AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1181730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181730 MtrunA17_Chr8g0337371 98.258 287 5 0 1 287 551 837 0.0 577
Msa1181730 MtrunA17_Chr8g0337371 93.594 281 18 0 1 281 104 384 0.0 542
Msa1181730 MtrunA17_Chr8g0337361 89.236 288 30 1 1 287 115 402 0.0 535
Msa1181730 MtrunA17_Chr8g0337481 82.847 274 46 1 15 287 12 285 8.08e-172 476
Msa1181730 MtrunA17_Chr8g0337491 85.768 267 37 1 21 286 88 354 1.66e-171 481
Msa1181730 MtrunA17_Chr8g0337451 81.724 290 50 2 1 287 55 344 4.37e-171 477
Msa1181730 MtrunA17_Chr8g0337471 79.655 290 55 3 1 287 56 344 7.01e-171 476
Msa1181730 MtrunA17_Chr4g0043061 67.931 290 90 2 1 287 61 350 1.27e-141 402
Msa1181730 MtrunA17_Chr7g0214831 61.938 289 108 2 1 287 58 346 6.06e-127 365
Msa1181730 MtrunA17_Chr8g0335881 89.571 163 16 1 1 162 56 218 9.93e-105 304
Msa1181730 MtrunA17_Chr2g0307121 50.183 273 135 1 16 287 74 346 3.08e-97 289
Msa1181730 MtrunA17_Chr2g0322531 44.776 268 143 4 22 284 80 347 4.98e-72 225
Msa1181730 MtrunA17_Chr2g0322551 45.528 246 129 4 22 262 81 326 5.59e-68 215
Msa1181730 MtrunA17_Chr2g0322541 42.798 243 134 4 25 262 84 326 4.76e-62 201
Msa1181730 MtrunA17_Chr5g0445921 58.594 128 53 0 158 285 9 136 6.67e-52 166
Msa1181730 MtrunA17_Chr4g0045061 37.321 209 123 4 82 284 416 622 3.64e-28 113
Msa1181730 MtrunA17_Chr4g0045041 33.610 241 148 7 50 284 388 622 7.54e-28 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1181730 AT5G16970.1 71.918 292 77 3 1 287 54 345 1.93e-153 432
Msa1181730 AT3G03080.1 72.852 291 75 3 1 287 60 350 1.97e-153 432
Msa1181730 AT5G17000.1 71.575 292 78 4 1 287 54 345 2.86e-151 427
Msa1181730 AT5G16990.1 71.478 291 79 4 1 287 53 343 5.01e-150 424
Msa1181730 AT1G26320.1 69.863 292 83 2 1 287 60 351 2.76e-148 419
Msa1181730 AT5G37980.1 70.909 275 78 2 15 287 79 353 1.21e-145 413
Msa1181730 AT1G26320.2 68.493 292 82 3 1 287 60 346 8.26e-144 408
Msa1181730 AT5G37940.1 69.818 275 81 2 15 287 79 353 9.86e-144 408
Msa1181730 AT5G16960.2 68.276 290 87 3 1 285 55 344 5.42e-143 406
Msa1181730 AT5G16960.1 68.276 290 87 3 1 285 55 344 5.42e-143 406
Msa1181730 AT5G38000.1 68.864 273 83 2 15 285 79 351 9.11e-140 398
Msa1181730 AT5G38000.3 67.286 269 83 3 15 278 79 347 2.49e-133 382
Msa1181730 AT3G59845.1 64.706 289 98 2 1 285 58 346 2.85e-133 381
Msa1181730 AT5G16980.1 77.434 226 51 0 62 287 14 239 8.47e-130 368
Msa1181730 AT5G16980.3 77.434 226 51 0 62 287 14 239 8.47e-130 368
Msa1181730 AT5G16980.2 77.434 226 51 0 62 287 80 305 4.43e-129 369
Msa1181730 AT5G38000.2 64.103 273 77 3 15 285 79 332 5.14e-124 357
Msa1181730 AT3G59845.2 68.443 244 76 1 43 285 1 244 9.72e-121 345
Msa1181730 AT1G65560.1 57.877 292 118 2 1 287 59 350 9.67e-116 337
Msa1181730 AT1G65560.2 60.148 271 103 2 22 287 4 274 3.39e-115 333
Msa1181730 AT5G17000.2 72.024 168 42 4 1 163 54 221 3.07e-81 245
Msa1181730 AT1G49670.1 36.364 209 125 5 82 284 412 618 6.50e-27 110
Msa1181730 AT1G49670.2 36.453 203 121 5 88 284 441 641 1.41e-25 106
Msa1181730 AT5G37960.1 56.000 75 33 0 208 282 27 101 1.01e-20 85.5

Find 88 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTTTGGAGTCTTACTAAA+TGG 0.232605 8_1:+16252408 Msa1181730:CDS
TAAACATTCTCTCCTTTCTT+AGG 0.243536 8_1:-16252671 None:intergenic
TCCTATTATACTGGAATTCT+TGG 0.259196 8_1:+16252494 Msa1181730:CDS
ACCTGAAGGTGTCACAAATT+TGG 0.261566 8_1:+16253535 Msa1181730:CDS
ATGTTCATGTCTGATTCTTT+AGG 0.265462 8_1:-16252021 None:intergenic
GCCAAATTTGTGACACCTTC+AGG 0.288617 8_1:-16253536 None:intergenic
AAGTAAATGTCAATGCCTTC+TGG 0.290715 8_1:-16253410 None:intergenic
TCACCTTTATACAAAATTCT+TGG 0.290796 8_1:+16253613 Msa1181730:CDS
AAATCATCTTTCTTATAATC+TGG 0.299191 8_1:-16252386 None:intergenic
CTTGTGTATGAAGCAATCTT+TGG 0.301442 8_1:+16253848 Msa1181730:three_prime_UTR
GTCCCACTTTCCTATTATAC+TGG 0.312861 8_1:+16252485 Msa1181730:CDS
TGTGAGATCATTCCACTTAC+AGG 0.322522 8_1:-16253497 None:intergenic
AATATCAAGGCTATAAATAA+TGG 0.336127 8_1:+16249137 None:intergenic
ATAAGAAAGATGATTTAGTT+TGG 0.338960 8_1:+16252393 Msa1181730:CDS
ACATTTACTTTGAGAATGTT+GGG 0.344583 8_1:+16253423 Msa1181730:CDS
