Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1339450 | XP_003592171.2 | 97.197 | 785 | 22 | 0 | 2 | 786 | 1 | 785 | 0.0 | 1574 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1339450 | sp|Q7ZZ25|ATD1A_DANRE | 40.656 | 305 | 166 | 4 | 453 | 752 | 75 | 369 | 1.41e-69 | 237 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1339450 | G7IDW9 | 97.197 | 785 | 22 | 0 | 2 | 786 | 1 | 785 | 0.0 | 1574 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0038720 | Msa1339450 | 0.927201 | 1.634516e-91 | -8.615850e-47 |
Msa0039330 | Msa1339450 | 0.800392 | 1.472329e-48 | -8.615850e-47 |
Msa0051200 | Msa1339450 | 0.816445 | 5.508694e-52 | -8.615850e-47 |
Msa0051460 | Msa1339450 | 0.820940 | 5.257715e-53 | -8.615850e-47 |
Msa0086590 | Msa1339450 | 0.934890 | 2.001125e-96 | -8.615850e-47 |
Msa0101840 | Msa1339450 | 0.811459 | 6.926752e-51 | -8.615850e-47 |
Msa0102120 | Msa1339450 | 0.803398 | 3.553678e-49 | -8.615850e-47 |
Msa0607540 | Msa1339450 | 0.806338 | 8.634343e-50 | -8.615850e-47 |
Msa0647830 | Msa1339450 | 0.815667 | 8.221679e-52 | -8.615850e-47 |
Msa0650290 | Msa1339450 | 0.821743 | 3.432655e-53 | -8.615850e-47 |
Msa0662560 | Msa1339450 | 0.820310 | 7.340372e-53 | -8.615850e-47 |
Msa0688070 | Msa1339450 | 0.822247 | 2.624099e-53 | -8.615850e-47 |
Msa0690440 | Msa1339450 | 0.825418 | 4.739211e-54 | -8.615850e-47 |
Msa0692200 | Msa1339450 | 0.817204 | 3.722202e-52 | -8.615850e-47 |
Msa0725450 | Msa1339450 | 0.802280 | 6.045492e-49 | -8.615850e-47 |
Msa0735400 | Msa1339450 | 0.804973 | 1.670216e-49 | -8.615850e-47 |
Msa0766630 | Msa1339450 | 0.816720 | 4.780082e-52 | -8.615850e-47 |
Msa0840380 | Msa1339450 | 0.800491 | 1.406022e-48 | -8.615850e-47 |
Msa0132970 | Msa1339450 | 0.802804 | 4.714007e-49 | -8.615850e-47 |
Msa0143920 | Msa1339450 | 0.817481 | 3.225261e-52 | -8.615850e-47 |
Msa0169820 | Msa1339450 | 0.813389 | 2.624122e-51 | -8.615850e-47 |
Msa0200850 | Msa1339450 | 0.804235 | 2.381027e-49 | -8.615850e-47 |
Msa1249490 | Msa1339450 | 0.808897 | 2.470469e-50 | -8.615850e-47 |
Msa1255060 | Msa1339450 | 0.802872 | 4.564216e-49 | -8.615850e-47 |
Msa1288340 | Msa1339450 | 0.808182 | 3.511613e-50 | -8.615850e-47 |
Msa1295510 | Msa1339450 | 0.804054 | 2.597187e-49 | -8.615850e-47 |
Msa1311340 | Msa1339450 | 0.807773 | 4.291295e-50 | -8.615850e-47 |
Msa1339450 | Msa1377070 | 0.816788 | 4.616179e-52 | -8.615850e-47 |
Msa1339450 | Msa1398880 | 0.817276 | 3.585513e-52 | -8.615850e-47 |
Msa1339450 | Msa1426470 | 0.804057 | 2.592585e-49 | -8.615850e-47 |
Msa1339450 | Msa1451620 | -0.804233 | 2.383904e-49 | -8.615850e-47 |
Msa1339450 | Msa1454860 | 0.808534 | 2.954969e-50 | -8.615850e-47 |
Msa0376590 | Msa1339450 | 0.802653 | 5.065065e-49 | -8.615850e-47 |
Msa0403580 | Msa1339450 | 0.810991 | 8.749993e-51 | -8.615850e-47 |
Msa0409200 | Msa1339450 | 0.843748 | 1.157785e-58 | -8.615850e-47 |
Msa0431690 | Msa1339450 | 0.802577 | 5.251253e-49 | -8.615850e-47 |
Msa0438050 | Msa1339450 | 0.828903 | 6.940782e-55 | -8.615850e-47 |
Msa0466120 | Msa1339450 | 0.805542 | 1.269285e-49 | -8.615850e-47 |
Msa1075080 | Msa1339450 | -0.802793 | 4.739720e-49 | -8.615850e-47 |
Msa1084120 | Msa1339450 | 0.821732 | 3.452027e-53 | -8.615850e-47 |
Msa0243480 | Msa1339450 | 0.828092 | 1.089586e-54 | -8.615850e-47 |
Msa0321080 | Msa1339450 | 0.814160 | 1.775068e-51 | -8.615850e-47 |
Msa0347650 | Msa1339450 | 0.805906 | 1.064433e-49 | -8.615850e-47 |
Msa1224340 | Msa1339450 | 0.806491 | 8.016112e-50 | -8.615850e-47 |
Msa1224480 | Msa1339450 | 0.819241 | 1.287543e-52 | -8.615850e-47 |
Msa0553460 | Msa1339450 | 0.823191 | 1.582168e-53 | -8.615850e-47 |
Msa0555720 | Msa1339450 | 0.810553 | 1.088595e-50 | -8.615850e-47 |
Msa0559190 | Msa1339450 | 0.808696 | 2.727968e-50 | -8.615850e-47 |
Msa0574850 | Msa1339450 | 0.807211 | 5.646423e-50 | -8.615850e-47 |
Msa0580000 | Msa1339450 | 0.835140 | 1.995914e-56 | -8.615850e-47 |
Msa0585700 | Msa1339450 | 0.812750 | 3.622342e-51 | -8.615850e-47 |
Msa0965750 | Msa1339450 | 0.800655 | 1.301886e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1339450 | MtrunA17_Chr1g0202381 | 97.197 | 785 | 22 | 0 | 2 | 786 | 1 | 785 | 0.0 | 1574 |
Msa1339450 | MtrunA17_Chr1g0202371 | 67.411 | 761 | 194 | 6 | 30 | 786 | 3 | 713 | 0.0 | 927 |
Msa1339450 | MtrunA17_Chr6g0462581 | 60.303 | 791 | 250 | 8 | 51 | 786 | 32 | 813 | 0.0 | 908 |
Msa1339450 | MtrunA17_Chr5g0397121 | 52.113 | 852 | 316 | 11 | 3 | 786 | 1 | 828 | 0.0 | 843 |
Msa1339450 | MtrunA17_Chr8g0387641 | 49.431 | 878 | 319 | 14 | 3 | 786 | 1 | 847 | 0.0 | 762 |
Msa1339450 | MtrunA17_Chr1g0204031 | 84.615 | 338 | 52 | 0 | 449 | 786 | 537 | 874 | 0.0 | 575 |
Msa1339450 | MtrunA17_Chr1g0195741 | 40.264 | 606 | 281 | 10 | 220 | 786 | 680 | 1243 | 1.28e-136 | 435 |
Msa1339450 | MtrunA17_Chr3g0116131 | 40.759 | 606 | 277 | 10 | 221 | 786 | 644 | 1207 | 6.95e-133 | 424 |
Msa1339450 | MtrunA17_Chr3g0116131 | 46.429 | 84 | 43 | 1 | 77 | 158 | 389 | 472 | 7.78e-13 | 72.4 |
Msa1339450 | MtrunA17_Chr1g0195731 | 38.880 | 607 | 284 | 8 | 222 | 786 | 678 | 1239 | 3.87e-132 | 423 |
Msa1339450 | MtrunA17_Chr4g0038101 | 40.854 | 492 | 240 | 3 | 288 | 778 | 567 | 1008 | 1.29e-118 | 382 |
Msa1339450 | MtrunA17_Chr3g0127401 | 50.394 | 254 | 124 | 2 | 451 | 703 | 63 | 315 | 7.57e-78 | 256 |
Msa1339450 | MtrunA17_Chr3g0127431 | 48.315 | 267 | 135 | 3 | 451 | 715 | 66 | 331 | 3.52e-77 | 255 |
Msa1339450 | MtrunA17_Chr4g0052271 | 44.015 | 259 | 137 | 6 | 469 | 722 | 119 | 374 | 1.17e-62 | 216 |
Msa1339450 | MtrunA17_Chr4g0004121 | 37.349 | 332 | 176 | 7 | 447 | 771 | 221 | 527 | 2.32e-62 | 218 |
Msa1339450 | MtrunA17_Chr6g0459561 | 38.936 | 357 | 169 | 11 | 434 | 771 | 332 | 658 | 4.86e-61 | 218 |
Msa1339450 | MtrunA17_Chr7g0246111 | 41.993 | 281 | 155 | 5 | 417 | 695 | 163 | 437 | 9.72e-60 | 211 |
Msa1339450 | MtrunA17_Chr6g0459541 | 36.088 | 363 | 163 | 12 | 448 | 771 | 11 | 343 | 3.19e-59 | 204 |
Msa1339450 | MtrunA17_Chr4g0026631 | 36.391 | 327 | 183 | 5 | 376 | 694 | 42 | 351 | 1.01e-55 | 197 |
Msa1339450 | MtrunA17_Chr2g0321241 | 35.474 | 327 | 191 | 5 | 376 | 694 | 42 | 356 | 1.71e-55 | 197 |
Msa1339450 | MtrunA17_Chr7g0264521 | 36.458 | 288 | 164 | 8 | 469 | 750 | 479 | 753 | 2.95e-47 | 180 |
Msa1339450 | MtrunA17_Chr7g0264521 | 41.991 | 231 | 125 | 6 | 468 | 694 | 205 | 430 | 2.40e-44 | 171 |
Msa1339450 | MtrunA17_Chr2g0327121 | 37.959 | 245 | 144 | 5 | 469 | 708 | 480 | 721 | 1.14e-46 | 179 |
Msa1339450 | MtrunA17_Chr2g0327121 | 41.739 | 230 | 127 | 5 | 468 | 694 | 206 | 431 | 3.41e-42 | 165 |
Msa1339450 | MtrunA17_Chr1g0180791 | 34.375 | 288 | 171 | 7 | 469 | 750 | 478 | 753 | 5.08e-46 | 176 |
Msa1339450 | MtrunA17_Chr1g0180791 | 41.304 | 230 | 128 | 5 | 468 | 694 | 204 | 429 | 5.59e-44 | 170 |
Msa1339450 | MtrunA17_Chr6g0459551 | 33.535 | 331 | 155 | 8 | 469 | 767 | 102 | 399 | 1.12e-45 | 169 |
Msa1339450 | MtrunA17_Chr6g0459531 | 34.641 | 306 | 141 | 9 | 469 | 771 | 67 | 316 | 1.78e-42 | 157 |
Msa1339450 | MtrunA17_Chr3g0145011 | 37.692 | 260 | 142 | 9 | 463 | 712 | 136 | 385 | 6.49e-41 | 155 |
Msa1339450 | MtrunA17_Chr7g0255721 | 35.312 | 320 | 179 | 9 | 397 | 694 | 598 | 911 | 8.15e-41 | 161 |
Msa1339450 | MtrunA17_Chr7g0255721 | 30.172 | 348 | 215 | 12 | 449 | 782 | 367 | 700 | 6.59e-28 | 120 |
Msa1339450 | MtrunA17_Chr7g0255641 | 38.095 | 231 | 136 | 5 | 468 | 694 | 657 | 884 | 7.32e-40 | 158 |
Msa1339450 | MtrunA17_Chr7g0255641 | 31.900 | 279 | 148 | 10 | 509 | 782 | 432 | 673 | 6.77e-28 | 120 |
Msa1339450 | MtrunA17_Chr8g0362771 | 39.662 | 237 | 136 | 5 | 457 | 690 | 225 | 457 | 9.08e-40 | 157 |
Msa1339450 | MtrunA17_Chr3g0141901 | 37.395 | 238 | 134 | 7 | 463 | 693 | 133 | 362 | 9.61e-40 | 151 |
Msa1339450 | MtrunA17_Chr3g0135761 | 40.506 | 237 | 133 | 6 | 457 | 690 | 210 | 441 | 1.20e-39 | 156 |
Msa1339450 | MtrunA17_Chr3g0135721 | 39.662 | 237 | 135 | 6 | 457 | 690 | 212 | 443 | 3.47e-39 | 155 |
Msa1339450 | MtrunA17_Chr7g0217421 | 41.333 | 225 | 123 | 6 | 469 | 688 | 39 | 259 | 6.17e-39 | 149 |
Msa1339450 | MtrunA17_Chr1g0204051 | 84.000 | 75 | 12 | 0 | 599 | 673 | 1 | 75 | 1.37e-38 | 137 |
Msa1339450 | MtrunA17_Chr7g0262801 | 36.327 | 245 | 146 | 6 | 470 | 708 | 188 | 428 | 4.13e-37 | 145 |
Msa1339450 | MtrunA17_Chr1g0182711 | 35.656 | 244 | 149 | 5 | 470 | 708 | 189 | 429 | 4.37e-37 | 145 |
Msa1339450 | MtrunA17_Chr5g0432631 | 38.589 | 241 | 140 | 6 | 457 | 694 | 217 | 452 | 7.46e-37 | 149 |
Msa1339450 | MtrunA17_Chr4g0052411 | 40.000 | 225 | 126 | 6 | 469 | 688 | 229 | 449 | 1.43e-36 | 147 |
Msa1339450 | MtrunA17_Chr4g0050561 | 36.864 | 236 | 130 | 6 | 470 | 694 | 157 | 384 | 4.08e-36 | 141 |
Msa1339450 | MtrunA17_Chr2g0297281 | 40.000 | 225 | 126 | 6 | 469 | 688 | 286 | 506 | 5.23e-36 | 145 |
Msa1339450 | MtrunA17_Chr3g0143721 | 37.449 | 243 | 139 | 7 | 466 | 699 | 246 | 484 | 7.75e-36 | 145 |
Msa1339450 | MtrunA17_Chr1g0158881 | 38.819 | 237 | 135 | 7 | 457 | 690 | 318 | 547 | 8.02e-36 | 145 |
Msa1339450 | MtrunA17_Chr7g0255651 | 34.559 | 272 | 168 | 6 | 468 | 734 | 281 | 547 | 1.22e-35 | 143 |
