AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1295510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295510 MtrunA17_Chr8g0373031 97.368 760 20 0 1 760 1 760 0.0 1513
Msa1295510 MtrunA17_Chr5g0404311 56.234 770 324 6 1 760 1 767 0.0 838
Msa1295510 MtrunA17_Chr8g0377151 31.557 713 443 11 19 708 19 709 4.54e-99 323
Msa1295510 MtrunA17_Chr3g0122721 32.123 716 436 14 19 709 18 708 6.16e-96 315
Msa1295510 MtrunA17_Chr1g0155261 44.019 209 115 1 19 227 16 222 2.17e-42 154
Msa1295510 MtrunA17_Chr7g0248251 28.457 376 205 12 16 369 44 377 2.98e-29 124
Msa1295510 MtrunA17_Chr4g0031431 24.261 643 380 23 20 611 26 612 3.04e-26 114
Msa1295510 MtrunA17_Chr4g0044411 54.667 75 34 0 276 350 274 348 6.92e-25 110
Msa1295510 MtrunA17_Chr2g0284461 28.041 296 175 10 65 352 104 369 8.57e-24 107
Msa1295510 MtrunA17_Chr1g0199321 53.333 75 35 0 276 350 248 322 9.78e-23 103
Msa1295510 MtrunA17_Chr7g0275081 43.529 85 48 0 274 358 77 161 2.43e-22 100
Msa1295510 MtrunA17_Chr5g0437411 26.946 334 198 12 38 349 58 367 2.79e-22 102
Msa1295510 MtrunA17_Chr3g0106931 47.500 80 42 0 273 352 231 310 2.38e-21 99.8
Msa1295510 MtrunA17_Chr7g0261371 48.718 78 40 0 273 350 239 316 3.14e-21 99.4
Msa1295510 MtrunA17_Chr7g0261371 30.636 173 116 3 538 708 617 787 1.25e-13 74.7
Msa1295510 MtrunA17_Chr4g0013091 21.474 475 283 11 254 708 293 697 2.13e-20 96.3
Msa1295510 MtrunA17_Chr3g0117851 47.561 82 43 0 268 349 268 349 4.14e-20 95.1
Msa1295510 MtrunA17_Chr1g0183781 50.000 70 35 0 273 342 239 308 1.06e-19 94.4
Msa1295510 MtrunA17_Chr1g0183781 30.058 173 119 2 538 709 543 714 2.76e-13 73.6
Msa1295510 MtrunA17_Chr7g0234671 42.391 92 53 0 273 364 76 167 1.28e-19 92.8
Msa1295510 MtrunA17_Chr7g0237931 53.333 75 35 0 276 350 238 312 2.59e-19 92.8
Msa1295510 MtrunA17_Chr5g0413681 44.211 95 52 1 266 359 270 364 5.37e-19 92.0
Msa1295510 MtrunA17_Chr4g0059201 42.708 96 53 1 266 359 308 403 1.07e-18 90.9
Msa1295510 MtrunA17_Chr1g0189811 36.082 97 62 0 276 372 64 160 3.18e-18 88.2
Msa1295510 MtrunA17_Chr1g0198984 50.794 63 31 0 288 350 1 63 5.59e-18 80.5
Msa1295510 MtrunA17_Chr7g0275961 23.235 340 216 7 27 361 41 340 3.30e-17 86.7
Msa1295510 MtrunA17_Chr4g0044631 40.698 86 47 1 276 357 15 100 1.70e-16 82.4
Msa1295510 MtrunA17_Chr5g0420471 40.698 86 47 2 271 352 21 106 1.71e-15 79.7
Msa1295510 MtrunA17_Chr4g0048811 50.746 67 32 1 276 341 6 72 2.01e-15 78.2
Msa1295510 MtrunA17_Chr5g0434171 43.056 72 41 0 271 342 31 102 2.07e-15 79.3
Msa1295510 MtrunA17_Chr3g0110121 37.624 101 57 2 258 352 17 117 2.57e-15 79.3
Msa1295510 MtrunA17_Chr6g0479261 40.698 86 47 2 271 352 21 106 3.22e-15 79.0
Msa1295510 MtrunA17_Chr8g0346441 24.308 325 196 8 28 341 40 325 6.22e-15 79.3
Msa1295510 MtrunA17_Chr5g0435041 27.869 183 127 2 536 713 120 302 9.66e-15 76.6
Msa1295510 MtrunA17_Chr1g0177261 43.478 92 40 4 271 352 5 94 8.46e-14 74.3
Msa1295510 MtrunA17_Chr8g0390311 31.111 135 77 3 242 371 373 496 1.22e-13 75.1
Msa1295510 MtrunA17_Chr2g0280671 47.692 65 34 0 277 341 17 81 2.06e-13 72.8
Msa1295510 MtrunA17_Chr1g0177281 43.478 92 40 4 271 352 5 94 2.53e-13 72.8
Msa1295510 MtrunA17_Chr1g0177271 45.679 81 36 3 271 345 5 83 3.00e-13 72.8
Msa1295510 MtrunA17_Chr7g0267501 22.881 472 276 17 273 720 6 413 3.60e-13 72.4
Msa1295510 MtrunA17_Chr5g0400971 48.485 66 34 0 276 341 68 133 3.72e-13 72.4
Msa1295510 MtrunA17_Chr3g0129811 35.955 89 50 1 260 341 61 149 6.69e-13 72.0
Msa1295510 MtrunA17_Chr1g0177301 44.578 83 40 3 276 352 7 89 2.15e-12 69.7
Msa1295510 MtrunA17_Chr3g0111451 25.904 166 118 2 549 709 154 319 4.28e-12 68.9
Msa1295510 MtrunA17_Chr1g0152291 46.970 66 35 0 276 341 46 111 9.38e-12 67.8
Msa1295510 MtrunA17_Chr2g0322021 42.353 85 41 3 276 352 7 91 1.33e-11 67.4
Msa1295510 MtrunA17_Chr8g0384041 33.654 104 67 1 273 374 8 111 1.51e-11 67.4
Msa1295510 MtrunA17_Chr1g0196911 40.278 72 42 1 275 345 506 577 1.81e-11 68.2
Msa1295510 MtrunA17_Chr2g0290151 27.381 168 119 2 549 714 289 455 2.34e-11 67.0
Msa1295510 MtrunA17_Chr3g0144071 32.609 92 57 1 277 363 32 123 5.55e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1295510 AT4G36550.1 38.873 710 365 13 15 713 10 661 2.14e-139 427
Msa1295510 AT1G67530.2 31.551 748 452 18 19 739 17 731 1.36e-98 323
Msa1295510 AT1G67530.1 31.551 748 452 18 19 739 17 731 1.36e-98 323
Msa1295510 AT1G67530.4 31.551 748 452 18 19 739 17 731 1.36e-98 323
Msa1295510 AT1G24330.1 32.153 706 448 15 19 709 17 706 1.77e-97 319
Msa1295510 AT1G24330.2 32.153 706 448 15 19 709 17 706 1.77e-97 319
Msa1295510 AT1G67530.3 34.783 506 288 12 19 506 17 498 1.42e-83 276
Msa1295510 AT1G27910.1 28.947 722 480 11 4 710 2 705 1.58e-79 271
Msa1295510 AT5G67340.1 24.733 469 305 10 276 708 241 697 2.44e-35 143
Msa1295510 AT5G67340.2 24.733 469 305 10 276 708 241 697 2.44e-35 143
Msa1295510 AT3G46510.1 25.246 610 361 20 22 587 30 588 5.16e-32 133
Msa1295510 AT5G42340.1 31.724 290 152 9 66 350 117 365 2.40e-31 130
Msa1295510 AT1G71020.2 25.968 439 256 10 276 708 96 471 8.11e-28 118
Msa1295510 AT1G71020.1 25.968 439 256 10 276 708 244 619 3.93e-27 117
Msa1295510 AT3G54850.1 24.601 439 267 10 276 712 249 625 2.12e-26 115
Msa1295510 AT3G07360.1 56.000 75 33 0 273 347 72 146 1.61e-24 108