CAGTAGTGTCCTTGGTCATC+AGG 0.350101 8_1:-16252145 None:intergenic
TTGCAGCCACTGACAGGCTT+TGG 0.351353 8_1:+16252335 Msa1181730:intron
GTTTATGTTTCTGCTGCATC+TGG 0.358562 8_1:+16252689 Msa1181730:CDS
ACCAAGAATTCCAGTATAAT+AGG 0.375084 8_1:-16252495 None:intergenic
ACCTCAATGCAGCTTTAAAA+AGG 0.376014 8_1:+16253109 Msa1181730:CDS
TATGCCGGTTTCTTTGAATT+AGG 0.385175 8_1:+16252644 Msa1181730:CDS
TATAGTTTGGTTCCTACAAC+TGG 0.385625 8_1:+16252437 Msa1181730:CDS
ACCTTTCCTTCTCTTATAAG+AGG 0.391934 8_1:-16253647 None:intergenic
GGTGCTGTTGGTCAACTTGT+AGG 0.393880 8_1:+16252710 Msa1181730:CDS
TTTAAAGCTGCATTGAGGTC+TGG 0.396923 8_1:-16253105 None:intergenic
AATGGTCCTGCTGCATTGAT+TGG 0.402266 8_1:+16253704 Msa1181730:CDS
GTATCTAAAGTTGTAGAATC+TGG 0.408050 8_1:+16252359 Msa1181730:CDS
CCGGCATATGCAGTCATTCC+CGG 0.416666 8_1:-16252629 None:intergenic
TAAATGGGAAGAGTATAGTT+TGG 0.417552 8_1:+16252424 Msa1181730:CDS
GACATTTACTTTGAGAATGT+TGG 0.417924 8_1:+16253422 Msa1181730:CDS
AAATCATATATAAGCGGATT+CGG 0.423759 8_1:+16253561 Msa1181730:CDS
TGTTATGTTGTTGGAAGTGC+TGG 0.423888 8_1:+16252755 Msa1181730:CDS
GGACTTGGTGCTCTCACCCC+TGG 0.424238 8_1:+16252170 Msa1181730:CDS
TTGTGGAAGGTTGAGAGTTA+TGG 0.428054 8_1:-16252055 None:intergenic
CAACATTGCGACCACTGTAT+AGG 0.431334 8_1:-16253727 None:intergenic
AAAGAATGTGTATATCATAA+AGG 0.437563 8_1:-16254027 None:intergenic
CTGCATGGTTGTTATGTTGT+TGG 0.438226 8_1:+16252746 Msa1181730:CDS
TTCCTTCTCTTATAAGAGGC+AGG 0.439768 8_1:-16253643 None:intergenic
ATTCTAAAGGACTATGTGTC+TGG 0.456623 8_1:+16251994 Msa1181730:five_prime_UTR
AGAAGGAAAGGTTGTGTATG+TGG 0.461025 8_1:+16253658 Msa1181730:CDS
AGTTTGGAGTCTTACTAAAT+GGG 0.465554 8_1:+16252409 Msa1181730:CDS
TCTGCTGCATCTGGTGCTGT+TGG 0.470418 8_1:+16252698 Msa1181730:CDS
CAGGAGTCTCATCTCATGTA+AGG 0.471032 8_1:-16252126 None:intergenic
TTGTTTGAGTACAGGTATGC+CGG 0.481096 8_1:+16252610 Msa1181730:intron
ACTGCCTAATTCAAAGAAAC+CGG 0.485002 8_1:-16252648 None:intergenic
GAGTAATTGCAGCCACTGAC+AGG 0.490838 8_1:+16252329 Msa1181730:intron
ATTCCAGTATAATAGGAAAG+TGG 0.506284 8_1:-16252488 None:intergenic
AGAGCATGGCTTACAGAACC+AGG 0.506477 8_1:-16252188 None:intergenic
AAGTGCTGGTACTAAAGAAA+AGG 0.512574 8_1:+16252769 Msa1181730:CDS
CTATACAGTGGTCGCAATGT+TGG 0.518357 8_1:+16253728 Msa1181730:CDS
AGTGAGTCATCAAAAGTATG+AGG 0.524215 8_1:-16253955 None:intergenic
AAGGACACTACTGCAGGACT+TGG 0.525666 8_1:+16252155 Msa1181730:CDS
TTTGAGCAGAACAACATCGT+TGG 0.527186 8_1:-16252082 None:intergenic
GTCCTGCCTCTTATAAGAGA+AGG 0.533643 8_1:+16253641 Msa1181730:CDS
GAATTAGGCAGTCCTAAGAA+AGG 0.538058 8_1:+16252659 Msa1181730:CDS
AAGTCCTGCAGTAGTGTCCT+TGG 0.538129 8_1:-16252153 None:intergenic
ATAGCTGAGGGTCTTGAGAA+TGG 0.538619 8_1:+16253686 Msa1181730:CDS
ATGAATGAATGCATATACTT+TGG 0.541541 8_1:+16253778 Msa1181730:exon
CATGGTCGCATACCTGTAAG+TGG 0.550433 8_1:+16253485 Msa1181730:CDS
TTCCAGTATAATAGGAAAGT+GGG 0.557235 8_1:-16252487 None:intergenic
TATAGGCCAATCAATGCAGC+AGG 0.558750 8_1:-16253710 None:intergenic
CATTTACTTTGAGAATGTTG+GGG 0.558888 8_1:+16253424 Msa1181730:CDS
CCGGGAATGACTGCATATGC+CGG 0.559406 8_1:+16252629 Msa1181730:CDS
ATATAAGCGGATTCGGATCG+AGG 0.562832 8_1:+16253568 Msa1181730:CDS
GCCTCTTATAAGAGAAGGAA+AGG 0.563797 8_1:+16253646 Msa1181730:CDS
GAACAAGCAAGTGATTCTAA+AGG 0.564959 8_1:+16251981 Msa1181730:five_prime_UTR
TGTTTGAGTACAGGTATGCC+GGG 0.570748 8_1:+16252611 Msa1181730:intron
CACTTACAGGTATGCGACCA+TGG 0.572085 8_1:-16253484 None:intergenic
TTCCTGAGATGGCGGAAGTG+AGG 0.583404 8_1:+16251959 Msa1181730:intron
TAAATTAGGTACTTTCCAGA+AGG 0.591735 8_1:+16253395 Msa1181730:intron
ATGACCAAGGACACTACTGC+AGG 0.602197 8_1:+16252149 Msa1181730:CDS
ACAACATCGTTGGAACCTTG+TGG 0.607045 8_1:-16252072 None:intergenic
TATAAGCGGATTCGGATCGA+GGG 0.614787 8_1:+16253569 Msa1181730:CDS
TGGCACAAATCATATATAAG+CGG 0.616296 8_1:+16253555 Msa1181730:CDS
GATACTCCAAAGCCTGTCAG+TGG 0.639959 8_1:-16252341 None:intergenic
CATCGTTGGAACCTTGTGGA+AGG 0.641666 8_1:-16252068 None:intergenic
TACAATCTTACTCAACCTGA+AGG 0.650544 8_1:+16253521 Msa1181730:CDS
GGTCAATTTGCAAAACTGCA+TGG 0.653462 8_1:+16252731 Msa1181730:CDS
TGACACAATTCCTGAGATGG+CGG 0.653628 8_1:+16251951 Msa1181730:intron