Msa1339450 | MtrunA17_Chr7g0255651 | 26.689 | 296 | 175 | 9 | 494 | 781 | 38 | 299 | 9.23e-16 | 81.3 |
Msa1339450 | MtrunA17_Chr5g0429571 | 39.035 | 228 | 127 | 6 | 469 | 688 | 313 | 536 | 2.02e-35 | 144 |
Msa1339450 | MtrunA17_Chr1g0192151 | 36.522 | 230 | 134 | 6 | 471 | 693 | 169 | 393 | 2.83e-35 | 139 |
Msa1339450 | MtrunA17_Chr3g0104211 | 37.226 | 274 | 151 | 10 | 469 | 725 | 304 | 573 | 2.92e-35 | 143 |
Msa1339450 | MtrunA17_Chr4g0014731 | 36.522 | 230 | 134 | 6 | 471 | 693 | 170 | 394 | 3.26e-35 | 139 |
Msa1339450 | MtrunA17_Chr3g0086411 | 32.967 | 273 | 144 | 8 | 453 | 694 | 193 | 457 | 4.27e-35 | 140 |
Msa1339450 | MtrunA17_Chr3g0086411 | 28.829 | 222 | 140 | 5 | 558 | 769 | 7 | 220 | 5.20e-15 | 78.6 |
Msa1339450 | MtrunA17_Chr7g0248361 | 37.991 | 229 | 130 | 7 | 468 | 688 | 191 | 415 | 8.28e-35 | 141 |
Msa1339450 | MtrunA17_Chr8g0345461 | 36.000 | 225 | 136 | 5 | 469 | 688 | 165 | 386 | 9.85e-35 | 137 |
Msa1339450 | MtrunA17_Chr6g0456351 | 39.224 | 232 | 117 | 8 | 469 | 688 | 317 | 536 | 1.50e-34 | 140 |
Msa1339450 | MtrunA17_Chr7g0260601 | 35.808 | 229 | 135 | 6 | 468 | 688 | 239 | 463 | 1.06e-33 | 138 |
Msa1339450 | MtrunA17_Chr2g0327231 | 40.805 | 174 | 94 | 4 | 459 | 630 | 340 | 506 | 1.11e-33 | 136 |
Msa1339450 | MtrunA17_Chr2g0327231 | 43.478 | 92 | 47 | 2 | 468 | 559 | 152 | 238 | 4.61e-14 | 75.5 |
Msa1339450 | MtrunA17_Chr3g0108321 | 37.118 | 229 | 117 | 6 | 431 | 655 | 141 | 346 | 4.81e-33 | 131 |
Msa1339450 | MtrunA17_Chr2g0277831 | 32.026 | 306 | 193 | 7 | 471 | 771 | 245 | 540 | 6.12e-33 | 136 |
Msa1339450 | MtrunA17_Chr2g0277831 | 34.052 | 232 | 142 | 7 | 469 | 694 | 533 | 759 | 2.83e-30 | 128 |
Msa1339450 | MtrunA17_Chr7g0255901 | 36.564 | 227 | 135 | 7 | 469 | 689 | 639 | 862 | 6.53e-33 | 136 |
Msa1339450 | MtrunA17_Chr1g0200081 | 36.000 | 225 | 135 | 6 | 469 | 688 | 175 | 395 | 1.27e-32 | 131 |
Msa1339450 | MtrunA17_Chr6g0476861 | 35.498 | 231 | 137 | 6 | 466 | 688 | 194 | 420 | 1.37e-32 | 134 |
Msa1339450 | MtrunA17_Chr5g0432641 | 37.395 | 238 | 141 | 6 | 460 | 694 | 182 | 414 | 3.56e-31 | 130 |
Msa1339450 | MtrunA17_Chr3g0094871 | 35.242 | 227 | 136 | 6 | 469 | 688 | 11 | 233 | 3.90e-31 | 127 |
Msa1339450 | MtrunA17_Chr4g0033451 | 36.364 | 242 | 135 | 8 | 469 | 698 | 380 | 614 | 1.93e-30 | 129 |
Msa1339450 | MtrunA17_Chr4g0031821 | 35.345 | 232 | 132 | 7 | 468 | 688 | 319 | 543 | 2.05e-30 | 128 |
Msa1339450 | MtrunA17_Chr2g0289231 | 32.189 | 233 | 135 | 7 | 468 | 687 | 296 | 518 | 5.82e-30 | 125 |
Msa1339450 | MtrunA17_Chr3g0129971 | 34.035 | 285 | 158 | 8 | 458 | 721 | 284 | 559 | 1.33e-29 | 126 |
Msa1339450 | MtrunA17_Chr2g0331161 | 33.333 | 237 | 141 | 8 | 467 | 694 | 413 | 641 | 1.91e-29 | 125 |
Msa1339450 | MtrunA17_Chr3g0135781 | 41.420 | 169 | 94 | 4 | 463 | 631 | 49 | 212 | 8.54e-29 | 114 |
Msa1339450 | MtrunA17_Chr7g0255691 | 35.470 | 234 | 143 | 5 | 468 | 696 | 285 | 515 | 9.72e-29 | 121 |
Msa1339450 | MtrunA17_Chr7g0255691 | 31.359 | 287 | 154 | 8 | 504 | 781 | 51 | 303 | 2.28e-26 | 114 |
Msa1339450 | MtrunA17_Chr3g0086401 | 34.043 | 235 | 142 | 6 | 422 | 654 | 345 | 568 | 2.10e-28 | 121 |
Msa1339450 | MtrunA17_Chr3g0086401 | 30.312 | 320 | 193 | 10 | 464 | 769 | 87 | 390 | 1.13e-25 | 113 |
Msa1339450 | MtrunA17_Chr4g0043381 | 30.315 | 254 | 168 | 6 | 471 | 720 | 839 | 1087 | 1.80e-27 | 119 |
Msa1339450 | MtrunA17_Chr8g0388371 | 36.207 | 232 | 133 | 6 | 469 | 688 | 404 | 632 | 1.88e-27 | 119 |
Msa1339450 | MtrunA17_Chr2g0316851 | 32.479 | 234 | 141 | 8 | 471 | 693 | 596 | 823 | 5.82e-26 | 115 |
Msa1339450 | MtrunA17_Chr8g0357301 | 33.636 | 220 | 131 | 7 | 479 | 688 | 480 | 694 | 5.06e-24 | 108 |
Msa1339450 | MtrunA17_Chr4g0047411 | 30.556 | 216 | 125 | 9 | 504 | 699 | 210 | 420 | 1.54e-18 | 90.5 |
Msa1339450 | MtrunA17_Chr1g0204061 | 56.962 | 79 | 16 | 1 | 708 | 786 | 2 | 62 | 3.62e-18 | 79.3 |
Msa1339450 | MtrunA17_Chr1g0190401 | 31.429 | 210 | 130 | 7 | 447 | 651 | 660 | 860 | 7.47e-18 | 89.0 |
Msa1339450 | MtrunA17_Chr4g0062081 | 53.521 | 71 | 32 | 1 | 472 | 542 | 10 | 79 | 8.22e-17 | 76.6 |
Msa1339450 | MtrunA17_Chr1g0168321 | 33.113 | 151 | 91 | 5 | 546 | 688 | 202 | 350 | 3.60e-15 | 79.3 |
Msa1339450 | MtrunA17_Chr6g0450161 | 34.211 | 152 | 92 | 4 | 506 | 655 | 362 | 507 | 2.28e-14 | 77.0 |
Msa1339450 | MtrunA17_Chr5g0404291 | 32.168 | 143 | 91 | 3 | 506 | 647 | 387 | 524 | 6.38e-14 | 75.5 |
Msa1339450 | MtrunA17_Chr4g0039781 | 32.895 | 152 | 94 | 4 | 506 | 655 | 368 | 513 | 1.72e-13 | 74.3 |
Msa1339450 | MtrunA17_Chr3g0116941 | 30.061 | 163 | 95 | 4 | 510 | 655 | 199 | 359 | 4.13e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1339450 | AT4G28000.1 | 54.635 | 809 | 292 | 7 | 48 | 786 | 27 | 830 | 0.0 | 847 |
Msa1339450 | AT4G28000.2 | 54.736 | 813 | 287 | 8 | 48 | 786 | 27 | 832 | 0.0 | 847 |
Msa1339450 | AT1G64110.5 | 54.759 | 809 | 288 | 11 | 47 | 786 | 28 | 827 | 0.0 | 847 |
Msa1339450 | AT1G64110.3 | 54.759 | 809 | 288 | 11 | 47 | 786 | 28 | 827 | 0.0 | 847 |
Msa1339450 | AT1G64110.2 | 54.624 | 811 | 288 | 11 | 47 | 786 | 28 | 829 | 0.0 | 847 |
Msa1339450 | AT1G64110.4 | 54.624 | 811 | 288 | 11 | 47 | 786 | 28 | 829 | 0.0 | 847 |
Msa1339450 | AT1G64110.1 | 54.624 | 811 | 288 | 11 | 47 | 786 | 23 | 824 | 0.0 | 846 |
Msa1339450 | AT5G52882.1 | 55.322 | 808 | 287 | 11 | 48 | 786 | 27 | 829 | 0.0 | 844 |
Msa1339450 | AT4G28000.3 | 53.608 | 776 | 280 | 7 | 48 | 749 | 27 | 796 | 0.0 | 789 |
Msa1339450 | AT1G02890.1 | 41.254 | 606 | 277 | 7 | 221 | 786 | 680 | 1246 | 7.30e-143 | 452 |
Msa1339450 | AT4G02480.1 | 40.661 | 605 | 281 | 7 | 221 | 786 | 700 | 1265 | 1.15e-134 | 431 |
Msa1339450 | AT4G24860.4 | 40.956 | 586 | 265 | 9 | 222 | 779 | 557 | 1089 | 3.22e-128 | 410 |
Msa1339450 | AT4G24860.3 | 41.431 | 601 | 270 | 12 | 206 | 779 | 569 | 1114 | 3.79e-128 | 410 |
Msa1339450 | AT4G24860.2 | 40.956 | 586 | 265 | 9 | 222 | 779 | 580 | 1112 | 3.92e-128 | 410 |
Msa1339450 | AT4G24860.1 | 40.962 | 603 | 272 | 11 | 206 | 779 | 569 | 1116 | 5.73e-128 | 410 |
Msa1339450 | AT1G02890.2 | 38.284 | 606 | 267 | 8 | 221 | 786 | 680 | 1218 | 1.07e-121 | 395 |
Msa1339450 | AT3G19740.1 | 41.870 | 492 | 235 | 8 | 288 | 778 | 547 | 988 | 2.05e-113 | 368 |
Msa1339450 | AT1G50140.2 | 40.580 | 483 | 236 | 5 | 297 | 778 | 544 | 976 | 2.96e-111 | 362 |
Msa1339450 | AT1G50140.5 | 40.580 | 483 | 236 | 5 | 297 | 778 | 544 | 976 | 2.96e-111 | 362 |
Msa1339450 | AT1G50140.3 | 40.580 | 483 | 236 | 5 | 297 | 778 | 566 | 998 | 4.09e-111 | 362 |
Msa1339450 | AT1G50140.1 | 40.580 | 483 | 236 | 5 | 297 | 778 | 566 | 998 | 4.09e-111 | 362 |
Msa1339450 | AT1G50140.4 | 40.580 | 483 | 236 | 5 | 297 | 778 | 566 | 998 | 4.09e-111 | 362 |
Msa1339450 | AT1G62130.2 | 37.986 | 566 | 285 | 11 | 222 | 784 | 533 | 1035 | 2.57e-108 | 355 |
Msa1339450 | AT1G62130.1 | 37.986 | 566 | 285 | 11 | 222 | 784 | 540 | 1042 | 2.89e-108 | 355 |
Msa1339450 | AT4G27680.1 | 48.810 | 252 | 127 | 2 | 451 | 701 | 63 | 313 | 1.21e-75 | 251 |
Msa1339450 | AT5G53540.1 | 46.816 | 267 | 139 | 3 | 451 | 715 | 66 | 331 | 2.30e-75 | 250 |
Msa1339450 | AT1G80350.1 | 39.032 | 310 | 158 | 6 | 469 | 771 | 236 | 521 | 8.85e-62 | 217 |
Msa1339450 | AT2G45500.4 | 45.415 | 229 | 120 | 3 | 469 | 695 | 80 | 305 | 3.06e-61 | 211 |
Msa1339450 | AT2G45500.3 | 45.415 | 229 | 120 | 3 | 469 | 695 | 80 | 305 | 3.06e-61 | 211 |
Msa1339450 | AT2G45500.1 | 45.415 | 229 | 120 | 3 | 469 | 695 | 217 | 442 | 5.80e-60 | 211 |
Msa1339450 | AT2G45500.5 | 45.415 | 229 | 120 | 3 | 469 | 695 | 223 | 448 | 5.89e-60 | 211 |
Msa1339450 | AT2G45500.2 | 45.415 | 229 | 120 | 3 | 469 | 695 | 213 | 438 | 6.03e-60 | 211 |
Msa1339450 | AT2G34560.1 | 40.143 | 279 | 154 | 6 | 428 | 703 | 66 | 334 | 8.33e-60 | 207 |
Msa1339450 | AT2G34560.2 | 40.143 | 279 | 154 | 6 | 428 | 703 | 75 | 343 | 9.07e-60 | 208 |
Msa1339450 | AT3G27120.1 | 42.105 | 304 | 145 | 9 | 449 | 736 | 370 | 658 | 2.51e-59 | 214 |
Msa1339450 | AT2G27600.1 | 36.728 | 324 | 188 | 6 | 376 | 694 | 42 | 353 | 4.46e-57 | 202 |
Msa1339450 | AT3G53230.1 | 37.449 | 243 | 144 | 5 | 469 | 706 | 478 | 717 | 4.97e-45 | 174 |
Msa1339450 | AT3G53230.1 | 41.991 | 231 | 125 | 6 | 468 | 694 | 204 | 429 | 8.77e-44 | 170 |
Msa1339450 | AT3G09840.1 | 35.986 | 289 | 165 | 8 | 469 | 750 | 477 | 752 | 8.47e-45 | 173 |
Msa1339450 | AT3G09840.1 | 41.921 | 229 | 126 | 5 | 469 | 694 | 204 | 428 | 9.56e-44 | 170 |
Msa1339450 | AT5G03340.1 | 34.722 | 288 | 170 | 7 | 469 | 750 | 477 | 752 | 1.22e-44 | 173 |
Msa1339450 | AT5G03340.1 | 41.739 | 230 | 127 | 5 | 468 | 694 | 203 | 428 | 9.88e-44 | 170 |
Msa1339450 | AT3G56690.1 | 35.789 | 285 | 176 | 5 | 468 | 748 | 720 | 1001 | 1.90e-42 | 167 |
Msa1339450 | AT3G56690.1 | 37.688 | 199 | 117 | 5 | 504 | 698 | 415 | 610 | 4.36e-30 | 128 |
Msa1339450 | AT2G26140.1 | 41.350 | 237 | 131 | 6 | 457 | 690 | 212 | 443 | 9.75e-41 | 160 |
Msa1339450 | AT5G43010.1 | 36.842 | 266 | 152 | 8 | 463 | 720 | 133 | 390 | 3.02e-40 | 153 |
Msa1339450 | AT1G45000.1 | 36.194 | 268 | 151 | 9 | 463 | 720 | 133 | 390 | 1.29e-39 | 151 |
Msa1339450 | AT3G01610.2 | 31.629 | 313 | 192 | 7 | 470 | 771 | 231 | 532 | 1.41e-37 | 151 |
