Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287210 | XP_013445567.1 | 78.326 | 466 | 40 | 7 | 1 | 409 | 1 | 462 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287210 | A0A072TRW5 | 78.326 | 466 | 40 | 7 | 1 | 409 | 1 | 462 | 0.0 | 660 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa1287210 | 0.801537 | 8.594211e-49 | -8.615850e-47 |
| Msa0687630 | Msa1287210 | 0.811567 | 6.561888e-51 | -8.615850e-47 |
| Msa0824640 | Msa1287210 | 0.801498 | 8.754573e-49 | -8.615850e-47 |
| Msa0127310 | Msa1287210 | 0.811142 | 8.116900e-51 | -8.615850e-47 |
| Msa0187930 | Msa1287210 | 0.802024 | 6.825005e-49 | -8.615850e-47 |
| Msa0194540 | Msa1287210 | 0.807527 | 4.839986e-50 | -8.615850e-47 |
| Msa1227690 | Msa1287210 | 0.807252 | 5.533904e-50 | -8.615850e-47 |
| Msa1246430 | Msa1287210 | 0.831159 | 1.955381e-55 | -8.615850e-47 |
| Msa1270620 | Msa1287210 | 0.801855 | 7.393839e-49 | -8.615850e-47 |
| Msa1270690 | Msa1287210 | 0.804652 | 1.948929e-49 | -8.615850e-47 |
| Msa1286780 | Msa1287210 | 0.822013 | 2.972404e-53 | -8.615850e-47 |
| Msa1287170 | Msa1287210 | 0.842785 | 2.092089e-58 | -8.615850e-47 |
| Msa1287210 | Msa1306990 | 0.820776 | 5.736623e-53 | -8.615850e-47 |
| Msa1287210 | Msa1307950 | 0.815794 | 7.701489e-52 | -8.615850e-47 |
| Msa1287210 | Msa1310690 | 0.804105 | 2.533562e-49 | -8.615850e-47 |
| Msa1287210 | Msa1404190 | 0.818940 | 1.508020e-52 | -8.615850e-47 |
| Msa1287210 | Msa1442850 | 0.826826 | 2.191635e-54 | -8.615850e-47 |
| Msa1287210 | Msa1465080 | 0.802883 | 4.540938e-49 | -8.615850e-47 |
| Msa0402330 | Msa1287210 | 0.805020 | 1.633135e-49 | -8.615850e-47 |
| Msa0416400 | Msa1287210 | 0.802272 | 6.069964e-49 | -8.615850e-47 |
| Msa0268130 | Msa1287210 | 0.804707 | 1.898278e-49 | -8.615850e-47 |
| Msa0310410 | Msa1287210 | 0.804003 | 2.660757e-49 | -8.615850e-47 |
| Msa1126770 | Msa1287210 | 0.800304 | 1.534651e-48 | -8.615850e-47 |
| Msa1127890 | Msa1287210 | 0.814848 | 1.250033e-51 | -8.615850e-47 |
| Msa1179950 | Msa1287210 | 0.810290 | 1.240778e-50 | -8.615850e-47 |
| Msa1179980 | Msa1287210 | 0.808080 | 3.692283e-50 | -8.615850e-47 |
| Msa0508630 | Msa1287210 | 0.802181 | 6.337212e-49 | -8.615850e-47 |
| Msa0864010 | Msa1287210 | 0.805408 | 1.354132e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1287210 | MtrunA17_Chr8g0360801 | 78.326 | 466 | 40 | 7 | 1 | 409 | 1 | 462 | 0.0 | 660 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 96 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTTAGGTGATAAATTT+TGG | 0.145929 | 8_3:+37039474 | Msa1287210:three_prime_UTR |
| AGTTGCCCAGTTTCAAAATA+AGG | 0.208940 | 8_3:+37039346 | Msa1287210:three_prime_UTR |
| TGTTGGAAGTTCAAGTTCTA+TGG | 0.256545 | 8_3:+37037054 | Msa1287210:CDS |
| AACACTACAACTACAAGAAT+TGG | 0.271431 | 8_3:+37036819 | Msa1287210:CDS |
| AGGGGTCGTAAATCGTCTTC+TGG | 0.277018 | 8_3:+37037397 | Msa1287210:intron |
| TGTACTAACTCTTGTATATA+GGG | 0.293798 | 8_3:+37039419 | Msa1287210:three_prime_UTR |
| GTGTACTAACTCTTGTATAT+AGG | 0.299171 | 8_3:+37039418 | Msa1287210:three_prime_UTR |
| AAACTGGGCAACTTCTTTCC+TGG | 0.305393 | 8_3:-37039336 | None:intergenic |
| AAACTCTACCATCGGTAAAA+AGG | 0.306602 | 8_3:+37038002 | Msa1287210:CDS |
| GACTCATTGAAGCTTTATAT+TGG | 0.320301 | 8_3:+37039392 | Msa1287210:three_prime_UTR |
| AAAGGAAAAGGAATAATAAT+AGG | 0.322246 | 8_3:+37037559 | Msa1287210:CDS |
| TTTATTCACTGTCAATTTCC+TGG | 0.361000 | 8_3:-37038055 | None:intergenic |
| AAGTTCAAGTACAATGTTAC+AGG | 0.361419 | 8_3:+37037963 | Msa1287210:CDS |
| TATAGGGTGAGTGGGTAGTA+TGG | 0.366049 | 8_3:+37039435 | Msa1287210:three_prime_UTR |
| GAAGGATTTACTTGCGGTAA+TGG | 0.378545 | 8_3:+37039275 | Msa1287210:CDS |
| AATTTATCACCTAACATTGC+AGG | 0.381514 | 8_3:-37039470 | None:intergenic |
| CAGTGAGTAGTACCAGTCTT+AGG | 0.383306 | 8_3:+37037314 | Msa1287210:CDS |
| TCAGGACCAGCATAAATATA+TGG | 0.383753 | 8_3:+37037249 | Msa1287210:CDS |
| GTTGCCCAGTTTCAAAATAA+GGG | 0.393714 | 8_3:+37039347 | Msa1287210:three_prime_UTR |
| ACACTACAACTACAAGAATT+GGG | 0.394132 | 8_3:+37036820 | Msa1287210:CDS |
| TGACCCCAGCCTGCAATGTT+AGG | 0.394505 | 8_3:+37039461 | Msa1287210:three_prime_UTR |
| TCAATGAGTCGTGTGATATC+AGG | 0.402861 | 8_3:-37039379 | None:intergenic |
| ATCACCTAACATTGCAGGCT+GGG | 0.405445 | 8_3:-37039465 | None:intergenic |
| CGGCATCTTCATCGATCATT+GGG | 0.408596 | 8_3:+37035924 | Msa1287210:CDS |