GAGCATGGCTTACAGAACCA+GGG 0.660009 8_1:-16252187 None:intergenic
ATTTACTTTGAGAATGTTGG+GGG 0.663382 8_1:+16253425 Msa1181730:CDS
AGCATGGCTTACAGAACCAG+GGG 0.671942 8_1:-16252186 None:intergenic
ATAACTCTCAACCTTCCACA+AGG 0.682324 8_1:+16252057 Msa1181730:five_prime_UTR
GATGAGACTCCTGATGACCA+AGG 0.705862 8_1:+16252136 Msa1181730:exon
TCGCAATGTTGGTAAACAAG+TGG 0.707437 8_1:+16253739 Msa1181730:CDS
GCATTGATTGGCCTATACAG+TGG 0.725348 8_1:+16253716 Msa1181730:CDS
GTATGTGGAAGACATAGCTG+AGG 0.744288 8_1:+16253673 Msa1181730:CDS
TATGTGGAAGACATAGCTGA+GGG 0.752621 8_1:+16253674 Msa1181730:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGTTTAAATTTTTTAACAA+GGG - chr8_1:16251375-16251394 None:intergenic 10.0%
!!! AAAGTTTAAATTTTTTAACA+AGG - chr8_1:16251376-16251395 None:intergenic 10.0%
!!! ACATTTTATTATTCATTCTA+CGG + chr8_1:16249923-16249942 Msa1181730:intron 15.0%
!! TATTCATTTAGTATAATTAC+AGG - chr8_1:16250075-16250094 None:intergenic 15.0%
!!! GATTTGTTGAAAAATAAATT+TGG + chr8_1:16250115-16250134 Msa1181730:intron 15.0%
!!! TCACTATTTTTATTTGATTT+AGG + chr8_1:16251078-16251097 Msa1181730:intron 15.0%
!! AAATGATTTAGAAAAAACAA+CGG + chr8_1:16251147-16251166 Msa1181730:intron 15.0%
!! TTGTAAATGACAAATAAAAA+TGG + chr8_1:16251185-16251204 Msa1181730:intron 15.0%
!! AAATAAATTAACTTAAAAGC+AGG + chr8_1:16251462-16251481 Msa1181730:intron 15.0%
!! AATAAATTAACTTAAAAGCA+GGG + chr8_1:16251463-16251482 Msa1181730:intron 15.0%
!!! ATCTATGATTTATTTTCTTA+TGG - chr8_1:16251771-16251790 None:intergenic 15.0%
!! TCATTACTTGAAATTAAATT+AGG + chr8_1:16251817-16251836 Msa1181730:intron 15.0%
!!! AATTAAATTAGGAACAATTT+TGG + chr8_1:16251828-16251847 Msa1181730:intron 15.0%
!!! AAAAATACTATTTTCAAGTT+TGG + chr8_1:16252978-16252997 Msa1181730:intron 15.0%
!! GATATCAATTTATGTAAATT+AGG + chr8_1:16253381-16253400 Msa1181730:intron 15.0%
!! AAAGTTAGTTATAATGTGTA+AGG - chr8_1:16249290-16249309 None:intergenic 20.0%
!!! ACTTCATTATAGTTACTTTA+TGG - chr8_1:16249332-16249351 None:intergenic 20.0%
!! TTAGTATAATTACAGGATAA+TGG - chr8_1:16250068-16250087 None:intergenic 20.0%
!!! GTTTGTTTTTAACACTTTTA+TGG + chr8_1:16250195-16250214 Msa1181730:intron 20.0%
!! TCATCTTTATACAAAATTCT+TGG + chr8_1:16250707-16250726 Msa1181730:intron 20.0%
!! AACACATAAATATCCTTAAA+AGG - chr8_1:16251120-16251139 None:intergenic 20.0%
!!! AAGTTTAATATCACAACTTT+TGG - chr8_1:16251490-16251509 None:intergenic 20.0%
!! CTTAACTTCATATAAGTATT+TGG + chr8_1:16251644-16251663 Msa1181730:intron 20.0%
!! TCTAGATTTGTATGTAAATT+TGG + chr8_1:16251737-16251756 Msa1181730:intron 20.0%
!! AAATCATCTTTCTTATAATC+TGG - chr8_1:16252389-16252408 None:intergenic 20.0%
!! ATAAGAAAGATGATTTAGTT+TGG + chr8_1:16252393-16252412 Msa1181730:CDS 20.0%
!! TGTTAAAAAACACAACAAAA+TGG - chr8_1:16252578-16252597 None:intergenic 20.0%
!!! TAATCATTGGTTTTTTCTTA+GGG - chr8_1:16252851-16252870 None:intergenic 20.0%
!!! ATAATCATTGGTTTTTTCTT+AGG - chr8_1:16252852-16252871 None:intergenic 20.0%
!! ACAGTAGAATAAATAATCAT+TGG - chr8_1:16252864-16252883 None:intergenic 20.0%
!! ATATTAAATGAACTGAATTG+TGG + chr8_1:16253017-16253036 Msa1181730:intron 20.0%
!!! GATCTTTTGAAGAATAAATT+TGG + chr8_1:16253051-16253070 Msa1181730:CDS 20.0%
!! AGGAGAAATTACTCTAAAAA+GGG - chr8_1:16249240-16249259 None:intergenic 25.0%
!! AAGGAGAAATTACTCTAAAA+AGG - chr8_1:16249241-16249260 None:intergenic 25.0%
! AAATCGTCTTTCTTATAATC+TGG - chr8_1:16249471-16249490 None:intergenic 25.0%
! ATAAGAAAGACGATTTAGTT+TGG + chr8_1:16249475-16249494 Msa1181730:intron 25.0%
!! TAAGAAAGACGATTTAGTTT+GGG + chr8_1:16249476-16249495 Msa1181730:intron 25.0%
! TAATGGTTGTAATTATGTAC+AGG - chr8_1:16250051-16250070 None:intergenic 25.0%
! CATACACACGAATAATAATT+TGG - chr8_1:16250382-16250401 None:intergenic 25.0%
! TATTATTCGTGTGTATGTAT+CGG + chr8_1:16250385-16250404 Msa1181730:intron 25.0%
! GATAATTACAATCAACAGAA+TGG - chr8_1:16250997-16251016 None:intergenic 25.0%
!!! TAGTTTTGATCCTCATATTT+TGG + chr8_1:16251050-16251069 Msa1181730:intron 25.0%
!! AAAACAAACACATCCTTTTA+AGG + chr8_1:16251104-16251123 Msa1181730:intron 25.0%
!!! ATTTTTAAGTACCGAAAACA+TGG + chr8_1:16251330-16251349 Msa1181730:intron 25.0%