Msa1339450 | AT3G01610.2 | 33.891 | 239 | 149 | 6 | 469 | 703 | 525 | 758 | 3.85e-27 | 118 |
Msa1339450 | AT3G01610.1 | 31.629 | 313 | 192 | 7 | 470 | 771 | 231 | 532 | 1.44e-37 | 151 |
Msa1339450 | AT3G01610.1 | 33.891 | 239 | 149 | 6 | 469 | 703 | 525 | 758 | 4.13e-27 | 118 |
Msa1339450 | AT4G29040.1 | 36.364 | 253 | 145 | 6 | 470 | 709 | 186 | 435 | 1.84e-37 | 146 |
Msa1339450 | AT2G20140.1 | 35.968 | 253 | 146 | 6 | 470 | 709 | 186 | 435 | 2.16e-37 | 146 |
Msa1339450 | AT2G30950.1 | 40.000 | 225 | 126 | 6 | 469 | 688 | 224 | 444 | 3.20e-37 | 149 |
Msa1339450 | AT2G30950.2 | 40.000 | 225 | 126 | 6 | 469 | 688 | 224 | 444 | 3.20e-37 | 149 |
Msa1339450 | AT2G30950.3 | 40.000 | 225 | 126 | 6 | 469 | 688 | 224 | 444 | 3.20e-37 | 149 |
Msa1339450 | AT2G30950.4 | 40.000 | 225 | 126 | 6 | 469 | 688 | 228 | 448 | 3.69e-37 | 149 |
Msa1339450 | AT1G06430.1 | 40.000 | 225 | 126 | 6 | 469 | 688 | 217 | 437 | 8.02e-37 | 148 |
Msa1339450 | AT1G06430.3 | 40.000 | 225 | 126 | 6 | 469 | 688 | 217 | 437 | 8.02e-37 | 148 |
Msa1339450 | AT1G06430.2 | 40.000 | 225 | 126 | 6 | 469 | 688 | 217 | 437 | 8.02e-37 | 148 |
Msa1339450 | AT5G53170.1 | 40.084 | 237 | 132 | 7 | 457 | 690 | 348 | 577 | 1.11e-36 | 148 |
Msa1339450 | AT3G05530.1 | 37.826 | 230 | 131 | 6 | 471 | 693 | 170 | 394 | 5.03e-36 | 142 |
Msa1339450 | AT5G42270.1 | 37.860 | 243 | 138 | 7 | 466 | 699 | 244 | 482 | 5.95e-36 | 145 |
Msa1339450 | AT5G19990.2 | 37.768 | 233 | 132 | 6 | 470 | 694 | 101 | 328 | 1.01e-35 | 139 |
Msa1339450 | AT5G19990.1 | 36.864 | 236 | 130 | 6 | 470 | 694 | 159 | 386 | 2.36e-35 | 139 |
Msa1339450 | AT5G19990.3 | 36.864 | 236 | 130 | 6 | 470 | 694 | 159 | 386 | 2.36e-35 | 139 |
Msa1339450 | AT5G20000.1 | 36.864 | 236 | 130 | 6 | 470 | 694 | 159 | 386 | 2.82e-35 | 139 |
Msa1339450 | AT1G50250.1 | 37.037 | 243 | 140 | 7 | 466 | 699 | 256 | 494 | 3.03e-35 | 143 |
Msa1339450 | AT5G15250.1 | 36.641 | 262 | 148 | 7 | 469 | 725 | 221 | 469 | 5.46e-35 | 142 |
Msa1339450 | AT1G09100.1 | 37.118 | 229 | 134 | 6 | 471 | 693 | 169 | 393 | 7.63e-35 | 138 |
Msa1339450 | AT1G53750.1 | 36.000 | 225 | 136 | 5 | 469 | 688 | 165 | 386 | 1.54e-34 | 137 |
Msa1339450 | AT1G03000.1 | 34.074 | 270 | 152 | 9 | 469 | 732 | 655 | 904 | 1.80e-34 | 142 |
Msa1339450 | AT3G02450.1 | 39.823 | 226 | 124 | 7 | 469 | 688 | 331 | 550 | 2.63e-34 | 140 |
Msa1339450 | AT5G58290.1 | 34.783 | 230 | 142 | 5 | 469 | 693 | 152 | 378 | 5.28e-34 | 135 |
Msa1339450 | AT3G47060.1 | 38.158 | 228 | 129 | 6 | 469 | 688 | 322 | 545 | 5.89e-34 | 140 |
Msa1339450 | AT5G58870.1 | 37.719 | 228 | 130 | 6 | 469 | 688 | 326 | 549 | 8.05e-34 | 139 |
Msa1339450 | AT1G53780.1 | 35.268 | 224 | 137 | 5 | 470 | 688 | 338 | 558 | 2.94e-32 | 133 |
Msa1339450 | AT1G53780.4 | 35.268 | 224 | 137 | 5 | 470 | 688 | 338 | 558 | 2.94e-32 | 133 |
Msa1339450 | AT1G53780.3 | 35.268 | 224 | 137 | 5 | 470 | 688 | 337 | 557 | 3.08e-32 | 133 |
Msa1339450 | AT1G53780.2 | 35.268 | 224 | 137 | 5 | 470 | 688 | 359 | 579 | 3.26e-32 | 133 |
Msa1339450 | AT2G29080.1 | 35.965 | 228 | 135 | 6 | 468 | 688 | 318 | 541 | 5.98e-32 | 134 |
Msa1339450 | AT5G15250.2 | 33.684 | 285 | 148 | 8 | 469 | 725 | 221 | 492 | 1.67e-31 | 130 |
Msa1339450 | AT1G05910.1 | 36.100 | 241 | 137 | 7 | 469 | 698 | 378 | 612 | 1.60e-30 | 130 |
Msa1339450 | AT5G08470.3 | 32.530 | 249 | 159 | 6 | 468 | 712 | 831 | 1074 | 2.51e-30 | 129 |
Msa1339450 | AT5G08470.1 | 32.530 | 249 | 159 | 6 | 468 | 712 | 840 | 1083 | 2.61e-30 | 129 |
Msa1339450 | AT1G07510.1 | 34.061 | 229 | 139 | 6 | 468 | 688 | 323 | 547 | 4.60e-30 | 127 |
Msa1339450 | AT5G64580.1 | 35.172 | 290 | 159 | 9 | 458 | 727 | 301 | 581 | 2.45e-29 | 125 |
Msa1339450 | AT3G16290.1 | 33.766 | 231 | 136 | 8 | 467 | 688 | 405 | 627 | 4.72e-29 | 124 |
Msa1339450 | AT4G04180.1 | 31.687 | 243 | 149 | 7 | 468 | 700 | 315 | 550 | 8.58e-29 | 122 |
Msa1339450 | AT4G04180.2 | 31.687 | 243 | 149 | 7 | 468 | 700 | 310 | 545 | 9.68e-29 | 122 |
Msa1339450 | AT4G23940.1 | 35.622 | 233 | 133 | 6 | 469 | 688 | 427 | 655 | 3.47e-28 | 122 |
Msa1339450 | AT2G03670.1 | 33.969 | 262 | 155 | 6 | 468 | 714 | 282 | 540 | 4.25e-28 | 120 |
Msa1339450 | AT2G03670.1 | 32.353 | 238 | 142 | 8 | 462 | 687 | 12 | 242 | 2.84e-25 | 112 |
Msa1339450 | AT1G45000.2 | 40.690 | 145 | 80 | 3 | 463 | 605 | 133 | 273 | 3.94e-26 | 110 |
Msa1339450 | AT2G03670.2 | 32.353 | 238 | 142 | 8 | 462 | 687 | 12 | 242 | 7.51e-26 | 111 |
Msa1339450 | AT2G03670.2 | 39.716 | 141 | 81 | 2 | 468 | 605 | 282 | 421 | 1.60e-17 | 86.3 |
Msa1339450 | AT3G15120.2 | 31.579 | 228 | 141 | 7 | 471 | 688 | 728 | 950 | 2.47e-24 | 110 |
Msa1339450 | AT3G15120.1 | 31.579 | 228 | 141 | 7 | 471 | 688 | 718 | 940 | 2.53e-24 | 110 |
Msa1339450 | AT1G79560.3 | 30.709 | 254 | 151 | 9 | 450 | 688 | 471 | 714 | 2.47e-23 | 106 |
Msa1339450 | AT1G79560.2 | 30.400 | 250 | 157 | 8 | 450 | 688 | 471 | 714 | 2.81e-23 | 106 |
Msa1339450 | AT1G79560.1 | 33.333 | 192 | 115 | 5 | 507 | 688 | 526 | 714 | 2.90e-23 | 106 |
Msa1339450 | AT4G04910.1 | 32.057 | 209 | 117 | 9 | 504 | 692 | 247 | 450 | 2.50e-19 | 93.6 |
Msa1339450 | AT5G08470.2 | 34.783 | 138 | 88 | 2 | 468 | 605 | 840 | 975 | 7.38e-18 | 89.4 |
Msa1339450 | AT3G04340.1 | 31.553 | 206 | 122 | 8 | 469 | 666 | 781 | 975 | 3.03e-17 | 87.4 |
Msa1339450 | AT2G18330.1 | 31.469 | 143 | 92 | 3 | 506 | 647 | 384 | 521 | 8.66e-14 | 75.5 |
Msa1339450 | AT4G36580.1 | 30.769 | 143 | 93 | 3 | 506 | 647 | 381 | 518 | 1.17e-12 | 72.0 |
Msa1339450 | AT3G03060.1 | 32.895 | 152 | 94 | 4 | 506 | 655 | 385 | 530 | 1.31e-12 | 71.6 |
Msa1339450 | AT5G16930.1 | 32.237 | 152 | 95 | 4 | 506 | 655 | 397 | 542 | 1.63e-12 | 71.6 |
Find 181 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCATGTCTTCCATGTTTAA+TGG | 0.178864 | tig0003325:+1877 | None:intergenic |
CTGTCCTTCTTTGACTCTTT+TGG | 0.201063 | tig0003325:+3606 | None:intergenic |
AAGCTATTAAATAAACTTTC+AGG | 0.208762 | tig0003325:-4328 | Msa1339450:CDS |
TGATGTGTCCGTATTAAAAT+TGG | 0.218812 | tig0003325:+866 | None:intergenic |
ACCTCTTGGCCGATATAATT+AGG | 0.231018 | tig0003325:+3951 | None:intergenic |
TCCTCTTAAATGCAAGAAAA+AGG | 0.252734 | tig0003325:+6907 | None:intergenic |
TATCTATACTGAATGATTAA+TGG | 0.260519 | tig0003325:+814 | None:intergenic |
TGAATAGATCTGGTCTTCTA+AGG | 0.262370 | tig0003325:+3291 | None:intergenic |
CTTGGAATATGGTTTGGTTT+TGG | 0.263521 | tig0003325:-6733 | Msa1339450:CDS |
ATCCATCATACCTATGATAA+AGG | 0.272747 | tig0003325:+673 | None:intergenic |
AATGTTGAGAAGGTCTTTCT+TGG | 0.280754 | tig0003325:-4379 | Msa1339450:CDS |
AAAGTTTATTTAATAGCTTT+TGG | 0.282625 | tig0003325:+4332 | None:intergenic |
TGATTGTAGGACTTGGAATA+TGG | 0.291568 | tig0003325:-6744 | Msa1339450:CDS |
CCTGTTGTATTAGTTCCTTA+AGG | 0.295010 | tig0003325:+2097 | None:intergenic |
CTGTTGTATTAGTTCCTTAA+GGG | 0.298402 | tig0003325:+2098 | None:intergenic |
GTCACCTTTATCTCATTTGC+AGG | 0.301816 | tig0003325:+3377 | None:intergenic |
ACCTCATCATGCACCATGTT+TGG | 0.311563 | tig0003325:-719 | Msa1339450:three_prime_UTR |
ATCGATCACGAGTGTGTAAA+AGG | 0.316661 | tig0003325:-6971 | Msa1339450:five_prime_UTR |
ATGAGACTCGTCTCAAAATC+TGG | 0.323469 | tig0003325:-4192 | Msa1339450:CDS |
CCATGTACTGAGTCTGTTCC+AGG | 0.323871 | tig0003325:-3837 | Msa1339450:CDS |
ATGACTTTCCTTATTACTTA+AGG | 0.337948 | tig0003325:-6612 | Msa1339450:intron |
CATGAGAGAGGCAAAGAATA+AGG | 0.339185 | tig0003325:-1860 | Msa1339450:intron |
TTAGGTGTTGGGATTGGATT+AGG | 0.343719 | tig0003325:-6835 | Msa1339450:CDS |
GATTCTTGCAAAAGGGTATC+AGG | 0.346352 | tig0003325:+6991 | None:intergenic |
TTACAATACCTTAAGTAATA+AGG | 0.346523 | tig0003325:+6604 | None:intergenic |
GGCTTAAAATATACATCCTT+TGG | 0.353279 | tig0003325:+835 | None:intergenic |
GTCTTCCGTCTGCAGAAAAC+AGG | 0.355275 | tig0003325:-2333 | Msa1339450:CDS |
CCTTCAAAAGGCGCGATTAG+AGG | 0.356395 | tig0003325:-5115 | Msa1339450:intron |
TCAGTATTTAGTGTTGTGAT+TGG | 0.359890 | tig0003325:-6769 | Msa1339450:CDS |
TCTTACTGGCGAAAGGTTCC+TGG | 0.365302 | tig0003325:+5768 | None:intergenic |
AGCAAAATAGCCCGTCTTAC+TGG | 0.369068 | tig0003325:+5754 | None:intergenic |
AAACTTACTGGTTCTTTCCT+AGG | 0.369969 | tig0003325:+5432 | None:intergenic |
CATCAATGAAAATAATAGTT+GGG | 0.376842 | tig0003325:+3066 | None:intergenic |
CACTATCATCATAAGCTTGC+CGG | 0.384129 | tig0003325:-5623 | Msa1339450:CDS |
TTATGTAAACCCTTTATCAT+AGG | 0.388509 | tig0003325:-683 | Msa1339450:three_prime_UTR |
TGTTAGCAGCATTAGGTGTT+GGG | 0.391492 | tig0003325:-6846 | Msa1339450:CDS |
TATCCCTGCAAATGAGATAA+AGG | 0.392849 | tig0003325:-3381 | Msa1339450:CDS |
GGGTATCAGGATTATTGAAT+TGG | 0.395121 | tig0003325:+7004 | None:intergenic |
AAATGGAATCCTAATTATAT+CGG | 0.396249 | tig0003325:-3960 | Msa1339450:CDS |
TGATGAGGTTACACATTCCT+TGG | 0.396458 | tig0003325:+733 | None:intergenic |
AGGATTCCATTTCGGTACTT+TGG | 0.397845 | tig0003325:+3971 | None:intergenic |
GTTGTGATTGGGTTGATTGT+AGG | 0.399761 | tig0003325:-6757 | Msa1339450:CDS |
TGAGTATTGTCATGTCATTA+TGG | 0.405983 | tig0003325:+4056 | None:intergenic |
GAGTCCTGACAATGCCTTTG+AGG | 0.407577 | tig0003325:-3423 | Msa1339450:CDS |
