AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1212050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212050 MtrunA17_Chr4g0060931 97.778 360 7 1 1 360 1 359 0.0 736
Msa1212050 MtrunA17_Chr3g0091921 69.062 320 80 7 1 319 1 302 3.42e-144 410
Msa1212050 MtrunA17_Chr6g0453451 62.295 244 81 4 12 248 15 254 3.88e-104 309
Msa1212050 MtrunA17_Chr6g0461661 48.619 362 142 12 2 333 3 350 4.89e-100 300
Msa1212050 MtrunA17_Chr7g0253011 44.949 396 169 12 1 360 1 383 1.03e-98 297
Msa1212050 MtrunA17_Chr6g0484441 67.337 199 52 4 16 205 4 198 1.07e-89 272
Msa1212050 MtrunA17_Chr2g0316971 79.618 157 30 1 17 171 23 179 9.70e-89 272
Msa1212050 MtrunA17_Chr7g0217721 52.256 266 105 4 11 254 13 278 1.97e-81 252
Msa1212050 MtrunA17_Chr3g0139331 71.069 159 40 2 17 173 11 165 1.94e-78 244
Msa1212050 MtrunA17_Chr1g0147421 66.286 175 51 4 2 173 13 182 4.52e-78 244
Msa1212050 MtrunA17_Chr7g0217711 73.510 151 38 2 2 151 5 154 6.29e-73 224
Msa1212050 MtrunA17_Chr2g0312321 44.558 294 127 10 1 291 1 261 1.11e-67 215
Msa1212050 MtrunA17_Chr3g0144271 60.119 168 60 5 2 164 7 172 3.08e-61 202
Msa1212050 MtrunA17_Chr1g0183741 48.691 191 82 4 17 205 10 186 4.63e-59 192
Msa1212050 MtrunA17_Chr2g0318101 41.544 272 134 8 5 259 3 266 4.85e-59 194
Msa1212050 MtrunA17_Chr4g0056541 60.000 155 53 3 17 167 7 156 7.66e-59 194
Msa1212050 MtrunA17_Chr4g0018391 57.792 154 58 3 17 167 7 156 9.82e-59 193
Msa1212050 MtrunA17_Chr3g0113001 43.007 286 142 7 62 340 10 281 9.93e-59 192
Msa1212050 MtrunA17_Chr8g0359921 55.625 160 71 0 14 173 11 170 1.16e-58 192
Msa1212050 MtrunA17_Chr5g0417791 42.570 249 123 6 15 248 1 244 2.31e-58 189
Msa1212050 MtrunA17_Chr5g0405211 52.047 171 75 3 17 184 8 174 3.65e-58 192
Msa1212050 MtrunA17_Chr4g0017921 57.143 168 58 3 17 175 8 170 5.03e-58 192
Msa1212050 MtrunA17_Chr5g0398971 56.962 158 61 3 17 170 7 161 7.12e-58 191
Msa1212050 MtrunA17_Chr4g0042561 46.465 198 95 3 16 211 8 196 7.89e-58 189
Msa1212050 MtrunA17_Chr8g0372121 53.503 157 66 3 17 170 6 158 1.08e-57 189
Msa1212050 MtrunA17_Chr2g0318081 53.293 167 76 1 14 180 13 177 2.01e-57 190
Msa1212050 MtrunA17_Chr7g0252971 52.663 169 69 3 14 171 5 173 6.59e-57 188
Msa1212050 MtrunA17_Chr8g0346001 48.969 194 76 5 2 175 3 193 9.31e-57 191
Msa1212050 MtrunA17_Chr7g0263931 57.595 158 63 3 14 167 8 165 1.16e-56 187
Msa1212050 MtrunA17_Chr2g0309891 55.000 160 61 3 15 168 4 158 2.00e-56 187
Msa1212050 MtrunA17_Chr3g0124761 54.037 161 72 2 14 173 4 163 6.37e-56 184
Msa1212050 MtrunA17_Chr2g0309331 52.761 163 69 3 14 172 7 165 1.12e-55 185
Msa1212050 MtrunA17_Chr7g0261411 55.263 152 60 3 17 166 10 155 1.26e-55 184
Msa1212050 MtrunA17_Chr1g0200561 51.875 160 70 3 17 173 19 174 2.19e-54 182
Msa1212050 MtrunA17_Chr4g0047841 49.153 177 67 3 17 170 15 191 3.11e-54 181
Msa1212050 MtrunA17_Chr8g0384721 53.659 164 67 3 15 173 5 164 7.44e-54 179
Msa1212050 MtrunA17_Chr3g0109821 54.430 158 69 2 15 170 4 160 1.13e-53 187
Msa1212050 MtrunA17_Chr7g0214071 48.936 188 85 5 10 193 8 188 2.33e-53 176
Msa1212050 MtrunA17_Chr6g0481091 53.247 154 68 2 17 168 6 157 3.99e-53 175
Msa1212050 MtrunA17_Chr8g0361731 45.361 194 84 3 19 203 16 196 5.99e-53 179
Msa1212050 MtrunA17_Chr3g0130731 49.432 176 75 3 14 182 4 172 8.33e-53 176
Msa1212050 MtrunA17_Chr5g0433781 53.165 158 70 3 15 170 4 159 2.35e-52 183
Msa1212050 MtrunA17_Chr5g0417001 49.153 177 76 4 13 177 8 182 1.01e-51 176
Msa1212050 MtrunA17_Chr6g0453131 49.693 163 74 2 16 170 14 176 1.04e-51 176
Msa1212050 MtrunA17_Chr2g0326361 51.875 160 63 3 17 167 14 168 3.03e-50 171
Msa1212050 MtrunA17_Chr5g0400461 45.078 193 83 4 17 191 6 193 4.53e-50 171
Msa1212050 MtrunA17_Chr3g0130101 51.592 157 72 2 19 173 9 163 5.87e-50 171
Msa1212050 MtrunA17_Chr4g0054791 47.674 172 83 3 13 179 2 171 6.29e-49 167
Msa1212050 MtrunA17_Chr3g0128151 54.902 153 65 2 17 167 22 172 1.45e-48 172
Msa1212050 MtrunA17_Chr1g0197361 48.913 184 81 6 19 195 10 187 2.34e-48 172
Msa1212050 MtrunA17_Chr5g0428991 52.663 169 69 4 2 167 15 175 2.48e-48 172
Msa1212050 MtrunA17_Chr3g0092671 52.174 161 65 5 19 173 7 161 1.21e-46 166
Msa1212050 MtrunA17_Chr3g0113031 40.206 291 145 11 78 360 1 270 2.50e-46 159
Msa1212050 MtrunA17_Chr8g0364791 47.799 159 79 2 17 173 6 162 4.71e-46 162
Msa1212050 MtrunA17_Chr3g0128111 52.288 153 65 3 20 168 45 193 5.30e-46 157
Msa1212050 MtrunA17_Chr5g0442771 35.862 290 153 11 4 272 3 280 1.68e-45 158
Msa1212050 MtrunA17_Chr4g0076731 49.080 163 70 4 19 177 56 209 2.12e-45 160
Msa1212050 MtrunA17_Chr1g0201021 47.853 163 81 2 13 173 15 175 2.48e-45 163
Msa1212050 MtrunA17_Chr1g0197351 50.932 161 73 2 17 171 42 202 2.57e-45 161
Msa1212050 MtrunA17_Chr8g0384201 45.912 159 82 2 17 173 6 162 1.23e-44 160
