTCA+TGG | + | chr4_1:79868390-79868409 | Msa0575890:CDS | 35.0% | |
| GTCTTCAAAATGCTGAAATG+TGG | + | chr4_1:79868525-79868544 | Msa0575890:intron | 35.0% | |
| ! | TCTTTGGCCAAAACGATTTT+AGG | - | chr4_1:79868608-79868627 | None:intergenic | 35.0% |
| GAATGTTTAACAGTCTCTCA+GGG | - | chr4_1:79868964-79868983 | None:intergenic | 35.0% | |
| TGAATGTTTAACAGTCTCTC+AGG | - | chr4_1:79868965-79868984 | None:intergenic | 35.0% | |
| ACTTCAGTCATCTATACCTT+CGG | - | chr4_1:79869032-79869051 | None:intergenic | 35.0% | |
| ACGCGTTTGTATTGTTTGGT+TGG | + | chr4_1:79867511-79867530 | Msa0575890:five_prime_UTR | 40.0% | |
| ! | TTGGTTGGATTGGATTGGAT+TGG | + | chr4_1:79867526-79867545 | Msa0575890:five_prime_UTR | 40.0% |
| ! | TGGATTGGATTGGATTGGAT+TGG | + | chr4_1:79867531-79867550 | Msa0575890:five_prime_UTR | 40.0% |
| GCTGCGTTAACAACATTGAA+AGG | - | chr4_1:79867689-79867708 | None:intergenic | 40.0% | |
| CATTGGAGGAGTTTGAAGAA+GGG | - | chr4_1:79867870-79867889 | None:intergenic | 40.0% | |
| TCATTGGAGGAGTTTGAAGA+AGG | - | chr4_1:79867871-79867890 | None:intergenic | 40.0% | |
| ! | TTACAGACTAAGGCACCATT+TGG | + | chr4_1:79868031-79868050 | Msa0575890:intron | 40.0% |
| AGGCACCATTTGGATATTCA+AGG | + | chr4_1:79868041-79868060 | Msa0575890:CDS | 40.0% | |
| CTTGGCATTGCCTTAAAATC+CGG | + | chr4_1:79868100-79868119 | Msa0575890:CDS | 40.0% | |
| ! | TACCTCAAGTCCGGATTTTA+AGG | - | chr4_1:79868113-79868132 | None:intergenic | 40.0% |
| ACAACATTTCCAGCTTGTAG+TGG | - | chr4_1:79868274-79868293 | None:intergenic | 40.0% | |
| !!! | TGTTCAACTTGTGCTGGTTT+TGG | + | chr4_1:79868291-79868310 | Msa0575890:CDS | 40.0% |
| !!! | GTTCAACTTGTGCTGGTTTT+GGG | + | chr4_1:79868292-79868311 | Msa0575890:CDS | 40.0% |
| CTACGAAAGTAAAGTCATGG+AGG | + | chr4_1:79868393-79868412 | Msa0575890:CDS | 40.0% | |
| CAAAGAATAACAAGAAGCCC+AGG | - | chr4_1:79868462-79868481 | None:intergenic | 40.0% | |
| !! | CGTTTTGGCCAAAGATAATC+AGG | + | chr4_1:79868613-79868632 | Msa0575890:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | - | chr4_1:79868624-79868643 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | + | chr4_1:79869124-79869143 | Msa0575890:intron | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | - | chr4_1:79869157-79869176 | None:intergenic | 40.0% |
| GTCGTTAGCTAGTAATGAAG+AGG | + | chr4_1:79869208-79869227 | Msa0575890:exon | 40.0% | |
| ! | TTGAAGGCAGCATTGGAATT+TGG | + | chr4_1:79869496-79869515 | Msa0575890:three_prime_UTR | 40.0% |
| ACGCGTTTGTATTGTTTGGT+TGG | + | chr4_1:79867511-79867530 | Msa0575890:five_prime_UTR | 40.0% | |
| ! | TTGGTTGGATTGGATTGGAT+TGG | + | chr4_1:79867526-79867545 | Msa0575890:five_prime_UTR | 40.0% |
| ! | TGGATTGGATTGGATTGGAT+TGG | + | chr4_1:79867531-79867550 | Msa0575890:five_prime_UTR | 40.0% |
| GCTGCGTTAACAACATTGAA+AGG | - | chr4_1:79867689-79867708 | None:intergenic | 40.0% | |
| CATTGGAGGAGTTTGAAGAA+GGG | - | chr4_1:79867870-79867889 | None:intergenic | 40.0% | |
| TCATTGGAGGAGTTTGAAGA+AGG | - | chr4_1:79867871-79867890 | None:intergenic | 40.0% | |
