Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470880 | KEH35380.1 | 85.567 | 194 | 16 | 3 | 1 | 193 | 1 | 183 | 1.53e-88 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470880 | A0A072VB60 | 85.567 | 194 | 16 | 3 | 1 | 193 | 1 | 183 | 7.29e-89 | 271 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0470880 | 0.817778 | 2.763846e-52 | -8.615850e-47 |
| Msa0023330 | Msa0470880 | 0.801132 | 1.039988e-48 | -8.615850e-47 |
| Msa0024400 | Msa0470880 | 0.800095 | 1.692272e-48 | -8.615850e-47 |
| Msa0026630 | Msa0470880 | 0.812456 | 4.201602e-51 | -8.615850e-47 |
| Msa0028620 | Msa0470880 | 0.822097 | 2.842112e-53 | -8.615850e-47 |
| Msa0030160 | Msa0470880 | 0.810208 | 1.291973e-50 | -8.615850e-47 |
| Msa0030700 | Msa0470880 | 0.812153 | 4.893426e-51 | -8.615850e-47 |
| Msa0032080 | Msa0470880 | 0.846272 | 2.410130e-59 | -8.615850e-47 |
| Msa0032470 | Msa0470880 | 0.832010 | 1.206276e-55 | -8.615850e-47 |
| Msa0033850 | Msa0470880 | 0.805471 | 1.313569e-49 | -8.615850e-47 |
| Msa0052360 | Msa0470880 | 0.824001 | 1.022539e-53 | -8.615850e-47 |
| Msa0060070 | Msa0470880 | 0.810904 | 9.140823e-51 | -8.615850e-47 |
| Msa0060730 | Msa0470880 | -0.813775 | 2.157395e-51 | -8.615850e-47 |
| Msa0061500 | Msa0470880 | 0.837275 | 5.721443e-57 | -8.615850e-47 |
| Msa0071250 | Msa0470880 | 0.808257 | 3.384936e-50 | -8.615850e-47 |
| Msa0076290 | Msa0470880 | 0.817253 | 3.629901e-52 | -8.615850e-47 |
| Msa0081620 | Msa0470880 | 0.809783 | 1.595488e-50 | -8.615850e-47 |
| Msa0089730 | Msa0470880 | 0.800413 | 1.458344e-48 | -8.615850e-47 |
| Msa0090510 | Msa0470880 | 0.821293 | 4.360279e-53 | -8.615850e-47 |
| Msa0090970 | Msa0470880 | 0.801172 | 1.020547e-48 | -8.615850e-47 |
| Msa0092410 | Msa0470880 | 0.812643 | 3.824327e-51 | -8.615850e-47 |
| Msa0095940 | Msa0470880 | 0.814276 | 1.672843e-51 | -8.615850e-47 |
| Msa0097370 | Msa0470880 | 0.813206 | 2.878407e-51 | -8.615850e-47 |
| Msa0101860 | Msa0470880 | 0.802911 | 4.481369e-49 | -8.615850e-47 |
| Msa0101960 | Msa0470880 | 0.807452 | 5.019154e-50 | -8.615850e-47 |
| Msa0105410 | Msa0470880 | 0.818340 | 2.063318e-52 | -8.615850e-47 |
| Msa0106710 | Msa0470880 | 0.800739 | 1.251218e-48 | -8.615850e-47 |
| Msa0117520 | Msa0470880 | 0.851223 | 1.020777e-60 | -8.615850e-47 |
| Msa0121230 | Msa0470880 | 0.836154 | 1.104919e-56 | -8.615850e-47 |
| Msa0124320 | Msa0470880 | 0.832373 | 9.810419e-56 | -8.615850e-47 |
| Msa0125650 | Msa0470880 | 0.812224 | 4.721117e-51 | -8.615850e-47 |
| Msa0136630 | Msa0470880 | 0.827396 | 1.600749e-54 | -8.615850e-47 |
| Msa0138020 | Msa0470880 | 0.823319 | 1.476528e-53 | -8.615850e-47 |
| Msa0139550 | Msa0470880 | -0.800670 | 1.292619e-48 | -8.615850e-47 |
| Msa0144530 | Msa0470880 | 0.802196 | 6.292531e-49 | -8.615850e-47 |
| Msa0148080 | Msa0470880 | 0.800899 | 1.160557e-48 | -8.615850e-47 |
| Msa0152560 | Msa0470880 | 0.850243 | 1.925876e-60 | -8.615850e-47 |
| Msa0160960 | Msa0470880 | 0.835737 | 1.409540e-56 | -8.615850e-47 |
| Msa0172080 | Msa0470880 | 0.824693 | 7.031211e-54 | -8.615850e-47 |
| Msa0173960 | Msa0470880 | 0.805544 | 1.268021e-49 | -8.615850e-47 |
| Msa0183450 | Msa0470880 | 0.804051 | 2.599985e-49 | -8.615850e-47 |
| Msa0183910 | Msa0470880 | 0.809934 | 1.480348e-50 | -8.615850e-47 |
| Msa0186320 | Msa0470880 | 0.814211 | 1.729578e-51 | -8.615850e-47 |
| Msa0186950 | Msa0470880 | 0.826212 | 3.070695e-54 | -8.615850e-47 |
| Msa0187310 | Msa0470880 | 0.808552 | 2.927841e-50 | -8.615850e-47 |
| Msa0194920 | Msa0470880 | 0.807968 | 3.899346e-50 | -8.615850e-47 |
| Msa0204960 | Msa0470880 | 0.800034 | 1.741887e-48 | -8.615850e-47 |
| Msa0217700 | Msa0470880 | 0.823946 | 1.053444e-53 | -8.615850e-47 |
| Msa0218370 | Msa0470880 | 0.832466 | 9.302286e-56 | -8.615850e-47 |
| Msa0218460 | Msa0470880 | 0.806081 | 9.780315e-50 | -8.615850e-47 |
| Msa0219590 | Msa0470880 | 0.802120 | 6.522888e-49 | -8.615850e-47 |
| Msa0222980 | Msa0470880 | 0.803629 | 3.182314e-49 | -8.615850e-47 |
| Msa0231060 | Msa0470880 | 0.808219 | 3.448939e-50 | -8.615850e-47 |
| Msa0236420 | Msa0470880 | 0.804021 | 2.637934e-49 | -8.615850e-47 |
| Msa0364790 | Msa0470880 | 0.802383 | 5.758790e-49 | -8.615850e-47 |
| Msa0374870 | Msa0470880 | 0.876887 | 9.763900e-69 | -8.615850e-47 |
| Msa0374890 | Msa0470880 | 0.917826 | 3.306503e-86 | -8.615850e-47 |
| Msa0375070 | Msa0470880 | 0.904168 | 1.626406e-79 | -8.615850e-47 |
| Msa0382370 | Msa0470880 | 0.810686 | 1.018813e-50 | -8.615850e-47 |
| Msa0384090 | Msa0470880 | 0.803699 | 3.078004e-49 | -8.615850e-47 |
| Msa0386010 | Msa0470880 | 0.835314 | 1.803526e-56 | -8.615850e-47 |
| Msa0388730 | Msa0470880 | 0.836977 | 6.820988e-57 | -8.615850e-47 |
| Msa0389210 | Msa0470880 | 0.817036 | 4.060808e-52 | -8.615850e-47 |
| Msa0395750 | Msa0470880 | 0.821996 | 2.999159e-53 | -8.615850e-47 |
| Msa0395980 | Msa0470880 | 0.803987 | 2.681247e-49 | -8.615850e-47 |
| Msa0403470 | Msa0470880 | -0.805338 | 1.401027e-49 | -8.615850e-47 |
| Msa0403770 | Msa0470880 | 0.814117 | 1.814050e-51 | -8.615850e-47 |
| Msa0414140 | Msa0470880 | 0.816884 | 4.393854e-52 | -8.615850e-47 |
| Msa0432160 | Msa0470880 | 0.834103 | 3.637443e-56 | -8.615850e-47 |
| Msa0434540 | Msa0470880 | 0.827908 | 1.206484e-54 | -8.615850e-47 |
| Msa0440510 | Msa0470880 | 0.806712 | 7.199146e-50 | -8.615850e-47 |
| Msa0450400 | Msa0470880 | -0.811065 | 8.433439e-51 | -8.615850e-47 |
| Msa0455760 | Msa0470880 | 0.803327 | 3.675597e-49 | -8.615850e-47 |
| Msa0463270 | Msa0470880 | 0.807752 | 4.335606e-50 | -8.615850e-47 |
| Msa0470360 | Msa0470880 | 0.904814 | 8.282026e-80 | -8.615850e-47 |
| Msa0470880 | Msa0476680 | 0.837459 | 5.133335e-57 | -8.615850e-47 |
| Msa0470880 | Msa0478370 | 0.809107 | 2.227603e-50 | -8.615850e-47 |
| Msa0470880 | Msa0482940 | 0.810815 | 9.556467e-51 | -8.615850e-47 |