Msa1295510 AT1G23030.1 50.667 75 37 0 276 350 242 316 5.12e-23 104
Msa1295510 AT2G23140.3 43.333 90 51 0 265 354 31 120 8.75e-23 104
Msa1295510 AT2G23140.3 25.714 175 122 3 536 709 461 628 1.18e-11 68.6
Msa1295510 AT2G23140.5 43.333 90 51 0 265 354 31 120 8.75e-23 104
Msa1295510 AT2G23140.5 25.714 175 122 3 536 709 461 628 1.18e-11 68.6
Msa1295510 AT2G23140.1 43.333 90 51 0 265 354 223 312 1.15e-22 104
Msa1295510 AT2G23140.1 26.519 181 131 2 530 709 641 820 2.33e-11 67.8
Msa1295510 AT2G23140.2 43.333 90 51 0 265 354 220 309 1.17e-22 104
Msa1295510 AT2G23140.2 26.519 181 131 2 530 709 638 817 2.23e-11 68.2
Msa1295510 AT2G23140.4 43.333 90 51 0 265 354 220 309 1.17e-22 104
Msa1295510 AT2G23140.4 26.519 181 131 2 530 709 638 817 2.23e-11 68.2
Msa1295510 AT2G28830.1 52.632 76 36 0 275 350 184 259 4.50e-22 101
Msa1295510 AT1G29340.1 24.520 469 280 11 273 727 303 711 1.94e-21 100
Msa1295510 AT1G10560.1 41.905 105 60 1 252 355 264 368 6.34e-20 95.1
Msa1295510 AT1G49780.1 35.256 156 78 4 276 427 15 151 8.38e-19 90.1
Msa1295510 AT5G01830.1 50.667 75 35 1 276 350 275 347 3.70e-17 86.3
Msa1295510 AT3G54790.2 38.272 81 50 0 273 353 200 280 3.92e-17 86.3
Msa1295510 AT3G54790.3 38.272 81 50 0 273 353 236 316 5.73e-17 85.9
Msa1295510 AT3G54790.1 38.272 81 50 0 273 353 236 316 5.73e-17 85.9
Msa1295510 AT3G19380.1 37.838 111 59 4 276 381 15 120 1.22e-15 80.5
Msa1295510 AT1G66160.1 45.333 75 41 0 268 342 26 100 2.15e-15 79.7
Msa1295510 AT1G60190.1 38.889 90 55 0 270 359 273 362 9.70e-15 78.6
Msa1295510 AT5G18340.1 39.080 87 52 1 266 352 65 150 1.77e-14 77.0
Msa1295510 AT3G61390.4 41.096 73 43 0 275 347 278 350 4.26e-14 75.1
Msa1295510 AT5G18320.1 39.326 89 53 1 265 353 62 149 8.09e-14 75.1
Msa1295510 AT3G61390.2 41.096 73 43 0 275 347 353 425 9.69e-14 74.7
Msa1295510 AT4G21350.1 38.679 106 60 2 276 378 6 109 1.24e-13 73.9
Msa1295510 AT3G49810.1 46.970 66 35 0 276 341 65 130 1.34e-13 74.3
Msa1295510 AT5G09800.1 40.260 77 46 0 265 341 1 77 3.02e-13 72.8
Msa1295510 AT5G37490.1 43.284 67 38 0 276 342 32 98 4.44e-13 72.4
Msa1295510 AT5G18330.1 34.783 92 59 1 268 359 58 148 1.13e-12 71.2
Msa1295510 AT3G52450.1 41.463 82 43 2 276 352 8 89 3.38e-12 69.7
Msa1295510 AT5G65920.1 46.970 66 35 0 276 341 61 126 3.79e-12 69.7
Msa1295510 AT5G65920.2 46.970 66 35 0 276 341 61 126 3.79e-12 69.7
Msa1295510 AT2G35930.1 41.463 82 43 2 276 352 13 94 6.40e-12 68.9
Msa1295510 AT3G18710.1 42.029 69 40 0 273 341 10 78 8.42e-12 68.6
Msa1295510 AT3G03440.1 26.776 183 128 2 536 712 167 349 2.74e-11 66.6
Msa1295510 AT1G01660.1 40.845 71 42 0 275 345 497 567 2.86e-11 67.4
Msa1295510 AT1G01660.2 40.845 71 42 0 275 345 498 568 2.89e-11 67.4
Msa1295510 AT3G11840.1 37.963 108 60 4 276 378 11 116 3.19e-11 67.0

Find 194 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTCCTAACGTTGCTTTAA+AGG 0.124667 8_3:-53672084 Msa1295510:CDS
AGGCAAAAGTTGAATCTTTA+TGG 0.178342 8_3:+53675261 None:intergenic
ATGCGTGCCCGATATCTTTA+AGG 0.190954 8_3:-53672232 Msa1295510:CDS
ATATACAATTGTTGCTTCTA+TGG 0.199949 8_3:+53675010 None:intergenic
CTAATGACTTTCTTGCCTTT+TGG 0.227136 8_3:+53673235 None:intergenic
ACTGGGCTCTCCTTATTATA+AGG 0.232353 8_3:-53670067 Msa1295510:three_prime_UTR
ACGAGGTCATTATTGAATTT+AGG 0.253330 8_3:+53675212 None:intergenic
AGTTGTCTGCTGGGTAATTT+TGG 0.256943 8_3:-53669906 Msa1295510:three_prime_UTR
GTGCTCAGAAATCTCATAAC+TGG 0.287881 8_3:+53671636 None:intergenic
TACATCAACCTTAAAGATAT+CGG 0.292726 8_3:+53672224 None:intergenic
AGCTGCAATGTTCGCTTTAT+CGG 0.305764 8_3:+53670709 None:intergenic
GATCCTGTTGTCATTGCTTC+AGG 0.312409 8_3:-53672200 Msa1295510:CDS
ACTAACCCATGAAAAGTAAA+AGG 0.312904 8_3:+53675241 None:intergenic
CCGGAATGTCCCTTATAATA+AGG 0.319288 8_3:+53670057 None:intergenic
TTGTATCTTCTGATAAAGTA+TGG 0.319394 8_3:-53672437 Msa1295510:CDS
GGAATATTGTGAGTTGGTTA+TGG 0.320822 8_3:-53670342 Msa1295510:CDS
CTCGAATAGTTGATGATCTT+AGG 0.321799 8_3:-53672712 Msa1295510:CDS
GTCACTTCCATTAGGAGTTT+CGG 0.334044 8_3:-53671972 Msa1295510:CDS
ATGTCTTCCGCTTGCCTACT+TGG 0.335422 8_3:+53672014 None:intergenic
TGGAGAAGCTCTTGCTATAC+TGG 0.337972 8_3:-53670753 Msa1295510:CDS
TCTTGAGAGAAGGGGAGAAA+AGG 0.344358 8_3:+53669778 None:intergenic
CTTGAGAGAAGGGGAGAAAA+GGG 0.355133 8_3:+53669779 None:intergenic
GATCTTAGTAACGTATCATT+TGG 0.355512 8_3:-53671918 Msa1295510:CDS
AGTCATATATACAATAATAA+TGG 0.356246 8_3:+53669659 None:intergenic
TTCTTTCATAAGTTGTCTGC+TGG 0.357222 8_3:-53669916 Msa1295510:three_prime_UTR
CCTTATTATAAGGGACATTC+CGG 0.366375 8_3:-53670057 Msa1295510:three_prime_UTR
ACAAAATGAGGAAACCAAAA+AGG 0.369276 8_3:-53672477 Msa1295510:CDS
TCCGCTTGCCTACTTGGATT+AGG 0.370084 8_3:+53672020 None:intergenic
TACTATTTGTGATTGGATAT+AGG 0.375920 8_3:-53669996 Msa1295510:three_prime_UTR
TGTTCGTACATCGTGTCTCT+CGG 0.378527 8_3:-53670581 Msa1295510:CDS
GAGACATTTCAACGCGAGTT+TGG 0.383180 8_3:+53675103 None:intergenic
ACCTCTGCAGCCAACATAAC+AGG 0.385430 8_3:+53673180 None:intergenic
TGGCACGTTCAAACCATTCA+TGG 0.385839 8_3:+53671944 None:intergenic
TCTGTCTTACTATTTGTGAT+TGG 0.386099 8_3:-53670003 Msa1295510:three_prime_UTR
TCTTGTGTTGTTGAAATACT+TGG 0.390441 8_3:-53670431 Msa1295510:CDS
GCAGATACATGGCTCATATC+TGG 0.392572 8_3:-53671784 Msa1295510:CDS
TAGCTTTCCGTTGGTACTCT+TGG 0.398942 8_3:+53670642 None:intergenic