!! AATACGAATTTCCATGTTTT+CGG - chr8_1:16251344-16251363 None:intergenic 25.0%
!! TTTTGATGAACCAAAAATCA+AGG + chr8_1:16251508-16251527 Msa1181730:intron 25.0%
!!! TGCGTGAATAACTTTTTTAA+GGG - chr8_1:16251588-16251607 None:intergenic 25.0%
!!! TTGCGTGAATAACTTTTTTA+AGG - chr8_1:16251589-16251608 None:intergenic 25.0%
! CATATGCAAATTAACCAAAA+TGG - chr8_1:16251700-16251719 None:intergenic 25.0%
!!! TGATGATTCATTATTTTTGC+AGG - chr8_1:16252823-16252842 None:intergenic 25.0%
!!! AATCATTGGTTTTTTCTTAG+GGG - chr8_1:16252850-16252869 None:intergenic 25.0%
!! ACATTTACTTTGAGAATGTT+GGG + chr8_1:16253423-16253442 Msa1181730:CDS 25.0%
!! AAATCATATATAAGCGGATT+CGG + chr8_1:16253561-16253580 Msa1181730:CDS 25.0%
! TCACCTTTATACAAAATTCT+TGG + chr8_1:16253613-16253632 Msa1181730:CDS 25.0%
!! ACTCCAAGAATTTTGTATAA+AGG - chr8_1:16250713-16250732 None:intergenic 25.0%
! ATGAATGAATGCATATACTT+TGG + chr8_1:16253778-16253797 Msa1181730:exon 25.0%
!! TATAGTTACAGTTTGTTGAC+TGG + chr8_1:16249352-16249371 Msa1181730:intron 30.0%
!! AAGAAAGACGATTTAGTTTG+GGG + chr8_1:16249477-16249496 Msa1181730:intron 30.0%
! TAAATGGGAAGAGTATAGTT+TGG + chr8_1:16249506-16249525 Msa1181730:intron 30.0%
TGAAATGTATTTCAGTTGCA+GGG - chr8_1:16249533-16249552 None:intergenic 30.0%
TTGAAATGTATTTCAGTTGC+AGG - chr8_1:16249534-16249553 None:intergenic 30.0%
!!! TATGCTGGTTTTTTTGAAGT+AGG + chr8_1:16249717-16249736 Msa1181730:intron 30.0%
!! TGTTGATTCATCATTTATGC+AGG - chr8_1:16249900-16249919 None:intergenic 30.0%
AAATCAAACTAGCAAAGACT+TGG - chr8_1:16249996-16250015 None:intergenic 30.0%
GAATATAATTATGACACACC+AGG + chr8_1:16250090-16250109 Msa1181730:intron 30.0%
!! TATTTTTCAACAAATCCACC+TGG - chr8_1:16250111-16250130 None:intergenic 30.0%
TGGTTCTTCTTTGTAGTTAA+AGG - chr8_1:16250152-16250171 None:intergenic 30.0%
ATGCTTCATAGATAGTTACT+TGG + chr8_1:16250425-16250444 Msa1181730:intron 30.0%
TAAACTAGATACTTTCCAGA+AGG + chr8_1:16250489-16250508 Msa1181730:intron 30.0%
TCTTGAATATGAAACTCCAT+GGG + chr8_1:16250562-16250581 Msa1181730:intron 30.0%
! ATATCATGTATAAGCGGATT+CGG + chr8_1:16250655-16250674 Msa1181730:intron 30.0%
! TCAAAATGTTGGTAAACAAG+TGG + chr8_1:16250833-16250852 Msa1181730:intron 30.0%
! TTTCTTCGAACCTTGATTTT+TGG - chr8_1:16251521-16251540 None:intergenic 30.0%
TAAGGGGTAAAAATATGCTT+TGG - chr8_1:16251571-16251590 None:intergenic 30.0%
!!! GCGTGAATAACTTTTTTAAG+GGG - chr8_1:16251587-16251606 None:intergenic 30.0%
TTGTGTCACAAAAATCTTTG+TGG - chr8_1:16251939-16251958 None:intergenic 30.0%
ATGTTCATGTCTGATTCTTT+AGG - chr8_1:16252024-16252043 None:intergenic 30.0%
AACATAGTTGCAATTGATCA+AGG + chr8_1:16252248-16252267 Msa1181730:intron 30.0%
! GTATCTAAAGTTGTAGAATC+TGG + chr8_1:16252359-16252378 Msa1181730:CDS 30.0%
! TAGTTTGGAGTCTTACTAAA+TGG + chr8_1:16252408-16252427 Msa1181730:CDS 30.0%
! AGTTTGGAGTCTTACTAAAT+GGG + chr8_1:16252409-16252428 Msa1181730:CDS 30.0%
! TAAATGGGAAGAGTATAGTT+TGG + chr8_1:16249506-16249525 Msa1181730:intron 30.0%
! ATTTTGAACATTCCAGTTGT+AGG - chr8_1:16252452-16252471 None:intergenic 30.0%
TTCCAGTATAATAGGAAAGT+GGG - chr8_1:16252490-16252509 None:intergenic 30.0%
ATTCCAGTATAATAGGAAAG+TGG - chr8_1:16252491-16252510 None:intergenic 30.0%
TCCTATTATACTGGAATTCT+TGG + chr8_1:16252494-16252513 Msa1181730:CDS 30.0%
ACCAAGAATTCCAGTATAAT+AGG - chr8_1:16252498-16252517 None:intergenic 30.0%
TAAACATTCTCTCCTTTCTT+AGG - chr8_1:16252674-16252693 None:intergenic 30.0%
!!! GGATTTTGGTTATTGCAATT+AGG - chr8_1:16252912-16252931 None:intergenic 30.0%
!!! TTTTCAAGTTTGGAAGTCTT+TGG + chr8_1:16252988-16253007 Msa1181730:intron 30.0%
TAAATTAGGTACTTTCCAGA+AGG + chr8_1:16253395-16253414 Msa1181730:intron 30.0%
! GACATTTACTTTGAGAATGT+TGG + chr8_1:16253422-16253441 Msa1181730:CDS 30.0%
! CATTTACTTTGAGAATGTTG+GGG + chr8_1:16253424-16253443 Msa1181730:CDS 30.0%
! ATTTACTTTGAGAATGTTGG+GGG + chr8_1:16253425-16253444 Msa1181730:CDS 30.0%
TGGCACAAATCATATATAAG+CGG + chr8_1:16253555-16253574 Msa1181730:CDS 30.0%
GATAATTACAATCAACAGAG+TGG - chr8_1:16253897-16253916 None:intergenic 30.0%
AGTAATTTCTCCTTACCTGT+AGG + chr8_1:16249247-16249266 Msa1181730:intron 35.0%
!! GGACCAATATGTCACTTTAA+CGG + chr8_1:16249373-16249392 Msa1181730:intron 35.0%
