Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246430 | XP_013445567.1 | 86.695 | 466 | 46 | 4 | 1 | 454 | 1 | 462 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246430 | A0A072TRW5 | 86.695 | 466 | 46 | 4 | 1 | 454 | 1 | 462 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032260 | Msa1246430 | 0.800975 | 1.119648e-48 | -8.615850e-47 |
| Msa0073670 | Msa1246430 | 0.805321 | 1.412335e-49 | -8.615850e-47 |
| Msa0076000 | Msa1246430 | 0.809387 | 1.940772e-50 | -8.615850e-47 |
| Msa0082280 | Msa1246430 | 0.803299 | 3.724689e-49 | -8.615850e-47 |
| Msa0620990 | Msa1246430 | 0.800678 | 1.287920e-48 | -8.615850e-47 |
| Msa0659030 | Msa1246430 | 0.816473 | 5.430342e-52 | -8.615850e-47 |
| Msa0687630 | Msa1246430 | 0.840391 | 8.942443e-58 | -8.615850e-47 |
| Msa0703230 | Msa1246430 | 0.810187 | 1.305690e-50 | -8.615850e-47 |
| Msa0705000 | Msa1246430 | 0.815908 | 7.264756e-52 | -8.615850e-47 |
| Msa0705040 | Msa1246430 | 0.824659 | 7.160486e-54 | -8.615850e-47 |
| Msa0797750 | Msa1246430 | 0.801888 | 7.279066e-49 | -8.615850e-47 |
| Msa0174770 | Msa1246430 | 0.822979 | 1.772846e-53 | -8.615850e-47 |
| Msa0181610 | Msa1246430 | 0.809426 | 1.903442e-50 | -8.615850e-47 |
| Msa0185400 | Msa1246430 | 0.806815 | 6.848109e-50 | -8.615850e-47 |
| Msa0186890 | Msa1246430 | 0.807839 | 4.154364e-50 | -8.615850e-47 |
| Msa0187930 | Msa1246430 | 0.803404 | 3.542855e-49 | -8.615850e-47 |
| Msa0194540 | Msa1246430 | 0.804358 | 2.244619e-49 | -8.615850e-47 |
| Msa0227400 | Msa1246430 | 0.803725 | 3.039208e-49 | -8.615850e-47 |
| Msa1227690 | Msa1246430 | 0.838358 | 3.015369e-57 | -8.615850e-47 |
| Msa1246430 | Msa1254710 | 0.835269 | 1.851616e-56 | -8.615850e-47 |
| Msa1246430 | Msa1270620 | 0.823244 | 1.537819e-53 | -8.615850e-47 |
| Msa1246430 | Msa1270690 | 0.821214 | 4.547569e-53 | -8.615850e-47 |
| Msa1246430 | Msa1286510 | 0.810875 | 9.271299e-51 | -8.615850e-47 |
| Msa1246430 | Msa1287210 | 0.831159 | 1.955381e-55 | -8.615850e-47 |
| Msa1246430 | Msa1292830 | 0.803056 | 4.182422e-49 | -8.615850e-47 |
| Msa1246430 | Msa1294840 | 0.818030 | 2.424991e-52 | -8.615850e-47 |
| Msa1246430 | Msa1306990 | 0.827386 | 1.610006e-54 | -8.615850e-47 |
| Msa1246430 | Msa1307950 | 0.825574 | 4.351215e-54 | -8.615850e-47 |
| Msa1246430 | Msa1310690 | 0.818912 | 1.529914e-52 | -8.615850e-47 |
| Msa1246430 | Msa1363860 | 0.814062 | 1.865183e-51 | -8.615850e-47 |
| Msa1246430 | Msa1365150 | 0.807546 | 4.794788e-50 | -8.615850e-47 |
| Msa1246430 | Msa1370860 | 0.814077 | 1.850868e-51 | -8.615850e-47 |
| Msa1246430 | Msa1397810 | 0.800278 | 1.553293e-48 | -8.615850e-47 |
| Msa1246430 | Msa1404190 | 0.819166 | 1.339350e-52 | -8.615850e-47 |
| Msa1246430 | Msa1438640 | 0.824694 | 7.024490e-54 | -8.615850e-47 |
| Msa1246430 | Msa1442850 | 0.849133 | 3.930921e-60 | -8.615850e-47 |
| Msa1246430 | Msa1465080 | 0.836090 | 1.146878e-56 | -8.615850e-47 |
| Msa0402330 | Msa1246430 | 0.817429 | 3.312550e-52 | -8.615850e-47 |
| Msa1019240 | Msa1246430 | 0.810547 | 1.091767e-50 | -8.615850e-47 |
| Msa1019260 | Msa1246430 | 0.801687 | 8.006695e-49 | -8.615850e-47 |
| Msa0239450 | Msa1246430 | 0.812588 | 3.930621e-51 | -8.615850e-47 |
| Msa0244780 | Msa1246430 | 0.802655 | 5.060987e-49 | -8.615850e-47 |
| Msa0268130 | Msa1246430 | 0.800101 | 1.687979e-48 | -8.615850e-47 |
| Msa0291520 | Msa1246430 | 0.832966 | 6.990974e-56 | -8.615850e-47 |
| Msa0355270 | Msa1246430 | 0.811853 | 5.688672e-51 | -8.615850e-47 |
| Msa1126510 | Msa1246430 | 0.801510 | 8.701702e-49 | -8.615850e-47 |
| Msa1126770 | Msa1246430 | 0.823372 | 1.435346e-53 | -8.615850e-47 |
| Msa1127890 | Msa1246430 | 0.804487 | 2.110227e-49 | -8.615850e-47 |
| Msa1166860 | Msa1246430 | 0.800017 | 1.755202e-48 | -8.615850e-47 |
| Msa1166870 | Msa1246430 | 0.809679 | 1.679278e-50 | -8.615850e-47 |
| Msa1179950 | Msa1246430 | 0.821975 | 3.033310e-53 | -8.615850e-47 |
| Msa1179980 | Msa1246430 | 0.824457 | 7.988901e-54 | -8.615850e-47 |
| Msa1184370 | Msa1246430 | 0.834957 | 2.218944e-56 | -8.615850e-47 |
| Msa1201830 | Msa1246430 | 0.809950 | 1.468674e-50 | -8.615850e-47 |
| Msa0505150 | Msa1246430 | 0.820432 | 6.879235e-53 | -8.615850e-47 |
| Msa0541860 | Msa1246430 | 0.806023 | 1.005961e-49 | -8.615850e-47 |
| Msa0576940 | Msa1246430 | 0.802815 | 4.690016e-49 | -8.615850e-47 |
| Msa0581070 | Msa1246430 | 0.821424 | 4.066802e-53 | -8.615850e-47 |