GTACGAACAAAATTCAGAAT+TGG 0.402152 8_3:+53670595 None:intergenic
CTGAACTTCATGAGCGTCAA+TGG 0.402913 8_3:-53671752 Msa1295510:CDS
CTGTGGTTGAAGGACCTTGT+TGG 0.404357 8_3:+53672627 None:intergenic
TATTCAAACCACGATCAGTA+TGG 0.404935 8_3:-53672299 Msa1295510:CDS
TTTGGCTTTATCAATTGTAC+TGG 0.407230 8_3:+53673539 None:intergenic
GTTGTCTTGTCTCCCTCTAC+TGG 0.408265 8_3:-53675466 Msa1295510:five_prime_UTR
CAGGAACTATATCTTGAATC+TGG 0.418920 8_3:+53673199 None:intergenic
GGTATCTGTTGTTGAAACTA+AGG 0.420516 8_3:-53670462 Msa1295510:CDS
ACTCAAGAAATTAGTTGATA+AGG 0.422625 8_3:-53673637 Msa1295510:CDS
GGAACTTCCGAAACTCCTAA+TGG 0.424040 8_3:+53671965 None:intergenic
TCAAAATTGAGCTACATAGA+AGG 0.424580 8_3:-53675082 Msa1295510:five_prime_UTR
CTGGAATTCTCATTCGCTAC+AGG 0.425052 8_3:+53672362 None:intergenic
AAGCTTCAGTCACTTCCATT+AGG 0.425975 8_3:-53671980 Msa1295510:CDS
TCCTGTTATGTTGGCTGCAG+AGG 0.427320 8_3:-53673181 Msa1295510:intron
GTGGTTAGTGCCATGTGATT+TGG 0.428473 8_3:-53669738 Msa1295510:three_prime_UTR
ACCAAGTCGATGAAAGTAGA+AGG 0.433766 8_3:+53675427 None:intergenic
CTGGGCTCTCCTTATTATAA+GGG 0.436130 8_3:-53670066 Msa1295510:three_prime_UTR
TAGGCGTGTCACCTTTGTCC+TGG 0.437720 8_3:-53672693 Msa1295510:CDS
CCCTTCTTATTTGCAGCAAA+CGG 0.441031 8_3:-53673985 Msa1295510:five_prime_UTR
GCACGTCCTCGGTCCTCATC+AGG 0.442215 8_3:-53673585 Msa1295510:CDS
TCCTTCTACTTTCATCGACT+TGG 0.445145 8_3:-53675428 Msa1295510:five_prime_UTR
CAACTATCAGTTCCCATTCA+AGG 0.445198 8_3:+53673957 None:intergenic
AATTCCTTTAAAGCAACGTT+AGG 0.445693 8_3:+53672080 None:intergenic
TTGTGAGTTGGTTATGGAGG+AGG 0.447420 8_3:-53670336 Msa1295510:CDS
TGATTCTAGTGTACTTTACC+TGG 0.447489 8_3:-53673496 Msa1295510:intron
GAATCGTTATCTGTGGTTGA+AGG 0.448926 8_3:+53672617 None:intergenic
AATTAGTTGATAAGGTGTTA+AGG 0.454721 8_3:-53673629 Msa1295510:CDS
TACTGATCGTGGTTTGAATA+CGG 0.455932 8_3:+53672302 None:intergenic
CTCATCAGGAATACCTGCTC+TGG 0.456029 8_3:-53673571 Msa1295510:CDS
CTCCTCGAGACTGAAGCAAT+TGG 0.457279 8_3:-53670773 Msa1295510:CDS
ACTTTATCAAAACTGTGAAA+TGG 0.457551 8_3:+53675059 None:intergenic
CTCTATTACGATGCTTGTTG+CGG 0.461170 8_3:+53672535 None:intergenic
GTTCGTACATCGTGTCTCTC+GGG 0.461191 8_3:-53670580 Msa1295510:CDS
GAGAAACATACGAGCGGATG+TGG 0.466633 8_3:-53672178 Msa1295510:CDS
GACATACCAAAGCCAAGAAA+AGG 0.466687 8_3:-53669817 Msa1295510:three_prime_UTR
ATAGTTGTAGAAATAGCCTT+AGG 0.469360 8_3:-53669703 Msa1295510:three_prime_UTR
TTGAACAAGCTATCACGGTT+CGG 0.472915 8_3:-53670128 Msa1295510:CDS
AAGGATCTTTCCGCAGATAG+AGG 0.475682 8_3:-53673610 Msa1295510:CDS
GCAAACGGTACTCCCTTGAA+TGG 0.483761 8_3:-53673970 Msa1295510:exon
CATCTTGATTCTTGAGAGAA+GGG 0.485785 8_3:+53669769 None:intergenic
AGCGGATGTGGATACAGAAA+TGG 0.486743 8_3:-53672166 Msa1295510:CDS
GATTCTGCTGAAGAAGAGGC+TGG 0.489454 8_3:-53672671 Msa1295510:CDS
CCTCTTCTTCAGCAGAATCC+AGG 0.490625 8_3:+53672675 None:intergenic
ACTGGGTCAATGAAATTATC+CGG 0.490721 8_3:+53671654 None:intergenic
TCTTTCATAAGTTGTCTGCT+GGG 0.492761 8_3:-53669915 Msa1295510:three_prime_UTR
TGTAGAAATAGCCTTAGGTT+AGG 0.493202 8_3:-53669698 Msa1295510:three_prime_UTR
AGTTTCGGAAGTTCCATGAA+TGG 0.498066 8_3:-53671957 Msa1295510:CDS
CTTCAATTATTAAGATTCCT+CGG 0.499067 8_3:-53675171 Msa1295510:five_prime_UTR
CATGTTTGCATCCACCAATC+CGG 0.499817 8_3:+53670038 None:intergenic
TCTCCTGAAGCAATGACAAC+AGG 0.500963 8_3:+53672197 None:intergenic
ACCGTTTGCTGCAAATAAGA+AGG 0.502207 8_3:+53673984 None:intergenic
CAATCTCGTTCGCAGATACA+TGG 0.507317 8_3:-53671795 Msa1295510:CDS
GCATCTTGATTCTTGAGAGA+AGG 0.507503 8_3:+53669768 None:intergenic
TGTGAGTTGGTTATGGAGGA+GGG 0.511162 8_3:-53670335 Msa1295510:CDS
TAAAATAGAAGTCAGTGCAT+TGG 0.511298 8_3:+53670685 None:intergenic
AGATATAGTTCCTGTTATGT+TGG 0.513839 8_3:-53673190 Msa1295510:CDS
CAAAGCCAAGAAAAGGTAGT+TGG 0.514660 8_3:-53669810 Msa1295510:three_prime_UTR
ACATCAACCTTAAAGATATC+GGG 0.515169 8_3:+53672225 None:intergenic
TAAGGGACATTCCGGATTGG+TGG 0.517348 8_3:-53670049 Msa1295510:three_prime_UTR
AACCTTTGTGATACTAAAGA+TGG 0.518515 8_3:-53670488 Msa1295510:CDS
GTCCAGCACAGACGAAGAAA+AGG 0.519383 8_3:-53670408 Msa1295510:CDS
TGACACAGAGTTAAAAGCTT+CGG 0.520624 8_3:+53671677 None:intergenic
TGTGCTATCGTTTCCCACAT+TGG 0.520844 8_3:+53670286 None:intergenic
TTATTCTAATAGCTTTCCGT+TGG 0.521822 8_3:+53670633 None:intergenic
AAGCGGAAGACATTCGCTCA+TGG 0.523309 8_3:-53672004 Msa1295510:CDS
CTTGTGTTGTTGAAATACTT+GGG 0.526118 8_3:-53670430 Msa1295510:CDS
TGAACTTCATGAGCGTCAAT+GGG 0.527489 8_3:-53671751 Msa1295510:CDS
AACTATCAGTTCCCATTCAA+GGG 0.530458 8_3:+53673958 None:intergenic
TTCAGATTCCTCACTTGTGA+AGG 0.530676 8_3:-53671874 Msa1295510:CDS
AAAGTGCAAACTGAGTTTCA+AGG 0.532641 8_3:+53675332 None:intergenic
TGTTCGCTTTATCGGACCAA+TGG 0.532924 8_3:+53670717 None:intergenic
CCGTTTGCTGCAAATAAGAA+GGG 0.533805 8_3:+53673985 None:intergenic
TGCTGAAGAAGAGGCTGGGA+GGG 0.534243 8_3:-53672666 Msa1295510:CDS
TGGAAGAATTGTCGAACCAT+TGG 0.534883 8_3:-53670733 Msa1295510:CDS
GCATATACAGTCTCTTGAAA+GGG 0.537563 8_3:+53670520 None:intergenic
CTCCAATTGCTTCAGTCTCG+AGG 0.539976 8_3:+53670771 None:intergenic
GTATCTGTTGTTGAAACTAA+GGG 0.545498 8_3:-53670461 Msa1295510:CDS
AATTCTCTCAAAATGCCAAA+AGG 0.546324 8_3:-53673250 Msa1295510:CDS