| ! | TTACAGACTAAGGCACCATT+TGG | + | chr4_1:79868031-79868050 | Msa0575890:intron | 40.0% |
| AGGCACCATTTGGATATTCA+AGG | + | chr4_1:79868041-79868060 | Msa0575890:CDS | 40.0% | |
| CTTGGCATTGCCTTAAAATC+CGG | + | chr4_1:79868100-79868119 | Msa0575890:CDS | 40.0% | |
| ! | TACCTCAAGTCCGGATTTTA+AGG | - | chr4_1:79868113-79868132 | None:intergenic | 40.0% |
| ACAACATTTCCAGCTTGTAG+TGG | - | chr4_1:79868274-79868293 | None:intergenic | 40.0% | |
| !!! | TGTTCAACTTGTGCTGGTTT+TGG | + | chr4_1:79868291-79868310 | Msa0575890:CDS | 40.0% |
| !!! | GTTCAACTTGTGCTGGTTTT+GGG | + | chr4_1:79868292-79868311 | Msa0575890:CDS | 40.0% |
| CTACGAAAGTAAAGTCATGG+AGG | + | chr4_1:79868393-79868412 | Msa0575890:CDS | 40.0% | |
| CAAAGAATAACAAGAAGCCC+AGG | - | chr4_1:79868462-79868481 | None:intergenic | 40.0% | |
| !! | CGTTTTGGCCAAAGATAATC+AGG | + | chr4_1:79868613-79868632 | Msa0575890:intron | 40.0% |
| ACTTACGGCCTGATTATCTT+TGG | - | chr4_1:79868624-79868643 | None:intergenic | 40.0% | |
| CTCTATTGAATCTGCAGAAG+CGG | + | chr4_1:79869124-79869143 | Msa0575890:intron | 40.0% | |
| ! | TTGTAGCTCTGCTTCTGTTA+GGG | - | chr4_1:79869157-79869176 | None:intergenic | 40.0% |
| GTCGTTAGCTAGTAATGAAG+AGG | + | chr4_1:79869208-79869227 | Msa0575890:exon | 40.0% | |
| ! | TTGAAGGCAGCATTGGAATT+TGG | + | chr4_1:79869496-79869515 | Msa0575890:three_prime_UTR | 40.0% |
| GGTGAGAAGATGATGAGATC+AGG | - | chr4_1:79867568-79867587 | None:intergenic | 45.0% | |
| ACATTGAAAGGTGAAGAGGC+AGG | - | chr4_1:79867677-79867696 | None:intergenic | 45.0% | |
| AATGTTGTTAACGCAGCCAC+AGG | + | chr4_1:79867692-79867711 | Msa0575890:CDS | 45.0% | |
| ACACTCAGAAAGAGCTTCAG+TGG | + | chr4_1:79867796-79867815 | Msa0575890:intron | 45.0% | |
| ! | CTCCTCCAATGATTTGGATC+AGG | + | chr4_1:79867879-79867898 | Msa0575890:CDS | 45.0% |
| GTCCTGATCCAAATCATTGG+AGG | - | chr4_1:79867884-79867903 | None:intergenic | 45.0% | |
| GGTGTCCTGATCCAAATCAT+TGG | - | chr4_1:79867887-79867906 | None:intergenic | 45.0% | |
| !!! | CGGATTTTAAGGCAATGCCA+AGG | - | chr4_1:79868102-79868121 | None:intergenic | 45.0% |
| TGCCTTAAAATCCGGACTTG+AGG | + | chr4_1:79868108-79868127 | Msa0575890:CDS | 45.0% | |
| GAGTTGAGATACCTCAAGTC+CGG | - | chr4_1:79868122-79868141 | None:intergenic | 45.0% | |
| AAGTGCCTGTGTGTGGTAAT+TGG | - | chr4_1:79868175-79868194 | None:intergenic | 45.0% | |
| CAAACATAAGTGCCTGTGTG+TGG | - | chr4_1:79868182-79868201 | None:intergenic | 45.0% | |
| GGATTTGATCCACTACAAGC+TGG | + | chr4_1:79868262-79868281 | Msa0575890:CDS | 45.0% | |
| TTGAGATCCATCCAACAGTG+AGG | - | chr4_1:79868318-79868337 | None:intergenic | 45.0% | |
| TGAAATGTGGTGCCCCAAAA+AGG | + | chr4_1:79868538-79868557 | Msa0575890:intron | 45.0% | |
| !! | AGTCTCTCAGGGTTGATACA+TGG | - | chr4_1:79868953-79868972 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | + | chr4_1:79869052-79869071 | Msa0575890:intron | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | - | chr4_1:79869126-79869145 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | - | chr4_1:79869158-79869177 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | + | chr4_1:79869176-79869195 | Msa0575890:CDS | 45.0% | |