| Msa0470880 | Msa0484800 | 0.825429 | 4.709497e-54 | -8.615850e-47 |
| Msa0470880 | Msa0489540 | 0.810992 | 8.746347e-51 | -8.615850e-47 |
| Msa0470880 | Msa0491000 | 0.807482 | 4.946765e-50 | -8.615850e-47 |
| Msa0470880 | Msa0515340 | 0.800632 | 1.315769e-48 | -8.615850e-47 |
| Msa0470880 | Msa0519160 | 0.805303 | 1.424624e-49 | -8.615850e-47 |
| Msa0470880 | Msa0521010 | 0.839983 | 1.143262e-57 | -8.615850e-47 |
| Msa0470880 | Msa0522500 | 0.813289 | 2.759869e-51 | -8.615850e-47 |
| Msa0470880 | Msa0527540 | 0.821196 | 4.590754e-53 | -8.615850e-47 |
| Msa0470880 | Msa0534870 | 0.812168 | 4.854854e-51 | -8.615850e-47 |
| Msa0470880 | Msa0542560 | 0.806633 | 7.482418e-50 | -8.615850e-47 |
| Msa0470880 | Msa0545050 | 0.882056 | 1.433694e-70 | -8.615850e-47 |
| Msa0470880 | Msa0549890 | 0.841453 | 4.710109e-58 | -8.615850e-47 |
| Msa0470880 | Msa0562570 | 0.800641 | 1.310176e-48 | -8.615850e-47 |
| Msa0470880 | Msa0566350 | 0.834226 | 3.387278e-56 | -8.615850e-47 |
| Msa0470880 | Msa0566750 | 0.834224 | 3.392209e-56 | -8.615850e-47 |
| Msa0470880 | Msa0567520 | 0.810333 | 1.214494e-50 | -8.615850e-47 |
| Msa0470880 | Msa0574930 | 0.819766 | 9.773657e-53 | -8.615850e-47 |
| Msa0470880 | Msa0581400 | 0.814134 | 1.797860e-51 | -8.615850e-47 |
| Msa0470880 | Msa0587120 | 0.808185 | 3.506336e-50 | -8.615850e-47 |
| Msa0470880 | Msa0600080 | 0.805152 | 1.532053e-49 | -8.615850e-47 |
| Msa0470880 | Msa0600590 | 0.873019 | 2.032483e-67 | -8.615850e-47 |
| Msa0470880 | Msa0604290 | 0.814259 | 1.687382e-51 | -8.615850e-47 |
| Msa0470880 | Msa0613110 | 0.824052 | 9.943677e-54 | -8.615850e-47 |
| Msa0470880 | Msa0613340 | 0.823550 | 1.304190e-53 | -8.615850e-47 |
| Msa0470880 | Msa0613420 | 0.807507 | 4.887005e-50 | -8.615850e-47 |
| Msa0470880 | Msa0623990 | 0.810350 | 1.204361e-50 | -8.615850e-47 |
| Msa0470880 | Msa0624060 | 0.826820 | 2.198658e-54 | -8.615850e-47 |
| Msa0470880 | Msa0629240 | 0.827522 | 1.493875e-54 | -8.615850e-47 |
| Msa0470880 | Msa0641130 | 0.874344 | 7.266945e-68 | -8.615850e-47 |
| Msa0470880 | Msa0646240 | 0.803630 | 3.180930e-49 | -8.615850e-47 |
| Msa0470880 | Msa0651560 | 0.810075 | 1.380309e-50 | -8.615850e-47 |
| Msa0470880 | Msa0657930 | -0.800267 | 1.561765e-48 | -8.615850e-47 |
| Msa0470880 | Msa0661720 | 0.822195 | 2.697300e-53 | -8.615850e-47 |
| Msa0470880 | Msa0673120 | 0.825002 | 5.941854e-54 | -8.615850e-47 |
| Msa0470880 | Msa0676130 | 0.822488 | 2.306684e-53 | -8.615850e-47 |
| Msa0470880 | Msa0676180 | 0.825598 | 4.294833e-54 | -8.615850e-47 |
| Msa0470880 | Msa0679670 | 0.819734 | 9.939758e-53 | -8.615850e-47 |
| Msa0470880 | Msa0689250 | 0.807730 | 4.381498e-50 | -8.615850e-47 |
| Msa0470880 | Msa0694740 | 0.822704 | 2.053971e-53 | -8.615850e-47 |
| Msa0470880 | Msa0697590 | 0.803473 | 3.428045e-49 | -8.615850e-47 |
| Msa0470880 | Msa0703810 | 0.841636 | 4.214921e-58 | -8.615850e-47 |
| Msa0470880 | Msa0711150 | 0.809937 | 1.478178e-50 | -8.615850e-47 |
| Msa0470880 | Msa0733010 | 0.832648 | 8.386904e-56 | -8.615850e-47 |
| Msa0470880 | Msa0738030 | 0.832414 | 9.585199e-56 | -8.615850e-47 |
| Msa0470880 | Msa0741440 | 0.813439 | 2.558277e-51 | -8.615850e-47 |
| Msa0470880 | Msa0743930 | 0.817365 | 3.425411e-52 | -8.615850e-47 |
| Msa0470880 | Msa0746210 | 0.801569 | 8.462591e-49 | -8.615850e-47 |
| Msa0470880 | Msa0750810 | 0.828414 | 9.109347e-55 | -8.615850e-47 |
| Msa0470880 | Msa0750850 | 0.832147 | 1.115580e-55 | -8.615850e-47 |
| Msa0470880 | Msa0756380 | 0.819376 | 1.200009e-52 | -8.615850e-47 |
| Msa0470880 | Msa0772280 | 0.805975 | 1.029835e-49 | -8.615850e-47 |
| Msa0470880 | Msa0779510 | 0.814033 | 1.893217e-51 | -8.615850e-47 |
| Msa0470880 | Msa0784480 | 0.822377 | 2.447532e-53 | -8.615850e-47 |
| Msa0470880 | Msa0795340 | 0.812819 | 3.499034e-51 | -8.615850e-47 |
| Msa0470880 | Msa0816130 | 0.823693 | 1.207046e-53 | -8.615850e-47 |
| Msa0470880 | Msa0818060 | 0.818146 | 2.282669e-52 | -8.615850e-47 |
| Msa0470880 | Msa0822500 | 0.839273 | 1.748313e-57 | -8.615850e-47 |
| Msa0470880 | Msa0823540 | 0.817731 | 2.832553e-52 | -8.615850e-47 |
| Msa0470880 | Msa0830230 | 0.807587 | 4.699878e-50 | -8.615850e-47 |
| Msa0470880 | Msa0833270 | 0.819822 | 9.492338e-53 | -8.615850e-47 |
| Msa0470880 | Msa0846860 | 0.821331 | 4.273025e-53 | -8.615850e-47 |
| Msa0470880 | Msa0857940 | 0.826983 | 2.010822e-54 | -8.615850e-47 |
| Msa0470880 | Msa0861470 | 0.805481 | 1.307192e-49 | -8.615850e-47 |
| Msa0470880 | Msa0870510 | 0.820507 | 6.615130e-53 | -8.615850e-47 |
| Msa0470880 | Msa0878220 | 0.868199 | 7.798901e-66 | -8.615850e-47 |
| Msa0470880 | Msa0880810 | 0.845186 | 4.751562e-59 | -8.615850e-47 |
| Msa0470880 | Msa0894710 | 0.856474 | 3.138866e-62 | -8.615850e-47 |
| Msa0470880 | Msa0899970 | 0.833149 | 6.296077e-56 | -8.615850e-47 |
| Msa0470880 | Msa0902830 | 0.815015 | 1.147738e-51 | -8.615850e-47 |
| Msa0470880 | Msa0910620 | 0.840624 | 7.771772e-58 | -8.615850e-47 |
| Msa0470880 | Msa0921420 | 0.819328 | 1.230179e-52 | -8.615850e-47 |
| Msa0470880 | Msa0943970 | 0.868628 | 5.666959e-66 | -8.615850e-47 |
| Msa0470880 | Msa0944020 | 0.867980 | 9.167243e-66 | -8.615850e-47 |
| Msa0470880 | Msa0960390 | 0.811460 | 6.923229e-51 | -8.615850e-47 |
| Msa0470880 | Msa0965080 | 0.827016 | 1.974604e-54 | -8.615850e-47 |
| Msa0470880 | Msa0965290 | 0.845218 | 4.658727e-59 | -8.615850e-47 |
| Msa0470880 | Msa0975320 | 0.803918 | 2.771989e-49 | -8.615850e-47 |
| Msa0470880 | Msa0985180 | 0.826012 | 3.426669e-54 | -8.615850e-47 |
| Msa0470880 | Msa0992510 | 0.801809 | 7.557690e-49 | -8.615850e-47 |
| Msa0470880 | Msa0994910 | 0.826062 | 3.333519e-54 | -8.615850e-47 |
| Msa0470880 | Msa0999680 | 0.846213 | 2.501894e-59 | -8.615850e-47 |
| Msa0470880 | Msa1011250 | 0.800695 | 1.277410e-48 | -8.615850e-47 |