Msa1212050 MtrunA17_Chr4g0038751 44.000 175 83 5 1 172 4 166 4.23e-43 151
Msa1212050 MtrunA17_Chr2g0311651 42.328 189 90 5 1 174 9 193 9.08e-43 150
Msa1212050 MtrunA17_Chr2g0311661 42.775 173 84 4 16 173 19 191 6.17e-42 148
Msa1212050 MtrunA17_Chr8g0385991 42.500 160 85 3 17 171 14 171 3.87e-39 139
Msa1212050 MtrunA17_Chr8g0345671 46.012 163 75 7 7 164 1 155 1.49e-37 139
Msa1212050 MtrunA17_Chr3g0131911 42.138 159 82 4 17 167 14 170 2.50e-37 134
Msa1212050 MtrunA17_Chr8g0345691 44.805 154 72 7 17 165 12 157 1.75e-33 128
Msa1212050 MtrunA17_Chr2g0321741 36.723 177 91 4 37 211 12 169 1.32e-32 125
Msa1212050 MtrunA17_Chr2g0321631 37.975 158 90 4 16 165 3 160 4.79e-32 120
Msa1212050 MtrunA17_Chr4g0026141 40.881 159 81 5 17 165 5 160 7.27e-32 120
Msa1212050 MtrunA17_Chr8g0345711 39.264 163 84 6 17 165 12 173 1.80e-30 114
Msa1212050 MtrunA17_Chr7g0266701 39.024 164 88 6 16 168 3 165 1.22e-29 114
Msa1212050 MtrunA17_Chr4g0050701 36.264 182 95 5 17 185 11 184 1.33e-29 112
Msa1212050 MtrunA17_Chr8g0345701 47.222 144 54 7 17 141 7 147 1.19e-28 109
Msa1212050 MtrunA17_Chr8g0345731 43.939 132 67 5 17 141 24 155 1.47e-27 106
Msa1212050 MtrunA17_Chr8g0384351 39.735 151 69 5 17 167 10 138 3.27e-25 100
Msa1212050 MtrunA17_Chr8g0345721 36.129 155 64 5 20 140 38 191 8.04e-24 97.8
Msa1212050 MtrunA17_Chr3g0130321 38.690 168 79 8 13 166 3 160 2.21e-23 96.3
Msa1212050 MtrunA17_Chr7g0243371 53.333 75 33 1 70 142 17 91 3.67e-22 90.5
Msa1212050 MtrunA17_Chr8g0345741 39.496 119 66 5 28 141 2 119 1.30e-20 87.4
Msa1212050 MtrunA17_Chr3g0113011 67.925 53 17 0 11 63 13 65 2.47e-19 81.3
Msa1212050 MtrunA17_Chr3g0113041 64.151 53 19 0 11 63 13 65 1.16e-17 76.6
Msa1212050 MtrunA17_Chr7g0251661 32.308 130 82 5 14 140 7 133 4.20e-17 77.8
Msa1212050 MtrunA17_Chr7g0251651 31.818 132 84 5 12 140 13 141 2.31e-15 73.9
Msa1212050 MtrunA17_Chr7g0251671 30.147 136 85 5 16 146 9 139 6.67e-15 71.6
Msa1212050 MtrunA17_Chr2g0324961 33.793 145 73 6 17 142 49 189 4.32e-12 65.9
Msa1212050 MtrunA17_Chr8g0389661 29.775 178 93 7 15 168 45 214 4.50e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1212050 AT5G61430.1 60.563 355 109 11 10 360 9 336 5.29e-146 416
Msa1212050 AT5G07680.1 56.749 363 120 13 1 360 1 329 3.22e-132 381
Msa1212050 AT5G07680.2 57.637 347 114 13 15 360 1 315 2.40e-128 370
Msa1212050 AT5G61430.2 57.191 299 97 11 66 360 2 273 3.06e-107 315
Msa1212050 AT5G39610.1 70.755 212 56 2 10 221 13 218 3.65e-104 308
Msa1212050 AT3G29035.1 60.700 257 72 5 10 258 17 252 1.57e-99 297
Msa1212050 AT5G18270.2 49.254 335 108 8 1 320 5 292 1.09e-98 296
Msa1212050 AT5G18270.1 48.955 335 109 8 1 320 5 292 2.59e-98 295
Msa1212050 AT3G04060.1 47.321 336 136 6 4 331 7 309 9.18e-93 281
Msa1212050 AT3G15170.1 63.551 214 66 4 11 221 15 219 6.28e-89 270
Msa1212050 AT5G53950.1 76.074 163 37 1 17 177 17 179 2.49e-88 271
Msa1212050 AT3G18400.1 57.940 233 85 5 16 244 4 227 1.83e-85 261
Msa1212050 AT2G24430.2 69.277 166 44 3 10 173 11 171 8.05e-79 244
Msa1212050 AT2G24430.1 69.277 166 44 3 10 173 11 171 8.05e-79 244
Msa1212050 AT1G76420.1 64.671 167 54 2 4 168 9 172 4.51e-72 228
Msa1212050 AT3G12977.1 40.333 300 131 5 16 315 17 268 1.07e-68 217
Msa1212050 AT1G56010.2 41.379 290 131 11 17 291 19 284 2.29e-64 207
Msa1212050 AT4G27410.2 54.217 166 74 1 14 179 11 174 1.66e-60 197
Msa1212050 AT3G04070.2 55.294 170 66 3 11 170 4 173 8.37e-60 196
Msa1212050 AT2G18060.3 54.601 163 67 3 13 172 5 163 3.77e-59 195
Msa1212050 AT2G18060.1 54.601 163 67 3 13 172 5 163 3.77e-59 195
Msa1212050 AT1G12260.2 58.228 158 59 3 17 171 7 160 4.05e-59 194
Msa1212050 AT1G12260.1 58.228 158 59 3 17 171 7 160 5.73e-59 196
Msa1212050 AT4G10350.1 58.974 156 55 3 17 167 9 160 1.84e-58 193
Msa1212050 AT1G62700.1 58.861 158 58 3 17 171 7 160 2.48e-58 194
Msa1212050 AT1G62700.2 58.861 158 58 3 17 171 7 160 2.48e-58 194
Msa1212050 AT4G36160.1 55.346 159 64 3 12 167 5 159 5.78e-58 192
Msa1212050 AT4G36160.3 55.346 159 64 3 12 167 5 159 5.78e-58 192
Msa1212050 AT4G36160.2 55.346 159 64 3 12 167 9 163 6.97e-58 192
Msa1212050 AT3G04070.1 50.538 186 66 3 11 170 4 189 3.20e-57 190
Msa1212050 AT5G04410.1 58.385 161 59 3 17 173 9 165 6.24e-57 194
Msa1212050 AT1G33280.1 57.143 154 58 3 17 167 8 156 1.33e-56 187
Msa1212050 AT1G71930.2 53.247 154 65 2 17 167 9 158 1.65e-56 187
Msa1212050 AT1G71930.1 53.247 154 65 2 17 167 9 158 1.65e-56 187
Msa1212050 AT2G46770.1 52.941 170 66 4 17 172 16 185 1.71e-56 188
Msa1212050 AT5G62380.2 57.143 154 59 3 17 167 7 156 2.42e-56 187
Msa1212050 AT5G62380.1 57.143 154 59 3 17 167 7 156 2.42e-56 187
Msa1212050 AT3G10500.1 55.901 161 63 3 17 173 9 165 3.04e-56 192
Msa1212050 AT1G61110.1 50.543 184 72 3 17 185 16 195 3.81e-56 186