| ATCAGCAGCTTTGACAATAC+TGG | 0.420962 | 8_3:+37038170 | Msa1287210:CDS |
| AGCTGTAATGGAAGATGTCT+TGG | 0.424271 | 8_3:-37037530 | None:intergenic |
| ACGGCATCTTCATCGATCAT+TGG | 0.427822 | 8_3:+37035923 | Msa1287210:CDS |
| AAGGCTAGTTGCAATCTTGT+TGG | 0.439609 | 8_3:+37037037 | Msa1287210:CDS |
| TCAGTTAGAAGCGTTAGTTT+TGG | 0.442082 | 8_3:+37037193 | Msa1287210:CDS |
| GGGGTCGTAAATCGTCTTCT+GGG | 0.444556 | 8_3:+37037398 | Msa1287210:intron |
| ATCCTTCTAGCTGGATTACC+TGG | 0.444687 | 8_3:-37039259 | None:intergenic |
| AACCAGGTAATCCAGCTAGA+AGG | 0.446703 | 8_3:+37039257 | Msa1287210:CDS |
| CATCAATGTTGCAAAGTCAT+TGG | 0.449370 | 8_3:+37037591 | Msa1287210:CDS |
| CGCAAGTAAATCCTTCTAGC+TGG | 0.462244 | 8_3:-37039268 | None:intergenic |
| TCCATTACAGCTGAAGGAAA+AGG | 0.468562 | 8_3:+37037541 | Msa1287210:CDS |
| CGAAAATCACAGATAAGAAC+AGG | 0.470754 | 8_3:+37037488 | Msa1287210:CDS |
| GATAAGAACAGGTGCAATCC+TGG | 0.472976 | 8_3:+37037499 | Msa1287210:CDS |
| CTTGATTTCGAGACTGAAGA+AGG | 0.477777 | 8_3:-37036791 | None:intergenic |
| GATGTCTTGGATTTATTACC+AGG | 0.480862 | 8_3:-37037517 | None:intergenic |
| TCAAATGTTAGCAGGACAAA+AGG | 0.481636 | 8_3:+37036953 | Msa1287210:CDS |
| AGAACATAATCGTCAACATA+AGG | 0.482359 | 8_3:+37038134 | Msa1287210:CDS |
| ACAAACTTAGCTTCATAACT+AGG | 0.487569 | 8_3:-37037448 | None:intergenic |
| CTCGTTGAGTTGGAGAATCA+TGG | 0.489131 | 8_3:+37035885 | Msa1287210:exon |
| AATCAACATCAAATGTTAGC+AGG | 0.490353 | 8_3:+37036945 | Msa1287210:CDS |
| ATTCTCTTTCCCCTTGTCAA+AGG | 0.493927 | 8_3:-37038028 | None:intergenic |
| AGTAGAAGCCTCAAGAGTTC+AGG | 0.496950 | 8_3:+37037231 | Msa1287210:CDS |
| TCACTCTGGTGAGGAGGCAG+TGG | 0.497952 | 8_3:+37036754 | Msa1287210:CDS |
| TTGATTGTTGAAGCTAACTC+TGG | 0.505940 | 8_3:+37036446 | Msa1287210:CDS |
| TATCACCTAACATTGCAGGC+TGG | 0.507265 | 8_3:-37039466 | None:intergenic |
| TCTTCTGGGAAGTCTAGTGT+TGG | 0.508703 | 8_3:+37037412 | Msa1287210:CDS |
| ACAGCTGAAGGAAAAGGAAA+AGG | 0.511415 | 8_3:+37037547 | Msa1287210:CDS |
| ATGCTGGTCCTGAACTCTTG+AGG | 0.511672 | 8_3:-37037239 | None:intergenic |
| TGAGGAGGCAGTGGCGTCGC+CGG | 0.512983 | 8_3:+37036763 | Msa1287210:CDS |
| AAAAGTCTCAAAAGTGGAGA+TGG | 0.515736 | 8_3:+37037354 | Msa1287210:CDS |
| TGATGATGAAAAGCCACAAA+AGG | 0.516913 | 8_3:-37039543 | None:intergenic |
| AAGTCAAAATTTGCTCACTC+TGG | 0.517195 | 8_3:+37036740 | Msa1287210:CDS |
| TTTCACAGTCCTCGTTGAGT+TGG | 0.519188 | 8_3:+37035875 | Msa1287210:five_prime_UTR |
| AACAATTTGAAGCACCTATG+TGG | 0.521866 | 8_3:+37036417 | Msa1287210:CDS |
| ATGAAGAAGGTGTTCTTGCA+AGG | 0.525891 | 8_3:+37038085 | Msa1287210:CDS |
| ACTCGCGAGCAGACAACTGA+TGG | 0.536082 | 8_3:-37036715 | None:intergenic |
| TCACCTAACATTGCAGGCTG+GGG | 0.537633 | 8_3:-37039464 | None:intergenic |
| AACACCAAAAGTCTCAAAAG+TGG | 0.540910 | 8_3:+37037348 | Msa1287210:CDS |
| CTCTTGTATATAGGGTGAGT+GGG | 0.541586 | 8_3:+37039427 | Msa1287210:three_prime_UTR |
| ACATCTTCCATTACAGCTGA+AGG | 0.548952 | 8_3:+37037535 | Msa1287210:CDS |
| GGAAAAGGAATAATAATAGG+AGG | 0.550465 | 8_3:+37037562 | Msa1287210:CDS |
| CTTCTGGGAAGTCTAGTGTT+GGG | 0.550470 | 8_3:+37037413 | Msa1287210:CDS |
| AACAATCGTGTGCGAAACGA+CGG | 0.550605 | 8_3:-37035819 | None:intergenic |
| ACACCTCCATATATTTATGC+TGG | 0.557766 | 8_3:-37037255 | None:intergenic |
| TCAAAAGTGGAGATGGATGT+TGG | 0.563203 | 8_3:+37037361 | Msa1287210:CDS |
| CAATGTGAGGCAAAGAAACC+AGG | 0.565344 | 8_3:+37039241 | Msa1287210:CDS |
| CACTACAACTACAAGAATTG+GGG | 0.565346 | 8_3:+37036821 | Msa1287210:CDS |
| TCTTCAGTCTCGAAATCAAG+AGG | 0.567981 | 8_3:+37036794 | Msa1287210:CDS |
| ACTCTTGTATATAGGGTGAG+TGG | 0.571473 | 8_3:+37039426 | Msa1287210:three_prime_UTR |
| CTTCTCAGAACTCGAATCGA+TGG | 0.578175 | 8_3:-37035849 | None:intergenic |
| CAACATAAGGATGACAAAGC+AGG | 0.583166 | 8_3:+37038147 | Msa1287210:CDS |
| GTTTGTTTCAAAGCAGCAGA+GGG | 0.585395 | 8_3:+37037465 | Msa1287210:CDS |
| ATTTGCTCACTCTGGTGAGG+AGG | 0.588243 | 8_3:+37036748 | Msa1287210:CDS |
| GAGACTGAAGAAGGAAGTGC+CGG | 0.589263 | 8_3:-37036782 | None:intergenic |
| TGAAGAAGGTGTTCTTGCAA+GGG | 0.589743 | 8_3:+37038086 | Msa1287210:CDS |
| ACAATCAAATCTACCCACAT+AGG | 0.594116 | 8_3:-37036431 | None:intergenic |
| ACAATTTGAAGCACCTATGT+GGG | 0.601215 | 8_3:+37036418 | Msa1287210:CDS |
| GTTGCAGAACTGATGATGAC+TGG | 0.605883 | 8_3:+37036572 | Msa1287210:intron |
| AGGGGAAAGAGAATGCTACC+AGG | 0.607255 | 8_3:+37038037 | Msa1287210:CDS |