| Msa0470880 | Msa1012800 | 0.803536 | 3.327414e-49 | -8.615850e-47 |
| Msa0470880 | Msa1023310 | 0.813319 | 2.718011e-51 | -8.615850e-47 |
| Msa0470880 | Msa1024680 | 0.831377 | 1.728101e-55 | -8.615850e-47 |
| Msa0470880 | Msa1026640 | 0.820628 | 6.203485e-53 | -8.615850e-47 |
| Msa0470880 | Msa1037520 | 0.808932 | 2.428464e-50 | -8.615850e-47 |
| Msa0470880 | Msa1062040 | 0.818736 | 1.677211e-52 | -8.615850e-47 |
| Msa0470880 | Msa1063360 | 0.841222 | 5.415203e-58 | -8.615850e-47 |
| Msa0470880 | Msa1063400 | 0.811391 | 7.168676e-51 | -8.615850e-47 |
| Msa0470880 | Msa1063420 | 0.812976 | 3.233028e-51 | -8.615850e-47 |
| Msa0470880 | Msa1070540 | 0.809214 | 2.113504e-50 | -8.615850e-47 |
| Msa0470880 | Msa1071320 | 0.801714 | 7.902860e-49 | -8.615850e-47 |
| Msa0470880 | Msa1080140 | 0.805298 | 1.427854e-49 | -8.615850e-47 |
| Msa0470880 | Msa1081790 | -0.804877 | 1.749593e-49 | -8.615850e-47 |
| Msa0470880 | Msa1089460 | 0.807751 | 4.338446e-50 | -8.615850e-47 |
| Msa0470880 | Msa1096070 | 0.827755 | 1.312729e-54 | -8.615850e-47 |
| Msa0470880 | Msa1101240 | 0.807157 | 5.797821e-50 | -8.615850e-47 |
| Msa0470880 | Msa1107200 | 0.842777 | 2.102075e-58 | -8.615850e-47 |
| Msa0470880 | Msa1108710 | 0.823455 | 1.372740e-53 | -8.615850e-47 |
| Msa0470880 | Msa1122150 | 0.835943 | 1.249676e-56 | -8.615850e-47 |
| Msa0470880 | Msa1129330 | 0.802866 | 4.578297e-49 | -8.615850e-47 |
| Msa0470880 | Msa1137780 | 0.825910 | 3.623395e-54 | -8.615850e-47 |
| Msa0470880 | Msa1140630 | 0.828829 | 7.232951e-55 | -8.615850e-47 |
| Msa0470880 | Msa1150780 | 0.824099 | 9.695057e-54 | -8.615850e-47 |
| Msa0470880 | Msa1160560 | 0.841637 | 4.211196e-58 | -8.615850e-47 |
| Msa0470880 | Msa1173490 | 0.815068 | 1.117035e-51 | -8.615850e-47 |
| Msa0470880 | Msa1184690 | 0.847496 | 1.114620e-59 | -8.615850e-47 |
| Msa0470880 | Msa1190100 | -0.816725 | 4.769361e-52 | -8.615850e-47 |
| Msa0470880 | Msa1196610 | -0.802669 | 5.026658e-49 | -8.615850e-47 |
| Msa0470880 | Msa1207310 | 0.818568 | 1.831452e-52 | -8.615850e-47 |
| Msa0470880 | Msa1208990 | 0.807034 | 6.156859e-50 | -8.615850e-47 |
| Msa0470880 | Msa1212050 | 0.825427 | 4.714668e-54 | -8.615850e-47 |
| Msa0470880 | Msa1212130 | 0.819620 | 1.055345e-52 | -8.615850e-47 |
| Msa0470880 | Msa1213890 | 0.830583 | 2.705645e-55 | -8.615850e-47 |
| Msa0470880 | Msa1214170 | 0.847024 | 1.501647e-59 | -8.615850e-47 |
| Msa0470880 | Msa1214750 | 0.822272 | 2.587969e-53 | -8.615850e-47 |
| Msa0470880 | Msa1218580 | 0.843092 | 1.732896e-58 | -8.615850e-47 |
| Msa0470880 | Msa1221330 | 0.822654 | 2.110308e-53 | -8.615850e-47 |
| Msa0470880 | Msa1225600 | 0.804429 | 2.169109e-49 | -8.615850e-47 |
| Msa0470880 | Msa1232700 | 0.815570 | 8.642035e-52 | -8.615850e-47 |
| Msa0470880 | Msa1236440 | 0.842290 | 2.830838e-58 | -8.615850e-47 |
| Msa0470880 | Msa1238600 | 0.852731 | 3.809424e-61 | -8.615850e-47 |
| Msa0470880 | Msa1238660 | 0.817425 | 3.319405e-52 | -8.615850e-47 |
| Msa0470880 | Msa1240970 | 0.803065 | 4.164489e-49 | -8.615850e-47 |
| Msa0470880 | Msa1246360 | 0.802401 | 5.709610e-49 | -8.615850e-47 |
| Msa0470880 | Msa1256060 | 0.804687 | 1.916361e-49 | -8.615850e-47 |
| Msa0470880 | Msa1259860 | 0.835371 | 1.744640e-56 | -8.615850e-47 |
| Msa0470880 | Msa1260680 | 0.808282 | 3.343332e-50 | -8.615850e-47 |
| Msa0470880 | Msa1271130 | 0.831798 | 1.360527e-55 | -8.615850e-47 |
| Msa0470880 | Msa1272010 | 0.834916 | 2.272075e-56 | -8.615850e-47 |
| Msa0470880 | Msa1276150 | 0.801438 | 9.002404e-49 | -8.615850e-47 |
| Msa0470880 | Msa1277670 | 0.840034 | 1.108349e-57 | -8.615850e-47 |
| Msa0470880 | Msa1296260 | 0.806441 | 8.213163e-50 | -8.615850e-47 |
| Msa0470880 | Msa1307180 | 0.809228 | 2.098554e-50 | -8.615850e-47 |
| Msa0470880 | Msa1315580 | 0.802735 | 4.872584e-49 | -8.615850e-47 |
| Msa0470880 | Msa1316360 | 0.812584 | 3.940096e-51 | -8.615850e-47 |
| Msa0470880 | Msa1319560 | 0.832242 | 1.057260e-55 | -8.615850e-47 |
| Msa0470880 | Msa1325410 | -0.829623 | 4.642411e-55 | -8.615850e-47 |
| Msa0470880 | Msa1329200 | 0.807650 | 4.556908e-50 | -8.615850e-47 |
| Msa0470880 | Msa1330920 | 0.810241 | 1.271042e-50 | -8.615850e-47 |
| Msa0470880 | Msa1331760 | 0.801868 | 7.348142e-49 | -8.615850e-47 |
| Msa0470880 | Msa1345940 | 0.809637 | 1.714801e-50 | -8.615850e-47 |
| Msa0470880 | Msa1346840 | 0.819233 | 1.293062e-52 | -8.615850e-47 |
| Msa0470880 | Msa1349450 | 0.801487 | 8.798524e-49 | -8.615850e-47 |
| Msa0470880 | Msa1355180 | 0.811243 | 7.717683e-51 | -8.615850e-47 |
| Msa0470880 | Msa1355890 | 0.832636 | 8.442429e-56 | -8.615850e-47 |
| Msa0470880 | Msa1356000 | 0.807766 | 4.304932e-50 | -8.615850e-47 |
| Msa0470880 | Msa1357560 | 0.800934 | 1.141460e-48 | -8.615850e-47 |
| Msa0470880 | Msa1360020 | 0.849396 | 3.322885e-60 | -8.615850e-47 |
| Msa0470880 | Msa1369920 | -0.857386 | 1.691171e-62 | -8.615850e-47 |
| Msa0470880 | Msa1370590 | 0.806964 | 6.368245e-50 | -8.615850e-47 |
| Msa0470880 | Msa1378410 | 0.830391 | 3.015326e-55 | -8.615850e-47 |
| Msa0470880 | Msa1380220 | 0.807719 | 4.405649e-50 | -8.615850e-47 |
| Msa0470880 | Msa1384100 | 0.811514 | 6.740244e-51 | -8.615850e-47 |
| Msa0470880 | Msa1386890 | 0.831944 | 1.252280e-55 | -8.615850e-47 |
| Msa0470880 | Msa1392210 | 0.800006 | 1.764627e-48 | -8.615850e-47 |
| Msa0470880 | Msa1394380 | 0.809163 | 2.167151e-50 | -8.615850e-47 |
| Msa0470880 | Msa1401990 | 0.814945 | 1.189862e-51 | -8.615850e-47 |
| Msa0470880 | Msa1407760 | 0.853254 | 2.697972e-61 | -8.615850e-47 |
| Msa0470880 | Msa1410550 | 0.828714 | 7.710943e-55 | -8.615850e-47 |
| Msa0470880 | Msa1418970 | 0.802157 | 6.409938e-49 | -8.615850e-47 |
| Msa0470880 | Msa1419690 | 0.838443 | 2.866898e-57 | -8.615850e-47 |
| Msa0470880 | Msa1419840 | 0.854139 | 1.501593e-61 | -8.615850e-47 |