| Msa0864010 | Msa1246430 | 0.809810 | 1.574245e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246430 | MtrunA17_Chr8g0360801 | 86.695 | 466 | 46 | 4 | 1 | 454 | 1 | 462 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTTAGGTGATAAATTT+TGG | 0.145929 | 8_2:-37704477 | Msa1246430:three_prime_UTR |
| AGTTGCCCAGTTTCAAAATA+AGG | 0.208940 | 8_2:-37704605 | Msa1246430:three_prime_UTR |
| AGGGGTCGTAAATCGTCTTC+TGG | 0.277018 | 8_2:-37706352 | Msa1246430:CDS |
| AGTTGGAAGTTCAAGTTCTA+TGG | 0.285563 | 8_2:-37706695 | Msa1246430:CDS |
| TGTACTAACTCTTGTATATA+GGG | 0.293798 | 8_2:-37704532 | Msa1246430:three_prime_UTR |
| GTGTACTAACTCTTGTATAT+AGG | 0.299171 | 8_2:-37704533 | Msa1246430:three_prime_UTR |
| AACACTACAACAACAAGAAT+TGG | 0.303709 | 8_2:-37706930 | Msa1246430:CDS |
| AAACTGGGCAACTTCTTTCC+TGG | 0.305393 | 8_2:+37704615 | None:intergenic |
| AAACTCTACCATCGGTAAAA+AGG | 0.306602 | 8_2:-37705747 | Msa1246430:CDS |
| GCTGCAAAAGAAGGATTATA+AGG | 0.311156 | 8_2:-37706620 | Msa1246430:CDS |
| TTGAAACAAGGTTCTAGTTT+TGG | 0.317988 | 8_2:-37706844 | Msa1246430:CDS |
| GACTCATTGAAGCTTTATAT+TGG | 0.320301 | 8_2:-37704559 | Msa1246430:three_prime_UTR |
| AAAGGAAAAGGAATAATAAT+AGG | 0.322246 | 8_2:-37706190 | Msa1246430:CDS |
| TGTTGGTAACATGAAGTTTA+GGG | 0.341584 | 8_2:-37706371 | Msa1246430:CDS |
| ATGTTGGTAACATGAAGTTT+AGG | 0.350395 | 8_2:-37706372 | Msa1246430:CDS |
| TTTATTCACTGTCAATTTCC+TGG | 0.361000 | 8_2:+37705694 | None:intergenic |
| AAGTTCAAGTACAATGTTAC+AGG | 0.361419 | 8_2:-37705786 | Msa1246430:CDS |
| TATAGGGTGAGTGGGTAGTA+TGG | 0.366049 | 8_2:-37704516 | Msa1246430:three_prime_UTR |
| GAAGGATTTACTTGCGGTAA+TGG | 0.378545 | 8_2:-37704676 | Msa1246430:exon |
| AATTTATCACCTAACATTGC+AGG | 0.381514 | 8_2:+37704481 | None:intergenic |
| CAGTGAGTAGTACCAGTCTT+AGG | 0.383306 | 8_2:-37706435 | Msa1246430:CDS |
| TCAGGACCAGCATAAATATA+TGG | 0.383753 | 8_2:-37706500 | Msa1246430:CDS |
| CTGCAAAAGAAGGATTATAA+GGG | 0.389107 | 8_2:-37706619 | Msa1246430:CDS |
| GTTGCCCAGTTTCAAAATAA+GGG | 0.393714 | 8_2:-37704604 | Msa1246430:three_prime_UTR |
| TGACCCCAGCCTGCAATGTT+AGG | 0.394505 | 8_2:-37704490 | Msa1246430:three_prime_UTR |
| ACACTACAACAACAAGAATT+GGG | 0.396615 | 8_2:-37706929 | Msa1246430:CDS |
| TCAATGAGTCGTGTGATATC+AGG | 0.402861 | 8_2:+37704572 | None:intergenic |
| ATCACCTAACATTGCAGGCT+GGG | 0.405445 | 8_2:+37704486 | None:intergenic |
| CGGGATCTTCATCGATCATT+GGG | 0.418179 | 8_2:-37707818 | Msa1246430:CDS |
| ATCAGCAGCTTTGACAATAC+TGG | 0.420962 | 8_2:-37705579 | Msa1246430:intron |
| AGCTGTAATGGAAGATGTCT+TGG | 0.424271 | 8_2:+37706219 | None:intergenic |
| ACGGGATCTTCATCGATCAT+TGG | 0.433678 | 8_2:-37707819 | Msa1246430:CDS |
| TCAGTTAGAAGCGTTAGTTT+TGG | 0.442082 | 8_2:-37706556 | Msa1246430:CDS |
| GGGGTCGTAAATCGTCTTCT+GGG | 0.444556 | 8_2:-37706351 | Msa1246430:CDS |
| ATCCTTCTAGCTGGATTACC+TGG | 0.444687 | 8_2:+37704692 | None:intergenic |
| AACCAGGTAATCCAGCTAGA+AGG | 0.446703 | 8_2:-37704694 | Msa1246430:CDS |
| CATCAATGTTGCAAAGTCAT+TGG | 0.449370 | 8_2:-37706158 | Msa1246430:intron |
| TGGAAGCTTCTAAGAAGAAC+GGG | 0.454842 | 8_2:-37707837 | Msa1246430:CDS |
| CGCAAGTAAATCCTTCTAGC+TGG | 0.462244 | 8_2:+37704683 | None:intergenic |
| TCCATTACAGCTGAAGGAAA+AGG | 0.468562 | 8_2:-37706208 | Msa1246430:CDS |
| CGAAAATCACAGATAAGAAC+AGG | 0.470754 | 8_2:-37706261 | Msa1246430:CDS |
| GATAAGAACAGGTGCAATCC+TGG | 0.472976 | 8_2:-37706250 | Msa1246430:CDS |
| CTTGATTTCGAGACTGAAGA+AGG | 0.477777 | 8_2:+37706958 | None:intergenic |
| TCAAATGTTAGCAGGACAAA+AGG | 0.480174 | 8_2:-37706796 | Msa1246430:CDS |
| GATGTCTTGGATTTATTACC+AGG | 0.480862 | 8_2:+37706232 | None:intergenic |
| AGAACATAATCGTCAACATA+AGG | 0.482359 | 8_2:-37705615 | Msa1246430:CDS |
| CTTGTTGAGGTGGAGAATCA+TGG | 0.486879 | 8_2:-37707857 | Msa1246430:exon |
| ACAAACTTAGCTTCATAACT+AGG | 0.487569 | 8_2:+37706301 | None:intergenic |
| ATTCTCTTTCCCCTTGTCAA+AGG | 0.493927 | 8_2:+37705721 | None:intergenic |
| AGTAGAAGCCTCAAGAGTTC+AGG | 0.496950 | 8_2:-37706518 | Msa1246430:CDS |
| TCACTCTGGTGAGGAGGCAG+TGG | 0.497952 | 8_2:-37706995 | Msa1246430:CDS |
| TTGATTGTTGAAGCTAACTC+TGG | 0.505940 | 8_2:-37707303 | Msa1246430:CDS |
| TATCACCTAACATTGCAGGC+TGG | 0.507265 | 8_2:+37704485 | None:intergenic |
| TGAGAGTATGCTGCAAAAGA+AGG | 0.508200 | 8_2:-37706629 | Msa1246430:CDS |
| TCTTCTGGGAAGTCTAGTGT+TGG | 0.508703 | 8_2:-37706337 | Msa1246430:CDS |
| ACAGCTGAAGGAAAAGGAAA+AGG | 0.511415 | 8_2:-37706202 | Msa1246430:CDS |