| ATGGAAGCTTCTAAGAAGAA+CGG | 0.610680 | 8_3:+37035904 | Msa1287210:CDS |
| TGAAAGGTCTACAAGAAGCA+TGG | 0.613540 | 8_3:+37037090 | Msa1287210:CDS |
| CAGCTAGAAGGATTTACTTG+CGG | 0.614400 | 8_3:+37039269 | Msa1287210:CDS |
| AAAATTTGCTCACTCTGGTG+AGG | 0.622334 | 8_3:+37036745 | Msa1287210:CDS |
| AAAAGGAGGCCTTTGACAAG+GGG | 0.632559 | 8_3:+37038019 | Msa1287210:CDS |
| CAGGGGAAAAGCTACGTCGA+AGG | 0.638153 | 8_3:+37037018 | Msa1287210:CDS |
| GAAGAAGGTGTTCTTGCAAG+GGG | 0.643592 | 8_3:+37038087 | Msa1287210:CDS |
| AGTTCAAGTACAATGTTACA+GGG | 0.653116 | 8_3:+37037964 | Msa1287210:CDS |
| AGTTTGTTTCAAAGCAGCAG+AGG | 0.674189 | 8_3:+37037464 | Msa1287210:CDS |
| GGACCAGCATAAATATATGG+AGG | 0.674367 | 8_3:+37037252 | Msa1287210:CDS |
| ACTACAACTACAAGAATTGG+GGG | 0.675114 | 8_3:+37036822 | Msa1287210:CDS |
| AAAAGTCAACGATCAATGTG+AGG | 0.680009 | 8_3:+37039228 | Msa1287210:CDS |
| CATGATTCTCCAACTCAACG+AGG | 0.701825 | 8_3:-37035884 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAACAGTTATTAATTTTA+GGG | + | chr8_3:37036323-37036342 | Msa1287210:intron | 10.0% |
| !!! | TTGATTTTTTTATTTTGTTT+TGG | + | chr8_3:37036545-37036564 | Msa1287210:intron | 10.0% |
| !! | TAAACTAAAAAGTAAATTAT+AGG | - | chr8_3:37037875-37037894 | None:intergenic | 10.0% |
| !!! | TAGAATGATAATATTTTTTT+TGG | - | chr8_3:37038631-37038650 | None:intergenic | 10.0% |
| !!! | TGAAAAATTTGTTTCAATTA+AGG | + | chr8_3:37036182-37036201 | Msa1287210:intron | 15.0% |
| !!! | GAAAAATTTGTTTCAATTAA+GGG | + | chr8_3:37036183-37036202 | Msa1287210:intron | 15.0% |
| !!! | CATTAACAGTTATTAATTTT+AGG | + | chr8_3:37036322-37036341 | Msa1287210:intron | 15.0% |
| !!! | GCTATTAATTTATTTTGTTA+AGG | + | chr8_3:37036354-37036373 | Msa1287210:intron | 15.0% |
| !! | TGAATAAAGATAAAATTTGT+AGG | - | chr8_3:37037663-37037682 | None:intergenic | 15.0% |
| !!! | CATATCTAGAATTAAATATT+TGG | - | chr8_3:37038535-37038554 | None:intergenic | 15.0% |
| !! | TAGTAGAATTTAAACAAAAA+GGG | - | chr8_3:37038896-37038915 | None:intergenic | 15.0% |
| !! | ATAGTAGAATTTAAACAAAA+AGG | - | chr8_3:37038897-37038916 | None:intergenic | 15.0% |
| !! | AATTATTATCACATTATTAC+AGG | + | chr8_3:37039204-37039223 | Msa1287210:intron | 15.0% |
| !! | ATTATTATCACATTATTACA+GGG | + | chr8_3:37039205-37039224 | Msa1287210:intron | 15.0% |
| !! | AATTGAACATGTTGTAAAAT+TGG | - | chr8_3:37036299-37036318 | None:intergenic | 20.0% |
| !!! | TATTAATCTGAATGTTTTGT+TGG | + | chr8_3:37036850-37036869 | Msa1287210:intron | 20.0% |
| !! | TGGATAAAAAGAATTATGAA+AGG | + | chr8_3:37037074-37037093 | Msa1287210:CDS | 20.0% |
| !! | AAAGGAAAAGGAATAATAAT+AGG | + | chr8_3:37037559-37037578 | Msa1287210:CDS | 20.0% |
| !! | AAGTAAATTATAGGATATCT+AGG | - | chr8_3:37037866-37037885 | None:intergenic | 20.0% |
| !! | AATAAAAATTGCAATGAAGA+AGG | + | chr8_3:37038072-37038091 | Msa1287210:CDS | 20.0% |
| !!! | TGATAATATTTTTTTTGGAC+AGG | - | chr8_3:37038626-37038645 | None:intergenic | 20.0% |
| !! | TATGAAATGTTGTCAAATAA+TGG | - | chr8_3:37038946-37038965 | None:intergenic | 20.0% |
| !!! | CGCATTGCATTTTTTTTTTT+AGG | + | chr8_3:37036104-37036123 | Msa1287210:intron | 25.0% |
| ! | TTTGTAATTGTATTACACAC+AGG | + | chr8_3:37036394-37036413 | Msa1287210:intron | 25.0% |
| !!! | TTTTTTGGGTTTTCCATTTT+CGG | + | chr8_3:37036633-37036652 | Msa1287210:intron | 25.0% |
| ! | ATGCAAAAGAAGGATTATAA+GGG | + | chr8_3:37037130-37037149 | Msa1287210:intron | 25.0% |
| !! | TGATGCATTTGATAATCATT+AGG | - | chr8_3:37037759-37037778 | None:intergenic | 25.0% |
| !! | TAACTGTCACTTAATACAAA+GGG | - | chr8_3:37037815-37037834 | None:intergenic | 25.0% |
| !! | ATAACTGTCACTTAATACAA+AGG | - | chr8_3:37037816-37037835 | None:intergenic | 25.0% |
| ! | AATTATAGGATATCTAGGAA+AGG | - | chr8_3:37037861-37037880 | None:intergenic | 25.0% |
| ! | AACAAAAAAAACTCTACCAT+CGG | + | chr8_3:37037994-37038013 | Msa1287210:CDS | 25.0% |
| !!! | ATTAAGTTGATCGAAAAGAT+TGG | - | chr8_3:37038491-37038510 | None:intergenic | 25.0% |
| ! | TTTAAATTCTACTATGCTGA+GGG | + | chr8_3:37038700-37038719 | Msa1287210:intron | 25.0% |
| !! | TGAATAATCACTATTTTCTG+TGG | - | chr8_3:37038981-37039000 | None:intergenic | 25.0% |
| !!! | GAGCATTGAAACAAAAAATA+AGG | - | chr8_3:37039156-37039175 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTCAATGCTCTT+TGG | + | chr8_3:37039158-37039177 | Msa1287210:intron | 25.0% |