ACCCTTTATCATAGGTATGA+TGG | 0.411188 | tig0003325:-675 | Msa1339450:three_prime_UTR |
CAGTGTTGATACTCGGTTCC+CGG | 0.411422 | tig0003325:-4303 | Msa1339450:CDS |
AGTAGCAGCACTATAGAGTT+TGG | 0.412869 | tig0003325:-600 | None:intergenic |
GCGACTCGGGAGTTTGTGTC+TGG | 0.413937 | tig0003325:-5163 | Msa1339450:CDS |
TTACGATGACGTAGACTTCC+CGG | 0.415809 | tig0003325:+7089 | None:intergenic |
TTGTTAGCAGCATTAGGTGT+TGG | 0.419051 | tig0003325:-6847 | Msa1339450:CDS |
CCTCATCATGCACCATGTTT+GGG | 0.421086 | tig0003325:-718 | Msa1339450:three_prime_UTR |
GTAGGACTTGGAATATGGTT+TGG | 0.422787 | tig0003325:-6739 | Msa1339450:CDS |
TATCCAAGTCATCACAATAA+AGG | 0.423451 | tig0003325:+4086 | None:intergenic |
TCATCAATGAAAATAATAGT+TGG | 0.428187 | tig0003325:+3065 | None:intergenic |
ATATAATTAGGATTCCATTT+CGG | 0.434004 | tig0003325:+3963 | None:intergenic |
TAGCAGCTTGTGGACTTTGA+AGG | 0.443056 | tig0003325:+4621 | None:intergenic |
TCTCGCTACTTTCACCCTCC+TGG | 0.447184 | tig0003325:+3819 | None:intergenic |
CTGTCAATCCTCCCTTCAAA+AGG | 0.447817 | tig0003325:-5127 | Msa1339450:CDS |
TGGAACAATCTGTACATCCT+TGG | 0.450229 | tig0003325:+4352 | None:intergenic |
CTCAAGAAACTAGTTATTGA+TGG | 0.454343 | tig0003325:-6658 | Msa1339450:CDS |
TCGTGATCGATTCTTGCAAA+AGG | 0.457984 | tig0003325:+6983 | None:intergenic |
TCCATCATACCTATGATAAA+GGG | 0.462777 | tig0003325:+674 | None:intergenic |
AGCATTGTCTTTCCTGTACC+AGG | 0.462796 | tig0003325:+3218 | None:intergenic |
CTCCCGAGTCGCCTCAAAGA+TGG | 0.463149 | tig0003325:+5174 | None:intergenic |
AAGGAATGGAATGATTTGTA+TGG | 0.463735 | tig0003325:-948 | Msa1339450:CDS |
CATTCCTCAAAGGCATTGTC+AGG | 0.467116 | tig0003325:+3419 | None:intergenic |
GATGAGGTTACACATTCCTT+GGG | 0.467690 | tig0003325:+734 | None:intergenic |
CCATCGCCTTTGAATAGATC+TGG | 0.468315 | tig0003325:+3281 | None:intergenic |
ATATAGTGGAAGTGATCTTA+AGG | 0.469929 | tig0003325:-2230 | Msa1339450:intron |
TGACAATAGTCCCTCCCAAC+GGG | 0.470258 | tig0003325:+2965 | None:intergenic |
TGCAGAGGCCACAACCTCTT+CGG | 0.470444 | tig0003325:+4024 | None:intergenic |
CAGTATTTAGTGTTGTGATT+GGG | 0.472370 | tig0003325:-6768 | Msa1339450:CDS |
CGAAAGGTTCCTGGTGTGCT+TGG | 0.479501 | tig0003325:+5777 | None:intergenic |
GCAGCATTAGGTGTTGGGAT+TGG | 0.479886 | tig0003325:-6841 | Msa1339450:CDS |
CTGAGAATCAAATTGTGAAA+GGG | 0.480217 | tig0003325:-6681 | Msa1339450:CDS |
CGACAGATGCAGGGAAAATA+CGG | 0.480874 | tig0003325:-5459 | Msa1339450:intron |
TTGGTTTCTATATCAGAAGC+TGG | 0.482228 | tig0003325:-4424 | Msa1339450:CDS |
ATTGCTTCATCAAGGTCAAA+TGG | 0.485984 | tig0003325:+2900 | None:intergenic |
GTCCATCTTTGAGGCGACTC+GGG | 0.487470 | tig0003325:-5176 | Msa1339450:CDS |
AAATGAATTCATGTCCCGTT+GGG | 0.490057 | tig0003325:-2979 | Msa1339450:CDS |
GTCTTATAATTGCTTCATCA+AGG | 0.490798 | tig0003325:+2892 | None:intergenic |
AAGGCAATTGCAAATGAAGC+TGG | 0.491506 | tig0003325:-3191 | Msa1339450:CDS |
TATCAGGATTATTGAATTGG+TGG | 0.498586 | tig0003325:+7007 | None:intergenic |
TCTGAGAATCAAATTGTGAA+AGG | 0.499291 | tig0003325:-6682 | Msa1339450:CDS |
ATCAACAATGACCAGGTTGA+AGG | 0.500442 | tig0003325:-967 | Msa1339450:CDS |
ATTGGGTTGATTGTAGGACT+TGG | 0.500695 | tig0003325:-6751 | Msa1339450:CDS |
TAATCAGACCGAAGAGGTTG+TGG | 0.501936 | tig0003325:-4032 | Msa1339450:CDS |
TGGAATGATTTGTATGGAGA+AGG | 0.503022 | tig0003325:-942 | Msa1339450:CDS |
GAATAGATCTGGTCTTCTAA+GGG | 0.503077 | tig0003325:+3292 | None:intergenic |
CAATGACCAGGTTGAAGGAA+TGG | 0.505602 | tig0003325:-962 | Msa1339450:CDS |
CCTTAAGGAACTAATACAAC+AGG | 0.508742 | tig0003325:-2097 | Msa1339450:CDS |
TTTCCTACATTCACTCTACA+AGG | 0.509355 | tig0003325:-4580 | Msa1339450:intron |
TTATAAGACGGTTTCAGCGC+AGG | 0.510436 | tig0003325:-2878 | Msa1339450:intron |
TTTATCTTCTTCAGTAGCAA+TGG | 0.511349 | tig0003325:+1924 | None:intergenic |
GATGAAGTTGATAGCATGCT+TGG | 0.511799 | tig0003325:-3047 | Msa1339450:CDS |
GAACCTTTCGCCAGTAAGAC+GGG | 0.513761 | tig0003325:-5764 | Msa1339450:CDS |
GGTCCATCTTTGAGGCGACT+CGG | 0.515920 | tig0003325:-5177 | Msa1339450:CDS |
CCAGATCTATTCAAAGGCGA+TGG | 0.518150 | tig0003325:-3281 | Msa1339450:CDS |
TGACCTTTATTGTGATGACT+TGG | 0.521415 | tig0003325:-4089 | Msa1339450:CDS |
CGTGATCGATTCTTGCAAAA+GGG | 0.523716 | tig0003325:+6984 | None:intergenic |
ACTATGACAGAAGGATATAG+TGG | 0.531817 | tig0003325:-2244 | Msa1339450:CDS |
AGGGAAAATACGGATGTCCT+AGG | 0.532377 | tig0003325:-5449 | Msa1339450:CDS |
TCCCCTCAGGCCATTAAACA+TGG | 0.532782 | tig0003325:-1887 | Msa1339450:CDS |
AAAACCAAAAGAGTCAAAGA+AGG | 0.534966 | tig0003325:-3610 | Msa1339450:CDS |
AAAAGCAATACACCTTTACA+TGG | 0.535114 | tig0003325:+3248 | None:intergenic |
GTTGGGATTGGATTAGGTGT+AGG | 0.536178 | tig0003325:-6829 | Msa1339450:CDS |
AAAGCAATGTGCTAAAGCTC+CGG | 0.537272 | tig0003325:+5604 | None:intergenic |
TTGTCTTATGCATTCCTCAA+AGG | 0.539977 | tig0003325:+3409 | None:intergenic |
CAGATCTATTCAAAGGCGAT+GGG | 0.541649 | tig0003325:-3280 | Msa1339450:CDS |
GGAACCTTTCGCCAGTAAGA+CGG | 0.542315 | tig0003325:-5765 | Msa1339450:CDS |
GGTGTGATCTCGATGTTGTA+AGG | 0.544855 | tig0003325:+4223 | None:intergenic |
TTTCATCGTTCAACAAATTG+GGG | 0.546516 | tig0003325:-6940 | Msa1339450:five_prime_UTR |
ATGAAGTTGATAGCATGCTT+GGG | 0.552044 | tig0003325:-3046 | Msa1339450:CDS |
TTCCATGTTTAATGGCCTGA+GGG | 0.552444 | tig0003325:+1885 | None:intergenic |
AAAATGAATTCATGTCCCGT+TGG | 0.552630 | tig0003325:-2980 | Msa1339450:CDS |
TTGAGACGAGTCTCATCTTG+AGG | 0.554404 | tig0003325:+4199 | None:intergenic |
TGAATTCATGTCCCGTTGGG+AGG | 0.554848 | tig0003325:-2976 | Msa1339450:CDS |
ATACATCAAGAATGTTGAGA+AGG | 0.555187 | tig0003325:-4389 | Msa1339450:CDS |
CCTGGAACAGACTCAGTACA+TGG | 0.556904 | tig0003325:+3837 | None:intergenic |
TCACCTTGTAGAGTGAATGT+AGG | 0.563985 | tig0003325:+4577 | None:intergenic |
ATCAAGGTCAAATGGCATGT+TGG | 0.564434 | tig0003325:+2908 | None:intergenic |
TTGATAGCATGCTTGGGCAG+AGG | 0.565090 | tig0003325:-3040 | Msa1339450:CDS |
TACGATGACGTAGACTTCCC+GGG | 0.566222 | tig0003325:+7090 | None:intergenic |
GAATTCATGTCCCGTTGGGA+GGG | 0.567407 | tig0003325:-2975 | Msa1339450:CDS |
ATCAATGAAAATAATAGTTG+GGG | 0.569905 | tig0003325:+3067 | None:intergenic |
GGGGTTCTGAAGCCATGTAA+AGG | 0.570347 | tig0003325:-3260 | Msa1339450:CDS |
TCAGGATCAGTGTTGATACT+CGG | 0.570543 | tig0003325:-4310 | Msa1339450:CDS |
TCACCTTTATCTCATTTGCA+GGG | 0.572213 | tig0003325:+3378 | None:intergenic |
CCCAAACATGGTGCATGATG+AGG | 0.576291 | tig0003325:+718 | None:intergenic |
GATATGCTGCAGTCATGCAC+AGG | 0.577750 | tig0003325:+2124 | None:intergenic |
AGGAGGTTCAAAGAAGAAAG+AGG | 0.580365 | tig0003325:-922 | Msa1339450:CDS |
AATGATTTGTATGGAGAAGG+AGG | 0.581152 | tig0003325:-939 | Msa1339450:CDS |
ATCATTCCATTCCTTCAACC+TGG | 0.581868 | tig0003325:+956 | None:intergenic |
GGAAAACGTTGTGATGATGA+TGG | 0.583041 | tig0003325:-6887 | Msa1339450:exon |
AAGATCAAGTGATTCCCCTC+AGG | 0.584177 | tig0003325:-1900 | Msa1339450:CDS |
GAATAGATTTATTAATCCCA+AGG | 0.585024 | tig0003325:-750 | Msa1339450:three_prime_UTR |
GGAACTAATACAACAGGAGA+AGG | 0.585212 | tig0003325:-2091 | Msa1339450:CDS |
CAGAAGGATCAACAATGACC+AGG | 0.586376 | tig0003325:-974 | Msa1339450:CDS |
TTGATGAAGCAATTATAAGA+CGG | 0.586784 | tig0003325:-2890 | Msa1339450:CDS |
GGATTATTGAATTGGTGGAA+AGG | 0.586842 | tig0003325:+7012 | None:intergenic |
CTTCCATGTTTAATGGCCTG+AGG | 0.587395 | tig0003325:+1884 | None:intergenic |
TGCAAGCACTTCAGCAATGT+GGG | 0.590921 | tig0003325:+4117 | None:intergenic |
TAGGTGTAGGAGTAGGAACA+TGG | 0.592104 | tig0003325:-6816 | Msa1339450:CDS |
AATTGGTGGAAAGGAGACGA+AGG | 0.594018 | tig0003325:+7021 | None:intergenic |
TGTTGTATTAGTTCCTTAAG+GGG | 0.594732 | tig0003325:+2099 | None:intergenic |
AGAAGACCAGATCTATTCAA+AGG | 0.602438 | tig0003325:-3287 | Msa1339450:CDS |
TTGACAATAGTCCCTCCCAA+CGG | 0.604360 | tig0003325:+2964 | None:intergenic |
GAGCTTTCAACTATGACAGA+AGG | 0.605225 | tig0003325:-2253 | Msa1339450:CDS |
CTGCAAGCACTTCAGCAATG+TGG | 0.605315 | tig0003325:+4116 | None:intergenic |
GTGAGCACAACTCAACGAGA+AGG | 0.606065 | tig0003325:-3007 | Msa1339450:CDS |
GGAGGGTGAAAGTAGCGAGA+AGG | 0.612712 | tig0003325:-3816 | Msa1339450:CDS |
AGACGAGTCTCATCTTGAGG+TGG | 0.616857 | tig0003325:+4202 | None:intergenic |
ATTGGATTAGGTGTAGGAGT+AGG | 0.617096 | tig0003325:-6823 | Msa1339450:CDS |
TCCGTGCCACATTGAAGTGA+TGG | 0.617433 | tig0003325:+3139 | None:intergenic |
ACACATCAATATTTGTCCAA+AGG | 0.620109 | tig0003325:-851 | Msa1339450:three_prime_UTR |
ACGACTTATCCAAGCACACC+AGG | 0.622358 | tig0003325:-5786 | Msa1339450:CDS |
ACTCAAGACTCTCCCAAACA+TGG | 0.622818 | tig0003325:+706 | None:intergenic |
ACCATCACTTCAATGTGGCA+CGG | 0.623773 | tig0003325:-3140 | Msa1339450:CDS |
AATAGATCTGGTCTTCTAAG+GGG | 0.626449 | tig0003325:+3293 | None:intergenic |
GTTGTATTAGTTCCTTAAGG+GGG | 0.626882 | tig0003325:+2100 | None:intergenic |
AGGAAAGACAATGCTTGCAA+AGG | 0.627708 | tig0003325:-3210 | Msa1339450:CDS |
TGAGCACAACTCAACGAGAA+GGG | 0.629917 | tig0003325:-3006 | Msa1339450:CDS |
TCCATGTTTAATGGCCTGAG+GGG | 0.635579 | tig0003325:+1886 | None:intergenic |
TCTTCCGTCTGCAGAAAACA+GGG | 0.635804 | tig0003325:-2332 | Msa1339450:CDS |