ACTCTTGGTTACCAGAATCA+AGG 0.547034 8_3:+53670657 None:intergenic
AGCGGAAGACATTCGCTCAT+GGG 0.547386 8_3:-53672003 Msa1295510:CDS
AACCACAGATAACGATTCAA+AGG 0.549468 8_3:-53672612 Msa1295510:CDS
TTCCTTTGAATCGTTATCTG+TGG 0.550817 8_3:+53672610 None:intergenic
TGCATATACAGTCTCTTGAA+AGG 0.552297 8_3:+53670519 None:intergenic
CAAACGGTACTCCCTTGAAT+GGG 0.552762 8_3:-53673969 Msa1295510:exon
TTATAAGGGACATTCCGGAT+TGG 0.555465 8_3:-53670052 Msa1295510:three_prime_UTR
CTGGTTAGCAAAACCAGAGC+AGG 0.555767 8_3:+53673558 None:intergenic
TAGCACAAAGGTGTATGCAT+TGG 0.559035 8_3:-53670270 Msa1295510:CDS
CCTGGATTCTGCTGAAGAAG+AGG 0.559404 8_3:-53672675 Msa1295510:CDS
ACGCGTGGAATATTGTGAGT+TGG 0.563486 8_3:-53670348 Msa1295510:CDS
ATCGGGCACGCATATTCCTC+CGG 0.564872 8_3:+53672242 None:intergenic
TTGCCTACTTGGATTAGGAA+TGG 0.568827 8_3:+53672025 None:intergenic
GGGAACTGATAGTTGTAAAG+TGG 0.569339 8_3:-53673949 Msa1295510:CDS
CGAAGAAAAGGAATTTGCAC+TGG 0.569867 8_3:-53670396 Msa1295510:CDS
TTGGAGATATTGACAAGATA+CGG 0.570098 8_3:+53670305 None:intergenic
AGATAGAGGAAGCACGTCCT+CGG 0.570643 8_3:-53673596 Msa1295510:CDS
TTGTGATACTAAAGATGGTA+GGG 0.570925 8_3:-53670483 Msa1295510:CDS
TCAGCTCAGTGCCTAACCTA+AGG 0.571263 8_3:+53669687 None:intergenic
TTTGTGATACTAAAGATGGT+AGG 0.572011 8_3:-53670484 Msa1295510:CDS
GGTGCGTAAAGAATCATGAC+TGG 0.572498 8_3:+53672343 None:intergenic
GATACGTTACTAAGATCCAT+TGG 0.575411 8_3:+53671924 None:intergenic
GTGTGATGTTTGACCAGTAG+AGG 0.576369 8_3:+53675453 None:intergenic
AAACTGAGTTTCAAGGAAAG+TGG 0.576758 8_3:+53675339 None:intergenic
CTTGTCAATATCTCCAATGT+GGG 0.579898 8_3:-53670299 Msa1295510:CDS
GAATGGTTTGAACGTGCCAA+TGG 0.581417 8_3:-53671940 Msa1295510:CDS
TAGTAACGTATCATTTGGAT+CGG 0.581449 8_3:-53671913 Msa1295510:CDS
ATCTTGATTCTTGAGAGAAG+GGG 0.582080 8_3:+53669770 None:intergenic
TGCTCAGAAATCTCATAACT+GGG 0.582807 8_3:+53671637 None:intergenic
TTAAGGGATGTCGAGAGCGA+AGG 0.583689 8_3:-53670233 Msa1295510:CDS
TTTACTTACAGGCAATAACA+GGG 0.587895 8_3:-53673278 Msa1295510:intron
ATATTGTGAGTTGGTTATGG+AGG 0.594868 8_3:-53670339 Msa1295510:CDS
ATACAGAAATGGTTTGATGA+GGG 0.600102 8_3:-53672155 Msa1295510:CDS
ATTAAACACGGGAGAACAAG+AGG 0.601974 8_3:-53672408 Msa1295510:CDS
CACGAATTCCATACTGATCG+TGG 0.602310 8_3:+53672291 None:intergenic
TGGAATTTACAAAGTACTGC+AGG 0.602335 8_3:-53671560 Msa1295510:intron
AGGTGGATGTCAATTACTGT+TGG 0.604162 8_3:-53671580 Msa1295510:CDS
CAAGAATCAAGATGCTAGAG+AGG 0.604267 8_3:-53669760 Msa1295510:three_prime_UTR
CGGCTCAGAATTCACACTAT+CGG 0.607772 8_3:+53672322 None:intergenic
ATTCTGCTGAAGAAGAGGCT+GGG 0.610698 8_3:-53672670 Msa1295510:CDS
TACCATCTTTAGTATCACAA+AGG 0.613316 8_3:+53670486 None:intergenic
TGTGATGTTTGACCAGTAGA+GGG 0.616519 8_3:+53675454 None:intergenic
TAAAGGAATTAATATCAAAG+TGG 0.616973 8_3:-53672067 Msa1295510:CDS
TCCTAATCCAAGTAGGCAAG+CGG 0.617241 8_3:-53672021 Msa1295510:CDS
TCTTGTCAATATCTCCAATG+TGG 0.617512 8_3:-53670300 Msa1295510:CDS
CTGCTGAAGAAGAGGCTGGG+AGG 0.617545 8_3:-53672667 Msa1295510:CDS
TATGGAAACTTATTAAACAC+GGG 0.622844 8_3:-53672419 Msa1295510:CDS
TCTCCATTCCTAATCCAAGT+AGG 0.622989 8_3:-53672028 Msa1295510:CDS
TGAAGATACATGCAGTGTGT+TGG 0.623235 8_3:-53670801 Msa1295510:CDS
AGTTTGGTGAAGATTAAGCA+TGG 0.626758 8_3:+53675119 None:intergenic
CAGAGCAGGTATTCCTGATG+AGG 0.628667 8_3:+53673572 None:intergenic
ATGAGAGAATTGCTCCAACA+AGG 0.628878 8_3:-53672641 Msa1295510:CDS
AAGACTAGAAACAGTTCTCG+CGG 0.629393 8_3:-53671822 Msa1295510:CDS
TCTCGACATCCCTTAAAAGT+CGG 0.631819 8_3:+53670240 None:intergenic
GATTAGAGTCGCACCTCCGG+AGG 0.634468 8_3:-53672258 Msa1295510:CDS
CTGGTAACCAAGAGTACCAA+CGG 0.635015 8_3:-53670649 Msa1295510:CDS
GATACAGAAATGGTTTGATG+AGG 0.635279 8_3:-53672156 Msa1295510:CDS
GACACAAAAGCTCTGCGAGG+TGG 0.636294 8_3:-53671597 Msa1295510:CDS
TCACTTGTGAAGGCTAGTCG+TGG 0.641208 8_3:-53671864 Msa1295510:CDS
AGACTAGAAACAGTTCTCGC+GGG 0.641287 8_3:-53671821 Msa1295510:CDS
TTAGGAGTCATCGACAAATG+CGG 0.642811 8_3:+53672098 None:intergenic
GAATCAAGATGCTAGAGAGG+TGG 0.646817 8_3:-53669757 Msa1295510:three_prime_UTR
TTCAGCAGAATCCAGGACAA+AGG 0.647230 8_3:+53672682 None:intergenic
AAAATCTCTTCAGTTTGCAG+CGG 0.649941 8_3:-53672576 Msa1295510:CDS
GTATGGAAACTTATTAAACA+CGG 0.655583 8_3:-53672420 Msa1295510:CDS
CGTTTGCTGCAAATAAGAAG+GGG 0.657079 8_3:+53673986 None:intergenic
ACGACTAGCCTTCACAAGTG+AGG 0.663252 8_3:+53671866 None:intergenic
AAGAAAACGAAACAGTTCCG+AGG 0.668030 8_3:+53675154 None:intergenic
TCTATGATCACCAAATCACA+TGG 0.686101 8_3:+53669728 None:intergenic
TTACTTACAGGCAATAACAG+GGG 0.690645 8_3:-53673277 Msa1295510:intron
GGACGTGCTTCCTCTATCTG+CGG 0.693666 8_3:+53673600 None:intergenic
ACGCTCATGAAGTTCAGACA+AGG 0.697966 8_3:+53671758 None:intergenic
TGTGGGAAACGATAGCACAA+AGG 0.699806 8_3:-53670282 Msa1295510:CDS
AAAGTAGTAGTAAGTGCACG+AGG 0.699927 8_3:+53675195 None:intergenic
GGGCACGCATATTCCTCCGG+AGG 0.703584 8_3:+53672245 None:intergenic
CTTCAGGAGAAACATACGAG+CGG 0.727378 8_3:-53672184 Msa1295510:CDS
GGTATTCCTGATGAGGACCG+AGG 0.730980 8_3:+53673579 None:intergenic
AAACACGGGAGAACAAGAGG+AGG 0.731559 8_3:-53672405 Msa1295510:CDS
CATGACACAAAAGCTCTGCG+AGG 0.757823 8_3:-53671600 Msa1295510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGTTGAAAAAAAAAT+AGG + chr8_3:53669716-53669735 None:intergenic 10.0%