| !! | TAATAATTATGCATTAGCCT+TGG | - | chr8_3:37039192-37039211 | None:intergenic | 25.0% |
| ! | TTTGTATTCCTCAAAAAGAA+TGG | - | chr8_3:37039312-37039331 | None:intergenic | 25.0% |
| !!! | TTTTCCCTTATTTTGAAACT+GGG | - | chr8_3:37039354-37039373 | None:intergenic | 25.0% |
| !!! | TTTTTCCCTTATTTTGAAAC+TGG | - | chr8_3:37039355-37039374 | None:intergenic | 25.0% |
| ! | TGTACTAACTCTTGTATATA+GGG | + | chr8_3:37039419-37039438 | Msa1287210:three_prime_UTR | 25.0% |
| !! | CAATGTTAGGTGATAAATTT+TGG | + | chr8_3:37039474-37039493 | Msa1287210:three_prime_UTR | 25.0% |
| !! | TGCAAAAAGAATTTAAGGTT+TGG | - | chr8_3:37039520-37039539 | None:intergenic | 25.0% |
| ! | GGTAATGCAAAAAGAATTTA+AGG | - | chr8_3:37039525-37039544 | None:intergenic | 25.0% |
| ! | ATTCCGGATTTCACATTTTT+AGG | + | chr8_3:37036001-37036020 | Msa1287210:intron | 30.0% |
| ! | TTCCGGATTTCACATTTTTA+GGG | + | chr8_3:37036002-37036021 | Msa1287210:intron | 30.0% |
| AACCCTAAAAATGTGAAATC+CGG | - | chr8_3:37036007-37036026 | None:intergenic | 30.0% | |
| ! | TTATTTGTTCTTCGTTTTCG+TGG | + | chr8_3:37036153-37036172 | Msa1287210:intron | 30.0% |
| TGAAAATATGTGAGTGAGTT+TGG | + | chr8_3:37036472-37036491 | Msa1287210:intron | 30.0% | |
| ! | TGAGTGAGTTTGGATTTTTA+TGG | + | chr8_3:37036482-37036501 | Msa1287210:intron | 30.0% |
| !!! | ATCCCTTCTGGAATATTTTT+TGG | + | chr8_3:37036618-37036637 | Msa1287210:intron | 30.0% |
| !!! | TCCCTTCTGGAATATTTTTT+GGG | + | chr8_3:37036619-37036638 | Msa1287210:intron | 30.0% |
| ACCCAAAAAATATTCCAGAA+GGG | - | chr8_3:37036623-37036642 | None:intergenic | 30.0% | |
| AACCCAAAAAATATTCCAGA+AGG | - | chr8_3:37036624-37036643 | None:intergenic | 30.0% | |
| ! | GTTGCAATCAAATCATTTTC+AGG | + | chr8_3:37036690-37036709 | Msa1287210:intron | 30.0% |
| AACACTACAACTACAAGAAT+TGG | + | chr8_3:37036819-37036838 | Msa1287210:CDS | 30.0% | |
| ACACTACAACTACAAGAATT+GGG | + | chr8_3:37036820-37036839 | Msa1287210:CDS | 30.0% | |
| !!! | TTGAAACAAGGTTCTAGTTT+TGG | + | chr8_3:37036905-37036924 | Msa1287210:intron | 30.0% |
| !!! | GTTCTAGTTTTGGTTATGAA+GGG | + | chr8_3:37036915-37036934 | Msa1287210:intron | 30.0% |
| AATCAACATCAAATGTTAGC+AGG | + | chr8_3:37036945-37036964 | Msa1287210:CDS | 30.0% | |
| AGGATTGATGAGTGAAAAAT+CGG | + | chr8_3:37036973-37036992 | Msa1287210:CDS | 30.0% | |
| GATGCAAAAGAAGGATTATA+AGG | + | chr8_3:37037129-37037148 | Msa1287210:intron | 30.0% | |
| TGCAAAAGAAGGATTATAAG+GGG | + | chr8_3:37037131-37037150 | Msa1287210:intron | 30.0% | |
| !! | ATGTTGGTAACATGAAGTTT+AGG | + | chr8_3:37037377-37037396 | Msa1287210:intron | 30.0% |
| !! | TGTTGGTAACATGAAGTTTA+GGG | + | chr8_3:37037378-37037397 | Msa1287210:intron | 30.0% |
| ACAAACTTAGCTTCATAACT+AGG | - | chr8_3:37037451-37037470 | None:intergenic | 30.0% | |
| GGAAAAGGAATAATAATAGG+AGG | + | chr8_3:37037562-37037581 | Msa1287210:CDS | 30.0% | |
| AAAAATGCATGACTTGAAGA+CGG | - | chr8_3:37037629-37037648 | None:intergenic | 30.0% | |
| ! | TGCATTTGATAATCATTAGG+TGG | - | chr8_3:37037756-37037775 | None:intergenic | 30.0% |
| AAGTTCAAGTACAATGTTAC+AGG | + | chr8_3:37037963-37037982 | Msa1287210:CDS | 30.0% | |
| AGTTCAAGTACAATGTTACA+GGG | + | chr8_3:37037964-37037983 | Msa1287210:CDS | 30.0% | |
| TTTATTCACTGTCAATTTCC+TGG | - | chr8_3:37038058-37038077 | None:intergenic | 30.0% | |
| AGAACATAATCGTCAACATA+AGG | + | chr8_3:37038134-37038153 | Msa1287210:CDS | 30.0% | |
| TTGGAAAGTTTACAGGATAA+TGG | - | chr8_3:37038394-37038413 | None:intergenic | 30.0% | |
| ATTATCCTGTAAACTTTCCA+AGG | + | chr8_3:37038393-37038412 | Msa1287210:intron | 30.0% | |
| ! | CAACTTAATTTTTCTTGCCA+TGG | + | chr8_3:37038502-37038521 | Msa1287210:intron | 30.0% |
| GTTTAAATTCTACTATGCTG+AGG | + | chr8_3:37038699-37038718 | Msa1287210:intron | 30.0% | |
| TTAAATTCTACTATGCTGAG+GGG | + | chr8_3:37038701-37038720 | Msa1287210:intron | 30.0% | |
| !! | TGTACTTCAGTTTTATGACT+TGG | + | chr8_3:37039098-37039117 | Msa1287210:intron | 30.0% |
| GAAACAAAAAATAAGGCGAA+AGG | - | chr8_3:37039149-37039168 | None:intergenic | 30.0% | |
| ! | ATAGCAATCCATTCTTTTTG+AGG | + | chr8_3:37039301-37039320 | Msa1287210:three_prime_UTR | 30.0% |
| ! | GACTCATTGAAGCTTTATAT+TGG | + | chr8_3:37039392-37039411 | Msa1287210:three_prime_UTR | 30.0% |
| GTGTACTAACTCTTGTATAT+AGG | + | chr8_3:37039418-37039437 | Msa1287210:three_prime_UTR | 30.0% | |
| AATTTATCACCTAACATTGC+AGG | - | chr8_3:37039473-37039492 | None:intergenic | 30.0% | |