| ATGCTGGTCCTGAACTCTTG+AGG | 0.511672 | 8_2:+37706510 | None:intergenic |
| TGAGGAGGCAGTGGCGTCGC+CGG | 0.512983 | 8_2:-37706986 | Msa1246430:CDS |
| AAAAGTCTCAAAAGTGGAGA+TGG | 0.515736 | 8_2:-37706395 | Msa1246430:CDS |
| TGATGATGAAAAGCCACAAA+AGG | 0.516913 | 8_2:+37704408 | None:intergenic |
| AAGTCAAAATTTGCTCACTC+TGG | 0.517195 | 8_2:-37707009 | Msa1246430:CDS |
| AACAATTTGAAGCACCTATG+TGG | 0.521866 | 8_2:-37707332 | Msa1246430:CDS |
| AGTCAATGTCAAATGTTAGC+AGG | 0.523979 | 8_2:-37706804 | Msa1246430:CDS |
| GGATTATAAGGGGCATAAGA+AGG | 0.525077 | 8_2:-37706608 | Msa1246430:CDS |
| ATGAAGAAGGTGTTCTTGCA+AGG | 0.525891 | 8_2:-37705664 | Msa1246430:CDS |
| AAGGCTAGTTGCAATCTAGT+TGG | 0.526059 | 8_2:-37706712 | Msa1246430:CDS |
| ACTCGCGAGCAGACAACTGA+TGG | 0.536082 | 8_2:+37707034 | None:intergenic |
| TCACCTAACATTGCAGGCTG+GGG | 0.537633 | 8_2:+37704487 | None:intergenic |
| AACACCAAAAGTCTCAAAAG+TGG | 0.540910 | 8_2:-37706401 | Msa1246430:CDS |
| CTCTTGTATATAGGGTGAGT+GGG | 0.541586 | 8_2:-37704524 | Msa1246430:three_prime_UTR |
| TTCTCAGAGACTCGAATCGA+TGG | 0.541755 | 8_2:+37707894 | None:intergenic |
| ACATCTTCCATTACAGCTGA+AGG | 0.548952 | 8_2:-37706214 | Msa1246430:CDS |
| GGAAAAGGAATAATAATAGG+AGG | 0.550465 | 8_2:-37706187 | Msa1246430:CDS |
| CTTCTGGGAAGTCTAGTGTT+GGG | 0.550470 | 8_2:-37706336 | Msa1246430:CDS |
| AACAATCGTGTGCGAAACGA+CGG | 0.550605 | 8_2:+37707925 | None:intergenic |
| CGATTTCACAGTCCTTGTTG+AGG | 0.554771 | 8_2:-37707870 | Msa1246430:five_prime_UTR |
| TTTCACAGTCCTTGTTGAGG+TGG | 0.556296 | 8_2:-37707867 | Msa1246430:five_prime_UTR |
| ACACCTCCATATATTTATGC+TGG | 0.557766 | 8_2:+37706494 | None:intergenic |
| ATGGAAGCTTCTAAGAAGAA+CGG | 0.559243 | 8_2:-37707838 | Msa1246430:CDS |
| TCAAAAGTGGAGATGGATGT+TGG | 0.563203 | 8_2:-37706388 | Msa1246430:CDS |
| CAATGTGAGGCAAAGAAACC+AGG | 0.565344 | 8_2:-37704710 | Msa1246430:CDS |
| TCTTCAGTCTCGAAATCAAG+AGG | 0.567981 | 8_2:-37706955 | Msa1246430:CDS |
| ACTCTTGTATATAGGGTGAG+TGG | 0.571473 | 8_2:-37704525 | Msa1246430:three_prime_UTR |
| CACTACAACAACAAGAATTG+GGG | 0.577350 | 8_2:-37706928 | Msa1246430:CDS |
| AAACAGCAGGGTTTAAGCAA+GGG | 0.581786 | 8_2:-37706874 | Msa1246430:CDS |
| CAACATAAGGATGACAAAGC+AGG | 0.583166 | 8_2:-37705602 | Msa1246430:CDS |
| GTTTGTTTCAAAGCAGCAGA+GGG | 0.585395 | 8_2:-37706284 | Msa1246430:CDS |
| ATTTGCTCACTCTGGTGAGG+AGG | 0.588243 | 8_2:-37707001 | Msa1246430:CDS |
| GAGACTGAAGAAGGAAGTGC+CGG | 0.589263 | 8_2:+37706967 | None:intergenic |
| TGAAGAAGGTGTTCTTGCAA+GGG | 0.589743 | 8_2:-37705663 | Msa1246430:CDS |
| ACAATTTGAAGCACCTATGT+GGG | 0.592746 | 8_2:-37707331 | Msa1246430:CDS |
| AACAGCAGGGTTTAAGCAAG+GGG | 0.595246 | 8_2:-37706873 | Msa1246430:CDS |
| TAAACAGCAGGGTTTAAGCA+AGG | 0.595298 | 8_2:-37706875 | Msa1246430:CDS |
| ACAATCAAATCTGCCCACAT+AGG | 0.600457 | 8_2:+37707318 | None:intergenic |
| GTTGCAGAACTGATGATGAC+TGG | 0.605883 | 8_2:-37707177 | Msa1246430:intron |
| AGGGGAAAGAGAATGCTACC+AGG | 0.607255 | 8_2:-37705712 | Msa1246430:CDS |
| CATGATTCTCCACCTCAACA+AGG | 0.609741 | 8_2:+37707858 | None:intergenic |
| TGAAAGGTCTACAAGAAGCA+TGG | 0.613540 | 8_2:-37706659 | Msa1246430:CDS |
| CAGCTAGAAGGATTTACTTG+CGG | 0.614400 | 8_2:-37704682 | Msa1246430:CDS |
| AAAATTTGCTCACTCTGGTG+AGG | 0.622334 | 8_2:-37707004 | Msa1246430:CDS |
| AAGGGGAGGTGCTTGAAACA+AGG | 0.630756 | 8_2:-37706856 | Msa1246430:CDS |
| AAAAGGAGGCCTTTGACAAG+GGG | 0.632559 | 8_2:-37705730 | Msa1246430:CDS |
| GAAGAAGGTGTTCTTGCAAG+GGG | 0.643592 | 8_2:-37705662 | Msa1246430:CDS |
| AGTTCAAGTACAATGTTACA+GGG | 0.653116 | 8_2:-37705785 | Msa1246430:CDS |
| CAGGGGAAAAGCTATGTCGA+AGG | 0.653146 | 8_2:-37706731 | Msa1246430:CDS |
| TGCAAAAGAAGGATTATAAG+GGG | 0.655677 | 8_2:-37706618 | Msa1246430:CDS |
| AGCAGGGTTTAAGCAAGGGG+AGG | 0.660854 | 8_2:-37706870 | Msa1246430:CDS |
| GTTGGTAACATGAAGTTTAG+GGG | 0.667862 | 8_2:-37706370 | Msa1246430:CDS |
| AGTTTGTTTCAAAGCAGCAG+AGG | 0.674189 | 8_2:-37706285 | Msa1246430:CDS |
| GGACCAGCATAAATATATGG+AGG | 0.674367 | 8_2:-37706497 | Msa1246430:CDS |
| AAAAGTCAACGATCAATGTG+AGG | 0.680009 | 8_2:-37704723 | Msa1246430:CDS |
| ACTACAACAACAAGAATTGG+GGG | 0.688313 | 8_2:-37706927 | Msa1246430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAACAGTTATTAATTTTA+GGG | - | chr8_2:37704920-37704939 | Msa1246430:intron | 10.0% |
| !!! | TTGATTTTTTTATTTTGTTT+TGG | - | chr8_2:37705142-37705161 | Msa1246430:intron | 10.0% |