TAGTTTGGGGAATGACTAAA+TGG + chr8_1:16249490-16249509 Msa1181730:intron 35.0%
AGTTTGGGGAATGACTAAAT+GGG + chr8_1:16249491-16249510 Msa1181730:intron 35.0%
ATTCCAGTATAGTAGGAAAG+CGG - chr8_1:16249576-16249595 None:intergenic 35.0%
TCCTACTATACTGGAATTCT+CGG + chr8_1:16249579-16249598 Msa1181730:intron 35.0%
!!! GTTGTGTTTTGTTTGAGTAC+AGG + chr8_1:16249675-16249694 Msa1181730:intron 35.0%
AAAACTGTCTCTCCTTTCTT+AGG - chr8_1:16249747-16249766 None:intergenic 35.0%
AACCATGCAATTTGGCAAAT+TGG - chr8_1:16249809-16249828 None:intergenic 35.0%
AACATAGCAACCATGCAATT+TGG - chr8_1:16249817-16249836 None:intergenic 35.0%
! GGATAGTGGTTATTGTAGTT+AGG - chr8_1:16249975-16249994 None:intergenic 35.0%
TATAATTATGACACACCAGG+TGG + chr8_1:16250093-16250112 Msa1181730:intron 35.0%
GAATATAGAGTGTAGATGCT+AGG - chr8_1:16250266-16250285 None:intergenic 35.0%
GCATCTACACTCTATATTCA+AGG + chr8_1:16250267-16250286 Msa1181730:intron 35.0%
TGAGACACACTAATAACTAG+CGG + chr8_1:16250453-16250472 Msa1181730:intron 35.0%
! GACATTTACTTTGAGAACGT+TGG + chr8_1:16250516-16250535 Msa1181730:intron 35.0%
! ATTTACTTTGAGAACGTTGG+AGG + chr8_1:16250519-16250538 Msa1181730:intron 35.0%
CTCTTGAATATGAAACTCCA+TGG + chr8_1:16250561-16250580 Msa1181730:intron 35.0%
TGGCACATATCATGTATAAG+CGG + chr8_1:16250649-16250668 Msa1181730:intron 35.0%
GTCTTGTCTCTTATAAGAGA+AGG + chr8_1:16250735-16250754 Msa1181730:intron 35.0%
GTCTCTTATAAGAGAAGGAA+AGG + chr8_1:16250740-16250759 Msa1181730:intron 35.0%
CTGTTTAGTGGTCAAAATGT+TGG + chr8_1:16250822-16250841 Msa1181730:intron 35.0%
CTCATGAGTGAAAGAATGAA+TGG + chr8_1:16250865-16250884 Msa1181730:intron 35.0%
AAGAATGAATGGAGATGCTT+TGG + chr8_1:16250876-16250895 Msa1181730:intron 35.0%
TGTGTTTAGTTACTTGTGCA+TGG + chr8_1:16250936-16250955 Msa1181730:intron 35.0%
AATCAACAGAATGGATGAAG+AGG - chr8_1:16250988-16251007 None:intergenic 35.0%
AGTGAATCAGCCAAAATATG+AGG - chr8_1:16251063-16251082 None:intergenic 35.0%
!!! TCGTGTCATTTTTGCCATTT+TGG + chr8_1:16251683-16251702 Msa1181730:intron 35.0%
TAAATGTACAGACCAATGTG+TGG + chr8_1:16251878-16251897 Msa1181730:intron 35.0%
ACATGTACATCTAGTACAAC+TGG - chr8_1:16251904-16251923 None:intergenic 35.0%
GAACAAGCAAGTGATTCTAA+AGG + chr8_1:16251981-16252000 Msa1181730:five_prime_UTR 35.0%
! ATTCTAAAGGACTATGTGTC+TGG + chr8_1:16251994-16252013 Msa1181730:five_prime_UTR 35.0%
AATTGATGAAAGAGAGAGCA+TGG - chr8_1:16252205-16252224 None:intergenic 35.0%
! TATAGTTTGGTTCCTACAAC+TGG + chr8_1:16252437-16252456 Msa1181730:CDS 35.0%
!! TTACGCTTTTGTTTGAGTAC+AGG + chr8_1:16252602-16252621 Msa1181730:intron 35.0%
!! TATGCCGGTTTCTTTGAATT+AGG + chr8_1:16252644-16252663 Msa1181730:CDS 35.0%
ACTGCCTAATTCAAAGAAAC+CGG - chr8_1:16252651-16252670 None:intergenic 35.0%
!! AAGTGCTGGTACTAAAGAAA+AGG + chr8_1:16252769-16252788 Msa1181730:CDS 35.0%
! GTGAACAAAGACATGGATTT+TGG - chr8_1:16252926-16252945 None:intergenic 35.0%
AATCCATGTCTTTGTTCACT+TGG + chr8_1:16252927-16252946 Msa1181730:intron 35.0%
!! ACCTCAATGCAGCTTTAAAA+AGG + chr8_1:16253109-16253128 Msa1181730:CDS 35.0%
!!! ACCTTTTTAAAGCTGCATTG+AGG - chr8_1:16253113-16253132 None:intergenic 35.0%
TGTAGTTACCTATGTAGCAT+CGG + chr8_1:16253177-16253196 Msa1181730:intron 35.0%
ATAACACTGATACATGGACA+CGG - chr8_1:16253286-16253305 None:intergenic 35.0%
TGTCCATGTATCAGTGTTAT+CGG + chr8_1:16253286-16253305 Msa1181730:intron 35.0%
AAGTAAATGTCAATGCCTTC+TGG - chr8_1:16253413-16253432 None:intergenic 35.0%
TACAATCTTACTCAACCTGA+AGG + chr8_1:16253521-16253540 Msa1181730:CDS 35.0%
ACCTTTCCTTCTCTTATAAG+AGG - chr8_1:16250744-16250763 None:intergenic 35.0%
CTTGTGTATGAAGCAATCTT+TGG + chr8_1:16253848-16253867 Msa1181730:three_prime_UTR 35.0%
TGTATGAAGCAATCTTTGGA+TGG + chr8_1:16253852-16253871 Msa1181730:intron 35.0%
AATTACAATCAACAGAGTGG+AGG - chr8_1:16253894-16253913 None:intergenic 35.0%
! AGTGAGTCATCAAAAGTATG+AGG - chr8_1:16253958-16253977 None:intergenic 35.0%
! TTTGATGGTACCTACAGGTA+AGG - chr8_1:16249260-16249279 None:intergenic 40.0%
CTGCCGTTAAAGTGACATAT+TGG - chr8_1:16249379-16249398 None:intergenic 40.0%
! GTGTCTAAAGTTGTAGACTC+TGG + chr8_1:16249441-16249460 Msa1181730:intron 40.0%