| ! | TCTTTTTGCATTACCTTTTG+TGG | + | chr8_3:37039530-37039549 | Msa1287210:three_prime_UTR | 30.0% |
| ! | ATGGAAGCTTCTAAGAAGAA+CGG | + | chr8_3:37035904-37035923 | Msa1287210:CDS | 35.0% |
| AAGAAATGAGAACAGAGTGT+TGG | - | chr8_3:37035962-37035981 | None:intergenic | 35.0% | |
| !!! | ACTCTCATTTTCATCGATTC+CGG | + | chr8_3:37035985-37036004 | Msa1287210:intron | 35.0% |
| ! | AACAATTTGAAGCACCTATG+TGG | + | chr8_3:37036417-37036436 | Msa1287210:CDS | 35.0% |
| ! | ACAATTTGAAGCACCTATGT+GGG | + | chr8_3:37036418-37036437 | Msa1287210:CDS | 35.0% |
| ACAATCAAATCTACCCACAT+AGG | - | chr8_3:37036434-37036453 | None:intergenic | 35.0% | |
| TTGATTGTTGAAGCTAACTC+TGG | + | chr8_3:37036446-37036465 | Msa1287210:CDS | 35.0% | |
| TATTCCAGAAGGGATTCTTA+CGG | - | chr8_3:37036613-37036632 | None:intergenic | 35.0% | |
| ! | AAGTCAAAATTTGCTCACTC+TGG | + | chr8_3:37036740-37036759 | Msa1287210:CDS | 35.0% |
| CACTACAACTACAAGAATTG+GGG | + | chr8_3:37036821-37036840 | Msa1287210:CDS | 35.0% | |
| ACTACAACTACAAGAATTGG+GGG | + | chr8_3:37036822-37036841 | Msa1287210:CDS | 35.0% | |
| !! | TGTTTTGTTGGATAAACAGC+AGG | + | chr8_3:37036862-37036881 | Msa1287210:intron | 35.0% |
| !! | GTTTTGTTGGATAAACAGCA+GGG | + | chr8_3:37036863-37036882 | Msa1287210:intron | 35.0% |
| !!! | GGTTCTAGTTTTGGTTATGA+AGG | + | chr8_3:37036914-37036933 | Msa1287210:intron | 35.0% |
| !!! | TAGTTTTGGTTATGAAGGGA+AGG | + | chr8_3:37036919-37036938 | Msa1287210:intron | 35.0% |
| TCAAATGTTAGCAGGACAAA+AGG | + | chr8_3:37036953-37036972 | Msa1287210:CDS | 35.0% | |
| GGATTGATGAGTGAAAAATC+GGG | + | chr8_3:37036974-37036993 | Msa1287210:CDS | 35.0% | |
| GATTGATGAGTGAAAAATCG+GGG | + | chr8_3:37036975-37036994 | Msa1287210:CDS | 35.0% | |
| ! | TGACTTTTGAACACAATACC+AGG | + | chr8_3:37036999-37037018 | Msa1287210:CDS | 35.0% |
| ! | GACTTTTGAACACAATACCA+GGG | + | chr8_3:37037000-37037019 | Msa1287210:CDS | 35.0% |
| ! | ACTTTTGAACACAATACCAG+GGG | + | chr8_3:37037001-37037020 | Msa1287210:CDS | 35.0% |
| ! | TGTTGGAAGTTCAAGTTCTA+TGG | + | chr8_3:37037054-37037073 | Msa1287210:CDS | 35.0% |
| ! | TGAGAGTATGATGCAAAAGA+AGG | + | chr8_3:37037120-37037139 | Msa1287210:intron | 35.0% |
| !!! | TCAGTTAGAAGCGTTAGTTT+TGG | + | chr8_3:37037193-37037212 | Msa1287210:CDS | 35.0% |
| !!! | CAGTTAGAAGCGTTAGTTTT+GGG | + | chr8_3:37037194-37037213 | Msa1287210:CDS | 35.0% |
| TCAGGACCAGCATAAATATA+TGG | + | chr8_3:37037249-37037268 | Msa1287210:CDS | 35.0% | |
| ACACCTCCATATATTTATGC+TGG | - | chr8_3:37037258-37037277 | None:intergenic | 35.0% | |
| ! | TACATGACTTTTCCTAAGAC+TGG | - | chr8_3:37037329-37037348 | None:intergenic | 35.0% |
| AACACCAAAAGTCTCAAAAG+TGG | + | chr8_3:37037348-37037367 | Msa1287210:CDS | 35.0% | |
| !!! | ATCTCCACTTTTGAGACTTT+TGG | - | chr8_3:37037355-37037374 | None:intergenic | 35.0% |
| AAAAGTCTCAAAAGTGGAGA+TGG | + | chr8_3:37037354-37037373 | Msa1287210:CDS | 35.0% | |
| !! | GTTGGTAACATGAAGTTTAG+GGG | + | chr8_3:37037379-37037398 | Msa1287210:intron | 35.0% |
| CGAAAATCACAGATAAGAAC+AGG | + | chr8_3:37037488-37037507 | Msa1287210:CDS | 35.0% | |
| GATGTCTTGGATTTATTACC+AGG | - | chr8_3:37037520-37037539 | None:intergenic | 35.0% | |
| CATCAATGTTGCAAAGTCAT+TGG | + | chr8_3:37037591-37037610 | Msa1287210:CDS | 35.0% | |
| TCTGAATGAGTTAGCAAATC+TGG | + | chr8_3:37037685-37037704 | Msa1287210:intron | 35.0% | |
| AAACTCTACCATCGGTAAAA+AGG | + | chr8_3:37038002-37038021 | Msa1287210:CDS | 35.0% | |
| GTTGCTAGACATCTCAATTA+AGG | - | chr8_3:37038333-37038352 | None:intergenic | 35.0% | |
| GAATGATTAATCACGTTCCT+TGG | - | chr8_3:37038413-37038432 | None:intergenic | 35.0% | |
| AAATATTTGGTCAGAAGCCA+TGG | - | chr8_3:37038522-37038541 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr8_3:37038797-37038816 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr8_3:37038796-37038815 | Msa1287210:intron | 35.0% | |
| TTTAAACAAAAAGGGCAACC+CGG | - | chr8_3:37038888-37038907 | None:intergenic | 35.0% | |
| TTGTCAAATAATGGCTACTG+TGG | - | chr8_3:37038937-37038956 | None:intergenic | 35.0% | |
| TGTTGTCAAATAGCAGCTAT+AGG | - | chr8_3:37039033-37039052 | None:intergenic | 35.0% | |
| GACAACATTGTTTCAACTCA+CGG | + | chr8_3:37039046-37039065 | Msa1287210:intron | 35.0% | |
| AAAAGTCAACGATCAATGTG+AGG | + | chr8_3:37039228-37039247 | Msa1287210:CDS | 35.0% | |
| TTGAGGAATACAAAAACTCC+AGG | + | chr8_3:37039318-37039337 | Msa1287210:three_prime_UTR | 35.0% | |