| !! | TAAACTAAAAAGTAAATTAT+AGG | + | chr8_2:37706472-37706491 | None:intergenic | 10.0% |
| !!! | TAGAATGATAATATTTTTTT+TGG | + | chr8_2:37707228-37707247 | None:intergenic | 10.0% |
| !!! | TGAAAAATTTGTTTCAATTT+AGG | - | chr8_2:37704779-37704798 | Msa1246430:intron | 15.0% |
| !!! | GAAAAATTTGTTTCAATTTA+GGG | - | chr8_2:37704780-37704799 | Msa1246430:intron | 15.0% |
| !!! | CATTAACAGTTATTAATTTT+AGG | - | chr8_2:37704919-37704938 | Msa1246430:intron | 15.0% |
| !!! | GCTATTAATTTATGTTTTTA+AGG | - | chr8_2:37704951-37704970 | Msa1246430:intron | 15.0% |
| !! | TGAATAAAGATAAAATTTGT+AGG | + | chr8_2:37706260-37706279 | None:intergenic | 15.0% |
| !!! | CATATCTAGAATTAAATATT+TGG | + | chr8_2:37707132-37707151 | None:intergenic | 15.0% |
| !! | AATTATTATCACATTATTAC+AGG | - | chr8_2:37707599-37707618 | Msa1246430:intron | 15.0% |
| !! | ATTATTATCACATTATTACA+GGG | - | chr8_2:37707600-37707619 | Msa1246430:intron | 15.0% |
| !! | AATTGAACATGTTGTAAAAT+TGG | + | chr8_2:37704896-37704915 | None:intergenic | 20.0% |
| !! | GTTGTAATTATATTACATAC+AGG | - | chr8_2:37704991-37705010 | Msa1246430:intron | 20.0% |
| !!! | TATTAATCTGAATGTTTTGT+TGG | - | chr8_2:37705447-37705466 | Msa1246430:intron | 20.0% |
| !! | TGGATAAAAAGAATTATGAA+AGG | - | chr8_2:37705671-37705690 | Msa1246430:CDS | 20.0% |
| !! | AAAGGAAAAGGAATAATAAT+AGG | - | chr8_2:37706156-37706175 | Msa1246430:intron | 20.0% |
| !! | AAGTAAATTATAGGATATCT+AGG | + | chr8_2:37706463-37706482 | None:intergenic | 20.0% |
| !! | AATAAAAATTGCAATGAAGA+AGG | - | chr8_2:37706669-37706688 | Msa1246430:CDS | 20.0% |
| !!! | TGATAATATTTTTTTTGGAC+AGG | + | chr8_2:37707223-37707242 | None:intergenic | 20.0% |
| !! | TATGAAATGTTGTCAAATAA+TGG | + | chr8_2:37707341-37707360 | None:intergenic | 20.0% |
| !! | ATTCCACATTTCACATTTTT+AGG | - | chr8_2:37704605-37704624 | Msa1246430:three_prime_UTR | 25.0% |
| !! | TTCCACATTTCACATTTTTA+GGG | - | chr8_2:37704606-37704625 | Msa1246430:three_prime_UTR | 25.0% |
| ! | ACCTAAAAACAATGTGTAAT+GGG | + | chr8_2:37704697-37704716 | None:intergenic | 25.0% |
| ! | AACCTAAAAACAATGTGTAA+TGG | + | chr8_2:37704698-37704717 | None:intergenic | 25.0% |
| !!! | ATTTTTTGGGTTTTCCATTT+TGG | - | chr8_2:37705229-37705248 | Msa1246430:intron | 25.0% |
| !!! | TTTTTTGGGTTTTCCATTTT+GGG | - | chr8_2:37705230-37705249 | Msa1246430:intron | 25.0% |
| !! | TGATGCATTTGATAATCATT+AGG | + | chr8_2:37706356-37706375 | None:intergenic | 25.0% |
| !! | TAACTGTCACTTAATACAAA+GGG | + | chr8_2:37706412-37706431 | None:intergenic | 25.0% |
| !! | ATAACTGTCACTTAATACAA+AGG | + | chr8_2:37706413-37706432 | None:intergenic | 25.0% |
| ! | AATTATAGGATATCTAGGAA+AGG | + | chr8_2:37706458-37706477 | None:intergenic | 25.0% |
| ! | AACAAAAAAAACTCTACCAT+CGG | - | chr8_2:37706591-37706610 | Msa1246430:CDS | 25.0% |
| !!! | ATTAAGTTGATCGAAAAGAT+TGG | + | chr8_2:37707088-37707107 | None:intergenic | 25.0% |
| !! | TGAATAATCACTATTTTCTG+TGG | + | chr8_2:37707376-37707395 | None:intergenic | 25.0% |
| !!! | GAGCATTGAAACAAAAAATA+AGG | + | chr8_2:37707551-37707570 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTCAATGCTCTT+TGG | - | chr8_2:37707553-37707572 | Msa1246430:intron | 25.0% |
| !! | TAATAATTATGCATTAGCCT+TGG | + | chr8_2:37707587-37707606 | None:intergenic | 25.0% |
| ! | TTTGTATTCCTCAAAAAGAA+TGG | + | chr8_2:37707707-37707726 | None:intergenic | 25.0% |
| !!! | TTTTCCCTTATTTTGAAACT+GGG | + | chr8_2:37707749-37707768 | None:intergenic | 25.0% |
| !!! | TTTTTCCCTTATTTTGAAAC+TGG | + | chr8_2:37707750-37707769 | None:intergenic | 25.0% |
| ! | TGTACTAACTCTTGTATATA+GGG | - | chr8_2:37707814-37707833 | Msa1246430:CDS | 25.0% |
| !! | CAATGTTAGGTGATAAATTT+TGG | - | chr8_2:37707869-37707888 | Msa1246430:five_prime_UTR | 25.0% |
| !! | TGCAAAAAGAATTTAAGGTT+TGG | + | chr8_2:37707915-37707934 | None:intergenic | 25.0% |
| ! | GGTAATGCAAAAAGAATTTA+AGG | + | chr8_2:37707920-37707939 | None:intergenic | 25.0% |
| AACCCTAAAAATGTGAAATG+TGG | + | chr8_2:37704611-37704630 | None:intergenic | 30.0% | |
| !! | TCCCATTACACATTGTTTTT+AGG | - | chr8_2:37704693-37704712 | Msa1246430:CDS | 30.0% |
| !!! | ACACATTGTTTTTAGGTTTC+AGG | - | chr8_2:37704700-37704719 | Msa1246430:CDS | 30.0% |
| TGAAAATATGTGAGTGAGTT+TGG | - | chr8_2:37705069-37705088 | Msa1246430:intron | 30.0% | |
| ! | TGAGTGAGTTTGGATTTTTA+TGG | - | chr8_2:37705079-37705098 | Msa1246430:intron | 30.0% |
| !!! | ATCCCTTCTGGAATATTTTT+TGG | - | chr8_2:37705215-37705234 | Msa1246430:intron | 30.0% |