Msa1212050 AT4G27410.3 49.180 183 74 2 14 179 11 191 3.93e-56 186
Msa1212050 AT1G69490.1 55.063 158 69 1 17 172 9 166 6.75e-56 184
Msa1212050 AT1G01720.1 53.614 166 68 3 13 173 3 164 2.78e-55 183
Msa1212050 AT5G66300.1 50.307 163 75 2 11 170 6 165 3.91e-55 182
Msa1212050 AT3G15500.1 51.497 167 79 1 14 180 11 175 4.24e-55 183
Msa1212050 AT1G52890.1 52.000 175 81 2 14 187 11 183 4.38e-55 183
Msa1212050 AT3G61910.1 49.412 170 72 2 17 172 11 180 1.47e-54 182
Msa1212050 AT1G33060.1 56.129 155 64 2 17 169 24 176 1.57e-54 189
Msa1212050 AT1G33060.2 56.129 155 64 2 17 169 24 176 1.68e-54 189
Msa1212050 AT3G17730.1 54.248 153 66 2 17 167 6 156 2.66e-54 179
Msa1212050 AT4G35580.1 56.863 153 62 2 17 167 9 159 2.90e-54 186
Msa1212050 AT4G35580.3 56.863 153 62 2 17 167 9 159 3.14e-54 187
Msa1212050 AT4G35580.2 56.863 153 62 2 17 167 9 159 3.62e-54 186
Msa1212050 AT5G08790.1 53.374 163 72 2 14 173 4 165 1.82e-53 178
Msa1212050 AT1G32770.1 47.500 200 93 4 17 205 16 214 3.09e-53 180
Msa1212050 AT1G65910.1 52.174 161 73 2 15 173 4 162 5.30e-53 185
Msa1212050 AT1G77450.1 52.121 165 77 2 10 173 3 166 5.53e-53 176
Msa1212050 AT5G46590.1 52.410 166 75 3 17 179 6 170 1.04e-52 176
Msa1212050 AT3G10490.1 53.503 157 70 2 17 171 27 182 1.17e-52 174
Msa1212050 AT3G10480.1 38.591 298 162 8 17 302 27 315 1.50e-52 180
Msa1212050 AT1G26870.1 45.000 220 99 6 9 217 6 214 2.56e-52 179
Msa1212050 AT4G28530.1 50.888 169 59 4 17 167 10 172 2.77e-52 177
Msa1212050 AT5G13180.1 49.714 175 77 4 1 173 1 166 3.65e-52 174
Msa1212050 AT1G79580.3 51.176 170 69 4 14 179 14 173 4.58e-52 177
Msa1212050 AT1G79580.5 51.176 170 69 4 14 179 14 173 4.58e-52 177
Msa1212050 AT1G79580.4 51.176 170 69 4 14 179 14 173 4.58e-52 177
Msa1212050 AT1G79580.2 51.176 170 69 4 14 179 14 173 4.58e-52 177
Msa1212050 AT1G79580.1 51.176 170 69 4 14 179 14 173 4.58e-52 177
Msa1212050 AT1G54330.1 56.129 155 61 2 15 167 4 153 5.64e-52 175
Msa1212050 AT3G15510.1 39.373 287 143 10 21 291 21 292 5.90e-52 176
Msa1212050 AT3G10480.2 38.926 298 160 8 17 302 27 314 9.93e-52 178
Msa1212050 AT3G03200.1 54.140 157 65 3 15 167 4 157 1.59e-51 178
Msa1212050 AT2G33480.2 52.663 169 67 4 1 167 1 158 2.92e-51 172
Msa1212050 AT3G10490.2 53.503 157 70 2 17 171 27 182 3.46e-51 177
Msa1212050 AT5G63790.1 50.898 167 78 2 10 173 43 208 3.59e-51 173
Msa1212050 AT5G63790.2 50.898 167 78 2 10 173 53 218 4.52e-51 173
Msa1212050 AT5G46590.2 60.465 129 48 2 17 142 6 134 1.09e-50 171
Msa1212050 AT2G33480.1 52.695 167 72 3 1 167 1 160 1.39e-50 170
Msa1212050 AT5G17260.1 53.503 157 66 3 15 167 4 157 2.18e-50 175
Msa1212050 AT5G39820.1 47.429 175 67 3 19 170 22 194 5.26e-50 171
Msa1212050 AT2G43000.1 44.444 171 93 2 7 176 7 176 7.77e-49 166
Msa1212050 AT4G17980.2 42.995 207 111 3 17 216 6 212 2.26e-48 165
Msa1212050 AT4G17980.1 42.995 207 111 3 17 216 6 212 2.38e-48 164
Msa1212050 AT5G24590.2 52.597 154 68 3 17 167 13 164 7.70e-48 168
Msa1212050 AT3G49530.2 50.292 171 71 7 2 167 3 164 3.29e-47 165
Msa1212050 AT2G02450.1 52.000 150 67 2 19 167 53 198 6.97e-47 164
Msa1212050 AT2G02450.2 52.000 150 67 2 19 167 53 198 8.91e-47 164
Msa1212050 AT3G49530.1 50.292 171 71 7 2 167 3 164 9.24e-47 166
Msa1212050 AT5G64060.1 44.785 163 84 3 14 173 3 162 1.24e-46 162
Msa1212050 AT3G10480.3 45.263 190 68 2 17 171 27 215 1.30e-46 166
Msa1212050 AT1G52880.1 51.250 160 68 2 21 170 21 180 3.19e-46 160
Msa1212050 AT5G09330.5 45.399 163 83 3 14 173 3 162 3.53e-46 164
Msa1212050 AT5G09330.2 45.399 163 83 3 14 173 3 162 3.53e-46 164
Msa1212050 AT5G09330.4 45.399 163 83 3 14 173 3 162 3.53e-46 164
Msa1212050 AT5G09330.3 45.399 163 83 3 14 173 3 162 3.53e-46 164
Msa1212050 AT5G09330.1 45.399 163 83 3 14 173 3 162 3.53e-46 164
Msa1212050 AT3G12977.2 46.746 169 78 4 66 233 14 171 4.15e-46 157
Msa1212050 AT2G27300.1 48.148 162 69 4 17 172 14 166 7.34e-46 160
Msa1212050 AT2G17040.1 47.134 157 73 3 19 172 8 157 1.03e-44 155
Msa1212050 AT1G34180.3 48.408 157 77 2 19 173 18 172 2.38e-44 159
Msa1212050 AT1G56010.1 39.256 242 105 10 66 291 2 217 3.27e-44 153
Msa1212050 AT1G34190.1 47.205 161 73 3 19 173 18 172 8.60e-44 159
Msa1212050 AT1G34180.1 48.408 157 77 2 19 173 18 172 1.11e-43 159
Msa1212050 AT1G34180.4 45.562 169 76 3 19 173 18 184 1.18e-42 154
Msa1212050 AT5G22290.1 46.939 147 69 2 19 164 23 161 2.07e-42 151
Msa1212050 AT1G34180.2 45.562 169 76 3 19 173 18 184 5.15e-42 154
Msa1212050 AT3G12910.1 43.258 178 85 5 11 173 15 191 8.71e-42 148
Msa1212050 AT1G32510.1 40.465 215 97 7 17 218 6 202 9.75e-42 147
Msa1212050 AT1G32870.2 48.466 163 80 2 13 173 6 166 2.55e-41 152
Msa1212050 AT1G32870.1 48.466 163 80 2 13 173 6 166 2.68e-41 152
Msa1212050 AT1G32870.3 48.466 163 80 2 13 173 42 202 5.19e-41 152
Msa1212050 AT3G44290.2 45.000 160 73 3 19 172 16 166 2.16e-40 142