| Msa0470880 | Msa1425260 | 0.803080 | 4.134580e-49 | -8.615850e-47 |
| Msa0470880 | Msa1428780 | 0.806275 | 8.903947e-50 | -8.615850e-47 |
| Msa0470880 | Msa1430550 | 0.820663 | 6.088798e-53 | -8.615850e-47 |
| Msa0470880 | Msa1432130 | 0.802020 | 6.837631e-49 | -8.615850e-47 |
| Msa0470880 | Msa1436600 | 0.836867 | 7.276562e-57 | -8.615850e-47 |
| Msa0470880 | Msa1437730 | 0.867104 | 1.749922e-65 | -8.615850e-47 |
| Msa0470880 | Msa1442790 | 0.801030 | 1.091174e-48 | -8.615850e-47 |
| Msa0470880 | Msa1442920 | 0.853246 | 2.712951e-61 | -8.615850e-47 |
| Msa0470880 | Msa1444120 | 0.819514 | 1.115792e-52 | -8.615850e-47 |
| Msa0470880 | Msa1446080 | 0.806249 | 9.017309e-50 | -8.615850e-47 |
| Msa0470880 | Msa1450440 | 0.855110 | 7.861213e-62 | -8.615850e-47 |
| Msa0470880 | Msa1452710 | 0.809455 | 1.876180e-50 | -8.615850e-47 |
| Msa0470880 | Msa1458680 | 0.841566 | 4.395479e-58 | -8.615850e-47 |
| Msa0240270 | Msa0470880 | 0.814194 | 1.744320e-51 | -8.615850e-47 |
| Msa0240900 | Msa0470880 | 0.800667 | 1.294150e-48 | -8.615850e-47 |
| Msa0241140 | Msa0470880 | 0.832835 | 7.533464e-56 | -8.615850e-47 |
| Msa0259680 | Msa0470880 | 0.800650 | 1.304916e-48 | -8.615850e-47 |
| Msa0264310 | Msa0470880 | 0.801202 | 1.006432e-48 | -8.615850e-47 |
| Msa0267790 | Msa0470880 | 0.806237 | 9.068110e-50 | -8.615850e-47 |
| Msa0269560 | Msa0470880 | 0.831999 | 1.214083e-55 | -8.615850e-47 |
| Msa0271540 | Msa0470880 | 0.811622 | 6.385224e-51 | -8.615850e-47 |
| Msa0277960 | Msa0470880 | 0.805085 | 1.582957e-49 | -8.615850e-47 |
| Msa0278580 | Msa0470880 | 0.815397 | 9.438473e-52 | -8.615850e-47 |
| Msa0287870 | Msa0470880 | 0.842461 | 2.549752e-58 | -8.615850e-47 |
| Msa0299660 | Msa0470880 | 0.819146 | 1.353352e-52 | -8.615850e-47 |
| Msa0317970 | Msa0470880 | 0.804087 | 2.556455e-49 | -8.615850e-47 |
| Msa0319260 | Msa0470880 | 0.802692 | 4.972788e-49 | -8.615850e-47 |
| Msa0341480 | Msa0470880 | 0.805436 | 1.336133e-49 | -8.615850e-47 |
| Msa0347750 | Msa0470880 | 0.816923 | 4.306044e-52 | -8.615850e-47 |
| Msa0363790 | Msa0470880 | 0.809615 | 1.733457e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470880 | MtrunA17_Chr3g0125561 | 84.536 | 194 | 18 | 3 | 1 | 193 | 31 | 213 | 3.53e-92 | 271 |
| Msa0470880 | MtrunA17_Chr1g0159571 | 42.788 | 208 | 84 | 8 | 1 | 190 | 1 | 191 | 2.93e-30 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470880 | AT1G21390.1 | 43.537 | 147 | 54 | 5 | 59 | 191 | 52 | 183 | 1.52e-17 | 78.6 |
| Msa0470880 | AT1G76980.1 | 41.463 | 164 | 62 | 7 | 50 | 191 | 33 | 184 | 1.53e-16 | 76.3 |
| Msa0470880 | AT1G76980.2 | 41.463 | 164 | 62 | 7 | 50 | 191 | 33 | 184 | 1.98e-16 | 75.9 |
Find 61 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATTAGACAACTTTGCTTC+TGG | 0.302671 | 3_3:-73083282 | Msa0470880:three_prime_UTR |
| ATTTCTGATGGACCAGTAAA+AGG | 0.323657 | 3_3:-73084141 | Msa0470880:intron |
| ATGGCCTCTGTTCTTGAAAC+AGG | 0.336109 | 3_3:+73084504 | None:intergenic |
| TACAAATCAAAAGAATTCTT+AGG | 0.338959 | 3_3:+73084663 | None:intergenic |
| ACAAATATCATCATGTTTGA+TGG | 0.338979 | 3_3:-73083226 | Msa0470880:three_prime_UTR |
| GAAAGTTCATAGTTTGATTC+GGG | 0.347032 | 3_3:+73084438 | None:intergenic |
| CCAGAGATTATTAGAATTTG+TGG | 0.349920 | 3_3:+73084611 | None:intergenic |
| TGAAAGTTCATAGTTTGATT+CGG | 0.368860 | 3_3:+73084437 | None:intergenic |
| TTCTTTATATGTTTATTTGA+AGG | 0.375267 | 3_3:-73083151 | None:intergenic |
| GCAGAAGGAGGAGGAGGAGA+AGG | 0.389816 | 3_3:-73084361 | Msa0470880:CDS |
| GCCTTCAACACAGCCTCAAT+TGG | 0.391567 | 3_3:-73084589 | Msa0470880:CDS |
| GGCTTCCCATGTTTCATGTC+TGG | 0.393616 | 3_3:+73084632 | None:intergenic |
| AAACTATGAACTTTCATTGA+AGG | 0.394782 | 3_3:-73084430 | Msa0470880:CDS |
| ACTGGTCCATCAGAAATTGA+TGG | 0.402064 | 3_3:+73084147 | None:intergenic |
| AAGAATTCTAGTGTCTATAA+TGG | 0.423589 | 3_3:-73084327 | Msa0470880:CDS |
| AGCAAAGTTGTCTAATTCAA+TGG | 0.432684 | 3_3:+73083287 | None:intergenic |
| ATCACGATGAACAACCTAGA+TGG | 0.455248 | 3_3:-73084560 | Msa0470880:CDS |
| CCACAAATTCTAATAATCTC+TGG | 0.468437 | 3_3:-73084611 | Msa0470880:CDS |
| ATATCATCATGTTTGATGGC+AGG | 0.478880 | 3_3:-73083222 | Msa0470880:three_prime_UTR |
| GGAGGAGGAGGAGAAGGAGA+AGG | 0.482742 | 3_3:-73084355 | Msa0470880:CDS |
| AAGAACTCATGGAAATGGTT+CGG | 0.483414 | 3_3:-73084467 | Msa0470880:CDS |
| AGAAAATACAGAGGAGCAGA+AGG | 0.490882 | 3_3:-73084376 | Msa0470880:CDS |
| AGAGGAGCAGAAGGAGGAGG+AGG | 0.512087 | 3_3:-73084367 | Msa0470880:CDS |
| CCATCAGAAATTGATGGTCT+TGG | 0.516641 | 3_3:+73084153 | None:intergenic |
| TCCAATTGAGGCTGTGTTGA+AGG | 0.516902 | 3_3:+73084588 | None:intergenic |
| GGTGAGTTCACACTCCATCT+AGG | 0.517049 | 3_3:+73084546 | None:intergenic |
| ATCTTGTGGAACACCACCAC+AGG | 0.517846 | 3_3:-73084407 | Msa0470880:CDS |
| ATAGTACTTTGTTTCATCAA+AGG | 0.520728 | 3_3:+73083430 | None:intergenic |
| ATCATGTTTGATGGCAGGGA+TGG | 0.523525 | 3_3:-73083217 | Msa0470880:three_prime_UTR |
| ACTTTCATTGAAGGATCTTG+TGG | 0.526030 | 3_3:-73084421 | Msa0470880:CDS |
| TTACAAAGTTTGGATTGGCA+TGG | 0.529260 | 3_3:+73083188 | None:intergenic |
| TACAGAGGAGCAGAAGGAGG+AGG | 0.532433 | 3_3:-73084370 | Msa0470880:CDS |
| AATCAAAAGAATTCTTAGGT+TGG | 0.534469 | 3_3:+73084667 | None:intergenic |
| CCAAGACCATCAATTTCTGA+TGG | 0.535937 | 3_3:-73084153 | Msa0470880:CDS |
| CAAAAGAATTCTTAGGTTGG+TGG | 0.537203 | 3_3:+73084670 | None:intergenic |
| TATCATCATGTTTGATGGCA+GGG | 0.537572 | 3_3:-73083221 | Msa0470880:three_prime_UTR |
| CGAGGTTTCTACCTGAAAGT+GGG | 0.539143 | 3_3:-73084240 | Msa0470880:CDS |
| TTTCTTCTCTGGTCCTGTGG+TGG | 0.548885 | 3_3:+73084394 | None:intergenic |
| TCATGTTTGATGGCAGGGAT+GGG | 0.551420 | 3_3:-73083216 | Msa0470880:three_prime_UTR |
| CAAGAAGATTGATTATAAGA+AGG | 0.554086 | 3_3:-73084301 | Msa0470880:CDS |