| AGTTGCCCAGTTTCAAAATA+AGG | + | chr8_3:37039346-37039365 | Msa1287210:three_prime_UTR | 35.0% | |
| GTTGCCCAGTTTCAAAATAA+GGG | + | chr8_3:37039347-37039366 | Msa1287210:three_prime_UTR | 35.0% | |
| ! | TGATGATGAAAAGCCACAAA+AGG | - | chr8_3:37039546-37039565 | None:intergenic | 35.0% |
| ATTCCAGAAGGGATTCTTAC+GGG | - | chr8_3:37036612-37036631 | None:intergenic | 40.0% | |
| ! | GGTTTTCCATTTTCGGTTCA+GGG | + | chr8_3:37036640-37036659 | Msa1287210:intron | 40.0% |
| GTAAAACCCTGAACCGAAAA+TGG | - | chr8_3:37036649-37036668 | None:intergenic | 40.0% | |
| ! | AAAATTTGCTCACTCTGGTG+AGG | + | chr8_3:37036745-37036764 | Msa1287210:CDS | 40.0% |
| CTTGATTTCGAGACTGAAGA+AGG | - | chr8_3:37036794-37036813 | None:intergenic | 40.0% | |
| TCTTCAGTCTCGAAATCAAG+AGG | + | chr8_3:37036794-37036813 | Msa1287210:CDS | 40.0% | |
| AACTACAAGAATTGGGGGAA+AGG | + | chr8_3:37036827-37036846 | Msa1287210:CDS | 40.0% | |
| TAAACAGCAGGGTTTAAGCA+AGG | + | chr8_3:37036874-37036893 | Msa1287210:intron | 40.0% | |
| AAACAGCAGGGTTTAAGCAA+GGG | + | chr8_3:37036875-37036894 | Msa1287210:intron | 40.0% | |
| AAGGGAAGATGCTTGAAACA+AGG | + | chr8_3:37036893-37036912 | Msa1287210:intron | 40.0% | |
| ! | AAGGCTAGTTGCAATCTTGT+TGG | + | chr8_3:37037037-37037056 | Msa1287210:CDS | 40.0% |
| TGAAAGGTCTACAAGAAGCA+TGG | + | chr8_3:37037090-37037109 | Msa1287210:CDS | 40.0% | |
| ! | GGATTATAAGGGGCATAAGA+AGG | + | chr8_3:37037141-37037160 | Msa1287210:intron | 40.0% |
| GGACCAGCATAAATATATGG+AGG | + | chr8_3:37037252-37037271 | Msa1287210:CDS | 40.0% | |
| TCAAAAGTGGAGATGGATGT+TGG | + | chr8_3:37037361-37037380 | Msa1287210:CDS | 40.0% | |
| ! | AGTTTGTTTCAAAGCAGCAG+AGG | + | chr8_3:37037464-37037483 | Msa1287210:CDS | 40.0% |
| GTTTGTTTCAAAGCAGCAGA+GGG | + | chr8_3:37037465-37037484 | Msa1287210:CDS | 40.0% | |
| ! | AGCTGTAATGGAAGATGTCT+TGG | - | chr8_3:37037533-37037552 | None:intergenic | 40.0% |
| ACATCTTCCATTACAGCTGA+AGG | + | chr8_3:37037535-37037554 | Msa1287210:CDS | 40.0% | |
| TCCATTACAGCTGAAGGAAA+AGG | + | chr8_3:37037541-37037560 | Msa1287210:CDS | 40.0% | |
| ! | TCCTTTTCCTTCAGCTGTAA+TGG | - | chr8_3:37037545-37037564 | None:intergenic | 40.0% |
| ACAGCTGAAGGAAAAGGAAA+AGG | + | chr8_3:37037547-37037566 | Msa1287210:CDS | 40.0% | |
| ATGAGTTAGCAAATCTGGTC+CGG | + | chr8_3:37037690-37037709 | Msa1287210:intron | 40.0% | |
| ! | AATGCCTGTTTTATACGAGC+CGG | - | chr8_3:37037712-37037731 | None:intergenic | 40.0% |
| TATGTGCTTATCGAGAATGC+TGG | + | chr8_3:37037907-37037926 | Msa1287210:intron | 40.0% | |
| ATGTGCTTATCGAGAATGCT+GGG | + | chr8_3:37037908-37037927 | Msa1287210:intron | 40.0% | |
| ! | TGCTGGGTTTACATTTTCAC+AGG | + | chr8_3:37037924-37037943 | Msa1287210:intron | 40.0% |
| TAAAAAGGAGGCCTTTGACA+AGG | + | chr8_3:37038017-37038036 | Msa1287210:CDS | 40.0% | |
| AAAAAGGAGGCCTTTGACAA+GGG | + | chr8_3:37038018-37038037 | Msa1287210:CDS | 40.0% | |
| ATTCTCTTTCCCCTTGTCAA+AGG | - | chr8_3:37038031-37038050 | None:intergenic | 40.0% | |
| !! | ATGAAGAAGGTGTTCTTGCA+AGG | + | chr8_3:37038085-37038104 | Msa1287210:CDS | 40.0% |
| !! | TGAAGAAGGTGTTCTTGCAA+GGG | + | chr8_3:37038086-37038105 | Msa1287210:CDS | 40.0% |
| CAACATAAGGATGACAAAGC+AGG | + | chr8_3:37038147-37038166 | Msa1287210:CDS | 40.0% | |
| ! | ATCAGCAGCTTTGACAATAC+TGG | + | chr8_3:37038170-37038189 | Msa1287210:CDS | 40.0% |
| ACGTTCCTTGGAAAGTTTAC+AGG | - | chr8_3:37038401-37038420 | None:intergenic | 40.0% | |
| AACACCTGTGTTGTCAATCA+CGG | + | chr8_3:37038656-37038675 | Msa1287210:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr8_3:37038746-37038765 | Msa1287210:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr8_3:37038790-37038809 | Msa1287210:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr8_3:37038791-37038810 | Msa1287210:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr8_3:37038822-37038841 | Msa1287210:intron | 40.0% | |
| CAGCTAGAAGGATTTACTTG+CGG | + | chr8_3:37039269-37039288 | Msa1287210:CDS | 40.0% | |
| GAAGGATTTACTTGCGGTAA+TGG | + | chr8_3:37039275-37039294 | Msa1287210:CDS | 40.0% | |
| TCAATGAGTCGTGTGATATC+AGG | - | chr8_3:37039382-37039401 | None:intergenic | 40.0% | |
| ACTCTTGTATATAGGGTGAG+TGG | + | chr8_3:37039426-37039445 | Msa1287210:three_prime_UTR | 40.0% | |
| CTCTTGTATATAGGGTGAGT+GGG | + | chr8_3:37039427-37039446 | Msa1287210:three_prime_UTR | 40.0% | |