Msa1212050 AT3G44290.1 45.000 160 73 3 19 172 16 166 4.51e-40 144
Msa1212050 AT5G04395.1 48.592 142 57 2 17 142 28 169 3.92e-37 132
Msa1212050 AT4G10350.2 57.658 111 38 3 62 167 7 113 1.09e-35 132
Msa1212050 AT4G28530.2 46.875 128 50 2 17 126 10 137 7.00e-31 119
Msa1212050 AT2G33480.3 57.143 98 40 1 70 167 8 103 3.39e-30 115
Msa1212050 AT4G01550.1 39.873 158 82 5 20 171 7 157 1.14e-28 116
Msa1212050 AT3G44350.2 38.182 165 91 5 16 172 4 165 6.29e-28 110
Msa1212050 AT5G64530.1 34.031 191 91 5 15 191 1 170 1.52e-27 107
Msa1212050 AT3G04420.2 38.854 157 85 4 15 167 1 150 2.81e-27 109
Msa1212050 AT3G04420.1 38.854 157 85 4 15 167 1 150 5.54e-27 109
Msa1212050 AT1G02230.1 38.922 167 83 7 18 177 4 158 9.61e-27 109
Msa1212050 AT5G22380.1 36.025 161 94 5 20 172 8 167 2.04e-26 105
Msa1212050 AT5G64530.2 40.769 130 63 3 15 142 1 118 2.20e-25 100
Msa1212050 AT4G01520.1 35.758 165 92 6 15 172 2 159 3.89e-25 103
Msa1212050 AT4G01540.3 36.250 160 88 6 20 172 7 159 1.21e-24 104
Msa1212050 AT3G44350.1 38.776 147 80 4 16 154 4 148 1.76e-24 98.6
Msa1212050 AT4G01540.4 36.250 160 88 6 20 172 7 159 1.80e-24 103
Msa1212050 AT4G01540.1 36.250 160 88 6 20 172 7 159 2.50e-24 103
Msa1212050 AT4G01540.2 36.250 160 88 6 20 172 7 159 2.71e-24 103
Msa1212050 AT2G18060.2 56.410 78 30 2 95 172 2 75 5.57e-24 100
Msa1212050 AT1G02220.1 40.000 130 71 3 15 140 1 127 2.72e-23 100
Msa1212050 AT3G10490.4 54.878 82 36 1 90 171 2 82 9.39e-23 98.2
Msa1212050 AT3G10490.3 54.878 82 36 1 90 171 2 82 9.39e-23 98.2
Msa1212050 AT1G02250.1 31.532 222 106 9 15 194 1 218 9.74e-23 98.2
Msa1212050 AT1G01010.1 33.491 212 105 10 20 215 6 197 5.70e-22 97.1
Msa1212050 AT2G43000.2 40.404 99 58 1 78 176 1 98 6.78e-21 89.7
Msa1212050 AT5G14000.1 35.802 162 94 4 15 173 13 167 1.04e-20 89.4
Msa1212050 AT5G14000.2 38.571 140 80 3 15 150 13 150 2.48e-20 87.0
Msa1212050 AT5G50820.1 32.941 170 84 7 15 169 15 169 1.47e-17 80.5
Msa1212050 AT3G56530.1 30.921 152 98 3 17 165 52 199 6.53e-16 78.2
Msa1212050 AT5G22290.2 46.377 69 29 1 96 164 2 62 7.22e-16 76.6
Msa1212050 AT3G55210.1 33.721 172 90 8 17 172 11 174 1.88e-15 76.3
Msa1212050 AT5G14490.1 34.266 143 76 4 17 142 58 199 2.45e-13 70.9
Msa1212050 AT5G14490.4 34.266 143 76 4 17 142 55 196 2.48e-13 70.9
Msa1212050 AT5G14490.2 34.266 143 76 4 17 142 55 196 3.28e-13 69.7
Msa1212050 AT5G14490.3 34.266 143 76 4 17 142 58 199 4.18e-13 70.1
Msa1212050 AT3G04430.1 30.534 131 79 3 23 141 6 136 3.52e-12 65.1
Msa1212050 AT4G29230.2 30.460 174 88 7 17 165 47 212 3.66e-12 67.8
Msa1212050 AT3G56520.1 27.473 182 94 8 17 179 8 170 4.08e-12 64.7
Msa1212050 AT4G28500.1 34.028 144 75 5 17 142 59 200 4.35e-12 66.6

Find 62 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCAACAACACAATTTA+TGG 0.153226 8_1:+71866304 Msa1212050:CDS
AAGAATACCTTTGCAGCTTT+TGG 0.230826 8_1:-71865944 None:intergenic
GATTCACTTGGTAATGAATT+TGG 0.258463 8_1:+71866148 Msa1212050:CDS
CGTTTCAGTCTTATCAAATA+AGG 0.280400 8_1:+71865372 Msa1212050:CDS
AAGTCATTACCTTTACAAAA+AGG 0.312749 8_1:+71865456 Msa1212050:CDS
CCATTAGAAGATGAAATTCT+TGG 0.319020 8_1:-71866361 None:intergenic
CAATATCCTAGTTCTGTTTG+TGG 0.332743 8_1:+71866421 Msa1212050:CDS
CCAAGAATTTCATCTTCTAA+TGG 0.346332 8_1:+71866361 Msa1212050:CDS
GAGAAGATGGATTTGCCTCC+TGG 0.385429 8_1:+71865400 Msa1212050:CDS
AATCAAACAATTGAATGATT+CGG 0.401710 8_1:+71866219 Msa1212050:CDS
CTTATAAGCTCTTCATCAGT+TGG 0.407970 8_1:-71865436 None:intergenic
GCAGGGTATTGGAAAGCAAC+TGG 0.414845 8_1:+71865773 Msa1212050:CDS
AGAGACAGAAAATATCCAAC+TGG 0.424929 8_1:+71865725 Msa1212050:CDS
GAGCAACAGAAGCAGGGTAT+TGG 0.425676 8_1:+71865762 Msa1212050:CDS
ACAAACAGAGCAACAGAAGC+AGG 0.435579 8_1:+71865755 Msa1212050:CDS
TATTTCTGGTATAATGAGGT+TGG 0.436493 8_1:+71866126 Msa1212050:CDS
CATTAGAAGATGAAATTCTT+GGG 0.450617 8_1:-71866360 None:intergenic
ATCAATTGAGTTGGAGAAGC+AGG 0.451718 8_1:-71866251 None:intergenic
CTGATTCGTCGAATTCGATT+GGG 0.452226 8_1:+71866194 Msa1212050:CDS
AGAATGAATGGGTGATTTGT+AGG 0.455073 8_1:+71866068 Msa1212050:intron
CCTCAACAAGTCTGAACCTT+GGG 0.462640 8_1:+71865522 Msa1212050:CDS
AATTTCTCTGCAAGAGCCAT+TGG 0.466190 8_1:+71865490 Msa1212050:CDS
CTGTTTGTCCTCAACCCAGT+TGG 0.474621 8_1:-71865740 None:intergenic
ACTGATTCGTCGAATTCGAT+TGG 0.482670 8_1:+71866193 Msa1212050:CDS
CACATATTTCTGGTATAATG+AGG 0.489545 8_1:+71866122 Msa1212050:CDS
GATGAGTGTATCACAGGAAA+CGG 0.491856 8_1:+71866516 Msa1212050:CDS
AAATAAGGAAGATGAGAAGA+TGG 0.493958 8_1:+71865387 Msa1212050:CDS
TTATAAGCTCTTCATCAGTT+GGG 0.498830 8_1:-71865435 None:intergenic
TCAACAGCTGCAACAGAAGC+AGG 0.510943 8_1:-71866634 None:intergenic
TCTTTGAACATCAATTGAGT+TGG 0.511446 8_1:-71866260 None:intergenic
GAAAATATCCAACTGGGTTG+AGG 0.516250 8_1:+71865732 Msa1212050:CDS