| !!! | TCCCTTCTGGAATATTTTTT+GGG | - | chr8_2:37705216-37705235 | Msa1246430:intron | 30.0% |
| ACCCAAAAAATATTCCAGAA+GGG | + | chr8_2:37705220-37705239 | None:intergenic | 30.0% | |
| AACCCAAAAAATATTCCAGA+AGG | + | chr8_2:37705221-37705240 | None:intergenic | 30.0% | |
| ! | GTTGCAATCAAATCATTTTC+AGG | - | chr8_2:37705287-37705306 | Msa1246430:intron | 30.0% |
| AACACTACAACAACAAGAAT+TGG | - | chr8_2:37705416-37705435 | Msa1246430:intron | 30.0% | |
| ACACTACAACAACAAGAATT+GGG | - | chr8_2:37705417-37705436 | Msa1246430:intron | 30.0% | |
| !!! | TTGAAACAAGGTTCTAGTTT+TGG | - | chr8_2:37705502-37705521 | Msa1246430:intron | 30.0% |
| !!! | GTTCTAGTTTTGGTTATGAA+GGG | - | chr8_2:37705512-37705531 | Msa1246430:intron | 30.0% |
| AGGATTGATGAGTGAAAAAT+CGG | - | chr8_2:37705570-37705589 | Msa1246430:intron | 30.0% | |
| CTGCAAAAGAAGGATTATAA+GGG | - | chr8_2:37705727-37705746 | Msa1246430:CDS | 30.0% | |
| TGCAAAAGAAGGATTATAAG+GGG | - | chr8_2:37705728-37705747 | Msa1246430:CDS | 30.0% | |
| !! | ATGTTGGTAACATGAAGTTT+AGG | - | chr8_2:37705974-37705993 | Msa1246430:intron | 30.0% |
| !! | TGTTGGTAACATGAAGTTTA+GGG | - | chr8_2:37705975-37705994 | Msa1246430:intron | 30.0% |
| ACAAACTTAGCTTCATAACT+AGG | + | chr8_2:37706048-37706067 | None:intergenic | 30.0% | |
| GGAAAAGGAATAATAATAGG+AGG | - | chr8_2:37706159-37706178 | Msa1246430:CDS | 30.0% | |
| AAAAATGCATGACTTGAAGA+CGG | + | chr8_2:37706226-37706245 | None:intergenic | 30.0% | |
| ! | TGCATTTGATAATCATTAGG+TGG | + | chr8_2:37706353-37706372 | None:intergenic | 30.0% |
| AAGTTCAAGTACAATGTTAC+AGG | - | chr8_2:37706560-37706579 | Msa1246430:CDS | 30.0% | |
| AGTTCAAGTACAATGTTACA+GGG | - | chr8_2:37706561-37706580 | Msa1246430:CDS | 30.0% | |
| TTTATTCACTGTCAATTTCC+TGG | + | chr8_2:37706655-37706674 | None:intergenic | 30.0% | |
| AGAACATAATCGTCAACATA+AGG | - | chr8_2:37706731-37706750 | Msa1246430:CDS | 30.0% | |
| TTGGAAAGTTTACAGGATAA+TGG | + | chr8_2:37706991-37707010 | None:intergenic | 30.0% | |
| ATTATCCTGTAAACTTTCCA+AGG | - | chr8_2:37706990-37707009 | Msa1246430:CDS | 30.0% | |
| ! | CAACTTAATTTTTCTTGCCA+TGG | - | chr8_2:37707099-37707118 | Msa1246430:intron | 30.0% |
| !! | TGTACTTCAGTTTTATGACT+TGG | - | chr8_2:37707493-37707512 | Msa1246430:intron | 30.0% |
| GAAACAAAAAATAAGGCGAA+AGG | + | chr8_2:37707544-37707563 | None:intergenic | 30.0% | |
| ! | ATAGCAATCCATTCTTTTTG+AGG | - | chr8_2:37707696-37707715 | Msa1246430:intron | 30.0% |
| ! | GACTCATTGAAGCTTTATAT+TGG | - | chr8_2:37707787-37707806 | Msa1246430:intron | 30.0% |
| GTGTACTAACTCTTGTATAT+AGG | - | chr8_2:37707813-37707832 | Msa1246430:CDS | 30.0% | |
| AATTTATCACCTAACATTGC+AGG | + | chr8_2:37707868-37707887 | None:intergenic | 30.0% | |
| ! | TCTTTTTGCATTACCTTTTG+TGG | - | chr8_2:37707925-37707944 | Msa1246430:five_prime_UTR | 30.0% |
| ! | ATGGAAGCTTCTAAGAAGAA+CGG | - | chr8_2:37704508-37704527 | Msa1246430:three_prime_UTR | 35.0% |
| ! | AAGAAATGAGAAGAGAGTGT+TGG | + | chr8_2:37704566-37704585 | None:intergenic | 35.0% |
| ! | AACAATTTGAAGCACCTATG+TGG | - | chr8_2:37705014-37705033 | Msa1246430:intron | 35.0% |
| ! | ACAATTTGAAGCACCTATGT+GGG | - | chr8_2:37705015-37705034 | Msa1246430:intron | 35.0% |
| TTGATTGTTGAAGCTAACTC+TGG | - | chr8_2:37705043-37705062 | Msa1246430:intron | 35.0% | |
| TATTCCAGAAGGGATTCTTA+CGG | + | chr8_2:37705210-37705229 | None:intergenic | 35.0% | |
| ! | AAGTCAAAATTTGCTCACTC+TGG | - | chr8_2:37705337-37705356 | Msa1246430:intron | 35.0% |
| CACTACAACAACAAGAATTG+GGG | - | chr8_2:37705418-37705437 | Msa1246430:intron | 35.0% | |
| ACTACAACAACAAGAATTGG+GGG | - | chr8_2:37705419-37705438 | Msa1246430:intron | 35.0% | |
| !! | TGTTTTGTTGGATAAACAGC+AGG | - | chr8_2:37705459-37705478 | Msa1246430:intron | 35.0% |
| !! | GTTTTGTTGGATAAACAGCA+GGG | - | chr8_2:37705460-37705479 | Msa1246430:intron | 35.0% |
| !!! | GGTTCTAGTTTTGGTTATGA+AGG | - | chr8_2:37705511-37705530 | Msa1246430:intron | 35.0% |
| !!! | TAGTTTTGGTTATGAAGGGA+AGG | - | chr8_2:37705516-37705535 | Msa1246430:intron | 35.0% |
| AGTCAATGTCAAATGTTAGC+AGG | - | chr8_2:37705542-37705561 | Msa1246430:intron | 35.0% | |
| TCAAATGTTAGCAGGACAAA+AGG | - | chr8_2:37705550-37705569 | Msa1246430:intron | 35.0% | |
| GGATTGATGAGTGAAAAATC+GGG | - | chr8_2:37705571-37705590 | Msa1246430:intron | 35.0% | |
| GATTGATGAGTGAAAAATCG+GGG | - | chr8_2:37705572-37705591 | Msa1246430:intron | 35.0% | |