| AACAATCGTGTGCGAAACGA+CGG | - | chr8_3:37035822-37035841 | None:intergenic | 45.0% | |
| CTTCTCAGAACTCGAATCGA+TGG | - | chr8_3:37035852-37035871 | None:intergenic | 45.0% | |
| TTTCACAGTCCTCGTTGAGT+TGG | + | chr8_3:37035875-37035894 | Msa1287210:five_prime_UTR | 45.0% | |
| CATGATTCTCCAACTCAACG+AGG | - | chr8_3:37035887-37035906 | None:intergenic | 45.0% | |
| !! | CTCGTTGAGTTGGAGAATCA+TGG | + | chr8_3:37035885-37035904 | Msa1287210:exon | 45.0% |
| ACGGCATCTTCATCGATCAT+TGG | + | chr8_3:37035923-37035942 | Msa1287210:CDS | 45.0% | |
| CGGCATCTTCATCGATCATT+GGG | + | chr8_3:37035924-37035943 | Msa1287210:CDS | 45.0% | |
| ! | CATCGATCATTGGGCTTTTC+TGG | + | chr8_3:37035933-37035952 | Msa1287210:CDS | 45.0% |
| ! | GTTGCAGAACTGATGATGAC+TGG | + | chr8_3:37036572-37036591 | Msa1287210:intron | 45.0% |
| ! | GGGTTTTCCATTTTCGGTTC+AGG | + | chr8_3:37036639-37036658 | Msa1287210:intron | 45.0% |
| ! | CGGTTCAGGGTTTTACTGAA+TGG | + | chr8_3:37036653-37036672 | Msa1287210:intron | 45.0% |
| AGTAGAAGCCTCAAGAGTTC+AGG | + | chr8_3:37037231-37037250 | Msa1287210:CDS | 45.0% | |
| CAGTGAGTAGTACCAGTCTT+AGG | + | chr8_3:37037314-37037333 | Msa1287210:CDS | 45.0% | |
| ! | TCTTCTGGGAAGTCTAGTGT+TGG | + | chr8_3:37037412-37037431 | Msa1287210:CDS | 45.0% |
| ! | CTTCTGGGAAGTCTAGTGTT+GGG | + | chr8_3:37037413-37037432 | Msa1287210:CDS | 45.0% |
| GATAAGAACAGGTGCAATCC+TGG | + | chr8_3:37037499-37037518 | Msa1287210:CDS | 45.0% | |
| CTCTACCATCGGTAAAAAGG+AGG | + | chr8_3:37038005-37038024 | Msa1287210:CDS | 45.0% | |
| ! | AAAGGCCTCCTTTTTACCGA+TGG | - | chr8_3:37038013-37038032 | None:intergenic | 45.0% |
| AAAAGGAGGCCTTTGACAAG+GGG | + | chr8_3:37038019-37038038 | Msa1287210:CDS | 45.0% | |
| !! | GAAGAAGGTGTTCTTGCAAG+GGG | + | chr8_3:37038087-37038106 | Msa1287210:CDS | 45.0% |
| CAATCCGTGATTGACAACAC+AGG | - | chr8_3:37038663-37038682 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr8_3:37038752-37038771 | Msa1287210:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr8_3:37038753-37038772 | Msa1287210:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8_3:37038786-37038805 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr8_3:37038818-37038837 | Msa1287210:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr8_3:37038821-37038840 | Msa1287210:intron | 45.0% | |
| GCAGCAATGCTATAGTGTAG+TGG | - | chr8_3:37039008-37039027 | None:intergenic | 45.0% | |
| GCTCTTTGGCAAATCTTCCA+AGG | + | chr8_3:37039172-37039191 | Msa1287210:intron | 45.0% | |
| CAATGTGAGGCAAAGAAACC+AGG | + | chr8_3:37039241-37039260 | Msa1287210:CDS | 45.0% | |
| AACCAGGTAATCCAGCTAGA+AGG | + | chr8_3:37039257-37039276 | Msa1287210:CDS | 45.0% | |
| ! | ATCCTTCTAGCTGGATTACC+TGG | - | chr8_3:37039262-37039281 | None:intergenic | 45.0% |
| CGCAAGTAAATCCTTCTAGC+TGG | - | chr8_3:37039271-37039290 | None:intergenic | 45.0% | |
| AAACTGGGCAACTTCTTTCC+TGG | - | chr8_3:37039339-37039358 | None:intergenic | 45.0% | |
| TATAGGGTGAGTGGGTAGTA+TGG | + | chr8_3:37039435-37039454 | Msa1287210:three_prime_UTR | 45.0% | |
| ATCACCTAACATTGCAGGCT+GGG | - | chr8_3:37039468-37039487 | None:intergenic | 45.0% | |
| TATCACCTAACATTGCAGGC+TGG | - | chr8_3:37039469-37039488 | None:intergenic | 45.0% | |
| !! | TTAAATTATAATTTAACAAA+AGG | - | chr8_3:37038365-37038384 | None:intergenic | 5.0% |
| !! | TTGTTAAATTATAATTTAAA+AGG | + | chr8_3:37038366-37038385 | Msa1287210:intron | 5.0% |
| ATTTGCTCACTCTGGTGAGG+AGG | + | chr8_3:37036748-37036767 | Msa1287210:CDS | 50.0% | |
| ! | GAGACTGAAGAAGGAAGTGC+CGG | - | chr8_3:37036785-37036804 | None:intergenic | 50.0% |
| ATGCTGGTCCTGAACTCTTG+AGG | - | chr8_3:37037242-37037261 | None:intergenic | 50.0% | |
| AGGGGTCGTAAATCGTCTTC+TGG | + | chr8_3:37037397-37037416 | Msa1287210:intron | 50.0% | |
| GGGGTCGTAAATCGTCTTCT+GGG | + | chr8_3:37037398-37037417 | Msa1287210:intron | 50.0% | |
| ! | TGGTCCGGCTCGTATAAAAC+AGG | + | chr8_3:37037705-37037724 | Msa1287210:intron | 50.0% |
| AGGGGAAAGAGAATGCTACC+AGG | + | chr8_3:37038037-37038056 | Msa1287210:CDS | 50.0% | |
| ACTATGCTGAGGGGTAACCT+TGG | + | chr8_3:37038710-37038729 | Msa1287210:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr8_3:37038730-37038749 | None:intergenic | 50.0% | |
| TCACCTAACATTGCAGGCTG+GGG | - | chr8_3:37039467-37039486 | None:intergenic | 50.0% | |
| CCAGAAGGGATTCTTACGGG+TGG | - | chr8_3:37036609-37036628 | None:intergenic | 55.0% | |