ATGCATGAATATCGACTTGA+GGG 0.521465 8_1:+71865899 Msa1212050:CDS
TACTTACATGGTAAATCCCA+AGG 0.522817 8_1:-71865538 None:intergenic
ATGAATCAAAGATCCCTCCT+TGG 0.526043 8_1:-71866285 None:intergenic
CCCAAGGTTCAGACTTGTTG+AGG 0.528521 8_1:-71865522 None:intergenic
GTTGGGTGAAATCGAAATCC+AGG 0.529612 8_1:-71865418 None:intergenic
TTCAAAGGGAAATCGTTGGT+TGG 0.533657 8_1:+71865812 Msa1212050:CDS
TTCAACAACACAATTTATGG+TGG 0.546063 8_1:+71866307 Msa1212050:CDS
TACAAAGGAAGAGCACCTAA+AGG 0.552423 8_1:+71865857 Msa1212050:CDS
ACAAATGATGAGTGTATCAC+AGG 0.560386 8_1:+71866510 Msa1212050:CDS
TAATCTTCCAAAAGCTGCAA+AGG 0.563656 8_1:+71865937 Msa1212050:CDS
TGCATACCACAAACAGAACT+AGG 0.564682 8_1:-71866427 None:intergenic
GAATGAATGGGTGATTTGTA+GGG 0.566421 8_1:+71866069 Msa1212050:intron
GCTGCAACAGAAGCAGGTGG+TGG 0.576822 8_1:-71866628 None:intergenic
ACCTCAACAAGTCTGAACCT+TGG 0.581627 8_1:+71865521 Msa1212050:CDS
CAGGGTATTGGAAAGCAACT+GGG 0.599644 8_1:+71865774 Msa1212050:CDS
ATTGCAAATTAACCGCACCT+TGG 0.601004 8_1:-71866402 None:intergenic
TATGCATGAATATCGACTTG+AGG 0.612535 8_1:+71865898 Msa1212050:CDS
ATTGATGTTCAAAGAAACCA+AGG 0.616657 8_1:+71866268 Msa1212050:CDS
GAATTCGACGAATCAGTAAG+TGG 0.627084 8_1:-71866187 None:intergenic
GTTGAGGTCTACATCACCAA+TGG 0.634909 8_1:-71865506 None:intergenic
AGAGCTTTGTATGAAAACAA+CGG 0.644899 8_1:+71866466 Msa1212050:CDS
ATAATGAGGTTGGATTCACT+TGG 0.646475 8_1:+71866136 Msa1212050:CDS
CAAACAGAGCAACAGAAGCA+GGG 0.648037 8_1:+71865756 Msa1212050:CDS
GAGACAGAAAATATCCAACT+GGG 0.662566 8_1:+71865726 Msa1212050:CDS
TCATTATACTCTAATAACCA+AGG 0.663722 8_1:+71866385 Msa1212050:CDS
ATGTTCAAAGAAACCAAGGA+GGG 0.670364 8_1:+71866272 Msa1212050:CDS
ATACTCTAATAACCAAGGTG+CGG 0.686349 8_1:+71866390 Msa1212050:CDS
TTCGACGAATCAGTAAGTGG+TGG 0.693712 8_1:-71866184 None:intergenic
ACAGCTGCAACAGAAGCAGG+TGG 0.707691 8_1:-71866631 None:intergenic
GATGTTCAAAGAAACCAAGG+AGG 0.712058 8_1:+71866271 Msa1212050:CDS
GGGTGAAATCGAAATCCAGG+AGG 0.750114 8_1:-71865415 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTGTTTTGAAATTT+TGG + chr8_1:71865651-71865670 Msa1212050:intron 10.0%
!!! TTTTTTTGTTTTGAAATTTT+GGG + chr8_1:71865652-71865671 Msa1212050:intron 10.0%
!!! TTTTTTTTGTTTTGAAATTT+TGG + chr8_1:71865651-71865670 Msa1212050:intron 10.0%
!!! TTTTTTTGTTTTGAAATTTT+GGG + chr8_1:71865652-71865671 Msa1212050:intron 10.0%
!!! AAAGATAAAGAAATTTTCAA+AGG + chr8_1:71865797-71865816 Msa1212050:CDS 15.0%
!!! AAGATAAAGAAATTTTCAAA+GGG + chr8_1:71865798-71865817 Msa1212050:CDS 15.0%
!!! AAAGATAAAGAAATTTTCAA+AGG + chr8_1:71865797-71865816 Msa1212050:CDS 15.0%
!!! AAGATAAAGAAATTTTCAAA+GGG + chr8_1:71865798-71865817 Msa1212050:CDS 15.0%
!!! AATCAATAACCTTTTTGTAA+AGG - chr8_1:71865468-71865487 None:intergenic 20.0%
!! AAGATTCATATCAAATTCAA+AGG - chr8_1:71865613-71865632 None:intergenic 20.0%
!!! GTTTTAGTTAAAGCAAAAAT+GGG + chr8_1:71865674-71865693 Msa1212050:intron 20.0%
!! TAAAGGAGAAAAAAGTAATT+GGG + chr8_1:71865874-71865893 Msa1212050:CDS 20.0%
!!! ATTCAAAAGGCATAAAAAAA+TGG - chr8_1:71866015-71866034 None:intergenic 20.0%
!! AATCCAAATTCAAATTCAAA+AGG - chr8_1:71866028-71866047 None:intergenic 20.0%
!! TTTGAATTTGAATTTGGATT+TGG + chr8_1:71866028-71866047 Msa1212050:intron 20.0%
!! AATCAAACAATTGAATGATT+CGG + chr8_1:71866219-71866238 Msa1212050:CDS 20.0%
!!! AATCAATAACCTTTTTGTAA+AGG - chr8_1:71865468-71865487 None:intergenic 20.0%
!! AAGATTCATATCAAATTCAA+AGG - chr8_1:71865613-71865632 None:intergenic 20.0%
!!! GTTTTAGTTAAAGCAAAAAT+GGG + chr8_1:71865674-71865693 Msa1212050:intron 20.0%
!! TAAAGGAGAAAAAAGTAATT+GGG + chr8_1:71865874-71865893 Msa1212050:CDS 20.0%
!!! ATTCAAAAGGCATAAAAAAA+TGG - chr8_1:71866015-71866034 None:intergenic 20.0%
!! AATCCAAATTCAAATTCAAA+AGG - chr8_1:71866028-71866047 None:intergenic 20.0%
!! TTTGAATTTGAATTTGGATT+TGG + chr8_1:71866028-71866047 Msa1212050:intron 20.0%
!! AATCAAACAATTGAATGATT+CGG + chr8_1:71866219-71866238 Msa1212050:CDS 20.0%
! AAGTCATTACCTTTACAAAA+AGG + chr8_1:71865456-71865475 Msa1212050:CDS 25.0%
!!! TTTGATTGGTTTTACTTACA+TGG - chr8_1:71865553-71865572 None:intergenic 25.0%
! AAAAGGTGAAAACAAAAAGT+GGG - chr8_1:71865584-71865603 None:intergenic 25.0%
! AAAAAGGTGAAAACAAAAAG+TGG - chr8_1:71865585-71865604 None:intergenic 25.0%
! AAATTCAAAGGTGGTAAAAA+AGG - chr8_1:71865601-71865620 None:intergenic 25.0%
! ATTCATATCAAATTCAAAGG+TGG - chr8_1:71865610-71865629 None:intergenic 25.0%
!!! GGTTTTAGTTAAAGCAAAAA+TGG + chr8_1:71865673-71865692 Msa1212050:intron 25.0%
!!! AAAACTCTTGTTTTCTACAA+AGG + chr8_1:71865842-71865861 Msa1212050:CDS 25.0%
!!! CAATTACTTTTTTCTCCTTT+AGG - chr8_1:71865875-71865894 None:intergenic 25.0%
! CTAAAGGAGAAAAAAGTAAT+TGG + chr8_1:71865873-71865892 Msa1212050:CDS 25.0%