TTCCAGTATAGTAGGAAAGC+GGG - chr8_1:16249575-16249594 None:intergenic 40.0%
ACCGAGAATTCCAGTATAGT+AGG - chr8_1:16249583-16249602 None:intergenic 40.0%
TCTCATGTGTCACAACGAAA+TGG - chr8_1:16249652-16249671 None:intergenic 40.0%
!! GTTTTTGTTTCATCTGCCTC+TGG + chr8_1:16249762-16249781 Msa1181730:intron 40.0%
TTGCATGGTTGCTATGTTGT+TGG + chr8_1:16249819-16249838 Msa1181730:intron 40.0%
!! AAGTGCTGGAAGTAAAGAGA+AGG + chr8_1:16249842-16249861 Msa1181730:intron 40.0%
ACTAGCAAAGACTTGGATAG+TGG - chr8_1:16249989-16250008 None:intergenic 40.0%
!! ACCTCAATGCAGCTTTGAAA+AGG + chr8_1:16250173-16250192 Msa1181730:intron 40.0%
! ACCTTTTCAAAGCTGCATTG+AGG - chr8_1:16250177-16250196 None:intergenic 40.0%
CACAAGTGACATTGTTGTGT+TGG - chr8_1:16250338-16250357 None:intergenic 40.0%
AAGTAAATGTCGATGCCTTC+TGG - chr8_1:16250507-16250526 None:intergenic 40.0%
TACAATCGTACTCAACCTGA+AGG + chr8_1:16250615-16250634 Msa1181730:intron 40.0%
!! ACCTGAAGGTGTCACAAATT+TGG + chr8_1:16250629-16250648 Msa1181730:intron 40.0%
AGAAGGAAAGGTTGTGTATG+TGG + chr8_1:16250752-16250771 Msa1181730:intron 40.0%
TATGTGGAAGACATAGCTGA+GGG + chr8_1:16250768-16250787 Msa1181730:intron 40.0%
ATGGATGAAGAGGTTTCCAA+AGG - chr8_1:16250978-16250997 None:intergenic 40.0%
TTGTGACACAATTCCTGAGA+TGG + chr8_1:16251948-16251967 Msa1181730:intron 40.0%
TTGTGGAAGGTTGAGAGTTA+TGG - chr8_1:16252058-16252077 None:intergenic 40.0%
ATAACTCTCAACCTTCCACA+AGG + chr8_1:16252057-16252076 Msa1181730:five_prime_UTR 40.0%
TTTGAGCAGAACAACATCGT+TGG - chr8_1:16252085-16252104 None:intergenic 40.0%
GTCCCACTTTCCTATTATAC+TGG + chr8_1:16252485-16252504 Msa1181730:CDS 40.0%
TTGTTTGAGTACAGGTATGC+CGG + chr8_1:16249683-16249702 Msa1181730:intron 40.0%
GAATTAGGCAGTCCTAAGAA+AGG + chr8_1:16252659-16252678 Msa1181730:CDS 40.0%
! GTTTATGTTTCTGCTGCATC+TGG + chr8_1:16252689-16252708 Msa1181730:CDS 40.0%
GGTCAATTTGCAAAACTGCA+TGG + chr8_1:16252731-16252750 Msa1181730:CDS 40.0%
CTGCATGGTTGTTATGTTGT+TGG + chr8_1:16252746-16252765 Msa1181730:CDS 40.0%
! TGTTATGTTGTTGGAAGTGC+TGG + chr8_1:16252755-16252774 Msa1181730:CDS 40.0%
TCACCAAGTGAACAAAGACA+TGG - chr8_1:16252933-16252952 None:intergenic 40.0%
! TTTAAAGCTGCATTGAGGTC+TGG - chr8_1:16253108-16253127 None:intergenic 40.0%
!! ATAAAGTGCCGATGCTACAT+AGG - chr8_1:16253188-16253207 None:intergenic 40.0%
! GCATCGGCACTTTATATTGA+AGG + chr8_1:16253193-16253212 Msa1181730:intron 40.0%
TAGAAGTGACTGTGTTGTGA+TGG - chr8_1:16253247-16253266 None:intergenic 40.0%
CATGGACACGGACAATAATT+TGG - chr8_1:16253274-16253293 None:intergenic 40.0%
CAACCGATAACACTGATACA+TGG - chr8_1:16253292-16253311 None:intergenic 40.0%
! CTTTTGAATATGCGAGTCCA+TGG + chr8_1:16253467-16253486 Msa1181730:CDS 40.0%
TGTGAGATCATTCCACTTAC+AGG - chr8_1:16253500-16253519 None:intergenic 40.0%
!! ACCTGAAGGTGTCACAAATT+TGG + chr8_1:16250629-16250648 Msa1181730:intron 40.0%
TTCCTTCTCTTATAAGAGGC+AGG - chr8_1:16253646-16253665 None:intergenic 40.0%
GCCTCTTATAAGAGAAGGAA+AGG + chr8_1:16253646-16253665 Msa1181730:CDS 40.0%
AGAAGGAAAGGTTGTGTATG+TGG + chr8_1:16250752-16250771 Msa1181730:intron 40.0%
TATGTGGAAGACATAGCTGA+GGG + chr8_1:16250768-16250787 Msa1181730:intron 40.0%
! TCGCAATGTTGGTAAACAAG+TGG + chr8_1:16253739-16253758 Msa1181730:CDS 40.0%
!! CCACTTTTGATGGTACCTAC+AGG - chr8_1:16249265-16249284 None:intergenic 45.0%
CCTGTAGGTACCATCAAAAG+TGG + chr8_1:16249262-16249281 Msa1181730:intron 45.0%
!!! GTGTAAGGTGCCACTTTTGA+TGG - chr8_1:16249275-16249294 None:intergenic 45.0%
GAGTAATTGCAGCCATTGAC+AGG + chr8_1:16249411-16249430 Msa1181730:intron 45.0%
TTGCAGCCATTGACAGGATT+AGG + chr8_1:16249417-16249436 Msa1181730:intron 45.0%
GACACTCCTAATCCTGTCAA+TGG - chr8_1:16249426-16249445 None:intergenic 45.0%
TGTTTGAGTACAGGTATGCC+AGG + chr8_1:16249684-16249703 Msa1181730:intron 45.0%
GAAGTAGGCTCTCCTAAGAA+AGG + chr8_1:16249732-16249751 Msa1181730:intron 45.0%
GGCCAATTTGCCAAATTGCA+TGG + chr8_1:16249804-16249823 Msa1181730:intron 45.0%
! TGCTATGTTGTTGGAAGTGC+TGG + chr8_1:16249828-16249847 Msa1181730:intron 45.0%
TTCAAAGCTGCATTGAGGTC+TGG - chr8_1:16250172-16250191 None:intergenic 45.0%
AAGGTGTGTCCAACACATGT+TGG + chr8_1:16250286-16250305 Msa1181730:intron 45.0%