| CCACCCGTAAGAATCCCTTC+TGG | + | chr8_3:37036606-37036625 | Msa1287210:intron | 55.0% | |
| ACTCGCGAGCAGACAACTGA+TGG | - | chr8_3:37036718-37036737 | None:intergenic | 55.0% | |
| ! | CTTCGACGTAGCTTTTCCCC+TGG | - | chr8_3:37037020-37037039 | None:intergenic | 55.0% |
| CAGGGGAAAAGCTACGTCGA+AGG | + | chr8_3:37037018-37037037 | Msa1287210:CDS | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr8_3:37038765-37038784 | Msa1287210:intron | 55.0% | |
| TGACCCCAGCCTGCAATGTT+AGG | + | chr8_3:37039461-37039480 | Msa1287210:three_prime_UTR | 55.0% | |
| TCACTCTGGTGAGGAGGCAG+TGG | + | chr8_3:37036754-37036773 | Msa1287210:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr8_3:37038719-37038738 | Msa1287210:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr8_3:37038834-37038853 | Msa1287210:intron | 60.0% |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr8_3:37038861-37038880 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr8_3:37038862-37038881 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr8_3:37038866-37038885 | Msa1287210:intron | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr8_3:37038836-37038855 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr8_3:37038849-37038868 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr8_3:37038850-37038869 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr8_3:37038849-37038868 | Msa1287210:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr8_3:37038850-37038869 | Msa1287210:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr8_3:37038867-37038886 | Msa1287210:intron | 65.0% | |
| TGAGGAGGCAGTGGCGTCGC+CGG | + | chr8_3:37036763-37036782 | Msa1287210:CDS | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr8_3:37038851-37038870 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr8_3:37038855-37038874 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr8_3:37038856-37038875 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 37035806 | 37039565 | 37035806 | ID=Msa1287210;Name=Msa1287210 |
| chr8_3 | mRNA | 37035806 | 37039565 | 37035806 | ID=Msa1287210-mRNA-1;Parent=Msa1287210;Name=Msa1287210-mRNA-1;_AED=0.06;_eAED=0.06;_QI=98|0.62|0.55|1|0.62|0.55|9|271|409 |
| chr8_3 | exon | 37035806 | 37035954 | 37035806 | ID=Msa1287210-mRNA-1:exon:10686;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37036416 | 37036480 | 37036416 | ID=Msa1287210-mRNA-1:exon:10687;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37036579 | 37036611 | 37036579 | ID=Msa1287210-mRNA-1:exon:10688;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37036712 | 37036862 | 37036712 | ID=Msa1287210-mRNA-1:exon:10689;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37036941 | 37037111 | 37036941 | ID=Msa1287210-mRNA-1:exon:10690;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37037163 | 37037392 | 37037163 | ID=Msa1287210-mRNA-1:exon:10691;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37037399 | 37037612 | 37037399 | ID=Msa1287210-mRNA-1:exon:10692;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37037946 | 37038191 | 37037946 | ID=Msa1287210-mRNA-1:exon:10693;Parent=Msa1287210-mRNA-1 |
| chr8_3 | exon | 37039226 | 37039565 | 37039226 | ID=Msa1287210-mRNA-1:exon:10694;Parent=Msa1287210-mRNA-1 |
| chr8_3 | five_prime_UTR | 37035806 | 37035903 | 37035806 | ID=Msa1287210-mRNA-1:five_prime_utr;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37035904 | 37035954 | 37035904 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37036416 | 37036480 | 37036416 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37036579 | 37036611 | 37036579 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37036712 | 37036862 | 37036712 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37036941 | 37037111 | 37036941 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37037163 | 37037392 | 37037163 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37037399 | 37037612 | 37037399 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37037946 | 37038191 | 37037946 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | CDS | 37039226 | 37039294 | 37039226 | ID=Msa1287210-mRNA-1:cds;Parent=Msa1287210-mRNA-1 |
| chr8_3 | three_prime_UTR | 37039295 | 37039565 | 37039295 | ID=Msa1287210-mRNA-1:three_prime_utr;Parent=Msa1287210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