!! ATGCCTTTTGAATTTGAATT+TGG + chr8_1:71866022-71866041 Msa1212050:intron 25.0%
! TCATTCAACAACACAATTTA+TGG + chr8_1:71866304-71866323 Msa1212050:CDS 25.0%
! CATTAGAAGATGAAATTCTT+GGG - chr8_1:71866363-71866382 None:intergenic 25.0%
! TCATTATACTCTAATAACCA+AGG + chr8_1:71866385-71866404 Msa1212050:CDS 25.0%
!!! GTTGTGTCAAATTTTGATAT+TGG + chr8_1:71866574-71866593 Msa1212050:CDS 25.0%
!!! CAAATTTTGATATTGGTAGA+AGG + chr8_1:71866581-71866600 Msa1212050:CDS 25.0%
! AAGTCATTACCTTTACAAAA+AGG + chr8_1:71865456-71865475 Msa1212050:CDS 25.0%
!!! TTTGATTGGTTTTACTTACA+TGG - chr8_1:71865553-71865572 None:intergenic 25.0%
! AAAAGGTGAAAACAAAAAGT+GGG - chr8_1:71865584-71865603 None:intergenic 25.0%
! AAAAAGGTGAAAACAAAAAG+TGG - chr8_1:71865585-71865604 None:intergenic 25.0%
! AAATTCAAAGGTGGTAAAAA+AGG - chr8_1:71865601-71865620 None:intergenic 25.0%
! ATTCATATCAAATTCAAAGG+TGG - chr8_1:71865610-71865629 None:intergenic 25.0%
!!! GGTTTTAGTTAAAGCAAAAA+TGG + chr8_1:71865673-71865692 Msa1212050:intron 25.0%
!!! AAAACTCTTGTTTTCTACAA+AGG + chr8_1:71865842-71865861 Msa1212050:CDS 25.0%
!!! CAATTACTTTTTTCTCCTTT+AGG - chr8_1:71865875-71865894 None:intergenic 25.0%
! CTAAAGGAGAAAAAAGTAAT+TGG + chr8_1:71865873-71865892 Msa1212050:CDS 25.0%
!! ATGCCTTTTGAATTTGAATT+TGG + chr8_1:71866022-71866041 Msa1212050:intron 25.0%
! TCATTCAACAACACAATTTA+TGG + chr8_1:71866304-71866323 Msa1212050:CDS 25.0%
! CATTAGAAGATGAAATTCTT+GGG - chr8_1:71866363-71866382 None:intergenic 25.0%
! TCATTATACTCTAATAACCA+AGG + chr8_1:71866385-71866404 Msa1212050:CDS 25.0%
!!! GTTGTGTCAAATTTTGATAT+TGG + chr8_1:71866574-71866593 Msa1212050:CDS 25.0%
!!! CAAATTTTGATATTGGTAGA+AGG + chr8_1:71866581-71866600 Msa1212050:CDS 25.0%
! CGTTTCAGTCTTATCAAATA+AGG + chr8_1:71865372-71865391 Msa1212050:CDS 30.0%
AAATAAGGAAGATGAGAAGA+TGG + chr8_1:71865387-71865406 Msa1212050:CDS 30.0%
TTATAAGCTCTTCATCAGTT+GGG - chr8_1:71865438-71865457 None:intergenic 30.0%
CAAAAATGGGAGAAAAAGAA+TGG + chr8_1:71865687-71865706 Msa1212050:CDS 30.0%
! AATTTTCAAAGGGAAATCGT+TGG + chr8_1:71865808-71865827 Msa1212050:CDS 30.0%
! ATTGTGTTTTGCAGAATGAA+TGG + chr8_1:71866056-71866075 Msa1212050:intron 30.0%
! TTGTGTTTTGCAGAATGAAT+GGG + chr8_1:71866057-71866076 Msa1212050:intron 30.0%
GGGAAAAAAACACATATTTC+TGG + chr8_1:71866112-71866131 Msa1212050:CDS 30.0%
!! CACATATTTCTGGTATAATG+AGG + chr8_1:71866122-71866141 Msa1212050:CDS 30.0%
!! TATTTCTGGTATAATGAGGT+TGG + chr8_1:71866126-71866145 Msa1212050:CDS 30.0%
!! GATTCACTTGGTAATGAATT+TGG + chr8_1:71866148-71866167 Msa1212050:CDS 30.0%
TCTTTGAACATCAATTGAGT+TGG - chr8_1:71866263-71866282 None:intergenic 30.0%
ATTGATGTTCAAAGAAACCA+AGG + chr8_1:71866268-71866287 Msa1212050:CDS 30.0%
TTCAACAACACAATTTATGG+TGG + chr8_1:71866307-71866326 Msa1212050:CDS 30.0%
CCATTAGAAGATGAAATTCT+TGG - chr8_1:71866364-71866383 None:intergenic 30.0%
CCAAGAATTTCATCTTCTAA+TGG + chr8_1:71866361-71866380 Msa1212050:CDS 30.0%
! AGAGCTTTGTATGAAAACAA+CGG + chr8_1:71866466-71866485 Msa1212050:CDS 30.0%
! TTGATTTTCATGGTACTTTG+TGG + chr8_1:71866653-71866672 Msa1212050:CDS 30.0%
! CGTTTCAGTCTTATCAAATA+AGG + chr8_1:71865372-71865391 Msa1212050:CDS 30.0%
AAATAAGGAAGATGAGAAGA+TGG + chr8_1:71865387-71865406 Msa1212050:CDS 30.0%
TTATAAGCTCTTCATCAGTT+GGG - chr8_1:71865438-71865457 None:intergenic 30.0%
CAAAAATGGGAGAAAAAGAA+TGG + chr8_1:71865687-71865706 Msa1212050:CDS 30.0%
! AATTTTCAAAGGGAAATCGT+TGG + chr8_1:71865808-71865827 Msa1212050:CDS 30.0%
! ATTGTGTTTTGCAGAATGAA+TGG + chr8_1:71866056-71866075 Msa1212050:intron 30.0%
! TTGTGTTTTGCAGAATGAAT+GGG + chr8_1:71866057-71866076 Msa1212050:intron 30.0%
GGGAAAAAAACACATATTTC+TGG + chr8_1:71866112-71866131 Msa1212050:CDS 30.0%
!! CACATATTTCTGGTATAATG+AGG + chr8_1:71866122-71866141 Msa1212050:CDS 30.0%
!! TATTTCTGGTATAATGAGGT+TGG + chr8_1:71866126-71866145 Msa1212050:CDS 30.0%
!! GATTCACTTGGTAATGAATT+TGG + chr8_1:71866148-71866167 Msa1212050:CDS 30.0%
TCTTTGAACATCAATTGAGT+TGG - chr8_1:71866263-71866282 None:intergenic 30.0%
ATTGATGTTCAAAGAAACCA+AGG + chr8_1:71866268-71866287 Msa1212050:CDS 30.0%
TTCAACAACACAATTTATGG+TGG + chr8_1:71866307-71866326 Msa1212050:CDS 30.0%
CCATTAGAAGATGAAATTCT+TGG - chr8_1:71866364-71866383 None:intergenic 30.0%
CCAAGAATTTCATCTTCTAA+TGG + chr8_1:71866361-71866380 Msa1212050:CDS 30.0%
! AGAGCTTTGTATGAAAACAA+CGG + chr8_1:71866466-71866485 Msa1212050:CDS 30.0%
! TTGATTTTCATGGTACTTTG+TGG + chr8_1:71866653-71866672 Msa1212050:CDS 30.0%
CTTATAAGCTCTTCATCAGT+TGG - chr8_1:71865439-71865458 None:intergenic 35.0%
TACTTACATGGTAAATCCCA+AGG - chr8_1:71865541-71865560 None:intergenic 35.0%
AGTGGGTCTGAAAATTTGAT+TGG - chr8_1:71865567-71865586 None:intergenic 35.0%
AGAGACAGAAAATATCCAAC+TGG + chr8_1:71865725-71865744 Msa1212050:CDS 35.0%