| GGGAAAATTGATCGTGATCG+AGG | 0.558249 | 3_3:-73084258 | Msa0470880:CDS |
| CTGTTCTTGAAACAGGGGAA+AGG | 0.560820 | 3_3:+73084511 | None:intergenic |
| TCGAGGTTTCTACCTGAAAG+TGG | 0.562734 | 3_3:-73084241 | Msa0470880:CDS |
| AGAAAGGTGGAGGTATATGC+TGG | 0.563507 | 3_3:-73083505 | Msa0470880:CDS |
| TCGTGATACATGTCCAATTG+AGG | 0.569340 | 3_3:+73084576 | None:intergenic |
| TGCAGGCGTGAGAAAGGTGG+AGG | 0.582682 | 3_3:-73083515 | Msa0470880:intron |
| ATGAAATGCAGGCGTGAGAA+AGG | 0.589952 | 3_3:-73083521 | Msa0470880:intron |
| AAATGCAGGCGTGAGAAAGG+TGG | 0.592081 | 3_3:-73083518 | Msa0470880:intron |
| TGTTTGATGGCAGGGATGGG+AGG | 0.595005 | 3_3:-73083213 | Msa0470880:three_prime_UTR |
| TGGCCTCTGTTCTTGAAACA+GGG | 0.597218 | 3_3:+73084505 | None:intergenic |
| ATGTGATTTCATCATAGTCA+TGG | 0.597220 | 3_3:-73083409 | Msa0470880:three_prime_UTR |
| ATGAAACCAGACATGAAACA+TGG | 0.602607 | 3_3:-73084638 | Msa0470880:CDS |
| AGAACAGAGGCCATAGTGAG+AGG | 0.606015 | 3_3:-73084495 | Msa0470880:CDS |
| AATTCTAGTGTCTATAATGG+TGG | 0.616757 | 3_3:-73084324 | Msa0470880:CDS |
| TTCCCCTGTTTCAAGAACAG+AGG | 0.619257 | 3_3:-73084508 | Msa0470880:CDS |
| GGGGAAAGGCTTCTGTAATG+TGG | 0.623224 | 3_3:+73084525 | None:intergenic |
| AAATACAGAGGAGCAGAAGG+AGG | 0.627616 | 3_3:-73084373 | Msa0470880:CDS |
| GGCCTCTGTTCTTGAAACAG+GGG | 0.643547 | 3_3:+73084506 | None:intergenic |
| GAGGTTTCTACCTGAAAGTG+GGG | 0.662564 | 3_3:-73084239 | Msa0470880:CDS |
| TGAAACCAGACATGAAACAT+GGG | 0.668487 | 3_3:-73084637 | Msa0470880:CDS |
| GACCAGAGAAGAAAATACAG+AGG | 0.687498 | 3_3:-73084385 | Msa0470880:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTAATTAATTTGAAGTT+GGG | + | chr3_3:73083918-73083937 | None:intergenic | 15.0% |
| !!! | TATGTTAATTAATTTGAAGT+TGG | + | chr3_3:73083919-73083938 | None:intergenic | 15.0% |
| !!! | TTCAAATTTATTTGTTTCTT+AGG | - | chr3_3:73084048-73084067 | Msa0470880:intron | 15.0% |
| !!! | TACTTTTTTATTTGGATTTT+GGG | + | chr3_3:73084382-73084401 | None:intergenic | 15.0% |
| !!! | TTACTTTTTTATTTGGATTT+TGG | + | chr3_3:73084383-73084402 | None:intergenic | 15.0% |
| !!! | TGATCTTTTACTTTTTTATT+TGG | + | chr3_3:73084390-73084409 | None:intergenic | 15.0% |
| !!! | ATGTTAATTAATTTGAAGTT+GGG | + | chr3_3:73083918-73083937 | None:intergenic | 15.0% |
| !!! | TATGTTAATTAATTTGAAGT+TGG | + | chr3_3:73083919-73083938 | None:intergenic | 15.0% |
| !!! | TTCAAATTTATTTGTTTCTT+AGG | - | chr3_3:73084048-73084067 | Msa0470880:intron | 15.0% |
| !!! | TACTTTTTTATTTGGATTTT+GGG | + | chr3_3:73084382-73084401 | None:intergenic | 15.0% |
| !!! | TTACTTTTTTATTTGGATTT+TGG | + | chr3_3:73084383-73084402 | None:intergenic | 15.0% |
| !!! | TGATCTTTTACTTTTTTATT+TGG | + | chr3_3:73084390-73084409 | None:intergenic | 15.0% |
| !! | TACAAATCAAAAGAATTCTT+AGG | + | chr3_3:73083186-73083205 | None:intergenic | 20.0% |
| !! | TTAGATCCTAAAGAAAAAAA+AGG | + | chr3_3:73083636-73083655 | None:intergenic | 20.0% |
| !! | TAACAAAAATTTCATGTTCA+TGG | - | chr3_3:73084116-73084135 | Msa0470880:intron | 20.0% |
| !!! | AAGAAAATAACTCTTGTTAT+TGG | - | chr3_3:73084232-73084251 | Msa0470880:CDS | 20.0% |
| !!! | TGTCTTTTTGCTTATATTTA+AGG | - | chr3_3:73084275-73084294 | Msa0470880:CDS | 20.0% |
| !!! | ATAGAGTACTAATTAACTTT+TGG | - | chr3_3:73084302-73084321 | Msa0470880:CDS | 20.0% |
| !! | AAAAATTACAAAGTTTGGAT+TGG | + | chr3_3:73084666-73084685 | None:intergenic | 20.0% |
| !! | ATGTCAAAAATTACAAAGTT+TGG | + | chr3_3:73084671-73084690 | None:intergenic | 20.0% |
| !! | TACAAATCAAAAGAATTCTT+AGG | + | chr3_3:73083186-73083205 | None:intergenic | 20.0% |
| !! | TTAGATCCTAAAGAAAAAAA+AGG | + | chr3_3:73083636-73083655 | None:intergenic | 20.0% |
| !! | TAACAAAAATTTCATGTTCA+TGG | - | chr3_3:73084116-73084135 | Msa0470880:intron | 20.0% |
| !!! | AAGAAAATAACTCTTGTTAT+TGG | - | chr3_3:73084232-73084251 | Msa0470880:CDS | 20.0% |
| !!! | TGTCTTTTTGCTTATATTTA+AGG | - | chr3_3:73084275-73084294 | Msa0470880:CDS | 20.0% |
| !!! | ATAGAGTACTAATTAACTTT+TGG | - | chr3_3:73084302-73084321 | Msa0470880:CDS | 20.0% |
| !! | AAAAATTACAAAGTTTGGAT+TGG | + | chr3_3:73084666-73084685 | None:intergenic | 20.0% |
| !! | ATGTCAAAAATTACAAAGTT+TGG | + | chr3_3:73084671-73084690 | None:intergenic | 20.0% |
| ! | AATCAAAAGAATTCTTAGGT+TGG | + | chr3_3:73083182-73083201 | None:intergenic | 25.0% |
| ! | TGAAAGTTCATAGTTTGATT+CGG | + | chr3_3:73083412-73083431 | None:intergenic | 25.0% |
| ! | AAACTATGAACTTTCATTGA+AGG | - | chr3_3:73083416-73083435 | Msa0470880:three_prime_UTR | 25.0% |
| ! | AAGAATTCTAGTGTCTATAA+TGG | - | chr3_3:73083519-73083538 | Msa0470880:intron | 25.0% |
| ! | CAAGAAGATTGATTATAAGA+AGG | - | chr3_3:73083545-73083564 | Msa0470880:intron | 25.0% |
| ! | TACATGTGAAGAAAAATGAT+GGG | - | chr3_3:73083568-73083587 | Msa0470880:intron | 25.0% |
| ! | AGAGAAAAAGAAGAAGAAAA+AGG | - | chr3_3:73083656-73083675 | Msa0470880:intron | 25.0% |
| !!! | ATGTATAGTTGATTAGTTTC+TGG | - | chr3_3:73083941-73083960 | Msa0470880:intron | 25.0% |
| !! | ACATTTTTATGCTTCTTTAG+AGG | - | chr3_3:73084150-73084169 | Msa0470880:CDS | 25.0% |
| ! | TAAGCAAAAAGACATGTATT+TGG | + | chr3_3:73084269-73084288 | None:intergenic | 25.0% |
| !! | ATAGTACTTTGTTTCATCAA+AGG | + | chr3_3:73084419-73084438 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTGTTCTCAGA+TGG | + | chr3_3:73084502-73084521 | None:intergenic | 25.0% |
| ! | GAGTTACTAAAAAATGTGTA+AGG | - | chr3_3:73084586-73084605 | Msa0470880:CDS | 25.0% |
| ! | ACAAATATCATCATGTTTGA+TGG | - | chr3_3:73084620-73084639 | Msa0470880:CDS | 25.0% |
| ! | AATCAAAAGAATTCTTAGGT+TGG | + | chr3_3:73083182-73083201 | None:intergenic | 25.0% |
| ! | TGAAAGTTCATAGTTTGATT+CGG | + | chr3_3:73083412-73083431 | None:intergenic | 25.0% |
| ! | AAACTATGAACTTTCATTGA+AGG | - | chr3_3:73083416-73083435 | Msa0470880:three_prime_UTR | 25.0% |