| TTCTTATTGCTGGTCACCAG+TGG | + | chr4_1:79869443-79869462 | Msa0575890:three_prime_UTR | 45.0% | |
| TTCCAATGCTGCCTTCAACA+TGG | - | chr4_1:79869494-79869513 | None:intergenic | 45.0% | |
| GGTGAGAAGATGATGAGATC+AGG | - | chr4_1:79867568-79867587 | None:intergenic | 45.0% | |
| ACATTGAAAGGTGAAGAGGC+AGG | - | chr4_1:79867677-79867696 | None:intergenic | 45.0% | |
| AATGTTGTTAACGCAGCCAC+AGG | + | chr4_1:79867692-79867711 | Msa0575890:CDS | 45.0% | |
| ACACTCAGAAAGAGCTTCAG+TGG | + | chr4_1:79867796-79867815 | Msa0575890:intron | 45.0% | |
| ! | CTCCTCCAATGATTTGGATC+AGG | + | chr4_1:79867879-79867898 | Msa0575890:CDS | 45.0% |
| GTCCTGATCCAAATCATTGG+AGG | - | chr4_1:79867884-79867903 | None:intergenic | 45.0% | |
| GGTGTCCTGATCCAAATCAT+TGG | - | chr4_1:79867887-79867906 | None:intergenic | 45.0% | |
| !!! | CGGATTTTAAGGCAATGCCA+AGG | - | chr4_1:79868102-79868121 | None:intergenic | 45.0% |
| TGCCTTAAAATCCGGACTTG+AGG | + | chr4_1:79868108-79868127 | Msa0575890:CDS | 45.0% | |
| GAGTTGAGATACCTCAAGTC+CGG | - | chr4_1:79868122-79868141 | None:intergenic | 45.0% | |
| AAGTGCCTGTGTGTGGTAAT+TGG | - | chr4_1:79868175-79868194 | None:intergenic | 45.0% | |
| CAAACATAAGTGCCTGTGTG+TGG | - | chr4_1:79868182-79868201 | None:intergenic | 45.0% | |
| GGATTTGATCCACTACAAGC+TGG | + | chr4_1:79868262-79868281 | Msa0575890:CDS | 45.0% | |
| TTGAGATCCATCCAACAGTG+AGG | - | chr4_1:79868318-79868337 | None:intergenic | 45.0% | |
| TGAAATGTGGTGCCCCAAAA+AGG | + | chr4_1:79868538-79868557 | Msa0575890:intron | 45.0% | |
| !! | AGTCTCTCAGGGTTGATACA+TGG | - | chr4_1:79868953-79868972 | None:intergenic | 45.0% |
| TATAAACTTGGGTCTGCAGC+AGG | + | chr4_1:79869052-79869071 | Msa0575890:intron | 45.0% | |
| CGCTTCTGCAGATTCAATAG+AGG | - | chr4_1:79869126-79869145 | None:intergenic | 45.0% | |
| ! | CTTGTAGCTCTGCTTCTGTT+AGG | - | chr4_1:79869158-79869177 | None:intergenic | 45.0% |
| AGTACTGCTTCAAGAAGTCG+AGG | + | chr4_1:79869176-79869195 | Msa0575890:CDS | 45.0% | |
| TTCTTATTGCTGGTCACCAG+TGG | + | chr4_1:79869443-79869462 | Msa0575890:three_prime_UTR | 45.0% | |
| TTCCAATGCTGCCTTCAACA+TGG | - | chr4_1:79869494-79869513 | None:intergenic | 45.0% | |
| GCAGGTCGTAGTAAGAAAGG+TGG | - | chr4_1:79867659-79867678 | None:intergenic | 50.0% | |
| GAGGCAGGTCGTAGTAAGAA+AGG | - | chr4_1:79867662-79867681 | None:intergenic | 50.0% | |
| GGACTTGGAGTTACTCTCCT+TGG | + | chr4_1:79868082-79868101 | Msa0575890:CDS | 50.0% | |
| ! | TTTTGGGCCTCACTGTTGGA+TGG | + | chr4_1:79868308-79868327 | Msa0575890:CDS | 50.0% |
| AGCCATGTTGAAGGCAGCAT+TGG | + | chr4_1:79869489-79869508 | Msa0575890:three_prime_UTR | 50.0% | |
| GCAGGTCGTAGTAAGAAAGG+TGG | - | chr4_1:79867659-79867678 | None:intergenic | 50.0% | |
| GAGGCAGGTCGTAGTAAGAA+AGG | - | chr4_1:79867662-79867681 | None:intergenic | 50.0% | |
| GGACTTGGAGTTACTCTCCT+TGG | + | chr4_1:79868082-79868101 | Msa0575890:CDS | 50.0% | |
| ! | TTTTGGGCCTCACTGTTGGA+TGG | + | chr4_1:79868308-79868327 | Msa0575890:CDS | 50.0% |