TGTGAGATCATTCCACACAC+AGG - chr8_1:16250594-16250613 None:intergenic 45.0%
GCCAAATTTGTGACACCTTC+AGG - chr8_1:16250633-16250652 None:intergenic 45.0%
! CATGTATAAGCGGATTCGGA+TGG + chr8_1:16250659-16250678 Msa1181730:intron 45.0%
! TATAAGCGGATTCGGATGGA+AGG + chr8_1:16250663-16250682 Msa1181730:intron 45.0%
GTATGTGGAAGACATAGCTG+AGG + chr8_1:16250767-16250786 Msa1181730:intron 45.0%
ATAGCTGAGGGTCTTGAGAA+TGG + chr8_1:16250780-16250799 Msa1181730:intron 45.0%
!! GCTTTGGTTGGTCTGTTTAG+TGG + chr8_1:16250810-16250829 Msa1181730:intron 45.0%
AGCACTCTTTGGATGACCTT+TGG + chr8_1:16250959-16250978 Msa1181730:intron 45.0%
TAGTACAACTGGCCACACAT+TGG - chr8_1:16251893-16251912 None:intergenic 45.0%
TGACACAATTCCTGAGATGG+CGG + chr8_1:16251951-16251970 Msa1181730:intron 45.0%
ACAACATCGTTGGAACCTTG+TGG - chr8_1:16252075-16252094 None:intergenic 45.0%
CAGGAGTCTCATCTCATGTA+AGG - chr8_1:16252129-16252148 None:intergenic 45.0%
TGTTTGAGTACAGGTATGCC+GGG + chr8_1:16249684-16249703 Msa1181730:intron 45.0%
GAACTGAATTGTGGCACACT+AGG + chr8_1:16253026-16253045 Msa1181730:intron 45.0%
TGTCAGACAGCAACATGTGT+AGG - chr8_1:16253224-16253243 None:intergenic 45.0%
GCCAAATTTGTGACACCTTC+AGG - chr8_1:16250633-16250652 None:intergenic 45.0%
! ATATAAGCGGATTCGGATCG+AGG + chr8_1:16253568-16253587 Msa1181730:CDS 45.0%
! TATAAGCGGATTCGGATCGA+GGG + chr8_1:16253569-16253588 Msa1181730:CDS 45.0%
GTCCTGCCTCTTATAAGAGA+AGG + chr8_1:16253641-16253660 Msa1181730:CDS 45.0%
GTATGTGGAAGACATAGCTG+AGG + chr8_1:16250767-16250786 Msa1181730:intron 45.0%
ATAGCTGAGGGTCTTGAGAA+TGG + chr8_1:16250780-16250799 Msa1181730:intron 45.0%
! AATGGTCCTGCTGCATTGAT+TGG + chr8_1:16253704-16253723 Msa1181730:CDS 45.0%
TATAGGCCAATCAATGCAGC+AGG - chr8_1:16253713-16253732 None:intergenic 45.0%
!! GCATTGATTGGCCTATACAG+TGG + chr8_1:16253716-16253735 Msa1181730:CDS 45.0%
CAACATTGCGACCACTGTAT+AGG - chr8_1:16253730-16253749 None:intergenic 45.0%
CTATACAGTGGTCGCAATGT+TGG + chr8_1:16253728-16253747 Msa1181730:CDS 45.0%
AGCAATCTTTGGATGGCTCT+TGG + chr8_1:16253859-16253878 Msa1181730:intron 45.0%
AATCAACAGAGTGGAGGAAG+AGG - chr8_1:16253888-16253907 None:intergenic 45.0%
!!! AAAAATACTATTTTAAATTT+TGG + chr8_1:16250022-16250041 Msa1181730:intron 5.0%
GTCCCGCTTTCCTACTATAC+TGG + chr8_1:16249570-16249589 Msa1181730:intron 50.0%
CCAGCATAAGCAGTCATTCC+TGG - chr8_1:16249705-16249724 None:intergenic 50.0%
CCAGGAATGACTGCTTATGC+TGG + chr8_1:16249702-16249721 Msa1181730:intron 50.0%
AAGTTGACCAACAGCACCAG+AGG - chr8_1:16249781-16249800 None:intergenic 50.0%
!! GGTGCTGTTGGTCAACTTGT+TGG + chr8_1:16249783-16249802 Msa1181730:intron 50.0%
TGTCGGACACCAACATGTGT+TGG - chr8_1:16250298-16250317 None:intergenic 50.0%
! CGTGTGTATGTATCGGTGTC+AGG + chr8_1:16250392-16250411 Msa1181730:intron 50.0%
ACAGACCAACCAAAGCTGCA+GGG - chr8_1:16250806-16250825 None:intergenic 50.0%
AACAGACCAACCAAAGCTGC+AGG - chr8_1:16250807-16250826 None:intergenic 50.0%
! CTTGTGCATGGAGCACTCTT+TGG + chr8_1:16250948-16250967 Msa1181730:intron 50.0%
CATCGTTGGAACCTTGTGGA+AGG - chr8_1:16252071-16252090 None:intergenic 50.0%
GATGAGACTCCTGATGACCA+AGG + chr8_1:16252136-16252155 Msa1181730:exon 50.0%
CAGTAGTGTCCTTGGTCATC+AGG - chr8_1:16252148-16252167 None:intergenic 50.0%
ATGACCAAGGACACTACTGC+AGG + chr8_1:16252149-16252168 Msa1181730:CDS 50.0%
AAGTCCTGCAGTAGTGTCCT+TGG - chr8_1:16252156-16252175 None:intergenic 50.0%
AAGGACACTACTGCAGGACT+TGG + chr8_1:16252155-16252174 Msa1181730:CDS 50.0%
AGCATGGCTTACAGAACCAG+GGG - chr8_1:16252189-16252208 None:intergenic 50.0%
GAGCATGGCTTACAGAACCA+GGG - chr8_1:16252190-16252209 None:intergenic 50.0%
AGAGCATGGCTTACAGAACC+AGG - chr8_1:16252191-16252210 None:intergenic 50.0%
GAGTAATTGCAGCCACTGAC+AGG + chr8_1:16252329-16252348 Msa1181730:intron 50.0%
GATACTCCAAAGCCTGTCAG+TGG - chr8_1:16252344-16252363 None:intergenic 50.0%
!! GGTGCTGTTGGTCAACTTGT+AGG + chr8_1:16249783-16249802 Msa1181730:intron 50.0%
CTGAATTGTGGCACACTAGG+TGG + chr8_1:16253029-16253048 Msa1181730:intron 50.0%
CACTTACAGGTATGCGACCA+TGG - chr8_1:16253487-16253506 None:intergenic 50.0%
CATGGTCGCATACCTGTAAG+TGG + chr8_1:16253485-16253504 Msa1181730:CDS 50.0%