GTGTGATCTCGATGTTGTAA+GGG | 0.636414 | tig0003325:+4224 | None:intergenic |
TGTACTGAGTCTGTTCCAGG+AGG | 0.637876 | tig0003325:-3834 | Msa1339450:CDS |
CACATTGAAGTGATGGTGGA+CGG | 0.644880 | tig0003325:+3146 | None:intergenic |
TCCTAATTATATCGGCCAAG+AGG | 0.648909 | tig0003325:-3952 | Msa1339450:intron |
ACGCAAGCGAAAATAGAGCT+CGG | 0.655714 | tig0003325:+3099 | None:intergenic |
TAGCCCGTCTTACTGGCGAA+AGG | 0.662163 | tig0003325:+5761 | None:intergenic |
GTGCCACATTGAAGTGATGG+TGG | 0.666482 | tig0003325:+3142 | None:intergenic |
AGATCTATTCAAAGGCGATG+GGG | 0.674803 | tig0003325:-3279 | Msa1339450:CDS |
ACTCAGTAATCAGACCGAAG+AGG | 0.675248 | tig0003325:-4038 | Msa1339450:CDS |
AAACATGGAAGACATGAGAG+AGG | 0.684136 | tig0003325:-1872 | Msa1339450:CDS |
AGGTCTTTCTTGGATCACCA+AGG | 0.690623 | tig0003325:-4369 | Msa1339450:CDS |
ATTGTCTTTCCTGTACCAGG+AGG | 0.698242 | tig0003325:+3221 | None:intergenic |
AGGTGTAGGAGTAGGAACAT+GGG | 0.703453 | tig0003325:-6815 | Msa1339450:CDS |
GTACTGAGTCTGTTCCAGGA+GGG | 0.704240 | tig0003325:-3833 | Msa1339450:CDS |
GTAGGAGTAGGAACATGGGT+CGG | 0.715086 | tig0003325:-6811 | Msa1339450:CDS |
AAGCACTTCAGCAATGTGGG+TGG | 0.726377 | tig0003325:+4120 | None:intergenic |
CGTCCACCATCACTTCAATG+TGG | 0.732756 | tig0003325:-3145 | Msa1339450:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGCTAAAATTTAATAATTTT+TGG | - | tig0003325:2442-2461 | Msa1339450:intron | 10.0% |
!! | TCAGAAAAAATATGTTAATA+TGG | + | tig0003325:2345-2364 | None:intergenic | 15.0% |
!!! | TCTTATAGTAGTATTTTAAA+AGG | - | tig0003325:2492-2511 | Msa1339450:intron | 15.0% |
!! | AAATAATAAAATCAGTCAAT+GGG | + | tig0003325:2785-2804 | None:intergenic | 15.0% |
!! | AAAATAATAAAATCAGTCAA+TGG | + | tig0003325:2786-2805 | None:intergenic | 15.0% |
!!! | ATTGACTGATTTTATTATTT+TGG | - | tig0003325:2785-2804 | Msa1339450:intron | 15.0% |
!!! | AAAGTTTATTTAATAGCTTT+TGG | + | tig0003325:3361-3380 | None:intergenic | 15.0% |
!!! | CAGTTATATTTTAAATCATA+AGG | + | tig0003325:3413-3432 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTCTTTATTGTC+AGG | - | tig0003325:4041-4060 | Msa1339450:CDS | 15.0% |
!!! | CAATTTAATCATATTTTCAA+AGG | + | tig0003325:5027-5046 | None:intergenic | 15.0% |
!! | TAATAATGTGATTGTTAAAA+TGG | - | tig0003325:5658-5677 | Msa1339450:intron | 15.0% |
!!! | TCTTCTTTTTCTAAAATAAA+TGG | + | tig0003325:5710-5729 | None:intergenic | 15.0% |
!!! | ATTTTAGAAAAAGAAGAAAA+AGG | - | tig0003325:5713-5732 | Msa1339450:intron | 15.0% |
!! | ATGTAATATTCATTGATAAA+TGG | + | tig0003325:6355-6374 | None:intergenic | 15.0% |
!! | TCTTACAAAAAAAAAAAAGA+GGG | + | tig0003325:6524-6543 | None:intergenic | 15.0% |
!! | TTCTTACAAAAAAAAAAAAG+AGG | + | tig0003325:6525-6544 | None:intergenic | 15.0% |
!! | TTACAATACCTTAAGTAATA+AGG | + | tig0003325:1089-1108 | None:intergenic | 20.0% |
!! | TTTCTCTTATGATATAAAAG+GGG | + | tig0003325:1272-1291 | None:intergenic | 20.0% |
!! | GTTTCTCTTATGATATAAAA+GGG | + | tig0003325:1273-1292 | None:intergenic | 20.0% |
!! | AGTTTCTCTTATGATATAAA+AGG | + | tig0003325:1274-1293 | None:intergenic | 20.0% |
!! | ATCATATTGAAACATAAGAT+GGG | + | tig0003325:1817-1836 | None:intergenic | 20.0% |
!! | GCGATAATAATTATGAAATT+AGG | + | tig0003325:2414-2433 | None:intergenic | 20.0% |
!! | AAGTTAGAAAAATTTCACTA+TGG | + | tig0003325:2469-2488 | None:intergenic | 20.0% |
!!! | AAATCTATCACAATTTTTAC+AGG | - | tig0003325:3241-3260 | Msa1339450:CDS | 20.0% |
!! | AAGCTATTAAATAAACTTTC+AGG | - | tig0003325:3362-3381 | Msa1339450:CDS | 20.0% |
!!! | TATATTTTAAATCATAAGGC+CGG | + | tig0003325:3409-3428 | None:intergenic | 20.0% |
!! | ATATAATTAGGATTCCATTT+CGG | + | tig0003325:3730-3749 | None:intergenic | 20.0% |
!! | AAATGGAATCCTAATTATAT+CGG | - | tig0003325:3730-3749 | Msa1339450:intron | 20.0% |
!! | AGACTAAAAAAGAATCAAAA+AGG | - | tig0003325:3906-3925 | Msa1339450:intron | 20.0% |
!! | GACTAAAAAAGAATCAAAAA+GGG | - | tig0003325:3907-3926 | Msa1339450:intron | 20.0% |
!! | ATCAATGAAAATAATAGTTG+GGG | + | tig0003325:4626-4645 | None:intergenic | 20.0% |
!! | CATCAATGAAAATAATAGTT+GGG | + | tig0003325:4627-4646 | None:intergenic | 20.0% |
!! | TCATCAATGAAAATAATAGT+TGG | + | tig0003325:4628-4647 | None:intergenic | 20.0% |
!!! | TTTTCATGATATTTAGTGAT+TGG | - | tig0003325:4919-4938 | Msa1339450:intron | 20.0% |
!!! | GTTTTTGATAAACATAGATT+TGG | - | tig0003325:4967-4986 | Msa1339450:intron | 20.0% |
!!! | GTTAATTTTTTCTGAAGTAA+AGG | - | tig0003325:4989-5008 | Msa1339450:intron | 20.0% |
!!! | GATCTTAAGGTTAATTTTAT+TGG | - | tig0003325:5473-5492 | Msa1339450:intron | 20.0% |
!!! | TTTGTCTTTAATATTTTACC+AGG | + | tig0003325:6200-6219 | None:intergenic | 20.0% |
!! | AATATTCATTGATAAATGGA+AGG | + | tig0003325:6351-6370 | None:intergenic | 20.0% |
!! | TATCAATGAATATTACATCA+TGG | - | tig0003325:6357-6376 | Msa1339450:intron | 20.0% |
!!! | AATGATACATTATTTTGTTG+AGG | - | tig0003325:6558-6577 | Msa1339450:intron | 20.0% |
!!! | TTTTTATGCATAGAAATTGA+TGG | - | tig0003325:6656-6675 | Msa1339450:CDS | 20.0% |
!! | TATCTATACTGAATGATTAA+TGG | + | tig0003325:6879-6898 | None:intergenic | 20.0% |
!! | TTTTCATCGTTCAACAAATT+GGG | - | tig0003325:749-768 | Msa1339450:three_prime_UTR | 25.0% |
! | ATGACTTTCCTTATTACTTA+AGG | - | tig0003325:1078-1097 | Msa1339450:intron | 25.0% |
! | ATCGTGTAAAACAACAAATA+TGG | + | tig0003325:1353-1372 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | - | tig0003325:1568-1587 | Msa1339450:intron | 25.0% |
! | TCATATTGAAACATAAGATG+GGG | + | tig0003325:1816-1835 | None:intergenic | 25.0% |
! | CATCATATTGAAACATAAGA+TGG | + | tig0003325:1818-1837 | None:intergenic | 25.0% |
!! | TTCTCATGCGAAAATTATTT+TGG | - | tig0003325:1996-2015 | Msa1339450:intron | 25.0% |
! | GAACTTGAATGTTAATATAC+AGG | + | tig0003325:2962-2981 | None:intergenic | 25.0% |
! | TTGTGCATGATATTATAATG+AGG | - | tig0003325:2996-3015 | Msa1339450:CDS | 25.0% |
! | ATAACTAATCCTATGTTGTT+AGG | - | tig0003325:3186-3205 | Msa1339450:CDS | 25.0% |
! | CAAATATATCCTAACAACAT+AGG | + | tig0003325:3198-3217 | None:intergenic | 25.0% |
!!! | ATATTTTAAATCATAAGGCC+GGG | + | tig0003325:3408-3427 | None:intergenic | 25.0% |
!! | CAATAAGAGAAAAGTTTTTC+TGG | - | tig0003325:3793-3812 | Msa1339450:CDS | 25.0% |
! | TCTAATGAATCATTATGCTT+TGG | + | tig0003325:3952-3971 | None:intergenic | 25.0% |
!! | AGAACAATAATTTTCTCATC+AGG | + | tig0003325:4754-4773 | None:intergenic | 25.0% |
! | TTGATGAAGCAATTATAAGA+CGG | - | tig0003325:4800-4819 | Msa1339450:intron | 25.0% |
!! | ATGATATTTAGTGATTGGTT+AGG | - | tig0003325:4924-4943 | Msa1339450:intron | 25.0% |
!!! | TAATGTTAGTTTCTAGGATT+TGG | + | tig0003325:5144-5163 | None:intergenic | 25.0% |
! | TCATTCAGTGCTAAAAATTA+AGG | + | tig0003325:5220-5239 | None:intergenic | 25.0% |
! | TAAGTTGTTTATCCATACAA+AGG | - | tig0003325:6138-6157 | Msa1339450:intron | 25.0% |
!! | GAGGAATTCTTATTTCTTAA+AGG | - | tig0003325:6233-6252 | Msa1339450:intron | 25.0% |
! | TAACTTTCATAAGTTATTCC+AGG | - | tig0003325:6301-6320 | Msa1339450:intron | 25.0% |
! | AGACATTCATTCTTACAAAT+GGG | + | tig0003325:6613-6632 | None:intergenic | 25.0% |
! | AAGACATTCATTCTTACAAA+TGG | + | tig0003325:6614-6633 | None:intergenic | 25.0% |
! | CATAAAAATAATCATTCAGC+TGG | + | tig0003325:6644-6663 | None:intergenic | 25.0% |
!!! | CAGTTATTTCTTTTAGATTG+TGG | - | tig0003325:6798-6817 | Msa1339450:CDS | 25.0% |
! | GAATAGATTTATTAATCCCA+AGG | - | tig0003325:6940-6959 | Msa1339450:five_prime_UTR | 25.0% |
! | TTATGTAAACCCTTTATCAT+AGG | - | tig0003325:7007-7026 | Msa1339450:five_prime_UTR | 25.0% |
TATCAGGATTATTGAATTGG+TGG | + | tig0003325:686-705 | None:intergenic | 30.0% | |
! | CTTTTCATCGTTCAACAAAT+TGG | - | tig0003325:748-767 | Msa1339450:three_prime_UTR | 30.0% |
TTTCATCGTTCAACAAATTG+GGG | - | tig0003325:750-769 | Msa1339450:three_prime_UTR | 30.0% | |
! | TCCTTTTTCTTGCATTTAAG+AGG | - | tig0003325:782-801 | Msa1339450:three_prime_UTR | 30.0% |
TCCTCTTAAATGCAAGAAAA+AGG | + | tig0003325:786-805 | None:intergenic | 30.0% | |
TCAGTATTTAGTGTTGTGAT+TGG | - | tig0003325:921-940 | Msa1339450:CDS | 30.0% | |
CAGTATTTAGTGTTGTGATT+GGG | - | tig0003325:922-941 | Msa1339450:CDS | 30.0% | |
TCTGAGAATCAAATTGTGAA+AGG | - | tig0003325:1008-1027 | Msa1339450:intron | 30.0% | |
CTGAGAATCAAATTGTGAAA+GGG | - | tig0003325:1009-1028 | Msa1339450:intron | 30.0% | |
CTCAAGAAACTAGTTATTGA+TGG | - | tig0003325:1032-1051 | Msa1339450:intron | 30.0% | |
!!! | ATAAGTTTTGAGAGACTGTT+TGG | - | tig0003325:1400-1419 | Msa1339450:intron | 30.0% |
!!! | TAAGTTTTGAGAGACTGTTT+GGG | - | tig0003325:1401-1420 | Msa1339450:intron | 30.0% |
!! | TTGACTAGTTTCATGAACTA+TGG | - | tig0003325:1638-1657 | Msa1339450:intron | 30.0% |
ATATTGAAACATAAGATGGG+GGG | + | tig0003325:1814-1833 | None:intergenic | 30.0% | |
CATATTGAAACATAAGATGG+GGG | + | tig0003325:1815-1834 | None:intergenic | 30.0% | |
! | AAAATTTTGTTGACAAGTGC+TGG | - | tig0003325:1861-1880 | Msa1339450:CDS | 30.0% |
!! | TATTGCTCACTTTTCTTTGA+AGG | - | tig0003325:2132-2151 | Msa1339450:intron | 30.0% |
!! | TTTTAAAAGGTCCATCTTTG+AGG | - | tig0003325:2505-2524 | Msa1339450:intron | 30.0% |