!!! TTTTTTGTGTAAATTTAAAA+TGG - chr8_3:53670399-53670418 Msa1295510:CDS 10.0%
!!! GATTAATATATATATTTTGA+AGG - chr8_3:53675466-53675485 Msa1295510:five_prime_UTR 10.0%
!!! AAATTTTTCCTTCTTTTTAT+AGG - chr8_3:53670507-53670526 Msa1295510:CDS 15.0%
!!! AATTTTTCCTTCTTTTTATA+GGG - chr8_3:53670508-53670527 Msa1295510:CDS 15.0%
!!! TAATGTATAATTTTACTTAC+AGG - chr8_3:53671806-53671825 Msa1295510:CDS 15.0%
!!! GGATATCTTTTTAAAAAAAA+CGG - chr8_3:53672015-53672034 Msa1295510:CDS 15.0%
!!! GATATCTTTTTAAAAAAAAC+GGG - chr8_3:53672016-53672035 Msa1295510:CDS 15.0%
!!! ATATCTTTTTAAAAAAAACG+GGG - chr8_3:53672017-53672036 Msa1295510:CDS 15.0%
!! AGTCATATATACAATAATAA+TGG + chr8_3:53675439-53675458 None:intergenic 15.0%
!! GTATGTTGTAAAATTTCAAA+CGG + chr8_3:53670427-53670446 None:intergenic 20.0%
!! AAAGAAGGAAAAATTTACAT+GGG + chr8_3:53670503-53670522 None:intergenic 20.0%
!! AAAAGAAGGAAAAATTTACA+TGG + chr8_3:53670504-53670523 None:intergenic 20.0%
!! AAAGAAAATGAGTATTAAGA+TGG + chr8_3:53670605-53670624 None:intergenic 20.0%
!!! ATTTTCTTTTTGAATTAGTG+TGG - chr8_3:53670616-53670635 Msa1295510:CDS 20.0%
!!! TTTTATGTACCTTAAAAAAG+CGG + chr8_3:53671191-53671210 None:intergenic 20.0%
!! ATATAAACTTTACAAAGAGT+TGG - chr8_3:53671740-53671759 Msa1295510:CDS 20.0%
!! GATTGTTCATAAAATAAGTA+TGG + chr8_3:53671955-53671974 None:intergenic 20.0%
!! TGTTACAATATATATCCATT+TGG - chr8_3:53672261-53672280 Msa1295510:CDS 20.0%
!! TAAAGGAATTAATATCAAAG+TGG - chr8_3:53673028-53673047 Msa1295510:intron 20.0%
!! TTAGTTAAAAAGTGAGTTTA+AGG - chr8_3:53673681-53673700 Msa1295510:intron 20.0%
!!! TAAGTATTTTGAAATTGGAA+AGG + chr8_3:53674187-53674206 None:intergenic 20.0%
!! AAAAAACAAGAGATAAAACT+GGG - chr8_3:53675011-53675030 Msa1295510:five_prime_UTR 20.0%
!!! TTTTGCCTTTTACTTTTCAT+GGG - chr8_3:53669849-53669868 Msa1295510:three_prime_UTR 25.0%
! CTTCAATTATTAAGATTCCT+CGG - chr8_3:53669924-53669943 Msa1295510:three_prime_UTR 25.0%
! ACTTTATCAAAACTGTGAAA+TGG + chr8_3:53670039-53670058 None:intergenic 25.0%
!!! GTTTTGATAAAGTCTTCATT+TGG - chr8_3:53670046-53670065 Msa1295510:three_prime_UTR 25.0%
!! ATATACAATTGTTGCTTCTA+TGG + chr8_3:53670088-53670107 None:intergenic 25.0%
!! AGTGAATTATTTCCATCTTT+TGG - chr8_3:53670169-53670188 Msa1295510:CDS 25.0%
! AAATAATCAGTTCCAAAAGA+TGG + chr8_3:53670184-53670203 None:intergenic 25.0%
!! CTCTTTTTAAATTTCTCCTA+TGG - chr8_3:53670216-53670235 Msa1295510:CDS 25.0%
! ACAAATGAAAGTAAGCTTAA+GGG + chr8_3:53670915-53670934 None:intergenic 25.0%
! AACAAATGAAAGTAAGCTTA+AGG + chr8_3:53670916-53670935 None:intergenic 25.0%
! CAAAATGCAAATTGAACTTT+GGG + chr8_3:53671025-53671044 None:intergenic 25.0%
! ATCAAGCTCATGTTAATTAA+TGG + chr8_3:53671051-53671070 None:intergenic 25.0%
! TTTATGTACCTTAAAAAAGC+GGG + chr8_3:53671190-53671209 None:intergenic 25.0%
! TGAACTCAACTATATTGTAA+TGG - chr8_3:53671215-53671234 Msa1295510:intron 25.0%
! GAACTCAACTATATTGTAAT+GGG - chr8_3:53671216-53671235 Msa1295510:intron 25.0%
!!! TTATTGGACTGTTTACTTTT+TGG - chr8_3:53671278-53671297 Msa1295510:intron 25.0%
!!! TATTGGACTGTTTACTTTTT+GGG - chr8_3:53671279-53671298 Msa1295510:intron 25.0%
!!! AGTCATCTGATTTTTTTTCT+AGG + chr8_3:53671316-53671335 None:intergenic 25.0%
! TCGATTGTAATTCATGTTAA+AGG - chr8_3:53671413-53671432 Msa1295510:intron 25.0%
!! ACTCAAGAAATTAGTTGATA+AGG - chr8_3:53671458-53671477 Msa1295510:intron 25.0%
!!! AATTAGTTGATAAGGTGTTA+AGG - chr8_3:53671466-53671485 Msa1295510:intron 25.0%
!! GTTCTTTTTATTATTTCAGC+TGG - chr8_3:53671628-53671647 Msa1295510:CDS 25.0%
!!! TGTTGTTGTTTATATCCATT+TGG - chr8_3:53672311-53672330 Msa1295510:CDS 25.0%
! AAGAAGTTACTACAAAAACT+TGG - chr8_3:53672595-53672614 Msa1295510:CDS 25.0%
!!! ATTTTTCAAGATCACCTTTT+TGG + chr8_3:53672635-53672654 None:intergenic 25.0%
! TTGTATCTTCTGATAAAGTA+TGG - chr8_3:53672658-53672677 Msa1295510:CDS 25.0%
! GTATGGAAACTTATTAAACA+CGG - chr8_3:53672675-53672694 Msa1295510:CDS 25.0%
! TATGGAAACTTATTAAACAC+GGG - chr8_3:53672676-53672695 Msa1295510:CDS 25.0%
! TACATCAACCTTAAAGATAT+CGG + chr8_3:53672874-53672893 None:intergenic 25.0%
!!! GCAATTTCTTTTTAGTTTTC+GGG + chr8_3:53672978-53672997 None:intergenic 25.0%
!!! GGCAATTTCTTTTTAGTTTT+CGG + chr8_3:53672979-53672998 None:intergenic 25.0%
!! TTTTCATATCTTTGACTACT+TGG + chr8_3:53673380-53673399 None:intergenic 25.0%
! TGATACATTGTTAGGTAATT+TGG - chr8_3:53673590-53673609 Msa1295510:CDS 25.0%
! TATTATATGAAGCGTATGTT+TGG - chr8_3:53673620-53673639 Msa1295510:CDS 25.0%
!! ATTGATTCTAACTTAAAGCT+AGG + chr8_3:53673798-53673817 None:intergenic 25.0%
!!! TGAAGACTTAAAACTGATTT+TGG + chr8_3:53673863-53673882 None:intergenic 25.0%
!!! TTAGTGCATGTTTTGATTTT+GGG + chr8_3:53673903-53673922 None:intergenic 25.0%
! CTTTCAAAACAATATTCCAT+GGG - chr8_3:53674087-53674106 Msa1295510:intron 25.0%
!! CAAGTTTTCCTTTTTATTCT+AGG + chr8_3:53674113-53674132 None:intergenic 25.0%
!!! ATTTTAAAGATCCTTGATTC+TGG - chr8_3:53674427-53674446 Msa1295510:intron 25.0%
!! CGAAAAATGGTAGTAATTTT+GGG + chr8_3:53674546-53674565 None:intergenic 25.0%
!! TCGAAAAATGGTAGTAATTT+TGG + chr8_3:53674547-53674566 None:intergenic 25.0%
! CAAAAAACAAGAGATAAAAC+TGG - chr8_3:53675010-53675029 Msa1295510:five_prime_UTR 25.0%
! TACTATTTGTGATTGGATAT+AGG - chr8_3:53675099-53675118 Msa1295510:five_prime_UTR 25.0%