| ! | TGACTTTTGAACACAATACC+AGG | - | chr8_2:37705596-37705615 | Msa1246430:CDS | 35.0% |
| ! | GACTTTTGAACACAATACCA+GGG | - | chr8_2:37705597-37705616 | Msa1246430:CDS | 35.0% |
| ! | ACTTTTGAACACAATACCAG+GGG | - | chr8_2:37705598-37705617 | Msa1246430:CDS | 35.0% |
| ! | AGTTGGAAGTTCAAGTTCTA+TGG | - | chr8_2:37705651-37705670 | Msa1246430:CDS | 35.0% |
| GCTGCAAAAGAAGGATTATA+AGG | - | chr8_2:37705726-37705745 | Msa1246430:CDS | 35.0% | |
| !!! | TCAGTTAGAAGCGTTAGTTT+TGG | - | chr8_2:37705790-37705809 | Msa1246430:CDS | 35.0% |
| !!! | CAGTTAGAAGCGTTAGTTTT+GGG | - | chr8_2:37705791-37705810 | Msa1246430:CDS | 35.0% |
| TCAGGACCAGCATAAATATA+TGG | - | chr8_2:37705846-37705865 | Msa1246430:intron | 35.0% | |
| ACACCTCCATATATTTATGC+TGG | + | chr8_2:37705855-37705874 | None:intergenic | 35.0% | |
| ! | TACATGACTTTTCCTAAGAC+TGG | + | chr8_2:37705926-37705945 | None:intergenic | 35.0% |
| AACACCAAAAGTCTCAAAAG+TGG | - | chr8_2:37705945-37705964 | Msa1246430:intron | 35.0% | |
| !!! | ATCTCCACTTTTGAGACTTT+TGG | + | chr8_2:37705952-37705971 | None:intergenic | 35.0% |
| AAAAGTCTCAAAAGTGGAGA+TGG | - | chr8_2:37705951-37705970 | Msa1246430:intron | 35.0% | |
| !! | GTTGGTAACATGAAGTTTAG+GGG | - | chr8_2:37705976-37705995 | Msa1246430:intron | 35.0% |
| CGAAAATCACAGATAAGAAC+AGG | - | chr8_2:37706085-37706104 | Msa1246430:intron | 35.0% | |
| GATGTCTTGGATTTATTACC+AGG | + | chr8_2:37706117-37706136 | None:intergenic | 35.0% | |
| CATCAATGTTGCAAAGTCAT+TGG | - | chr8_2:37706188-37706207 | Msa1246430:CDS | 35.0% | |
| TCTGAATGAGTTAGCAAATC+TGG | - | chr8_2:37706282-37706301 | Msa1246430:CDS | 35.0% | |
| ! | AATGCCTGTTTTATAAGAGC+CGG | + | chr8_2:37706309-37706328 | None:intergenic | 35.0% |
| AAACTCTACCATCGGTAAAA+AGG | - | chr8_2:37706599-37706618 | Msa1246430:CDS | 35.0% | |
| GTTGCTAGACATCTCAATTA+AGG | + | chr8_2:37706930-37706949 | None:intergenic | 35.0% | |
| GAATGATTAATCACGTTCCT+TGG | + | chr8_2:37707010-37707029 | None:intergenic | 35.0% | |
| AAATATTTGGTCAGAAGCCA+TGG | + | chr8_2:37707119-37707138 | None:intergenic | 35.0% | |
| TTGTCAAATAATGGCTACTG+TGG | + | chr8_2:37707332-37707351 | None:intergenic | 35.0% | |
| TGTTGTCAAATAGCAGCTAT+AGG | + | chr8_2:37707428-37707447 | None:intergenic | 35.0% | |
| GACAACATTGTTTCAACTCA+CGG | - | chr8_2:37707441-37707460 | Msa1246430:intron | 35.0% | |
| AAAAGTCAACGATCAATGTG+AGG | - | chr8_2:37707623-37707642 | Msa1246430:intron | 35.0% | |
| TTGAGGAATACAAAAACTCC+AGG | - | chr8_2:37707713-37707732 | Msa1246430:intron | 35.0% | |
| AGTTGCCCAGTTTCAAAATA+AGG | - | chr8_2:37707741-37707760 | Msa1246430:intron | 35.0% | |
| GTTGCCCAGTTTCAAAATAA+GGG | - | chr8_2:37707742-37707761 | Msa1246430:intron | 35.0% | |
| ! | TGATGATGAAAAGCCACAAA+AGG | + | chr8_2:37707941-37707960 | None:intergenic | 35.0% |
| ! | TGGAAGCTTCTAAGAAGAAC+GGG | - | chr8_2:37704509-37704528 | Msa1246430:three_prime_UTR | 40.0% |
| CTGCAAATTTGAACGCATTG+CGG | + | chr8_2:37704864-37704883 | None:intergenic | 40.0% | |
| ACAATCAAATCTGCCCACAT+AGG | + | chr8_2:37705031-37705050 | None:intergenic | 40.0% | |
| ATTCCAGAAGGGATTCTTAC+GGG | + | chr8_2:37705209-37705228 | None:intergenic | 40.0% | |
| !!! | TGGGTTTTCCATTTTGGGTT+CGG | - | chr8_2:37705235-37705254 | Msa1246430:intron | 40.0% |
| GTAAAAACCCGAACCCAAAA+TGG | + | chr8_2:37705246-37705265 | None:intergenic | 40.0% | |
| ! | AAAATTTGCTCACTCTGGTG+AGG | - | chr8_2:37705342-37705361 | Msa1246430:intron | 40.0% |
| CTTGATTTCGAGACTGAAGA+AGG | + | chr8_2:37705391-37705410 | None:intergenic | 40.0% | |
| TCTTCAGTCTCGAAATCAAG+AGG | - | chr8_2:37705391-37705410 | Msa1246430:intron | 40.0% | |
| AACAACAAGAATTGGGGGAA+AGG | - | chr8_2:37705424-37705443 | Msa1246430:intron | 40.0% | |
| TAAACAGCAGGGTTTAAGCA+AGG | - | chr8_2:37705471-37705490 | Msa1246430:intron | 40.0% | |
| AAACAGCAGGGTTTAAGCAA+GGG | - | chr8_2:37705472-37705491 | Msa1246430:intron | 40.0% | |
| ! | AAGGCTAGTTGCAATCTAGT+TGG | - | chr8_2:37705634-37705653 | Msa1246430:CDS | 40.0% |
| TGAAAGGTCTACAAGAAGCA+TGG | - | chr8_2:37705687-37705706 | Msa1246430:CDS | 40.0% | |
| ! | TGAGAGTATGCTGCAAAAGA+AGG | - | chr8_2:37705717-37705736 | Msa1246430:CDS | 40.0% |
| ! | GGATTATAAGGGGCATAAGA+AGG | - | chr8_2:37705738-37705757 | Msa1246430:CDS | 40.0% |
| GGACCAGCATAAATATATGG+AGG | - | chr8_2:37705849-37705868 | Msa1246430:intron | 40.0% | |
| TCAAAAGTGGAGATGGATGT+TGG | - | chr8_2:37705958-37705977 | Msa1246430:intron | 40.0% | |