| AGCCATGTTGAAGGCAGCAT+TGG | + | chr4_1:79869489-79869508 | Msa0575890:three_prime_UTR | 50.0% | |
| !!! | CTGGTTTTGGGCCTCACTGT+TGG | + | chr4_1:79868304-79868323 | Msa0575890:CDS | 55.0% |
| CCTTCAACATGGCTCCACCA+TGG | - | chr4_1:79869483-79869502 | None:intergenic | 55.0% | |
| ! | CCATGGTGGAGCCATGTTGA+AGG | + | chr4_1:79869480-79869499 | Msa0575890:three_prime_UTR | 55.0% |
| !!! | CTGGTTTTGGGCCTCACTGT+TGG | + | chr4_1:79868304-79868323 | Msa0575890:CDS | 55.0% |
| CCTTCAACATGGCTCCACCA+TGG | - | chr4_1:79869483-79869502 | None:intergenic | 55.0% | |
| ! | CCATGGTGGAGCCATGTTGA+AGG | + | chr4_1:79869480-79869499 | Msa0575890:three_prime_UTR | 55.0% |
| TGGCAGTGCACCTCATGCCA+TGG | + | chr4_1:79869463-79869482 | Msa0575890:three_prime_UTR | 60.0% | |
| CAGTGCACCTCATGCCATGG+TGG | + | chr4_1:79869466-79869485 | Msa0575890:three_prime_UTR | 60.0% | |
| CATGGCTCCACCATGGCATG+AGG | - | chr4_1:79869476-79869495 | None:intergenic | 60.0% | |
| TGGCAGTGCACCTCATGCCA+TGG | + | chr4_1:79869463-79869482 | Msa0575890:three_prime_UTR | 60.0% | |
| CAGTGCACCTCATGCCATGG+TGG | + | chr4_1:79869466-79869485 | Msa0575890:three_prime_UTR | 60.0% | |
| CATGGCTCCACCATGGCATG+AGG | - | chr4_1:79869476-79869495 | None:intergenic | 60.0% | |
| GGCATGAGGTGCACTGCCAC+TGG | - | chr4_1:79869462-79869481 | None:intergenic | 65.0% | |
| GGCATGAGGTGCACTGCCAC+TGG | - | chr4_1:79869462-79869481 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 79867505 | 79869760 | 79867505 | ID=Msa0575890;Name=Msa0575890 |
| chr4_1 | mRNA | 79867505 | 79869760 | 79867505 | ID=Msa0575890-mRNA-1;Parent=Msa0575890;Name=Msa0575890-mRNA-1;_AED=0.09;_eAED=0.15;_QI=115|0.5|0.8|1|1|1|5|545|166 |
| chr4_1 | exon | 79867505 | 79867713 | 79867505 | ID=Msa0575890-mRNA-1:exon:28525;Parent=Msa0575890-mRNA-1 |
| chr4_1 | exon | 79867858 | 79867937 | 79867858 | ID=Msa0575890-mRNA-1:exon:28526;Parent=Msa0575890-mRNA-1 |
| chr4_1 | exon | 79868037 | 79868129 | 79868037 | ID=Msa0575890-mRNA-1:exon:28527;Parent=Msa0575890-mRNA-1 |
| chr4_1 | exon | 79868256 | 79868414 | 79868256 | ID=Msa0575890-mRNA-1:exon:28528;Parent=Msa0575890-mRNA-1 |
| chr4_1 | exon | 79869141 | 79869760 | 79869141 | ID=Msa0575890-mRNA-1:exon:28529;Parent=Msa0575890-mRNA-1 |
| chr4_1 | five_prime_UTR | 79867505 | 79867619 | 79867505 | ID=Msa0575890-mRNA-1:five_prime_utr;Parent=Msa0575890-mRNA-1 |
| chr4_1 | CDS | 79867620 | 79867713 | 79867620 | ID=Msa0575890-mRNA-1:cds;Parent=Msa0575890-mRNA-1 |
| chr4_1 | CDS | 79867858 | 79867937 | 79867858 | ID=Msa0575890-mRNA-1:cds;Parent=Msa0575890-mRNA-1 |
| chr4_1 | CDS | 79868037 | 79868129 | 79868037 | ID=Msa0575890-mRNA-1:cds;Parent=Msa0575890-mRNA-1 |
| chr4_1 | CDS | 79868256 | 79868414 | 79868256 | ID=Msa0575890-mRNA-1:cds;Parent=Msa0575890-mRNA-1 |
| chr4_1 | CDS | 79869141 | 79869215 | 79869141 | ID=Msa0575890-mRNA-1:cds;Parent=Msa0575890-mRNA-1 |
| chr4_1 | three_prime_UTR | 79869216 | 79869760 | 79869216 | ID=Msa0575890-mRNA-1:three_prime_utr;Parent=Msa0575890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