| ! | AAGAATTCTAGTGTCTATAA+TGG | - | chr3_3:73083519-73083538 | Msa0470880:intron | 25.0% |
| ! | CAAGAAGATTGATTATAAGA+AGG | - | chr3_3:73083545-73083564 | Msa0470880:intron | 25.0% |
| ! | TACATGTGAAGAAAAATGAT+GGG | - | chr3_3:73083568-73083587 | Msa0470880:intron | 25.0% |
| ! | AGAGAAAAAGAAGAAGAAAA+AGG | - | chr3_3:73083656-73083675 | Msa0470880:intron | 25.0% |
| !!! | ATGTATAGTTGATTAGTTTC+TGG | - | chr3_3:73083941-73083960 | Msa0470880:intron | 25.0% |
| !! | ACATTTTTATGCTTCTTTAG+AGG | - | chr3_3:73084150-73084169 | Msa0470880:CDS | 25.0% |
| ! | TAAGCAAAAAGACATGTATT+TGG | + | chr3_3:73084269-73084288 | None:intergenic | 25.0% |
| !! | ATAGTACTTTGTTTCATCAA+AGG | + | chr3_3:73084419-73084438 | None:intergenic | 25.0% |
| ! | AAAAAAAAGTTGTTCTCAGA+TGG | + | chr3_3:73084502-73084521 | None:intergenic | 25.0% |
| ! | GAGTTACTAAAAAATGTGTA+AGG | - | chr3_3:73084586-73084605 | Msa0470880:CDS | 25.0% |
| ! | ACAAATATCATCATGTTTGA+TGG | - | chr3_3:73084620-73084639 | Msa0470880:CDS | 25.0% |
| CCAGAGATTATTAGAATTTG+TGG | + | chr3_3:73083238-73083257 | None:intergenic | 30.0% | |
| CCACAAATTCTAATAATCTC+TGG | - | chr3_3:73083235-73083254 | Msa0470880:three_prime_UTR | 30.0% | |
| ACAAAAAGAACTCATGGAAA+TGG | - | chr3_3:73083374-73083393 | Msa0470880:three_prime_UTR | 30.0% | |
| GAAAGTTCATAGTTTGATTC+GGG | + | chr3_3:73083411-73083430 | None:intergenic | 30.0% | |
| AATTCTAGTGTCTATAATGG+TGG | - | chr3_3:73083522-73083541 | Msa0470880:intron | 30.0% | |
| GTACATGTGAAGAAAAATGA+TGG | - | chr3_3:73083567-73083586 | Msa0470880:intron | 30.0% | |
| !!! | GGGTTACCTTTTTTTTCTTT+AGG | - | chr3_3:73083627-73083646 | Msa0470880:intron | 30.0% |
| TCACTCTCTTTATAAACAGA+AGG | + | chr3_3:73083768-73083787 | None:intergenic | 30.0% | |
| AATTTAAACCAAACAGCCAA+AGG | + | chr3_3:73083980-73083999 | None:intergenic | 30.0% | |
| AATTTCATGTTCATGGTTGT+TGG | - | chr3_3:73084123-73084142 | Msa0470880:intron | 30.0% | |
| AAATTCTCCAAATCCAACAT+GGG | + | chr3_3:73084211-73084230 | None:intergenic | 30.0% | |
| AAAATTCTCCAAATCCAACA+TGG | + | chr3_3:73084212-73084231 | None:intergenic | 30.0% | |
| ! | TTAACTTTTGGATGAAATGC+AGG | - | chr3_3:73084314-73084333 | Msa0470880:CDS | 30.0% |
| ATGTGATTTCATCATAGTCA+TGG | - | chr3_3:73084437-73084456 | Msa0470880:CDS | 30.0% | |
| AGCAAAGTTGTCTAATTCAA+TGG | + | chr3_3:73084562-73084581 | None:intergenic | 30.0% | |
| CCAGAGATTATTAGAATTTG+TGG | + | chr3_3:73083238-73083257 | None:intergenic | 30.0% | |
| CCACAAATTCTAATAATCTC+TGG | - | chr3_3:73083235-73083254 | Msa0470880:three_prime_UTR | 30.0% | |
| ACAAAAAGAACTCATGGAAA+TGG | - | chr3_3:73083374-73083393 | Msa0470880:three_prime_UTR | 30.0% | |
| GAAAGTTCATAGTTTGATTC+GGG | + | chr3_3:73083411-73083430 | None:intergenic | 30.0% | |
| AATTCTAGTGTCTATAATGG+TGG | - | chr3_3:73083522-73083541 | Msa0470880:intron | 30.0% | |
| GTACATGTGAAGAAAAATGA+TGG | - | chr3_3:73083567-73083586 | Msa0470880:intron | 30.0% | |
| !!! | GGGTTACCTTTTTTTTCTTT+AGG | - | chr3_3:73083627-73083646 | Msa0470880:intron | 30.0% |
| TCACTCTCTTTATAAACAGA+AGG | + | chr3_3:73083768-73083787 | None:intergenic | 30.0% | |
| AATTTAAACCAAACAGCCAA+AGG | + | chr3_3:73083980-73083999 | None:intergenic | 30.0% | |
| AATTTCATGTTCATGGTTGT+TGG | - | chr3_3:73084123-73084142 | Msa0470880:intron | 30.0% | |
| AAATTCTCCAAATCCAACAT+GGG | + | chr3_3:73084211-73084230 | None:intergenic | 30.0% | |
| AAAATTCTCCAAATCCAACA+TGG | + | chr3_3:73084212-73084231 | None:intergenic | 30.0% | |
| ! | TTAACTTTTGGATGAAATGC+AGG | - | chr3_3:73084314-73084333 | Msa0470880:CDS | 30.0% |
| ATGTGATTTCATCATAGTCA+TGG | - | chr3_3:73084437-73084456 | Msa0470880:CDS | 30.0% | |
| AGCAAAGTTGTCTAATTCAA+TGG | + | chr3_3:73084562-73084581 | None:intergenic | 30.0% | |
| !! | CAAAAGAATTCTTAGGTTGG+TGG | + | chr3_3:73083179-73083198 | None:intergenic | 35.0% |
| ATGAAACCAGACATGAAACA+TGG | - | chr3_3:73083208-73083227 | Msa0470880:three_prime_UTR | 35.0% | |
| TGAAACCAGACATGAAACAT+GGG | - | chr3_3:73083209-73083228 | Msa0470880:three_prime_UTR | 35.0% | |
| ! | TTCTTTTTGTCCTCTCACTA+TGG | + | chr3_3:73083364-73083383 | None:intergenic | 35.0% |
| AAGAACTCATGGAAATGGTT+CGG | - | chr3_3:73083379-73083398 | Msa0470880:three_prime_UTR | 35.0% | |
| ACTTTCATTGAAGGATCTTG+TGG | - | chr3_3:73083425-73083444 | Msa0470880:three_prime_UTR | 35.0% | |
| ! | ATTTCTGATGGACCAGTAAA+AGG | - | chr3_3:73083705-73083724 | Msa0470880:intron | 35.0% |
| !! | TTGATTAGTTTCTGGCTAGT+GGG | - | chr3_3:73083949-73083968 | Msa0470880:intron | 35.0% |
| GTTCAAATCAAATCCCATGT+TGG | - | chr3_3:73084174-73084193 | Msa0470880:CDS | 35.0% | |
| AATCAAATCCCATGTTGGAT+TGG | - | chr3_3:73084179-73084198 | Msa0470880:CDS | 35.0% | |
| ATCAAATCCCATGTTGGATT+GGG | - | chr3_3:73084180-73084199 | Msa0470880:CDS | 35.0% | |
| !!! | ATTTTGGGTTTGCGAAACAA+AGG | + | chr3_3:73084367-73084386 | None:intergenic | 35.0% |
| GAATTAGACAACTTTGCTTC+TGG | - | chr3_3:73084564-73084583 | Msa0470880:CDS | 35.0% | |
| ! | ATATCATCATGTTTGATGGC+AGG | - | chr3_3:73084624-73084643 | Msa0470880:CDS | 35.0% |
| ! | TATCATCATGTTTGATGGCA+GGG | - | chr3_3:73084625-73084644 | Msa0470880:CDS | 35.0% |
| !! | TTACAAAGTTTGGATTGGCA+TGG | + | chr3_3:73084661-73084680 | None:intergenic | 35.0% |
| !! | CAAAAGAATTCTTAGGTTGG+TGG | + | chr3_3:73083179-73083198 | None:intergenic | 35.0% |
| ATGAAACCAGACATGAAACA+TGG | - | chr3_3:73083208-73083227 | Msa0470880:three_prime_UTR | 35.0% | |
| TGAAACCAGACATGAAACAT+GGG | - | chr3_3:73083209-73083228 | Msa0470880:three_prime_UTR | 35.0% | |
| ! | TTCTTTTTGTCCTCTCACTA+TGG | + | chr3_3:73083364-73083383 | None:intergenic | 35.0% |
| AAGAACTCATGGAAATGGTT+CGG | - | chr3_3:73083379-73083398 | Msa0470880:three_prime_UTR | 35.0% | |
| ACTTTCATTGAAGGATCTTG+TGG | - | chr3_3:73083425-73083444 | Msa0470880:three_prime_UTR | 35.0% | |