GAGACAGAAAATATCCAACT+GGG + chr8_1:71865726-71865745 Msa1212050:CDS 35.0%
!! TATGCATGAATATCGACTTG+AGG + chr8_1:71865898-71865917 Msa1212050:CDS 35.0%
!! ATGCATGAATATCGACTTGA+GGG + chr8_1:71865899-71865918 Msa1212050:CDS 35.0%
TAATCTTCCAAAAGCTGCAA+AGG + chr8_1:71865937-71865956 Msa1212050:CDS 35.0%
! AAGAATACCTTTGCAGCTTT+TGG - chr8_1:71865947-71865966 None:intergenic 35.0%
! AGAATGAATGGGTGATTTGT+AGG + chr8_1:71866068-71866087 Msa1212050:intron 35.0%
! GAATGAATGGGTGATTTGTA+GGG + chr8_1:71866069-71866088 Msa1212050:intron 35.0%
!! TTTTTCAGAAGAGTTCAGCT+GGG + chr8_1:71866092-71866111 Msa1212050:CDS 35.0%
ATAATGAGGTTGGATTCACT+TGG + chr8_1:71866136-71866155 Msa1212050:CDS 35.0%
ATGTTCAAAGAAACCAAGGA+GGG + chr8_1:71866272-71866291 Msa1212050:CDS 35.0%
ATACTCTAATAACCAAGGTG+CGG + chr8_1:71866390-71866409 Msa1212050:CDS 35.0%
!! CAATATCCTAGTTCTGTTTG+TGG + chr8_1:71866421-71866440 Msa1212050:CDS 35.0%
ACAAATGATGAGTGTATCAC+AGG + chr8_1:71866510-71866529 Msa1212050:CDS 35.0%
CTTATAAGCTCTTCATCAGT+TGG - chr8_1:71865439-71865458 None:intergenic 35.0%
TACTTACATGGTAAATCCCA+AGG - chr8_1:71865541-71865560 None:intergenic 35.0%
AGTGGGTCTGAAAATTTGAT+TGG - chr8_1:71865567-71865586 None:intergenic 35.0%
AGAGACAGAAAATATCCAAC+TGG + chr8_1:71865725-71865744 Msa1212050:CDS 35.0%
GAGACAGAAAATATCCAACT+GGG + chr8_1:71865726-71865745 Msa1212050:CDS 35.0%
!! TATGCATGAATATCGACTTG+AGG + chr8_1:71865898-71865917 Msa1212050:CDS 35.0%
!! ATGCATGAATATCGACTTGA+GGG + chr8_1:71865899-71865918 Msa1212050:CDS 35.0%
TAATCTTCCAAAAGCTGCAA+AGG + chr8_1:71865937-71865956 Msa1212050:CDS 35.0%
! AAGAATACCTTTGCAGCTTT+TGG - chr8_1:71865947-71865966 None:intergenic 35.0%
! AGAATGAATGGGTGATTTGT+AGG + chr8_1:71866068-71866087 Msa1212050:intron 35.0%
! GAATGAATGGGTGATTTGTA+GGG + chr8_1:71866069-71866088 Msa1212050:intron 35.0%
!! TTTTTCAGAAGAGTTCAGCT+GGG + chr8_1:71866092-71866111 Msa1212050:CDS 35.0%
ATAATGAGGTTGGATTCACT+TGG + chr8_1:71866136-71866155 Msa1212050:CDS 35.0%
ATGTTCAAAGAAACCAAGGA+GGG + chr8_1:71866272-71866291 Msa1212050:CDS 35.0%
ATACTCTAATAACCAAGGTG+CGG + chr8_1:71866390-71866409 Msa1212050:CDS 35.0%
!! CAATATCCTAGTTCTGTTTG+TGG + chr8_1:71866421-71866440 Msa1212050:CDS 35.0%
ACAAATGATGAGTGTATCAC+AGG + chr8_1:71866510-71866529 Msa1212050:CDS 35.0%
AATTTCTCTGCAAGAGCCAT+TGG + chr8_1:71865490-71865509 Msa1212050:CDS 40.0%
GAAAATATCCAACTGGGTTG+AGG + chr8_1:71865732-71865751 Msa1212050:CDS 40.0%
TTCAAAGGGAAATCGTTGGT+TGG + chr8_1:71865812-71865831 Msa1212050:CDS 40.0%
!! TACAAAGGAAGAGCACCTAA+AGG + chr8_1:71865857-71865876 Msa1212050:CDS 40.0%
!! GTTTTTCAGAAGAGTTCAGC+TGG + chr8_1:71866091-71866110 Msa1212050:CDS 40.0%
GAATTCGACGAATCAGTAAG+TGG - chr8_1:71866190-71866209 None:intergenic 40.0%
!! ACTGATTCGTCGAATTCGAT+TGG + chr8_1:71866193-71866212 Msa1212050:CDS 40.0%
! CTGATTCGTCGAATTCGATT+GGG + chr8_1:71866194-71866213 Msa1212050:CDS 40.0%
!! ATCAATTGAGTTGGAGAAGC+AGG - chr8_1:71866254-71866273 None:intergenic 40.0%
GATGTTCAAAGAAACCAAGG+AGG + chr8_1:71866271-71866290 Msa1212050:CDS 40.0%
ATGAATCAAAGATCCCTCCT+TGG - chr8_1:71866288-71866307 None:intergenic 40.0%
ATTGCAAATTAACCGCACCT+TGG - chr8_1:71866405-71866424 None:intergenic 40.0%
TGCATACCACAAACAGAACT+AGG - chr8_1:71866430-71866449 None:intergenic 40.0%
GATGAGTGTATCACAGGAAA+CGG + chr8_1:71866516-71866535 Msa1212050:CDS 40.0%
!!! GTTGCAGCTGTTGATTTTCA+TGG + chr8_1:71866643-71866662 Msa1212050:CDS 40.0%
AATTTCTCTGCAAGAGCCAT+TGG + chr8_1:71865490-71865509 Msa1212050:CDS 40.0%
GAAAATATCCAACTGGGTTG+AGG + chr8_1:71865732-71865751 Msa1212050:CDS 40.0%
TTCAAAGGGAAATCGTTGGT+TGG + chr8_1:71865812-71865831 Msa1212050:CDS 40.0%
!! TACAAAGGAAGAGCACCTAA+AGG + chr8_1:71865857-71865876 Msa1212050:CDS 40.0%
!! GTTTTTCAGAAGAGTTCAGC+TGG + chr8_1:71866091-71866110 Msa1212050:CDS 40.0%
GAATTCGACGAATCAGTAAG+TGG - chr8_1:71866190-71866209 None:intergenic 40.0%
!! ACTGATTCGTCGAATTCGAT+TGG + chr8_1:71866193-71866212 Msa1212050:CDS 40.0%
! CTGATTCGTCGAATTCGATT+GGG + chr8_1:71866194-71866213 Msa1212050:CDS 40.0%
!! ATCAATTGAGTTGGAGAAGC+AGG - chr8_1:71866254-71866273 None:intergenic 40.0%
GATGTTCAAAGAAACCAAGG+AGG + chr8_1:71866271-71866290 Msa1212050:CDS 40.0%
ATGAATCAAAGATCCCTCCT+TGG - chr8_1:71866288-71866307 None:intergenic 40.0%
ATTGCAAATTAACCGCACCT+TGG - chr8_1:71866405-71866424 None:intergenic 40.0%
TGCATACCACAAACAGAACT+AGG - chr8_1:71866430-71866449 None:intergenic 40.0%
GATGAGTGTATCACAGGAAA+CGG + chr8_1:71866516-71866535 Msa1212050:CDS 40.0%
!!! GTTGCAGCTGTTGATTTTCA+TGG + chr8_1:71866643-71866662 Msa1212050:CDS 40.0%
GTTGGGTGAAATCGAAATCC+AGG - chr8_1:71865421-71865440 None:intergenic 45.0%
GTTGAGGTCTACATCACCAA+TGG - chr8_1:71865509-71865528 None:intergenic 45.0%