AGTAAGCATGTTATTGTGAA+AGG | + | tig0003325:3027-3046 | None:intergenic | 30.0% | |
! | ATCACAATTTTTACAGGTCT+TGG | - | tig0003325:3247-3266 | Msa1339450:CDS | 30.0% |
ATACATCAAGAATGTTGAGA+AGG | - | tig0003325:3301-3320 | Msa1339450:CDS | 30.0% | |
!!! | AGTGAGTTTTTCATTGACTT+TGG | + | tig0003325:3438-3457 | None:intergenic | 30.0% |
!!! | TTTTCATGGCCTTTTTTAGT+TGG | + | tig0003325:3529-3548 | None:intergenic | 30.0% |
!! | TTTCAAGTGAGTCTTTTTCA+TGG | + | tig0003325:3543-3562 | None:intergenic | 30.0% |
TATCCAAGTCATCACAATAA+AGG | + | tig0003325:3607-3626 | None:intergenic | 30.0% | |
! | TGAGTATTGTCATGTCATTA+TGG | + | tig0003325:3637-3656 | None:intergenic | 30.0% |
! | TGCAATTTTTCATCACTTGA+AGG | - | tig0003325:3685-3704 | Msa1339450:intron | 30.0% |
! | ATTTCGGTACTTTGGATTTT+TGG | + | tig0003325:3714-3733 | None:intergenic | 30.0% |
!! | AAAAATCCAAAGTACCGAAA+TGG | - | tig0003325:3713-3732 | Msa1339450:intron | 30.0% |
!!! | GTTTTTCTGGTTACTAAGAT+TGG | - | tig0003325:3806-3825 | Msa1339450:CDS | 30.0% |
GGTTACTAAGATTGGATATA+TGG | - | tig0003325:3814-3833 | Msa1339450:CDS | 30.0% | |
AAAACCAAAAGAGTCAAAGA+AGG | - | tig0003325:4080-4099 | Msa1339450:CDS | 30.0% | |
CGGAAACAAGTTAAACATAA+AGG | + | tig0003325:4210-4229 | None:intergenic | 30.0% | |
!!! | AAGGTGACTTTTTCAGATAT+CGG | - | tig0003325:4328-4347 | Msa1339450:CDS | 30.0% |
AAAAGCAATACACCTTTACA+TGG | + | tig0003325:4445-4464 | None:intergenic | 30.0% | |
!! | TGTAAAGGTGTATTGCTTTT+TGG | - | tig0003325:4445-4464 | Msa1339450:intron | 30.0% |
GTCTTATAATTGCTTCATCA+AGG | + | tig0003325:4801-4820 | None:intergenic | 30.0% | |
CAATTGCAATCATTTGAACA+AGG | - | tig0003325:4882-4901 | Msa1339450:intron | 30.0% | |
! | AGTGGATAATGTTAGTTTCT+AGG | + | tig0003325:5150-5169 | None:intergenic | 30.0% |
!!! | TTCTTGCACGGTTTTTTTAT+AGG | + | tig0003325:5189-5208 | None:intergenic | 30.0% |
AAATCAAACCGTGTAACAAT+AGG | + | tig0003325:5256-5275 | None:intergenic | 30.0% | |
! | ATATAGTGGAAGTGATCTTA+AGG | - | tig0003325:5460-5479 | Msa1339450:intron | 30.0% |
TGTTGTATTAGTTCCTTAAG+GGG | + | tig0003325:5594-5613 | None:intergenic | 30.0% | |
CTGTTGTATTAGTTCCTTAA+GGG | + | tig0003325:5595-5614 | None:intergenic | 30.0% | |
TTTATCTTCTTCAGTAGCAA+TGG | + | tig0003325:5769-5788 | None:intergenic | 30.0% | |
TTTCTATAAGTACTCGCAAA+CGG | + | tig0003325:5955-5974 | None:intergenic | 30.0% | |
GACAAACATCATTACTATTG+AGG | - | tig0003325:6214-6233 | Msa1339450:intron | 30.0% | |
! | CTTATTTCTTAAAGGTGACT+CGG | - | tig0003325:6241-6260 | Msa1339450:intron | 30.0% |
! | TTATTTCTTAAAGGTGACTC+GGG | - | tig0003325:6242-6261 | Msa1339450:intron | 30.0% |
TAATTGAAAGTTGAAACTCC+TGG | + | tig0003325:6322-6341 | None:intergenic | 30.0% | |
TCATTGATAAATGGAAGGTA+GGG | + | tig0003325:6346-6365 | None:intergenic | 30.0% | |
TTCATTGATAAATGGAAGGT+AGG | + | tig0003325:6347-6366 | None:intergenic | 30.0% | |
!!! | TCTTATTTTGACCATCAAAC+AGG | + | tig0003325:6424-6443 | None:intergenic | 30.0% |
! | AAGGAATGGAATGATTTGTA+TGG | - | tig0003325:6742-6761 | Msa1339450:CDS | 30.0% |
!! | TGTGGAAGCCAATTTTAATA+CGG | - | tig0003325:6816-6835 | Msa1339450:CDS | 30.0% |
TGATGTGTCCGTATTAAAAT+TGG | + | tig0003325:6827-6846 | None:intergenic | 30.0% | |
ACACATCAATATTTGTCCAA+AGG | - | tig0003325:6839-6858 | Msa1339450:CDS | 30.0% | |
GGCTTAAAATATACATCCTT+TGG | + | tig0003325:6858-6877 | None:intergenic | 30.0% | |
TCCATCATACCTATGATAAA+GGG | + | tig0003325:7019-7038 | None:intergenic | 30.0% | |
ATCCATCATACCTATGATAA+AGG | + | tig0003325:7020-7039 | None:intergenic | 30.0% | |
! | CGTCATCGTAACAAAGTTTT+TGG | - | tig0003325:613-632 | Msa1339450:three_prime_UTR | 35.0% |
GGATTATTGAATTGGTGGAA+AGG | + | tig0003325:681-700 | None:intergenic | 35.0% | |
GGGTATCAGGATTATTGAAT+TGG | + | tig0003325:689-708 | None:intergenic | 35.0% | |
!!! | GTTTTGTTGTTAGCAGCATT+AGG | - | tig0003325:837-856 | Msa1339450:three_prime_UTR | 35.0% |
TGATTGTAGGACTTGGAATA+TGG | - | tig0003325:946-965 | Msa1339450:CDS | 35.0% | |
!!! | CTTGGAATATGGTTTGGTTT+TGG | - | tig0003325:957-976 | Msa1339450:CDS | 35.0% |
GTAGGTATGCTATAAGTGAT+TGG | + | tig0003325:1376-1395 | None:intergenic | 35.0% | |
CTCTCAAAACTTATGCTAGT+AGG | + | tig0003325:1394-1413 | None:intergenic | 35.0% | |
AAACCAATTCCACATGTGAT+AGG | + | tig0003325:1702-1721 | None:intergenic | 35.0% | |
! | ATGTGGAATTGGTTTAGCTT+TGG | - | tig0003325:1707-1726 | Msa1339450:intron | 35.0% |
TCTTGGCAAATGCATGAATT+GGG | + | tig0003325:1759-1778 | None:intergenic | 35.0% | |
TTCTTGGCAAATGCATGAAT+TGG | + | tig0003325:1760-1779 | None:intergenic | 35.0% | |
TGGGGGGTTAAATTTAATCA+GGG | + | tig0003325:1798-1817 | None:intergenic | 35.0% | |
ATGGGGGGTTAAATTTAATC+AGG | + | tig0003325:1799-1818 | None:intergenic | 35.0% | |
TGTCGAAGTGAAAACATGAA+AGG | + | tig0003325:2216-2235 | None:intergenic | 35.0% | |
!! | AAACTTACTGGTTCTTTCCT+AGG | + | tig0003325:2261-2280 | None:intergenic | 35.0% |
ACCTTCTAATGCAAGTTGTT+AGG | - | tig0003325:2746-2765 | Msa1339450:intron | 35.0% | |
ATCAAAAAAGTAGCAGCTTG+TGG | + | tig0003325:3082-3101 | None:intergenic | 35.0% | |
TTTCCTACATTCACTCTACA+AGG | - | tig0003325:3110-3129 | Msa1339450:CDS | 35.0% | |
TTGGTTTCTATATCAGAAGC+TGG | - | tig0003325:3266-3285 | Msa1339450:CDS | 35.0% | |
AATGTTGAGAAGGTCTTTCT+TGG | - | tig0003325:3311-3330 | Msa1339450:CDS | 35.0% | |
CTGGAAAAGCCAACTAAAAA+AGG | - | tig0003325:3517-3536 | Msa1339450:intron | 35.0% | |
TGACCTTTATTGTGATGACT+TGG | - | tig0003325:3601-3620 | Msa1339450:CDS | 35.0% | |
CAAGTGATGAAAAATTGCAG+AGG | + | tig0003325:3684-3703 | None:intergenic | 35.0% | |
TAGCAGCAATGCAAAACAAA+CGG | + | tig0003325:4230-4249 | None:intergenic | 35.0% | |
TTGTCTTATGCATTCCTCAA+AGG | + | tig0003325:4284-4303 | None:intergenic | 35.0% | |
TATCCCTGCAAATGAGATAA+AGG | - | tig0003325:4309-4328 | Msa1339450:CDS | 35.0% | |
TCACCTTTATCTCATTTGCA+GGG | + | tig0003325:4315-4334 | None:intergenic | 35.0% | |
!! | TTTTTCAGATATCGGTGCTT+TGG | - | tig0003325:4336-4355 | Msa1339450:CDS | 35.0% |
! | AATAGATCTGGTCTTCTAAG+GGG | + | tig0003325:4400-4419 | None:intergenic | 35.0% |
! | GAATAGATCTGGTCTTCTAA+GGG | + | tig0003325:4401-4420 | None:intergenic | 35.0% |
! | TGAATAGATCTGGTCTTCTA+AGG | + | tig0003325:4402-4421 | None:intergenic | 35.0% |
AGAAGACCAGATCTATTCAA+AGG | - | tig0003325:4403-4422 | Msa1339450:CDS | 35.0% | |
!! | ATGAAGTTGATAGCATGCTT+GGG | - | tig0003325:4644-4663 | Msa1339450:intron | 35.0% |
AAAATGAATTCATGTCCCGT+TGG | - | tig0003325:4710-4729 | Msa1339450:intron | 35.0% | |
AAATGAATTCATGTCCCGTT+GGG | - | tig0003325:4711-4730 | Msa1339450:intron | 35.0% | |
ATTGCTTCATCAAGGTCAAA+TGG | + | tig0003325:4793-4812 | None:intergenic | 35.0% | |
GGCAAATGTTCGTAAATTAG+TGG | + | tig0003325:5168-5187 | None:intergenic | 35.0% | |
ACTATGACAGAAGGATATAG+TGG | - | tig0003325:5446-5465 | Msa1339450:CDS | 35.0% | |
!! | ATTTCTAGTTCCCTACTTGT+TGG | - | tig0003325:5505-5524 | Msa1339450:intron | 35.0% |
ATTATCACCACCAACAAGTA+GGG | + | tig0003325:5518-5537 | None:intergenic | 35.0% | |
GTTGTATTAGTTCCTTAAGG+GGG | + | tig0003325:5593-5612 | None:intergenic | 35.0% | |
CCTGTTGTATTAGTTCCTTA+AGG | + | tig0003325:5596-5615 | None:intergenic | 35.0% | |
CCTTAAGGAACTAATACAAC+AGG | - | tig0003325:5593-5612 | Msa1339450:CDS | 35.0% | |
ACAGGAGAAGGAAAAAGAAA+TGG | - | tig0003325:5611-5630 | Msa1339450:CDS | 35.0% | |
CTCATGTCTTCCATGTTTAA+TGG | + | tig0003325:5816-5835 | None:intergenic | 35.0% | |
ACTTCAATTGCTGTAGAGTT+AGG | - | tig0003325:5875-5894 | Msa1339450:intron | 35.0% | |
CTTCAATTGCTGTAGAGTTA+GGG | - | tig0003325:5876-5895 | Msa1339450:intron | 35.0% | |
! | GCTTATTTGAGTTTATCGAC+TGG | - | tig0003325:5912-5931 | Msa1339450:intron | 35.0% |
AATAGGCTGAAAACAGCTTA+TGG | + | tig0003325:5991-6010 | None:intergenic | 35.0% | |
CTTGAAGAGCTTATGGAAAT+AGG | + | tig0003325:6008-6027 | None:intergenic | 35.0% | |
AAGCTATCTTGAAGAGCTTA+TGG | + | tig0003325:6015-6034 | None:intergenic | 35.0% | |
! | ATATTTTACCAGGCAGTACA+AGG | + | tig0003325:6190-6209 | None:intergenic | 35.0% |
GGGAATAGATATGTGGAATT+TGG | - | tig0003325:6262-6281 | Msa1339450:intron | 35.0% | |
! | CTTCTCTAGGAATACACTTA+GGG | - | tig0003325:6398-6417 | Msa1339450:intron | 35.0% |
GAGACAGGATATGAATATGA+TGG | + | tig0003325:6464-6483 | None:intergenic | 35.0% | |
TCTCTCTTATCAGATAGCAA+TGG | + | tig0003325:6490-6509 | None:intergenic | 35.0% | |
ATGGATGCATGTGTAAATAC+AGG | - | tig0003325:6675-6694 | Msa1339450:CDS | 35.0% | |
! | TGGAATGATTTGTATGGAGA+AGG | - | tig0003325:6748-6767 | Msa1339450:CDS | 35.0% |
! | AATGATTTGTATGGAGAAGG+AGG | - | tig0003325:6751-6770 | Msa1339450:CDS | 35.0% |
ACCCTTTATCATAGGTATGA+TGG | - | tig0003325:7015-7034 | Msa1339450:five_prime_UTR | 35.0% | |
!! | GATTCTTGCAAAAGGGTATC+AGG | + | tig0003325:702-721 | None:intergenic | 40.0% |
! | CGTGATCGATTCTTGCAAAA+GGG | + | tig0003325:709-728 | None:intergenic | 40.0% |
! | TCGTGATCGATTCTTGCAAA+AGG | + | tig0003325:710-729 | None:intergenic | 40.0% |
ATCGATCACGAGTGTGTAAA+AGG | - | tig0003325:719-738 | Msa1339450:three_prime_UTR | 40.0% | |