!! TCATCTGCCTCTGGTGCTGT+TGG + chr8_1:16249771-16249790 Msa1181730:intron 55.0%
TGTCAGACACCAACGCGTGT+CGG - chr8_1:16250315-16250334 None:intergenic 55.0%
TGAGAATGGCCCTGCAGCTT+TGG + chr8_1:16250794-16250813 Msa1181730:intron 55.0%
! AATGGCCCTGCAGCTTTGGT+TGG + chr8_1:16250798-16250817 Msa1181730:intron 55.0%
!! TTCCTGAGATGGCGGAAGTG+AGG + chr8_1:16251959-16251978 Msa1181730:intron 55.0%
TTCCTCACTTCCGCCATCTC+AGG - chr8_1:16251964-16251983 None:intergenic 55.0%
TTGCAGCCACTGACAGGCTT+TGG + chr8_1:16252335-16252354 Msa1181730:intron 55.0%
CCGGCATATGCAGTCATTCC+CGG - chr8_1:16252632-16252651 None:intergenic 55.0%
CCGGGAATGACTGCATATGC+CGG + chr8_1:16252629-16252648 Msa1181730:CDS 55.0%
!! TCTGCTGCATCTGGTGCTGT+TGG + chr8_1:16252698-16252717 Msa1181730:CDS 55.0%
! TGTTGGTGTCCGACACGCGT+TGG + chr8_1:16250303-16250322 Msa1181730:intron 60.0%
CACACACAGGTATGCGCCCA+TGG - chr8_1:16250581-16250600 None:intergenic 60.0%
CATGGGCGCATACCTGTGTG+TGG + chr8_1:16250579-16250598 Msa1181730:intron 60.0%
!! GGACTTGGTGCTCTCACCCC+TGG + chr8_1:16252170-16252189 Msa1181730:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 16249148 16254034 16249148 ID=Msa1181730;Name=Msa1181730
chr8_1 mRNA 16249148 16254034 16249148 ID=Msa1181730-mRNA-1;Parent=Msa1181730;Name=Msa1181730-mRNA-1;_AED=0.35;_eAED=0.35;_QI=229|1|1|1|0.66|0.42|7|214|287
chr8_1 exon 16249148 16249204 16249148 ID=Msa1181730-mRNA-1:exon:6082;Parent=Msa1181730-mRNA-1
chr8_1 exon 16251965 16252196 16251965 ID=Msa1181730-mRNA-1:exon:6083;Parent=Msa1181730-mRNA-1
chr8_1 exon 16252341 16252515 16252341 ID=Msa1181730-mRNA-1:exon:6084;Parent=Msa1181730-mRNA-1
chr8_1 exon 16252624 16252790 16252624 ID=Msa1181730-mRNA-1:exon:6085;Parent=Msa1181730-mRNA-1
chr8_1 exon 16253048 16253130 16253048 ID=Msa1181730-mRNA-1:exon:6086;Parent=Msa1181730-mRNA-1
chr8_1 exon 16253403 16253869 16253403 ID=Msa1181730-mRNA-1:exon:6087;Parent=Msa1181730-mRNA-1
chr8_1 exon 16253909 16254034 16253909 ID=Msa1181730-mRNA-1:exon:6088;Parent=Msa1181730-mRNA-1
chr8_1 five_prime_UTR 16249148 16249204 16249148 ID=Msa1181730-mRNA-1:five_prime_utr;Parent=Msa1181730-mRNA-1
chr8_1 five_prime_UTR 16251965 16252136 16251965 ID=Msa1181730-mRNA-1:five_prime_utr;Parent=Msa1181730-mRNA-1
chr8_1 CDS 16252137 16252196 16252137 ID=Msa1181730-mRNA-1:cds;Parent=Msa1181730-mRNA-1
chr8_1 CDS 16252341 16252515 16252341 ID=Msa1181730-mRNA-1:cds;Parent=Msa1181730-mRNA-1
chr8_1 CDS 16252624 16252790 16252624 ID=Msa1181730-mRNA-1:cds;Parent=Msa1181730-mRNA-1
chr8_1 CDS 16253048 16253130 16253048 ID=Msa1181730-mRNA-1:cds;Parent=Msa1181730-mRNA-1
chr8_1 CDS 16253403 16253781 16253403 ID=Msa1181730-mRNA-1:cds;Parent=Msa1181730-mRNA-1
chr8_1 three_prime_UTR 16253782 16253869 16253782 ID=Msa1181730-mRNA-1:three_prime_utr;Parent=Msa1181730-mRNA-1
chr8_1 three_prime_UTR 16253909 16254034 16253909 ID=Msa1181730-mRNA-1:three_prime_utr;Parent=Msa1181730-mRNA-1
Gene Sequence

>Msa1181730

ATGAGACTCCTGATGACCAAGGACACTACTGCAGGACTTGGTGCTCTCACCCCTGGTTCTCCACTGACAGGCTTTGGAGTATCTAAAGTTGTAGAATCTGGACATCCAGATTATAAGAAAGATGATTTAGTTTGGAGTCTTACTAAATGGGAAGAGTATAGTTTGGTTCCTACAACTGGAATGTTCAAAATCGAGCACACTGATGTCCCACTTTCCTATTATACTGGAATTCTTGGTATGCCGGGAATGACTGCATATGCCGGTTTCTTTGAATTAGGCAGTCCTAAGAAAGGAGAGAATGTTTATGTTTCTGCTGCATCTGGTGCTGTTGGTCAACTTGTAGGTCAATTTGCAAAACTGCATGGTTGTTATGTTGTTGGAAGTGCTGGTACTAAAGAAAAGGTGGATCTTTTGAAGAATAAATTTGGATATGATGAAGCATTTAACTACAAAGAAGAACCAGACCTCAATGCAGCTTTAAAAAGGTACTTTCCAGAAGGCATTGACATTTACTTTGAGAATGTTGGGGGAAAGACACTTGATGCTGTACTTTTGAATATGCGAGTCCATGGTCGCATACCTGTAAGTGGAATGATCTCACAGTACAATCTTACTCAACCTGAAGGTGTCACAAATTTGGCACAAATCATATATAAGCGGATTCGGATCGAGGGTTTTGTTATATCTGATTACTTTCACCTTTATACAAAATTCTTGGAGTTTGTCCTGCCTCTTATAAGAGAAGGAAAGGTTGTGTATGTGGAAGACATAGCTGAGGGTCTTGAGAATGGTCCTGCTGCATTGATTGGCCTATACAGTGGTCGCAATGTTGGTAAACAAGTGGTTGTTGTTGCTCATGAATGA

Protein sequence

>Msa1181730

MRLLMTKDTTAGLGALTPGSPLTGFGVSKVVESGHPDYKKDDLVWSLTKWEEYSLVPTTGMFKIEHTDVPLSYYTGILGMPGMTAYAGFFELGSPKKGENVYVSAASGAVGQLVGQFAKLHGCYVVGSAGTKEKVDLLKNKFGYDEAFNYKEEPDLNAALKRYFPEGIDIYFENVGGKTLDAVLLNMRVHGRIPVSGMISQYNLTQPEGVTNLAQIIYKRIRIEGFVISDYFHLYTKFLEFVLPLIREGKVVYVEDIAEGLENGPAALIGLYSGRNVGKQVVVVAHE*