!!! TATTTTGATCTCATCATAGA+TGG + chr8_3:53675159-53675178 None:intergenic 25.0%
!! TACGTTTGATTTTGCTATCA+TGG - chr8_3:53669797-53669816 Msa1295510:three_prime_UTR 30.0%
!! ACGTTTGATTTTGCTATCAT+GGG - chr8_3:53669798-53669817 Msa1295510:three_prime_UTR 30.0%
AGGCAAAAGTTGAATCTTTA+TGG + chr8_3:53669837-53669856 None:intergenic 30.0%
!! CTTTTGCCTTTTACTTTTCA+TGG - chr8_3:53669848-53669867 Msa1295510:three_prime_UTR 30.0%
ACTAACCCATGAAAAGTAAA+AGG + chr8_3:53669857-53669876 None:intergenic 30.0%
ACGAGGTCATTATTGAATTT+AGG + chr8_3:53669886-53669905 None:intergenic 30.0%
TCAAAATTGAGCTACATAGA+AGG - chr8_3:53670013-53670032 Msa1295510:three_prime_UTR 30.0%
ATCATCATCATCATCATCAT+AGG - chr8_3:53670106-53670125 Msa1295510:CDS 30.0%
CGAAAAAAAAGACTAACCAT+AGG + chr8_3:53670235-53670254 None:intergenic 30.0%
! ATGCTATAGTTCTACTCTAT+TGG - chr8_3:53670468-53670487 Msa1295510:CDS 30.0%
TAACATGCCCTATAAAAAGA+AGG + chr8_3:53670518-53670537 None:intergenic 30.0%
! TAGTTTGTGGCTAATTTGAT+AGG - chr8_3:53670536-53670555 Msa1295510:CDS 30.0%
AGTTTGTGGCTAATTTGATA+GGG - chr8_3:53670537-53670556 Msa1295510:CDS 30.0%
GAAAATGAGTATTAAGATGG+AGG + chr8_3:53670602-53670621 None:intergenic 30.0%
ATAGGATCATTAACACTATG+TGG + chr8_3:53670652-53670671 None:intergenic 30.0%
TATGTGATGTGAGAAATTGT+AGG - chr8_3:53670715-53670734 Msa1295510:CDS 30.0%
ATGTGATGTGAGAAATTGTA+GGG - chr8_3:53670716-53670735 Msa1295510:CDS 30.0%
CATATGCAGAAGATGATTAA+CGG + chr8_3:53670940-53670959 None:intergenic 30.0%
CCAAAATGCAAATTGAACTT+TGG + chr8_3:53671026-53671045 None:intergenic 30.0%
! CCAAAGTTCAATTTGCATTT+TGG - chr8_3:53671023-53671042 Msa1295510:intron 30.0%
TTATGTACCTTAAAAAAGCG+GGG + chr8_3:53671189-53671208 None:intergenic 30.0%
!!! ATTGGACTGTTTACTTTTTG+GGG - chr8_3:53671280-53671299 Msa1295510:intron 30.0%
CATGAATTACAATCGATGAA+AGG + chr8_3:53671409-53671428 None:intergenic 30.0%
!! TTTGGCTTTATCAATTGTAC+TGG + chr8_3:53671559-53671578 None:intergenic 30.0%
AATAAAAAGAACTACGAACC+AGG + chr8_3:53671620-53671639 None:intergenic 30.0%
CTTTCATGAAAAATGAATGG+CGG + chr8_3:53671673-53671692 None:intergenic 30.0%
GAGCTTTCATGAAAAATGAA+TGG + chr8_3:53671676-53671695 None:intergenic 30.0%
!!! TGAAAGCTCCTGATTTTTTT+AGG - chr8_3:53671687-53671706 Msa1295510:CDS 30.0%
!!! GAAAGCTCCTGATTTTTTTA+GGG - chr8_3:53671688-53671707 Msa1295510:CDS 30.0%
TCAGATACCCTAAAAAAATC+AGG + chr8_3:53671698-53671717 None:intergenic 30.0%
! TTTTACTTACAGGCAATAAC+AGG - chr8_3:53671816-53671835 Msa1295510:CDS 30.0%
TTTACTTACAGGCAATAACA+GGG - chr8_3:53671817-53671836 Msa1295510:CDS 30.0%
AATTCTCTCAAAATGCCAAA+AGG - chr8_3:53671845-53671864 Msa1295510:CDS 30.0%
AGATATAGTTCCTGTTATGT+TGG - chr8_3:53671905-53671924 Msa1295510:CDS 30.0%
ATAGACTCTTCTGCATTAAA+TGG + chr8_3:53671977-53671996 None:intergenic 30.0%
!! TTTTTAAAAAAAACGGGGCA+AGG - chr8_3:53672022-53672041 Msa1295510:CDS 30.0%
!! TTTTAAAAAAAACGGGGCAA+GGG - chr8_3:53672023-53672042 Msa1295510:CDS 30.0%
TCATCTTTCAATGTCTTTGA+GGG - chr8_3:53672078-53672097 Msa1295510:CDS 30.0%
TTCAAATTACTGAGTCAATG+AGG + chr8_3:53672160-53672179 None:intergenic 30.0%
CATTAAAATGAAGCTCCAAA+TGG + chr8_3:53672329-53672348 None:intergenic 30.0%
ACAAAAACTTGGACAAAATG+AGG - chr8_3:53672606-53672625 Msa1295510:CDS 30.0%
ACAAAATGAGGAAACCAAAA+AGG - chr8_3:53672618-53672637 Msa1295510:CDS 30.0%
ACATCAACCTTAAAGATATC+GGG + chr8_3:53672873-53672892 None:intergenic 30.0%
ATACAGAAATGGTTTGATGA+GGG - chr8_3:53672940-53672959 Msa1295510:intron 30.0%
!! AATTCCTTTAAAGCAACGTT+AGG + chr8_3:53673018-53673037 None:intergenic 30.0%
GATCTTAGTAACGTATCATT+TGG - chr8_3:53673177-53673196 Msa1295510:intron 30.0%
TAGTAACGTATCATTTGGAT+CGG - chr8_3:53673182-53673201 Msa1295510:CDS 30.0%
!!! TTTATTTTGCCTTCGCAATT+TGG - chr8_3:53673563-53673582 Msa1295510:CDS 30.0%
TTGGTACTTGATACATTGTT+AGG - chr8_3:53673582-53673601 Msa1295510:CDS 30.0%
TGAGTGTAAAAAATCACGTT+TGG - chr8_3:53673755-53673774 Msa1295510:intron 30.0%
AAGCAAAATCAATTCTAGTC+AGG - chr8_3:53673823-53673842 Msa1295510:intron 30.0%
!! AAACTGATTTTGGTGTGTTT+GGG + chr8_3:53673853-53673872 None:intergenic 30.0%
!! AAAACTGATTTTGGTGTGTT+TGG + chr8_3:53673854-53673873 None:intergenic 30.0%
!!! CTTAGTGCATGTTTTGATTT+TGG + chr8_3:53673904-53673923 None:intergenic 30.0%
ATCTACTTTGTCACAACTTA+TGG + chr8_3:53674056-53674075 None:intergenic 30.0%
!!! CCATGGAATATTGTTTTGAA+AGG + chr8_3:53674089-53674108 None:intergenic 30.0%
CCTTTCAAAACAATATTCCA+TGG - chr8_3:53674086-53674105 Msa1295510:intron 30.0%
!!! TTTTTTTCGCGCATTGAAAT+TGG + chr8_3:53674159-53674178 None:intergenic 30.0%
!!! GAGCGTAAGTATTTTGAAAT+TGG + chr8_3:53674192-53674211 None:intergenic 30.0%
TAAAATAGAAGTCAGTGCAT+TGG + chr8_3:53674413-53674432 None:intergenic 30.0%
TTATTCTAATAGCTTTCCGT+TGG + chr8_3:53674465-53674484 None:intergenic 30.0%
GTACGAACAAAATTCAGAAT+TGG + chr8_3:53674503-53674522 None:intergenic 30.0%
GTATCTGTTGTTGAAACTAA+GGG - chr8_3:53674634-53674653 Msa1295510:intron 30.0%
! TCTTGTGTTGTTGAAATACT+TGG - chr8_3:53674664-53674683 Msa1295510:intron 30.0%
! CTTGTGTTGTTGAAATACTT+GGG - chr8_3:53674665-53674684 Msa1295510:intron 30.0%
TTGGAGATATTGACAAGATA+CGG + chr8_3:53674793-53674812 None:intergenic 30.0%