! | GGAAAACGTTGTGATGATGA+TGG | - | tig0003325:803-822 | Msa1339450:three_prime_UTR | 40.0% |
TTGTTAGCAGCATTAGGTGT+TGG | - | tig0003325:843-862 | Msa1339450:three_prime_UTR | 40.0% | |
TGTTAGCAGCATTAGGTGTT+GGG | - | tig0003325:844-863 | Msa1339450:three_prime_UTR | 40.0% | |
!! | TTAGGTGTTGGGATTGGATT+AGG | - | tig0003325:855-874 | Msa1339450:three_prime_UTR | 40.0% |
! | ATTGGATTAGGTGTAGGAGT+AGG | - | tig0003325:867-886 | Msa1339450:three_prime_UTR | 40.0% |
!! | GTTGTGATTGGGTTGATTGT+AGG | - | tig0003325:933-952 | Msa1339450:CDS | 40.0% |
!! | ATTGGGTTGATTGTAGGACT+TGG | - | tig0003325:939-958 | Msa1339450:CDS | 40.0% |
GTAGGACTTGGAATATGGTT+TGG | - | tig0003325:951-970 | Msa1339450:CDS | 40.0% | |
!!! | GGAATATGGTTTGGTTTTGG+AGG | - | tig0003325:960-979 | Msa1339450:CDS | 40.0% |
TTATATCACACCGAAAAGCG+CGG | + | tig0003325:1223-1242 | None:intergenic | 40.0% | |
TTCTCAAGTCCTATCACATG+TGG | - | tig0003325:1690-1709 | Msa1339450:intron | 40.0% | |
AGTCCTATCACATGTGGAAT+TGG | - | tig0003325:1696-1715 | Msa1339450:intron | 40.0% | |
GGGAAGAAGAAGGTTATTCT+TGG | + | tig0003325:1776-1795 | None:intergenic | 40.0% | |
TTTAATCAGGGGGAAGAAGA+AGG | + | tig0003325:1786-1805 | None:intergenic | 40.0% | |
GGGGGTTAAATTTAATCAGG+GGG | + | tig0003325:1796-1815 | None:intergenic | 40.0% | |
GGGGGGTTAAATTTAATCAG+GGG | + | tig0003325:1797-1816 | None:intergenic | 40.0% | |
TCGCATGAGAAGACAAGATT+TGG | + | tig0003325:1987-2006 | None:intergenic | 40.0% | |
CACTATCATCATAAGCTTGC+CGG | - | tig0003325:2067-2086 | Msa1339450:intron | 40.0% | |
AAAGCAATGTGCTAAAGCTC+CGG | + | tig0003325:2089-2108 | None:intergenic | 40.0% | |
! | TTTTCACTTCGACAGATGCA+GGG | - | tig0003325:2222-2241 | Msa1339450:intron | 40.0% |
GTGGAACAGACAAAACTTAC+TGG | + | tig0003325:2273-2292 | None:intergenic | 40.0% | |
TGCAAAGCTGAAGTGAAATG+TGG | + | tig0003325:2292-2311 | None:intergenic | 40.0% | |
ACAATTGTGCACTTCAGTGT+AGG | + | tig0003325:2384-2403 | None:intergenic | 40.0% | |
!! | TTTTGAAGGGAGGATTGACA+GGG | + | tig0003325:2564-2583 | None:intergenic | 40.0% |
GCCTAACAACTTGCATTAGA+AGG | + | tig0003325:2750-2769 | None:intergenic | 40.0% | |
AGTCAATGGGAATGTTGAGT+AGG | + | tig0003325:2772-2791 | None:intergenic | 40.0% | |
GCTAAGAGAATCTTACTGAC+AGG | + | tig0003325:2914-2933 | None:intergenic | 40.0% | |
TCACCTTGTAGAGTGAATGT+AGG | + | tig0003325:3116-3135 | None:intergenic | 40.0% | |
TGGAACAATCTGTACATCCT+TGG | + | tig0003325:3341-3360 | None:intergenic | 40.0% | |
!! | TCAGGATCAGTGTTGATACT+CGG | - | tig0003325:3380-3399 | Msa1339450:CDS | 40.0% |
GTGTGATCTCGATGTTGTAA+GGG | + | tig0003325:3469-3488 | None:intergenic | 40.0% | |
ATGAGACTCGTCTCAAAATC+TGG | - | tig0003325:3498-3517 | Msa1339450:intron | 40.0% | |
AGGATTCCATTTCGGTACTT+TGG | + | tig0003325:3722-3741 | None:intergenic | 40.0% | |
TCCTAATTATATCGGCCAAG+AGG | - | tig0003325:3738-3757 | Msa1339450:intron | 40.0% | |
ACCTCTTGGCCGATATAATT+AGG | + | tig0003325:3742-3761 | None:intergenic | 40.0% | |
TTATATCGGCCAAGAGGTAA+AGG | - | tig0003325:3744-3763 | Msa1339450:intron | 40.0% | |
!!! | ACTATCACGCTTTTTCAGCT+TGG | + | tig0003325:3983-4002 | None:intergenic | 40.0% |
! | CTGTCCTTCTTTGACTCTTT+TGG | + | tig0003325:4087-4106 | None:intergenic | 40.0% |
GTCACCTTTATCTCATTTGC+AGG | + | tig0003325:4316-4335 | None:intergenic | 40.0% | |
CAGATCTATTCAAAGGCGAT+GGG | - | tig0003325:4410-4429 | Msa1339450:CDS | 40.0% | |
AGATCTATTCAAAGGCGATG+GGG | - | tig0003325:4411-4430 | Msa1339450:CDS | 40.0% | |
AGGAAAGACAATGCTTGCAA+AGG | - | tig0003325:4480-4499 | Msa1339450:intron | 40.0% | |
AAGGCAATTGCAAATGAAGC+TGG | - | tig0003325:4499-4518 | Msa1339450:intron | 40.0% | |
!! | GATGAAGTTGATAGCATGCT+TGG | - | tig0003325:4643-4662 | Msa1339450:intron | 40.0% |
ATCAAGGTCAAATGGCATGT+TGG | + | tig0003325:4785-4804 | None:intergenic | 40.0% | |
CATGATTCAGGACAAATGTG+TGG | + | tig0003325:4843-4862 | None:intergenic | 40.0% | |
GCAACAGATGATCATGATTC+AGG | + | tig0003325:4855-4874 | None:intergenic | 40.0% | |
AGAAACTGACCAGAAGTTTC+AGG | - | tig0003325:5116-5135 | Msa1339450:CDS | 40.0% | |
GAAACTGACCAGAAGTTTCA+GGG | - | tig0003325:5117-5136 | Msa1339450:CDS | 40.0% | |
AAGGAGCTGTTATTCTTGCA+CGG | + | tig0003325:5201-5220 | None:intergenic | 40.0% | |
! | CACTGAATGAAGCATCTCTT+AGG | - | tig0003325:5230-5249 | Msa1339450:intron | 40.0% |
CTCTTAGGCCTATTGTTACA+CGG | - | tig0003325:5245-5264 | Msa1339450:intron | 40.0% | |
GTGCTTGACATTTGTGTTCA+TGG | - | tig0003325:5310-5329 | Msa1339450:intron | 40.0% | |
! | TGTTCATGGCAATTTTGAGC+AGG | - | tig0003325:5324-5343 | Msa1339450:intron | 40.0% |
! | ATTTTGAGCAGGATCATGGT+TGG | - | tig0003325:5335-5354 | Msa1339450:intron | 40.0% |
GAGCTTTCAACTATGACAGA+AGG | - | tig0003325:5437-5456 | Msa1339450:intron | 40.0% | |
GATTATCACCACCAACAAGT+AGG | + | tig0003325:5519-5538 | None:intergenic | 40.0% | |
GGAACTAATACAACAGGAGA+AGG | - | tig0003325:5599-5618 | Msa1339450:CDS | 40.0% | |
TTCCATGTTTAATGGCCTGA+GGG | + | tig0003325:5808-5827 | None:intergenic | 40.0% | |
AAACATGGAAGACATGAGAG+AGG | - | tig0003325:5818-5837 | Msa1339450:CDS | 40.0% | |
CATGAGAGAGGCAAAGAATA+AGG | - | tig0003325:5830-5849 | Msa1339450:CDS | 40.0% | |
AGGCAAAGAATAAGGTGTGT+TGG | - | tig0003325:5838-5857 | Msa1339450:CDS | 40.0% | |
CTACAGCAATTGAAGTGAAC+AGG | + | tig0003325:5871-5890 | None:intergenic | 40.0% | |
!! | GAGTTAGGGCTTGTTTCTAT+TGG | - | tig0003325:5890-5909 | Msa1339450:intron | 40.0% |
AAAGGCCTTAGCAAGTGATT+TGG | - | tig0003325:6156-6175 | Msa1339450:intron | 40.0% | |
AAGGCCTTAGCAAGTGATTT+GGG | - | tig0003325:6157-6176 | Msa1339450:intron | 40.0% | |
! | TTCCTAGAGAAGCACAAGAT+AGG | + | tig0003325:6390-6409 | None:intergenic | 40.0% |
! | GCTTCTCTAGGAATACACTT+AGG | - | tig0003325:6397-6416 | Msa1339450:intron | 40.0% |
!! | AGATAGCAATGGATTGAGAC+AGG | + | tig0003325:6479-6498 | None:intergenic | 40.0% |
GATGCATGTGTAAATACAGG+TGG | - | tig0003325:6678-6697 | Msa1339450:CDS | 40.0% | |
! | ATCAACAATGACCAGGTTGA+AGG | - | tig0003325:6723-6742 | Msa1339450:CDS | 40.0% |
ATCATTCCATTCCTTCAACC+TGG | + | tig0003325:6737-6756 | None:intergenic | 40.0% | |
AGGAGGTTCAAAGAAGAAAG+AGG | - | tig0003325:6768-6787 | Msa1339450:CDS | 40.0% | |
GATGAGGTTACACATTCCTT+GGG | + | tig0003325:6959-6978 | None:intergenic | 40.0% | |
TGATGAGGTTACACATTCCT+TGG | + | tig0003325:6960-6979 | None:intergenic | 40.0% | |
AATTGGTGGAAAGGAGACGA+AGG | + | tig0003325:672-691 | None:intergenic | 45.0% | |
! | GTTGGGATTGGATTAGGTGT+AGG | - | tig0003325:861-880 | Msa1339450:three_prime_UTR | 45.0% |
TAGGTGTAGGAGTAGGAACA+TGG | - | tig0003325:874-893 | Msa1339450:three_prime_UTR | 45.0% | |
AGGTGTAGGAGTAGGAACAT+GGG | - | tig0003325:875-894 | Msa1339450:three_prime_UTR | 45.0% | |
! | TAAGCTGAAACCGCGCTTTT+CGG | - | tig0003325:1210-1229 | Msa1339450:intron | 45.0% |
TATCCAAACAGGCCCTTAGT+TGG | - | tig0003325:1579-1598 | Msa1339450:intron | 45.0% | |
ACACCAAGCATGCCAACTAA+GGG | + | tig0003325:1594-1613 | None:intergenic | 45.0% | |
AACACCAAGCATGCCAACTA+AGG | + | tig0003325:1595-1614 | None:intergenic | 45.0% | |
AGCAAAATAGCCCGTCTTAC+TGG | + | tig0003325:1939-1958 | None:intergenic | 45.0% | |
! | ATTTTGCTCTCTGGACATGC+AGG | - | tig0003325:1951-1970 | Msa1339450:CDS | 45.0% |
! | GTTTTCACTTCGACAGATGC+AGG | - | tig0003325:2221-2240 | Msa1339450:intron | 45.0% |
CGACAGATGCAGGGAAAATA+CGG | - | tig0003325:2231-2250 | Msa1339450:CDS | 45.0% | |
AGGGAAAATACGGATGTCCT+AGG | - | tig0003325:2241-2260 | Msa1339450:CDS | 45.0% | |
!! | CTTTTGAAGGGAGGATTGAC+AGG | + | tig0003325:2565-2584 | None:intergenic | 45.0% |
CTGTCAATCCTCCCTTCAAA+AGG | - | tig0003325:2563-2582 | Msa1339450:intron | 45.0% | |
! | CTCTAATCGCGCCTTTTGAA+GGG | + | tig0003325:2577-2596 | None:intergenic | 45.0% |
TAGCAGCTTGTGGACTTTGA+AGG | + | tig0003325:3072-3091 | None:intergenic | 45.0% | |
AGGTCTTTCTTGGATCACCA+AGG | - | tig0003325:3321-3340 | Msa1339450:CDS | 45.0% | |
GGTGTGATCTCGATGTTGTA+AGG | + | tig0003325:3470-3489 | None:intergenic | 45.0% | |
TTGAGACGAGTCTCATCTTG+AGG | + | tig0003325:3494-3513 | None:intergenic | 45.0% | |
TGCAAGCACTTCAGCAATGT+GGG | + | tig0003325:3576-3595 | None:intergenic | 45.0% | |
ACTCAGTAATCAGACCGAAG+AGG | - | tig0003325:3652-3671 | Msa1339450:intron | 45.0% | |
TAATCAGACCGAAGAGGTTG+TGG | - | tig0003325:3658-3677 | Msa1339450:intron | 45.0% | |
TTCCGAAGACCTTTACCTCT+TGG | + | tig0003325:3756-3775 | None:intergenic | 45.0% | |
!! | CATTCCTCAAAGGCATTGTC+AGG | + | tig0003325:4274-4293 | None:intergenic | 45.0% |
CCATCGCCTTTGAATAGATC+TGG | + | tig0003325:4412-4431 | None:intergenic | 45.0% | |
CCAGATCTATTCAAAGGCGA+TGG | - | tig0003325:4409-4428 | Msa1339450:CDS | 45.0% | |
!!! | GTATTGCTTTTTGGACCTCC+TGG | - | tig0003325:4454-4473 | Msa1339450:intron | 45.0% |
ATTGTCTTTCCTGTACCAGG+AGG | + | tig0003325:4472-4491 | None:intergenic | 45.0% | |
AGCATTGTCTTTCCTGTACC+AGG | + | tig0003325:4475-4494 | None:intergenic | 45.0% | |
!! | CACATTGAAGTGATGGTGGA+CGG | + | tig0003325:4547-4566 | None:intergenic | 45.0% |
ACCATCACTTCAATGTGGCA+CGG | - | tig0003325:4550-4569 | Msa1339450:intron | 45.0% | |