| ! | AGTTTGTTTCAAAGCAGCAG+AGG | - | chr8_2:37706061-37706080 | Msa1246430:intron | 40.0% |
| GTTTGTTTCAAAGCAGCAGA+GGG | - | chr8_2:37706062-37706081 | Msa1246430:intron | 40.0% | |
| ! | AGCTGTAATGGAAGATGTCT+TGG | + | chr8_2:37706130-37706149 | None:intergenic | 40.0% |
| ACATCTTCCATTACAGCTGA+AGG | - | chr8_2:37706132-37706151 | Msa1246430:intron | 40.0% | |
| TCCATTACAGCTGAAGGAAA+AGG | - | chr8_2:37706138-37706157 | Msa1246430:intron | 40.0% | |
| ! | TCCTTTTCCTTCAGCTGTAA+TGG | + | chr8_2:37706142-37706161 | None:intergenic | 40.0% |
| ACAGCTGAAGGAAAAGGAAA+AGG | - | chr8_2:37706144-37706163 | Msa1246430:intron | 40.0% | |
| ATGAGTTAGCAAATCTGGTC+CGG | - | chr8_2:37706287-37706306 | Msa1246430:CDS | 40.0% | |
| TATGTGCTTATCGAGAATGC+TGG | - | chr8_2:37706504-37706523 | Msa1246430:CDS | 40.0% | |
| ATGTGCTTATCGAGAATGCT+GGG | - | chr8_2:37706505-37706524 | Msa1246430:CDS | 40.0% | |
| ! | TGCTGGGTTTACATTTTCAC+AGG | - | chr8_2:37706521-37706540 | Msa1246430:CDS | 40.0% |
| TAAAAAGGAGGCCTTTGACA+AGG | - | chr8_2:37706614-37706633 | Msa1246430:CDS | 40.0% | |
| AAAAAGGAGGCCTTTGACAA+GGG | - | chr8_2:37706615-37706634 | Msa1246430:CDS | 40.0% | |
| ATTCTCTTTCCCCTTGTCAA+AGG | + | chr8_2:37706628-37706647 | None:intergenic | 40.0% | |
| !! | ATGAAGAAGGTGTTCTTGCA+AGG | - | chr8_2:37706682-37706701 | Msa1246430:CDS | 40.0% |
| !! | TGAAGAAGGTGTTCTTGCAA+GGG | - | chr8_2:37706683-37706702 | Msa1246430:CDS | 40.0% |
| CAACATAAGGATGACAAAGC+AGG | - | chr8_2:37706744-37706763 | Msa1246430:CDS | 40.0% | |
| ! | ATCAGCAGCTTTGACAATAC+TGG | - | chr8_2:37706767-37706786 | Msa1246430:CDS | 40.0% |
| ACGTTCCTTGGAAAGTTTAC+AGG | + | chr8_2:37706998-37707017 | None:intergenic | 40.0% | |
| AACACCTGTGTTGTCAATCA+CGG | - | chr8_2:37707253-37707272 | Msa1246430:intron | 40.0% | |
| CAGCTAGAAGGATTTACTTG+CGG | - | chr8_2:37707664-37707683 | Msa1246430:intron | 40.0% | |
| GAAGGATTTACTTGCGGTAA+TGG | - | chr8_2:37707670-37707689 | Msa1246430:intron | 40.0% | |
| TCAATGAGTCGTGTGATATC+AGG | + | chr8_2:37707777-37707796 | None:intergenic | 40.0% | |
| ACTCTTGTATATAGGGTGAG+TGG | - | chr8_2:37707821-37707840 | Msa1246430:CDS | 40.0% | |
| CTCTTGTATATAGGGTGAGT+GGG | - | chr8_2:37707822-37707841 | Msa1246430:CDS | 40.0% | |
| AACAATCGTGTGCGAAACGA+CGG | + | chr8_2:37704424-37704443 | None:intergenic | 45.0% | |
| TTCTCAGAGACTCGAATCGA+TGG | + | chr8_2:37704455-37704474 | None:intergenic | 45.0% | |
| CGATTTCACAGTCCTTGTTG+AGG | - | chr8_2:37704476-37704495 | Msa1246430:three_prime_UTR | 45.0% | |
| TTTCACAGTCCTTGTTGAGG+TGG | - | chr8_2:37704479-37704498 | Msa1246430:three_prime_UTR | 45.0% | |
| CATGATTCTCCACCTCAACA+AGG | + | chr8_2:37704491-37704510 | None:intergenic | 45.0% | |
| CTTGTTGAGGTGGAGAATCA+TGG | - | chr8_2:37704489-37704508 | Msa1246430:three_prime_UTR | 45.0% | |
| ACGGGATCTTCATCGATCAT+TGG | - | chr8_2:37704527-37704546 | Msa1246430:three_prime_UTR | 45.0% | |
| CGGGATCTTCATCGATCATT+GGG | - | chr8_2:37704528-37704547 | Msa1246430:three_prime_UTR | 45.0% | |
| ! | CATCGATCATTGGGCTTTTC+TGG | - | chr8_2:37704537-37704556 | Msa1246430:three_prime_UTR | 45.0% |
| ! | GTTGCAGAACTGATGATGAC+TGG | - | chr8_2:37705169-37705188 | Msa1246430:intron | 45.0% |
| !!! | GGGTTTTCCATTTTGGGTTC+GGG | - | chr8_2:37705236-37705255 | Msa1246430:intron | 45.0% |
| !! | GGGTTCGGGTTTTTACTGAA+TGG | - | chr8_2:37705250-37705269 | Msa1246430:intron | 45.0% |
| AACAGCAGGGTTTAAGCAAG+GGG | - | chr8_2:37705473-37705492 | Msa1246430:intron | 45.0% | |
| AGTAGAAGCCTCAAGAGTTC+AGG | - | chr8_2:37705828-37705847 | Msa1246430:intron | 45.0% | |
| CAGTGAGTAGTACCAGTCTT+AGG | - | chr8_2:37705911-37705930 | Msa1246430:intron | 45.0% | |
| ! | TCTTCTGGGAAGTCTAGTGT+TGG | - | chr8_2:37706009-37706028 | Msa1246430:intron | 45.0% |
| ! | CTTCTGGGAAGTCTAGTGTT+GGG | - | chr8_2:37706010-37706029 | Msa1246430:intron | 45.0% |
| GATAAGAACAGGTGCAATCC+TGG | - | chr8_2:37706096-37706115 | Msa1246430:intron | 45.0% | |
| TGGTCCGGCTCTTATAAAAC+AGG | - | chr8_2:37706302-37706321 | Msa1246430:CDS | 45.0% | |
| CTCTACCATCGGTAAAAAGG+AGG | - | chr8_2:37706602-37706621 | Msa1246430:CDS | 45.0% | |
| ! | AAAGGCCTCCTTTTTACCGA+TGG | + | chr8_2:37706610-37706629 | None:intergenic | 45.0% |
| AAAAGGAGGCCTTTGACAAG+GGG | - | chr8_2:37706616-37706635 | Msa1246430:CDS | 45.0% | |
| !! | GAAGAAGGTGTTCTTGCAAG+GGG | - | chr8_2:37706684-37706703 | Msa1246430:CDS | 45.0% |