! CTTTTCTTCATATTGATCGT+TGG + chr8_3:53674923-53674942 None:intergenic 30.0%
!! TGATAGCTTGTTCAAAAATG+TGG + chr8_3:53674962-53674981 None:intergenic 30.0%
! CATTTTTGAACAAGCTATCA+CGG - chr8_3:53674962-53674981 Msa1295510:intron 30.0%
TCTGTCTTACTATTTGTGAT+TGG - chr8_3:53675092-53675111 Msa1295510:five_prime_UTR 30.0%
!! TAATTTTGGTCAGTAACTTC+TGG - chr8_3:53675203-53675222 Msa1295510:five_prime_UTR 30.0%
ATAGTTGTAGAAATAGCCTT+AGG - chr8_3:53675392-53675411 Msa1295510:five_prime_UTR 30.0%
AAACTGAGTTTCAAGGAAAG+TGG + chr8_3:53669759-53669778 None:intergenic 35.0%
AAAGTGCAAACTGAGTTTCA+AGG + chr8_3:53669766-53669785 None:intergenic 35.0%
! AGTTTGGTGAAGATTAAGCA+TGG + chr8_3:53669979-53669998 None:intergenic 35.0%
AAACCCAAGAGCAATTAGAT+GGG + chr8_3:53670311-53670330 None:intergenic 35.0%
ATCTAATTGCTCTTGGGTTT+CGG - chr8_3:53670311-53670330 Msa1295510:CDS 35.0%
! TATAGTTCTACTCTATTGGC+TGG - chr8_3:53670472-53670491 Msa1295510:CDS 35.0%
! TTATAGGGCATGTTAGTTTG+TGG - chr8_3:53670523-53670542 Msa1295510:CDS 35.0%
GTTTGTGGCTAATTTGATAG+GGG - chr8_3:53670538-53670557 Msa1295510:CDS 35.0%
TTTGTGGCTAATTTGATAGG+GGG - chr8_3:53670539-53670558 Msa1295510:CDS 35.0%
ATCAATGGTAACACGTGAAT+AGG + chr8_3:53670670-53670689 None:intergenic 35.0%
CATATGCACAAGATGATCAA+TGG + chr8_3:53670685-53670704 None:intergenic 35.0%
TTACCTCATAAGAGTAGAAC+AGG + chr8_3:53670963-53670982 None:intergenic 35.0%
! GAGGTAAGCTTCATTCTTTT+TGG - chr8_3:53670976-53670995 Msa1295510:intron 35.0%
AACTATCAGTTCCCATTCAA+GGG + chr8_3:53671140-53671159 None:intergenic 35.0%
TAAATGCAACAGGGATTGAA+AGG + chr8_3:53671261-53671280 None:intergenic 35.0%
TCAATCCCTGTTGCATTTAT+TGG - chr8_3:53671262-53671281 Msa1295510:intron 35.0%
ACAGTCCAATAAATGCAACA+GGG + chr8_3:53671270-53671289 None:intergenic 35.0%
AACAGTCCAATAAATGCAAC+AGG + chr8_3:53671271-53671290 None:intergenic 35.0%
!! GTGTTATTTGTAACTTCGCT+TGG - chr8_3:53671369-53671388 Msa1295510:intron 35.0%
TTGTAACTTCGCTTGGATAT+TGG - chr8_3:53671376-53671395 Msa1295510:intron 35.0%
! GCAATTTTGCAGAAGTTGTT+TGG + chr8_3:53671577-53671596 None:intergenic 35.0%
TGATTCTAGTGTACTTTACC+TGG - chr8_3:53671599-53671618 Msa1295510:CDS 35.0%
AGCTGGTCAAATCTGTATAA+TGG - chr8_3:53671645-53671664 Msa1295510:CDS 35.0%
GCTGGTCAAATCTGTATAAT+GGG - chr8_3:53671646-53671665 Msa1295510:CDS 35.0%
TTACTTACAGGCAATAACAG+GGG - chr8_3:53671818-53671837 Msa1295510:CDS 35.0%
! CTAATGACTTTCTTGCCTTT+TGG + chr8_3:53671863-53671882 None:intergenic 35.0%
CAGGAACTATATCTTGAATC+TGG + chr8_3:53671899-53671918 None:intergenic 35.0%
TATTACCTTGTTCAGTGATG+TGG - chr8_3:53671994-53672013 Msa1295510:CDS 35.0%
CTCATCTTTCAATGTCTTTG+AGG - chr8_3:53672077-53672096 Msa1295510:CDS 35.0%
TAAGCTTAGTTGTAGGAGTT+TGG + chr8_3:53672135-53672154 None:intergenic 35.0%
GAATAGTTGCATGTCTCTAT+AGG - chr8_3:53672177-53672196 Msa1295510:CDS 35.0%
!! CTCGAATAGTTGATGATCTT+AGG - chr8_3:53672383-53672402 Msa1295510:CDS 35.0%
AACCACAGATAACGATTCAA+AGG - chr8_3:53672483-53672502 Msa1295510:CDS 35.0%
TTCCTTTGAATCGTTATCTG+TGG + chr8_3:53672488-53672507 None:intergenic 35.0%
AAAATCTCTTCAGTTTGCAG+CGG - chr8_3:53672519-53672538 Msa1295510:CDS 35.0%
TACTGATCGTGGTTTGAATA+CGG + chr8_3:53672796-53672815 None:intergenic 35.0%
TATTCAAACCACGATCAGTA+TGG - chr8_3:53672796-53672815 Msa1295510:intron 35.0%
GATACAGAAATGGTTTGATG+AGG - chr8_3:53672939-53672958 Msa1295510:intron 35.0%
GATACGTTACTAAGATCCAT+TGG + chr8_3:53673174-53673193 None:intergenic 35.0%
TGACACAGAGTTAAAAGCTT+CGG + chr8_3:53673421-53673440 None:intergenic 35.0%
ACTGGGTCAATGAAATTATC+CGG + chr8_3:53673444-53673463 None:intergenic 35.0%
TGCTCAGAAATCTCATAACT+GGG + chr8_3:53673461-53673480 None:intergenic 35.0%
!! TGGAATTTACAAAGTACTGC+AGG - chr8_3:53673535-53673554 Msa1295510:CDS 35.0%
TATCAAGTACCAAATTGCGA+AGG + chr8_3:53673575-53673594 None:intergenic 35.0%
AAAATCACGTTTGGTTGCAA+AGG - chr8_3:53673764-53673783 Msa1295510:intron 35.0%
!! AACTGATTTTGGTGTGTTTG+GGG + chr8_3:53673852-53673871 None:intergenic 35.0%
TTCCACTTTCGTAAAAGACA+CGG + chr8_3:53673981-53674000 None:intergenic 35.0%
TACGAAAGTGGAATTTGTAG+AGG - chr8_3:53673988-53674007 Msa1295510:five_prime_UTR 35.0%
!! TGTGCATCTGCTTTTGATAT+TGG - chr8_3:53674216-53674235 Msa1295510:intron 35.0%
!! GTGCATCTGCTTTTGATATT+GGG - chr8_3:53674217-53674236 Msa1295510:intron 35.0%
!! CTGCTTTTGATATTGGGTTT+TGG - chr8_3:53674223-53674242 Msa1295510:intron 35.0%
TTGTGTTCTTCATGCAGAAA+TGG - chr8_3:53674256-53674275 Msa1295510:intron 35.0%
GCATATACAGTCTCTTGAAA+GGG + chr8_3:53674578-53674597 None:intergenic 35.0%
TGCATATACAGTCTCTTGAA+AGG + chr8_3:53674579-53674598 None:intergenic 35.0%
GGTATCTGTTGTTGAAACTA+AGG - chr8_3:53674633-53674652 Msa1295510:intron 35.0%
!! GGAATATTGTGAGTTGGTTA+TGG - chr8_3:53674753-53674772 Msa1295510:intron 35.0%
!! ATATTGTGAGTTGGTTATGG+AGG - chr8_3:53674756-53674775 Msa1295510:intron 35.0%
TCTTGTCAATATCTCCAATG+TGG - chr8_3:53674795-53674814 Msa1295510:intron 35.0%
CTTGTCAATATCTCCAATGT+GGG - chr8_3:53674796-53674815 Msa1295510:intron 35.0%
CCTTATTATAAGGGACATTC+CGG - chr8_3:53675038-53675057 Msa1295510:five_prime_UTR 35.0%
TTCTTTCATAAGTTGTCTGC+TGG - chr8_3:53675179-53675198 Msa1295510:five_prime_UTR 35.0%
TCTTTCATAAGTTGTCTGCT+GGG - chr8_3:53675180-53675199 Msa1295510:five_prime_UTR 35.0%