ACCTCAACAAGTCTGAACCT+TGG + chr8_1:71865521-71865540 Msa1212050:CDS 45.0%
CCTCAACAAGTCTGAACCTT+GGG + chr8_1:71865522-71865541 Msa1212050:CDS 45.0%
ACAAACAGAGCAACAGAAGC+AGG + chr8_1:71865755-71865774 Msa1212050:CDS 45.0%
CAAACAGAGCAACAGAAGCA+GGG + chr8_1:71865756-71865775 Msa1212050:CDS 45.0%
!! CAGGGTATTGGAAAGCAACT+GGG + chr8_1:71865774-71865793 Msa1212050:CDS 45.0%
TTCGACGAATCAGTAAGTGG+TGG - chr8_1:71866187-71866206 None:intergenic 45.0%
GTTGGGTGAAATCGAAATCC+AGG - chr8_1:71865421-71865440 None:intergenic 45.0%
GTTGAGGTCTACATCACCAA+TGG - chr8_1:71865509-71865528 None:intergenic 45.0%
ACCTCAACAAGTCTGAACCT+TGG + chr8_1:71865521-71865540 Msa1212050:CDS 45.0%
CCTCAACAAGTCTGAACCTT+GGG + chr8_1:71865522-71865541 Msa1212050:CDS 45.0%
ACAAACAGAGCAACAGAAGC+AGG + chr8_1:71865755-71865774 Msa1212050:CDS 45.0%
CAAACAGAGCAACAGAAGCA+GGG + chr8_1:71865756-71865775 Msa1212050:CDS 45.0%
!! CAGGGTATTGGAAAGCAACT+GGG + chr8_1:71865774-71865793 Msa1212050:CDS 45.0%
TTCGACGAATCAGTAAGTGG+TGG - chr8_1:71866187-71866206 None:intergenic 45.0%
! GAGAAGATGGATTTGCCTCC+TGG + chr8_1:71865400-71865419 Msa1212050:CDS 50.0%
GGGTGAAATCGAAATCCAGG+AGG - chr8_1:71865418-71865437 None:intergenic 50.0%
!! CCCAAGGTTCAGACTTGTTG+AGG - chr8_1:71865525-71865544 None:intergenic 50.0%
CTGTTTGTCCTCAACCCAGT+TGG - chr8_1:71865743-71865762 None:intergenic 50.0%
GAGCAACAGAAGCAGGGTAT+TGG + chr8_1:71865762-71865781 Msa1212050:CDS 50.0%
!! GCAGGGTATTGGAAAGCAAC+TGG + chr8_1:71865773-71865792 Msa1212050:CDS 50.0%
TCAACAGCTGCAACAGAAGC+AGG - chr8_1:71866637-71866656 None:intergenic 50.0%
! GAGAAGATGGATTTGCCTCC+TGG + chr8_1:71865400-71865419 Msa1212050:CDS 50.0%
GGGTGAAATCGAAATCCAGG+AGG - chr8_1:71865418-71865437 None:intergenic 50.0%
!! CCCAAGGTTCAGACTTGTTG+AGG - chr8_1:71865525-71865544 None:intergenic 50.0%
CTGTTTGTCCTCAACCCAGT+TGG - chr8_1:71865743-71865762 None:intergenic 50.0%
GAGCAACAGAAGCAGGGTAT+TGG + chr8_1:71865762-71865781 Msa1212050:CDS 50.0%
!! GCAGGGTATTGGAAAGCAAC+TGG + chr8_1:71865773-71865792 Msa1212050:CDS 50.0%
TCAACAGCTGCAACAGAAGC+AGG - chr8_1:71866637-71866656 None:intergenic 50.0%
ACAGCTGCAACAGAAGCAGG+TGG - chr8_1:71866634-71866653 None:intergenic 55.0%
ACAGCTGCAACAGAAGCAGG+TGG - chr8_1:71866634-71866653 None:intergenic 55.0%
GCTGCAACAGAAGCAGGTGG+TGG - chr8_1:71866631-71866650 None:intergenic 60.0%
GCTGCAACAGAAGCAGGTGG+TGG - chr8_1:71866631-71866650 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71865364 71866684 71865364 ID=Msa1212050;Name=Msa1212050
chr8_1 mRNA 71865364 71866684 71865364 ID=Msa1212050-mRNA-1;Parent=Msa1212050;Name=Msa1212050-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.33|1|1|1|3|0|360
chr8_1 exon 71865364 71865553 71865364 ID=Msa1212050-mRNA-1:exon:24167;Parent=Msa1212050-mRNA-1
chr8_1 exon 71865681 71865958 71865681 ID=Msa1212050-mRNA-1:exon:24168;Parent=Msa1212050-mRNA-1
chr8_1 exon 71866070 71866684 71866070 ID=Msa1212050-mRNA-1:exon:24169;Parent=Msa1212050-mRNA-1
chr8_1 CDS 71865364 71865553 71865364 ID=Msa1212050-mRNA-1:cds;Parent=Msa1212050-mRNA-1
chr8_1 CDS 71865681 71865958 71865681 ID=Msa1212050-mRNA-1:cds;Parent=Msa1212050-mRNA-1
chr8_1 CDS 71866070 71866684 71866070 ID=Msa1212050-mRNA-1:cds;Parent=Msa1212050-mRNA-1
Gene Sequence

>Msa1212050

ATGGAAAACGTTTCAGTCTTATCAAATAAGGAAGATGAGAAGATGGATTTGCCTCCTGGATTTCGATTTCACCCAACTGATGAAGAGCTTATAAGTCATTACCTTTACAAAAAGGTTATTGATTCAAATTTCTCTGCAAGAGCCATTGGTGATGTAGACCTCAACAAGTCTGAACCTTGGGATTTACCATTTAAAGCAAAAATGGGAGAAAAAGAATGGTACTTTTTCTGTGTGAGAGACAGAAAATATCCAACTGGGTTGAGGACAAACAGAGCAACAGAAGCAGGGTATTGGAAAGCAACTGGGAAAGATAAAGAAATTTTCAAAGGGAAATCGTTGGTTGGTATGAAGAAAACTCTTGTTTTCTACAAAGGAAGAGCACCTAAAGGAGAAAAAAGTAATTGGGTTATGCATGAATATCGACTTGAGGGTAAATTCTCTGTTCATAATCTTCCAAAAGCTGCAAAGAATGAATGGGTGATTTGTAGGGTTTTTCAGAAGAGTTCAGCTGGGAAAAAAACACATATTTCTGGTATAATGAGGTTGGATTCACTTGGTAATGAATTTGGTTGTTCTGTTTTACCACCACTTACTGATTCGTCGAATTCGATTGGGAAAATCAAACAATTGAATGATTCGGCTTACGTGTCCTGCTTCTCCAACTCAATTGATGTTCAAAGAAACCAAGGAGGGATCTTTGATTCATTCAACAACACAATTTATGGTGGAATTTCTTCACATAATCAACTAGATTTTTTCCCAAGAATTTCATCTTCTAATGGTTCATTATACTCTAATAACCAAGGTGCGGTTAATTTGCAATATCCTAGTTCTGTTTGTGGTATGCAAGATCAAACAATTTTAAGAGCTTTGTATGAAAACAACGGTTTCAAGACTGAGAGACAGCAACAAATGATGAGTGTATCACAGGAAACGGATCTAACTACTGATATGAATGCTGAAACATGTTCTGTTGTGTCAAATTTTGATATTGGTAGAAGGACTTTTGAGAATAATCAGAATCGTCCACCACCTGCTTCTGTTGCAGCTGTTGATTTTCATGGTACTTTGTGGAATTACTAA

Protein sequence

>Msa1212050

MENVSVLSNKEDEKMDLPPGFRFHPTDEELISHYLYKKVIDSNFSARAIGDVDLNKSEPWDLPFKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSVHNLPKAAKNEWVICRVFQKSSAGKKTHISGIMRLDSLGNEFGCSVLPPLTDSSNSIGKIKQLNDSAYVSCFSNSIDVQRNQGGIFDSFNNTIYGGISSHNQLDFFPRISSSNGSLYSNNQGAVNLQYPSSVCGMQDQTILRALYENNGFKTERQQQMMSVSQETDLTTDMNAETCSVVSNFDIGRRTFENNQNRPPPASVAAVDFHGTLWNY*