| ! | ATTTCTGATGGACCAGTAAA+AGG | - | chr3_3:73083705-73083724 | Msa0470880:intron | 35.0% |
| !! | TTGATTAGTTTCTGGCTAGT+GGG | - | chr3_3:73083949-73083968 | Msa0470880:intron | 35.0% |
| GTTCAAATCAAATCCCATGT+TGG | - | chr3_3:73084174-73084193 | Msa0470880:CDS | 35.0% | |
| AATCAAATCCCATGTTGGAT+TGG | - | chr3_3:73084179-73084198 | Msa0470880:CDS | 35.0% | |
| ATCAAATCCCATGTTGGATT+GGG | - | chr3_3:73084180-73084199 | Msa0470880:CDS | 35.0% | |
| !!! | ATTTTGGGTTTGCGAAACAA+AGG | + | chr3_3:73084367-73084386 | None:intergenic | 35.0% |
| GAATTAGACAACTTTGCTTC+TGG | - | chr3_3:73084564-73084583 | Msa0470880:CDS | 35.0% | |
| ! | ATATCATCATGTTTGATGGC+AGG | - | chr3_3:73084624-73084643 | Msa0470880:CDS | 35.0% |
| ! | TATCATCATGTTTGATGGCA+GGG | - | chr3_3:73084625-73084644 | Msa0470880:CDS | 35.0% |
| !! | TTACAAAGTTTGGATTGGCA+TGG | + | chr3_3:73084661-73084680 | None:intergenic | 35.0% |
| TCGTGATACATGTCCAATTG+AGG | + | chr3_3:73083273-73083292 | None:intergenic | 40.0% | |
| ATCACGATGAACAACCTAGA+TGG | - | chr3_3:73083286-73083305 | Msa0470880:three_prime_UTR | 40.0% | |
| GAGAGGACAAAAAGAACTCA+TGG | - | chr3_3:73083368-73083387 | Msa0470880:three_prime_UTR | 40.0% | |
| ! | TATTTTCTTCTCTGGTCCTG+TGG | + | chr3_3:73083458-73083477 | None:intergenic | 40.0% |
| GACCAGAGAAGAAAATACAG+AGG | - | chr3_3:73083461-73083480 | Msa0470880:exon | 40.0% | |
| ! | CTCCTCTGTATTTTCTTCTC+TGG | + | chr3_3:73083466-73083485 | None:intergenic | 40.0% |
| AGAAAATACAGAGGAGCAGA+AGG | - | chr3_3:73083470-73083489 | Msa0470880:exon | 40.0% | |
| AAAAAGGTAACCCCACTTTC+AGG | + | chr3_3:73083620-73083639 | None:intergenic | 40.0% | |
| ! | CCATCAGAAATTGATGGTCT+TGG | + | chr3_3:73083696-73083715 | None:intergenic | 40.0% |
| CCAAGACCATCAATTTCTGA+TGG | - | chr3_3:73083693-73083712 | Msa0470880:intron | 40.0% | |
| ACTGGTCCATCAGAAATTGA+TGG | + | chr3_3:73083702-73083721 | None:intergenic | 40.0% | |
| ! | TTATCAGCAGCACCTTTTAC+TGG | + | chr3_3:73083720-73083739 | None:intergenic | 40.0% |
| !! | AGTAAAAGGTGCTGCTGATA+AGG | - | chr3_3:73083719-73083738 | Msa0470880:intron | 40.0% |
| CTGCTGATAAGGAAAAAGAG+TGG | - | chr3_3:73083730-73083749 | Msa0470880:intron | 40.0% | |
| CTGATAAGGAAAAAGAGTGG+TGG | - | chr3_3:73083733-73083752 | Msa0470880:intron | 40.0% | |
| GACTAAGAAGCAATAGCATC+AGG | - | chr3_3:73083883-73083902 | Msa0470880:intron | 40.0% | |
| !! | GTTGATTAGTTTCTGGCTAG+TGG | - | chr3_3:73083948-73083967 | Msa0470880:intron | 40.0% |
| TCGTGATACATGTCCAATTG+AGG | + | chr3_3:73083273-73083292 | None:intergenic | 40.0% | |
| ATCACGATGAACAACCTAGA+TGG | - | chr3_3:73083286-73083305 | Msa0470880:three_prime_UTR | 40.0% | |
| GAGAGGACAAAAAGAACTCA+TGG | - | chr3_3:73083368-73083387 | Msa0470880:three_prime_UTR | 40.0% | |
| ! | TATTTTCTTCTCTGGTCCTG+TGG | + | chr3_3:73083458-73083477 | None:intergenic | 40.0% |
| GACCAGAGAAGAAAATACAG+AGG | - | chr3_3:73083461-73083480 | Msa0470880:exon | 40.0% | |
| ! | CTCCTCTGTATTTTCTTCTC+TGG | + | chr3_3:73083466-73083485 | None:intergenic | 40.0% |
| AGAAAATACAGAGGAGCAGA+AGG | - | chr3_3:73083470-73083489 | Msa0470880:exon | 40.0% | |
| AAAAAGGTAACCCCACTTTC+AGG | + | chr3_3:73083620-73083639 | None:intergenic | 40.0% | |
| ! | CCATCAGAAATTGATGGTCT+TGG | + | chr3_3:73083696-73083715 | None:intergenic | 40.0% |
| CCAAGACCATCAATTTCTGA+TGG | - | chr3_3:73083693-73083712 | Msa0470880:intron | 40.0% | |
| ACTGGTCCATCAGAAATTGA+TGG | + | chr3_3:73083702-73083721 | None:intergenic | 40.0% | |
| ! | TTATCAGCAGCACCTTTTAC+TGG | + | chr3_3:73083720-73083739 | None:intergenic | 40.0% |
| !! | AGTAAAAGGTGCTGCTGATA+AGG | - | chr3_3:73083719-73083738 | Msa0470880:intron | 40.0% |
| CTGCTGATAAGGAAAAAGAG+TGG | - | chr3_3:73083730-73083749 | Msa0470880:intron | 40.0% | |
| CTGATAAGGAAAAAGAGTGG+TGG | - | chr3_3:73083733-73083752 | Msa0470880:intron | 40.0% | |
| GACTAAGAAGCAATAGCATC+AGG | - | chr3_3:73083883-73083902 | Msa0470880:intron | 40.0% | |
| !! | GTTGATTAGTTTCTGGCTAG+TGG | - | chr3_3:73083948-73083967 | Msa0470880:intron | 40.0% |
| !!! | GGTTGGTGGTGTTTTCTTGT+TGG | + | chr3_3:73083165-73083184 | None:intergenic | 45.0% |
| TCCAATTGAGGCTGTGTTGA+AGG | + | chr3_3:73083261-73083280 | None:intergenic | 45.0% | |
| CTGTTCTTGAAACAGGGGAA+AGG | + | chr3_3:73083338-73083357 | None:intergenic | 45.0% | |
| TTCCCCTGTTTCAAGAACAG+AGG | - | chr3_3:73083338-73083357 | Msa0470880:three_prime_UTR | 45.0% | |
| TGGCCTCTGTTCTTGAAACA+GGG | + | chr3_3:73083344-73083363 | None:intergenic | 45.0% | |
| ATGGCCTCTGTTCTTGAAAC+AGG | + | chr3_3:73083345-73083364 | None:intergenic | 45.0% | |
| AAATACAGAGGAGCAGAAGG+AGG | - | chr3_3:73083473-73083492 | Msa0470880:exon | 45.0% | |
| GGGAAAATTGATCGTGATCG+AGG | - | chr3_3:73083588-73083607 | Msa0470880:intron | 45.0% | |
| TCGAGGTTTCTACCTGAAAG+TGG | - | chr3_3:73083605-73083624 | Msa0470880:intron | 45.0% | |
| CGAGGTTTCTACCTGAAAGT+GGG | - | chr3_3:73083606-73083625 | Msa0470880:intron | 45.0% | |
| GAGGTTTCTACCTGAAAGTG+GGG | - | chr3_3:73083607-73083626 | Msa0470880:intron | 45.0% | |
| GGATTCTCCCAATCCAACAT+GGG | + | chr3_3:73084190-73084209 | None:intergenic | 45.0% | |
| GGAGAATCCCATGTTGGATT+TGG | - | chr3_3:73084201-73084220 | Msa0470880:CDS | 45.0% | |
| ATGAAATGCAGGCGTGAGAA+AGG | - | chr3_3:73084325-73084344 | Msa0470880:CDS | 45.0% | |
| ! | AGAAAGGTGGAGGTATATGC+TGG | - | chr3_3:73084341-73084360 | Msa0470880:CDS | 45.0% |
| ! | ATCATGTTTGATGGCAGGGA+TGG | - | chr3_3:73084629-73084648 | Msa0470880:CDS | 45.0% |
| ! | TCATGTTTGATGGCAGGGAT+GGG | - | chr3_3:73084630-73084649 | Msa0470880:CDS | 45.0% |
| !!! | GGTTGGTGGTGTTTTCTTGT+TGG | + | chr3_3:73083165-73083184 | None:intergenic | 45.0% |
| TCCAATTGAGGCTGTGTTGA+AGG | + | chr3_3:73083261-73083280 | None:intergenic | 45.0% | |
| CTGTTCTTGAAACAGGGGAA+AGG | + | chr3_3:73083338-73083357 | None:intergenic | 45.0% | |