| CAATCCGTGATTGACAACAC+AGG | + | chr8_2:37707260-37707279 | None:intergenic | 45.0% | |
| GCAGCAATGCTATAGTGTAG+TGG | + | chr8_2:37707403-37707422 | None:intergenic | 45.0% | |
| GCTCTTTGGCAAATCTTCCA+AGG | - | chr8_2:37707567-37707586 | Msa1246430:intron | 45.0% | |
| CAATGTGAGGCAAAGAAACC+AGG | - | chr8_2:37707636-37707655 | Msa1246430:intron | 45.0% | |
| AACCAGGTAATCCAGCTAGA+AGG | - | chr8_2:37707652-37707671 | Msa1246430:intron | 45.0% | |
| ! | ATCCTTCTAGCTGGATTACC+TGG | + | chr8_2:37707657-37707676 | None:intergenic | 45.0% |
| CGCAAGTAAATCCTTCTAGC+TGG | + | chr8_2:37707666-37707685 | None:intergenic | 45.0% | |
| AAACTGGGCAACTTCTTTCC+TGG | + | chr8_2:37707734-37707753 | None:intergenic | 45.0% | |
| TATAGGGTGAGTGGGTAGTA+TGG | - | chr8_2:37707830-37707849 | Msa1246430:CDS | 45.0% | |
| ATCACCTAACATTGCAGGCT+GGG | + | chr8_2:37707863-37707882 | None:intergenic | 45.0% | |
| TATCACCTAACATTGCAGGC+TGG | + | chr8_2:37707864-37707883 | None:intergenic | 45.0% | |
| !! | TTAAATTATAATTTAACAAA+AGG | + | chr8_2:37706962-37706981 | None:intergenic | 5.0% |
| !! | TTGTTAAATTATAATTTAAA+AGG | - | chr8_2:37706963-37706982 | Msa1246430:CDS | 5.0% |
| ATTTGCTCACTCTGGTGAGG+AGG | - | chr8_2:37705345-37705364 | Msa1246430:intron | 50.0% | |
| ! | GAGACTGAAGAAGGAAGTGC+CGG | + | chr8_2:37705382-37705401 | None:intergenic | 50.0% |
| !! | AAGGGGAGGTGCTTGAAACA+AGG | - | chr8_2:37705490-37705509 | Msa1246430:intron | 50.0% |
| ! | CTTCGACATAGCTTTTCCCC+TGG | + | chr8_2:37705617-37705636 | None:intergenic | 50.0% |
| CAGGGGAAAAGCTATGTCGA+AGG | - | chr8_2:37705615-37705634 | Msa1246430:CDS | 50.0% | |
| ATGCTGGTCCTGAACTCTTG+AGG | + | chr8_2:37705839-37705858 | None:intergenic | 50.0% | |
| AGGGGTCGTAAATCGTCTTC+TGG | - | chr8_2:37705994-37706013 | Msa1246430:intron | 50.0% | |
| GGGGTCGTAAATCGTCTTCT+GGG | - | chr8_2:37705995-37706014 | Msa1246430:intron | 50.0% | |
| AGGGGAAAGAGAATGCTACC+AGG | - | chr8_2:37706634-37706653 | Msa1246430:CDS | 50.0% | |
| TCACCTAACATTGCAGGCTG+GGG | + | chr8_2:37707862-37707881 | None:intergenic | 50.0% | |
| CCAGAAGGGATTCTTACGGG+TGG | + | chr8_2:37705206-37705225 | None:intergenic | 55.0% | |
| CCACCCGTAAGAATCCCTTC+TGG | - | chr8_2:37705203-37705222 | Msa1246430:intron | 55.0% | |
| ACTCGCGAGCAGACAACTGA+TGG | + | chr8_2:37705315-37705334 | None:intergenic | 55.0% | |
| AGCAGGGTTTAAGCAAGGGG+AGG | - | chr8_2:37705476-37705495 | Msa1246430:intron | 55.0% | |
| TGACCCCAGCCTGCAATGTT+AGG | - | chr8_2:37707856-37707875 | Msa1246430:exon | 55.0% | |
| TCACTCTGGTGAGGAGGCAG+TGG | - | chr8_2:37705351-37705370 | Msa1246430:intron | 60.0% | |
| TGAGGAGGCAGTGGCGTCGC+CGG | - | chr8_2:37705360-37705379 | Msa1246430:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 37704408 | 37707960 | 37704408 | ID=Msa1246430;Name=Msa1246430 |
| chr8_2 | mRNA | 37704408 | 37707960 | 37704408 | ID=Msa1246430-mRNA-1;Parent=Msa1246430;Name=Msa1246430-mRNA-1;_AED=0.05;_eAED=0.05;_QI=100|1|1|1|1|1|6|271|454 |
| chr8_2 | exon | 37704408 | 37704747 | 37704408 | ID=Msa1246430-mRNA-1:exon:11841;Parent=Msa1246430-mRNA-1 |
| chr8_2 | exon | 37705580 | 37705825 | 37705580 | ID=Msa1246430-mRNA-1:exon:11840;Parent=Msa1246430-mRNA-1 |
| chr8_2 | exon | 37706159 | 37707059 | 37706159 | ID=Msa1246430-mRNA-1:exon:11839;Parent=Msa1246430-mRNA-1 |
| chr8_2 | exon | 37707160 | 37707192 | 37707160 | ID=Msa1246430-mRNA-1:exon:11838;Parent=Msa1246430-mRNA-1 |
| chr8_2 | exon | 37707291 | 37707355 | 37707291 | ID=Msa1246430-mRNA-1:exon:11837;Parent=Msa1246430-mRNA-1 |
| chr8_2 | exon | 37707810 | 37707960 | 37707810 | ID=Msa1246430-mRNA-1:exon:11836;Parent=Msa1246430-mRNA-1 |
| chr8_2 | five_prime_UTR | 37707861 | 37707960 | 37707861 | ID=Msa1246430-mRNA-1:five_prime_utr;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37707810 | 37707860 | 37707810 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37707291 | 37707355 | 37707291 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37707160 | 37707192 | 37707160 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37706159 | 37707059 | 37706159 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37705580 | 37705825 | 37705580 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | CDS | 37704679 | 37704747 | 37704679 | ID=Msa1246430-mRNA-1:cds;Parent=Msa1246430-mRNA-1 |
| chr8_2 | three_prime_UTR | 37704408 | 37704678 | 37704408 | ID=Msa1246430-mRNA-1:three_prime_utr;Parent=Msa1246430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