TGAGCACAACTCAACGAGAA+GGG | - | tig0003325:4684-4703 | Msa1339450:intron | 45.0% | |
TTGACAATAGTCCCTCCCAA+CGG | + | tig0003325:4729-4748 | None:intergenic | 45.0% | |
TTATAAGACGGTTTCAGCGC+AGG | - | tig0003325:4812-4831 | Msa1339450:intron | 45.0% | |
GATTTGGACCCTGAAACTTC+TGG | + | tig0003325:5128-5147 | None:intergenic | 45.0% | |
! | GGCAATTTTGAGCAGGATCA+TGG | - | tig0003325:5331-5350 | Msa1339450:intron | 45.0% |
TCTTCCGTCTGCAGAAAACA+GGG | - | tig0003325:5358-5377 | Msa1339450:intron | 45.0% | |
! | GTTTCCCTGTTTTCTGCAGA+CGG | + | tig0003325:5365-5384 | None:intergenic | 45.0% |
! | TCTAGTTCCCTACTTGTTGG+TGG | - | tig0003325:5508-5527 | Msa1339450:intron | 45.0% |
AAGATCAAGTGATTCCCCTC+AGG | - | tig0003325:5790-5809 | Msa1339450:CDS | 45.0% | |
TCCATGTTTAATGGCCTGAG+GGG | + | tig0003325:5807-5826 | None:intergenic | 45.0% | |
CTTCCATGTTTAATGGCCTG+AGG | + | tig0003325:5809-5828 | None:intergenic | 45.0% | |
! | CACTTGCTAAGGCCTTTGTA+TGG | + | tig0003325:6153-6172 | None:intergenic | 45.0% |
! | GTGACTCGGGAATAGATATG+TGG | - | tig0003325:6255-6274 | Msa1339450:intron | 45.0% |
GTCCTATCTTGTGCTTCTCT+AGG | - | tig0003325:6385-6404 | Msa1339450:intron | 45.0% | |
TACACTTAGGGCCTGTTTGA+TGG | - | tig0003325:6410-6429 | Msa1339450:intron | 45.0% | |
CAGAAGGATCAACAATGACC+AGG | - | tig0003325:6716-6735 | Msa1339450:CDS | 45.0% | |
! | CAATGACCAGGTTGAAGGAA+TGG | - | tig0003325:6728-6747 | Msa1339450:CDS | 45.0% |
ACCTCATCATGCACCATGTT+TGG | - | tig0003325:6971-6990 | Msa1339450:five_prime_UTR | 45.0% | |
CCTCATCATGCACCATGTTT+GGG | - | tig0003325:6972-6991 | Msa1339450:five_prime_UTR | 45.0% | |
ACTCAAGACTCTCCCAAACA+TGG | + | tig0003325:6987-7006 | None:intergenic | 45.0% | |
!! | GCAGCATTAGGTGTTGGGAT+TGG | - | tig0003325:849-868 | Msa1339450:three_prime_UTR | 50.0% |
GTAGGAGTAGGAACATGGGT+CGG | - | tig0003325:879-898 | Msa1339450:three_prime_UTR | 50.0% | |
ATGCCAACTAAGGGCCTGTT+TGG | + | tig0003325:1585-1604 | None:intergenic | 50.0% | |
ACGACTTATCCAAGCACACC+AGG | - | tig0003325:1904-1923 | Msa1339450:CDS | 50.0% | |
TCTTACTGGCGAAAGGTTCC+TGG | + | tig0003325:1925-1944 | None:intergenic | 50.0% | |
GGAACCTTTCGCCAGTAAGA+CGG | - | tig0003325:1925-1944 | Msa1339450:CDS | 50.0% | |
GAACCTTTCGCCAGTAAGAC+GGG | - | tig0003325:1926-1945 | Msa1339450:CDS | 50.0% | |
!!! | AGACGGGCTATTTTGCTCTC+TGG | - | tig0003325:1942-1961 | Msa1339450:CDS | 50.0% |
!! | TAATCGCGCCTTTTGAAGGG+AGG | + | tig0003325:2574-2593 | None:intergenic | 50.0% |
! | CCTCTAATCGCGCCTTTTGA+AGG | + | tig0003325:2578-2597 | None:intergenic | 50.0% |
! | CCTTCAAAAGGCGCGATTAG+AGG | - | tig0003325:2575-2594 | Msa1339450:intron | 50.0% |
!! | GGCGCGATTAGAGGTACTAA+AGG | - | tig0003325:2584-2603 | Msa1339450:intron | 50.0% |
!! | CAGTGTTGATACTCGGTTCC+CGG | - | tig0003325:3387-3406 | Msa1339450:CDS | 50.0% |
AGACGAGTCTCATCTTGAGG+TGG | + | tig0003325:3491-3510 | None:intergenic | 50.0% | |
AAGCACTTCAGCAATGTGGG+TGG | + | tig0003325:3573-3592 | None:intergenic | 50.0% | |
CTGCAAGCACTTCAGCAATG+TGG | + | tig0003325:3577-3596 | None:intergenic | 50.0% | |
GGCCAAGAGGTAAAGGTCTT+CGG | - | tig0003325:3751-3770 | Msa1339450:intron | 50.0% | |
CCTGGAACAGACTCAGTACA+TGG | + | tig0003325:3856-3875 | None:intergenic | 50.0% | |
CCATGTACTGAGTCTGTTCC+AGG | - | tig0003325:3853-3872 | Msa1339450:intron | 50.0% | |
TGTACTGAGTCTGTTCCAGG+AGG | - | tig0003325:3856-3875 | Msa1339450:intron | 50.0% | |
GTACTGAGTCTGTTCCAGGA+GGG | - | tig0003325:3857-3876 | Msa1339450:intron | 50.0% | |
GAGTCCTGACAATGCCTTTG+AGG | - | tig0003325:4267-4286 | Msa1339450:CDS | 50.0% | |
!! | GGGGTTCTGAAGCCATGTAA+AGG | - | tig0003325:4430-4449 | Msa1339450:CDS | 50.0% |
! | CTTTTTGGACCTCCTGGTAC+AGG | - | tig0003325:4460-4479 | Msa1339450:intron | 50.0% |
CGTCCACCATCACTTCAATG+TGG | - | tig0003325:4545-4564 | Msa1339450:intron | 50.0% | |
GTGCCACATTGAAGTGATGG+TGG | + | tig0003325:4551-4570 | None:intergenic | 50.0% | |
TCCGTGCCACATTGAAGTGA+TGG | + | tig0003325:4554-4573 | None:intergenic | 50.0% | |
! | TTGATAGCATGCTTGGGCAG+AGG | - | tig0003325:4650-4669 | Msa1339450:intron | 50.0% |
GTGAGCACAACTCAACGAGA+AGG | - | tig0003325:4683-4702 | Msa1339450:intron | 50.0% | |
TGAATTCATGTCCCGTTGGG+AGG | - | tig0003325:4714-4733 | Msa1339450:intron | 50.0% | |
GAATTCATGTCCCGTTGGGA+GGG | - | tig0003325:4715-4734 | Msa1339450:intron | 50.0% | |
TGACAATAGTCCCTCCCAAC+GGG | + | tig0003325:4728-4747 | None:intergenic | 50.0% | |
GTCTTCCGTCTGCAGAAAAC+AGG | - | tig0003325:5357-5376 | Msa1339450:intron | 50.0% | |
GATATGCTGCAGTCATGCAC+AGG | + | tig0003325:5569-5588 | None:intergenic | 50.0% | |
TCCCCTCAGGCCATTAAACA+TGG | - | tig0003325:5803-5822 | Msa1339450:CDS | 50.0% | |
! | GGCACCCAAATCACTTGCTA+AGG | + | tig0003325:6164-6183 | None:intergenic | 50.0% |
TTACCAGGCAGTACAAGGCA+AGG | + | tig0003325:6185-6204 | None:intergenic | 50.0% | |
! | GCTGCAAGTTTTGCTGCAGA+AGG | - | tig0003325:6700-6719 | Msa1339450:CDS | 50.0% |
CCCAAACATGGTGCATGATG+AGG | + | tig0003325:6975-6994 | None:intergenic | 50.0% | |
AGGCCCTTAGTTGGCATGCT+TGG | - | tig0003325:1588-1607 | Msa1339450:intron | 55.0% | |
CGAAAGGTTCCTGGTGTGCT+TGG | + | tig0003325:1916-1935 | None:intergenic | 55.0% | |
TAGCCCGTCTTACTGGCGAA+AGG | + | tig0003325:1932-1951 | None:intergenic | 55.0% | |
!! | GGTCCATCTTTGAGGCGACT+CGG | - | tig0003325:2513-2532 | Msa1339450:intron | 55.0% |
!! | GTCCATCTTTGAGGCGACTC+GGG | - | tig0003325:2514-2533 | Msa1339450:intron | 55.0% |
TGCAGAGGCCACAACCTCTT+CGG | + | tig0003325:3669-3688 | None:intergenic | 55.0% | |
! | TCTCGCTACTTTCACCCTCC+TGG | + | tig0003325:3874-3893 | None:intergenic | 55.0% |
GGAGGGTGAAAGTAGCGAGA+AGG | - | tig0003325:3874-3893 | Msa1339450:intron | 55.0% | |
TGCAGCATATCGCCCCCTTA+AGG | - | tig0003325:5578-5597 | Msa1339450:CDS | 55.0% | |
CTCCCGAGTCGCCTCAAAGA+TGG | + | tig0003325:2519-2538 | None:intergenic | 60.0% | |
! | GCGACTCGGGAGTTTGTGTC+TGG | - | tig0003325:2527-2546 | Msa1339450:intron | 60.0% |
GTGCCTTGCCTTGTACTGCC+TGG | - | tig0003325:6179-6198 | Msa1339450:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0003325 | gene | 602 | 7110 | 602 | ID=Msa1339450;Name=Msa1339450 |
tig0003325 | mRNA | 602 | 7110 | 602 | ID=Msa1339450-mRNA-1;Parent=Msa1339450;Name=Msa1339450-mRNA-1;_AED=0.10;_eAED=0.10;_QI=214|1|1|1|1|1|14|297|786 |
tig0003325 | exon | 602 | 1015 | 602 | ID=Msa1339450-mRNA-1:exon:2151;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 1861 | 1992 | 1861 | ID=Msa1339450-mRNA-1:exon:2150;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 2080 | 2148 | 2080 | ID=Msa1339450-mRNA-1:exon:2149;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 2231 | 2366 | 2231 | ID=Msa1339450-mRNA-1:exon:2148;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 2879 | 3444 | 2879 | ID=Msa1339450-mRNA-1:exon:2147;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 3578 | 3649 | 3578 | ID=Msa1339450-mRNA-1:exon:2146;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 3784 | 3865 | 3784 | ID=Msa1339450-mRNA-1:exon:2145;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 3953 | 4449 | 3953 | ID=Msa1339450-mRNA-1:exon:2144;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 4581 | 4645 | 4581 | ID=Msa1339450-mRNA-1:exon:2143;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 5116 | 5209 | 5116 | ID=Msa1339450-mRNA-1:exon:2142;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 5440 | 5475 | 5440 | ID=Msa1339450-mRNA-1:exon:2141;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 5559 | 5647 | 5559 | ID=Msa1339450-mRNA-1:exon:2140;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 5740 | 5861 | 5740 | ID=Msa1339450-mRNA-1:exon:2139;Parent=Msa1339450-mRNA-1 |
tig0003325 | exon | 6613 | 7110 | 6613 | ID=Msa1339450-mRNA-1:exon:2138;Parent=Msa1339450-mRNA-1 |
tig0003325 | five_prime_UTR | 6897 | 7110 | 6897 | ID=Msa1339450-mRNA-1:five_prime_utr;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 6613 | 6896 | 6613 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 5740 | 5861 | 5740 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 5559 | 5647 | 5559 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 5440 | 5475 | 5440 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 5116 | 5209 | 5116 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 4581 | 4645 | 4581 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 3953 | 4449 | 3953 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 3784 | 3865 | 3784 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 3578 | 3649 | 3578 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 2879 | 3444 | 2879 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 2231 | 2366 | 2231 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 2080 | 2148 | 2080 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 1861 | 1992 | 1861 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | CDS | 899 | 1015 | 899 | ID=Msa1339450-mRNA-1:cds;Parent=Msa1339450-mRNA-1 |
tig0003325 | three_prime_UTR | 602 | 898 | 602 | ID=Msa1339450-mRNA-1:three_prime_utr;Parent=Msa1339450-mRNA-1 |
Gene Sequence |
Protein sequence |