| TTCCCCTGTTTCAAGAACAG+AGG | - | chr3_3:73083338-73083357 | Msa0470880:three_prime_UTR | 45.0% | |
| TGGCCTCTGTTCTTGAAACA+GGG | + | chr3_3:73083344-73083363 | None:intergenic | 45.0% | |
| ATGGCCTCTGTTCTTGAAAC+AGG | + | chr3_3:73083345-73083364 | None:intergenic | 45.0% | |
| AAATACAGAGGAGCAGAAGG+AGG | - | chr3_3:73083473-73083492 | Msa0470880:exon | 45.0% | |
| GGGAAAATTGATCGTGATCG+AGG | - | chr3_3:73083588-73083607 | Msa0470880:intron | 45.0% | |
| TCGAGGTTTCTACCTGAAAG+TGG | - | chr3_3:73083605-73083624 | Msa0470880:intron | 45.0% | |
| CGAGGTTTCTACCTGAAAGT+GGG | - | chr3_3:73083606-73083625 | Msa0470880:intron | 45.0% | |
| GAGGTTTCTACCTGAAAGTG+GGG | - | chr3_3:73083607-73083626 | Msa0470880:intron | 45.0% | |
| GGATTCTCCCAATCCAACAT+GGG | + | chr3_3:73084190-73084209 | None:intergenic | 45.0% | |
| GGAGAATCCCATGTTGGATT+TGG | - | chr3_3:73084201-73084220 | Msa0470880:CDS | 45.0% | |
| ATGAAATGCAGGCGTGAGAA+AGG | - | chr3_3:73084325-73084344 | Msa0470880:CDS | 45.0% | |
| ! | AGAAAGGTGGAGGTATATGC+TGG | - | chr3_3:73084341-73084360 | Msa0470880:CDS | 45.0% |
| ! | ATCATGTTTGATGGCAGGGA+TGG | - | chr3_3:73084629-73084648 | Msa0470880:CDS | 45.0% |
| ! | TCATGTTTGATGGCAGGGAT+GGG | - | chr3_3:73084630-73084649 | Msa0470880:CDS | 45.0% |
| GGCTTCCCATGTTTCATGTC+TGG | + | chr3_3:73083217-73083236 | None:intergenic | 50.0% | |
| GCCTTCAACACAGCCTCAAT+TGG | - | chr3_3:73083257-73083276 | Msa0470880:three_prime_UTR | 50.0% | |
| GGTGAGTTCACACTCCATCT+AGG | + | chr3_3:73083303-73083322 | None:intergenic | 50.0% | |
| GGGGAAAGGCTTCTGTAATG+TGG | + | chr3_3:73083324-73083343 | None:intergenic | 50.0% | |
| GGCCTCTGTTCTTGAAACAG+GGG | + | chr3_3:73083343-73083362 | None:intergenic | 50.0% | |
| AGAACAGAGGCCATAGTGAG+AGG | - | chr3_3:73083351-73083370 | Msa0470880:three_prime_UTR | 50.0% | |
| ATCTTGTGGAACACCACCAC+AGG | - | chr3_3:73083439-73083458 | Msa0470880:three_prime_UTR | 50.0% | |
| TTTCTTCTCTGGTCCTGTGG+TGG | + | chr3_3:73083455-73083474 | None:intergenic | 50.0% | |
| GCATCGAGCAGCAACAGTAA+TGG | - | chr3_3:73083801-73083820 | Msa0470880:intron | 50.0% | |
| !! | TGGCTAGTGGGTTCTTCCTT+TGG | - | chr3_3:73083961-73083980 | Msa0470880:intron | 50.0% |
| GGGTTCTTCCTTTGGCTGTT+TGG | - | chr3_3:73083969-73083988 | Msa0470880:intron | 50.0% | |
| GGGATTCTCCCAATCCAACA+TGG | + | chr3_3:73084191-73084210 | None:intergenic | 50.0% | |
| GGATTGGGAGAATCCCATGT+TGG | - | chr3_3:73084195-73084214 | Msa0470880:CDS | 50.0% | |
| AAATGCAGGCGTGAGAAAGG+TGG | - | chr3_3:73084328-73084347 | Msa0470880:CDS | 50.0% | |
| GGCTTCCCATGTTTCATGTC+TGG | + | chr3_3:73083217-73083236 | None:intergenic | 50.0% | |
| GCCTTCAACACAGCCTCAAT+TGG | - | chr3_3:73083257-73083276 | Msa0470880:three_prime_UTR | 50.0% | |
| GGTGAGTTCACACTCCATCT+AGG | + | chr3_3:73083303-73083322 | None:intergenic | 50.0% | |
| GGGGAAAGGCTTCTGTAATG+TGG | + | chr3_3:73083324-73083343 | None:intergenic | 50.0% | |
| GGCCTCTGTTCTTGAAACAG+GGG | + | chr3_3:73083343-73083362 | None:intergenic | 50.0% | |
| AGAACAGAGGCCATAGTGAG+AGG | - | chr3_3:73083351-73083370 | Msa0470880:three_prime_UTR | 50.0% | |
| ATCTTGTGGAACACCACCAC+AGG | - | chr3_3:73083439-73083458 | Msa0470880:three_prime_UTR | 50.0% | |
| TTTCTTCTCTGGTCCTGTGG+TGG | + | chr3_3:73083455-73083474 | None:intergenic | 50.0% | |
| GCATCGAGCAGCAACAGTAA+TGG | - | chr3_3:73083801-73083820 | Msa0470880:intron | 50.0% | |
| !! | TGGCTAGTGGGTTCTTCCTT+TGG | - | chr3_3:73083961-73083980 | Msa0470880:intron | 50.0% |
| GGGTTCTTCCTTTGGCTGTT+TGG | - | chr3_3:73083969-73083988 | Msa0470880:intron | 50.0% | |
| GGGATTCTCCCAATCCAACA+TGG | + | chr3_3:73084191-73084210 | None:intergenic | 50.0% | |
| GGATTGGGAGAATCCCATGT+TGG | - | chr3_3:73084195-73084214 | Msa0470880:CDS | 50.0% | |
| AAATGCAGGCGTGAGAAAGG+TGG | - | chr3_3:73084328-73084347 | Msa0470880:CDS | 50.0% | |
| TACAGAGGAGCAGAAGGAGG+AGG | - | chr3_3:73083476-73083495 | Msa0470880:CDS | 55.0% | |
| ! | TGTTTGATGGCAGGGATGGG+AGG | - | chr3_3:73084633-73084652 | Msa0470880:CDS | 55.0% |
| TACAGAGGAGCAGAAGGAGG+AGG | - | chr3_3:73083476-73083495 | Msa0470880:CDS | 55.0% | |
| ! | TGTTTGATGGCAGGGATGGG+AGG | - | chr3_3:73084633-73084652 | Msa0470880:CDS | 55.0% |
| AGAGGAGCAGAAGGAGGAGG+AGG | - | chr3_3:73083479-73083498 | Msa0470880:CDS | 60.0% | |
| GCAGAAGGAGGAGGAGGAGA+AGG | - | chr3_3:73083485-73083504 | Msa0470880:CDS | 60.0% | |
| GGAGGAGGAGGAGAAGGAGA+AGG | - | chr3_3:73083491-73083510 | Msa0470880:CDS | 60.0% | |
| TGCAGGCGTGAGAAAGGTGG+AGG | - | chr3_3:73084331-73084350 | Msa0470880:CDS | 60.0% | |
| AGAGGAGCAGAAGGAGGAGG+AGG | - | chr3_3:73083479-73083498 | Msa0470880:CDS | 60.0% | |
| GCAGAAGGAGGAGGAGGAGA+AGG | - | chr3_3:73083485-73083504 | Msa0470880:CDS | 60.0% | |
| GGAGGAGGAGGAGAAGGAGA+AGG | - | chr3_3:73083491-73083510 | Msa0470880:CDS | 60.0% | |
| TGCAGGCGTGAGAAAGGTGG+AGG | - | chr3_3:73084331-73084350 | Msa0470880:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 73083153 | 73084715 | 73083153 | ID=Msa0470880;Name=Msa0470880 |
| chr3_3 | mRNA | 73083153 | 73084715 | 73083153 | ID=Msa0470880-mRNA-1;Parent=Msa0470880;Name=Msa0470880-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0.5|1|0|1|2|321|210 |
| chr3_3 | exon | 73083153 | 73083532 | 73083153 | ID=Msa0470880-mRNA-1:exon:18443;Parent=Msa0470880-mRNA-1 |
| chr3_3 | exon | 73084142 | 73084715 | 73084142 | ID=Msa0470880-mRNA-1:exon:18442;Parent=Msa0470880-mRNA-1 |
| chr3_3 | CDS | 73084142 | 73084715 | 73084142 | ID=Msa0470880-mRNA-1:cds;Parent=Msa0470880-mRNA-1 |
| chr3_3 | CDS | 73083474 | 73083532 | 73083474 | ID=Msa0470880-mRNA-1:cds;Parent=Msa0470880-mRNA-1 |
| chr3_3 | three_prime_UTR | 73083153 | 73083473 | 73083153 | ID=Msa0470880-mRNA-1:three_prime_utr;Parent=Msa0470880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