ATCTTGATTCTTGAGAGAAG+GGG + chr8_3:53675328-53675347 None:intergenic 35.0%
CATCTTGATTCTTGAGAGAA+GGG + chr8_3:53675329-53675348 None:intergenic 35.0%
TCTATGATCACCAAATCACA+TGG + chr8_3:53675370-53675389 None:intergenic 35.0%
! TGTAGAAATAGCCTTAGGTT+AGG - chr8_3:53675397-53675416 Msa1295510:five_prime_UTR 35.0%
TGTGATGTTTGACCAGTAGA+GGG + chr8_3:53669644-53669663 None:intergenic 40.0%
! TCCTTCTACTTTCATCGACT+TGG - chr8_3:53669667-53669686 Msa1295510:three_prime_UTR 40.0%
ACCAAGTCGATGAAAGTAGA+AGG + chr8_3:53669671-53669690 None:intergenic 40.0%
AAAGTAGTAGTAAGTGCACG+AGG + chr8_3:53669903-53669922 None:intergenic 40.0%
AAGAAAACGAAACAGTTCCG+AGG + chr8_3:53669944-53669963 None:intergenic 40.0%
TGGTTCAAATCCAGCATACT+TGG + chr8_3:53670264-53670283 None:intergenic 40.0%
AAGTATGCTGGATTTGAACC+AGG - chr8_3:53670263-53670282 Msa1295510:CDS 40.0%
GCAATTAGATGGGATGGTAA+GGG + chr8_3:53670301-53670320 None:intergenic 40.0%
AGCAATTAGATGGGATGGTA+AGG + chr8_3:53670302-53670321 None:intergenic 40.0%
CATCCCATCTAATTGCTCTT+GGG - chr8_3:53670305-53670324 Msa1295510:CDS 40.0%
GAAACCCAAGAGCAATTAGA+TGG + chr8_3:53670312-53670331 None:intergenic 40.0%
TAGCAGCAAGGATTAAACCA+TGG - chr8_3:53670575-53670594 Msa1295510:CDS 40.0%
AGTATTAAGATGGAGGTCCA+TGG + chr8_3:53670595-53670614 None:intergenic 40.0%
CTCACATCACATAGATCAAG+TGG + chr8_3:53670708-53670727 None:intergenic 40.0%
! TCTGTTTGCGATGGGAATTT+TGG - chr8_3:53670739-53670758 Msa1295510:CDS 40.0%
! TTTGCGATGGGAATTTTGGA+GGG - chr8_3:53670743-53670762 Msa1295510:CDS 40.0%
GTAAGCTTAAGGGTCTGTTT+GGG + chr8_3:53670905-53670924 None:intergenic 40.0%
AGTAAGCTTAAGGGTCTGTT+TGG + chr8_3:53670906-53670925 None:intergenic 40.0%
ATGCCTGTTCTACTCTTATG+AGG - chr8_3:53670957-53670976 Msa1295510:intron 40.0%
! CGTTTGCTGCAAATAAGAAG+GGG + chr8_3:53671112-53671131 None:intergenic 40.0%
! CCGTTTGCTGCAAATAAGAA+GGG + chr8_3:53671113-53671132 None:intergenic 40.0%
! CCCTTCTTATTTGCAGCAAA+CGG - chr8_3:53671110-53671129 Msa1295510:intron 40.0%
! ACCGTTTGCTGCAAATAAGA+AGG + chr8_3:53671114-53671133 None:intergenic 40.0%
CAACTATCAGTTCCCATTCA+AGG + chr8_3:53671141-53671160 None:intergenic 40.0%
GGGAACTGATAGTTGTAAAG+TGG - chr8_3:53671146-53671165 Msa1295510:intron 40.0%
GATATCCACATCACTGAACA+AGG + chr8_3:53672002-53672021 None:intergenic 40.0%
TGAGGTGTAAGCTTAGTTGT+AGG + chr8_3:53672142-53672161 None:intergenic 40.0%
! AAGTCTTATCCCACTAAGTG+GGG + chr8_3:53672288-53672307 None:intergenic 40.0%
! CAAGTCTTATCCCACTAAGT+GGG + chr8_3:53672289-53672308 None:intergenic 40.0%
ATGAGAGAATTGCTCCAACA+AGG - chr8_3:53672454-53672473 Msa1295510:CDS 40.0%
GAATCGTTATCTGTGGTTGA+AGG + chr8_3:53672481-53672500 None:intergenic 40.0%
! CTCTATTACGATGCTTGTTG+CGG + chr8_3:53672563-53672582 None:intergenic 40.0%
ATTAAACACGGGAGAACAAG+AGG - chr8_3:53672687-53672706 Msa1295510:CDS 40.0%
TTAGGAGTCATCGACAAATG+CGG + chr8_3:53673000-53673019 None:intergenic 40.0%
! GACTCCTAACGTTGCTTTAA+AGG - chr8_3:53673011-53673030 Msa1295510:intron 40.0%
TCTCCATTCCTAATCCAAGT+AGG - chr8_3:53673067-53673086 Msa1295510:intron 40.0%
! TTGCCTACTTGGATTAGGAA+TGG + chr8_3:53673073-53673092 None:intergenic 40.0%
AAGCTTCAGTCACTTCCATT+AGG - chr8_3:53673115-53673134 Msa1295510:intron 40.0%
GTCACTTCCATTAGGAGTTT+CGG - chr8_3:53673123-53673142 Msa1295510:intron 40.0%
AGTTTCGGAAGTTCCATGAA+TGG - chr8_3:53673138-53673157 Msa1295510:intron 40.0%
TTCAGATTCCTCACTTGTGA+AGG - chr8_3:53673221-53673240 Msa1295510:CDS 40.0%
AAGACTAGAAACAGTTCTCG+CGG - chr8_3:53673273-53673292 Msa1295510:intron 40.0%
TGAACTTCATGAGCGTCAAT+GGG - chr8_3:53673344-53673363 Msa1295510:intron 40.0%
!! AGCTTTTAACTCTGTGTCAC+CGG - chr8_3:53673422-53673441 Msa1295510:intron 40.0%
GTGCTCAGAAATCTCATAAC+TGG + chr8_3:53673462-53673481 None:intergenic 40.0%
AGGTGGATGTCAATTACTGT+TGG - chr8_3:53673515-53673534 Msa1295510:CDS 40.0%
!! GAAGCGTATGTTTGGTTCTA+CGG - chr8_3:53673628-53673647 Msa1295510:CDS 40.0%
!! ACTGATTTTGGTGTGTTTGG+GGG + chr8_3:53673851-53673870 None:intergenic 40.0%
TAAGCCTGTGTTTGGTATCA+CGG - chr8_3:53673920-53673939 Msa1295510:CDS 40.0%
! TACCGTGTCTTTTACGAAAG+TGG - chr8_3:53673976-53673995 Msa1295510:five_prime_UTR 40.0%
TCCATGGGCCTAGAATAAAA+AGG - chr8_3:53674102-53674121 Msa1295510:intron 40.0%
! TCCTTTTTATTCTAGGCCCA+TGG + chr8_3:53674106-53674125 None:intergenic 40.0%
TGAAGATACATGCAGTGTGT+TGG - chr8_3:53674294-53674313 Msa1295510:intron 40.0%
TGGAAGAATTGTCGAACCAT+TGG - chr8_3:53674362-53674381 Msa1295510:intron 40.0%
AGCTGCAATGTTCGCTTTAT+CGG + chr8_3:53674389-53674408 None:intergenic 40.0%
ACTCTTGGTTACCAGAATCA+AGG + chr8_3:53674441-53674460 None:intergenic 40.0%
AGGGACTTGTCTTCGAAAAA+TGG + chr8_3:53674559-53674578 None:intergenic 40.0%
CGAAGAAAAGGAATTTGCAC+TGG - chr8_3:53674699-53674718 Msa1295510:intron 40.0%
! TAGCACAAAGGTGTATGCAT+TGG - chr8_3:53674825-53674844 Msa1295510:intron 40.0%
TCTCGACATCCCTTAAAAGT+CGG + chr8_3:53674858-53674877 None:intergenic 40.0%
TTGAACAAGCTATCACGGTT+CGG - chr8_3:53674967-53674986 Msa1295510:intron 40.0%
ACTGGGCTCTCCTTATTATA+AGG - chr8_3:53675028-53675047 Msa1295510:five_prime_UTR 40.0%
CTGGGCTCTCCTTATTATAA+GGG - chr8_3:53675029-53675048 Msa1295510:five_prime_UTR 40.0%
CCGGAATGTCCCTTATAATA+AGG + chr8_3:53675041-53675060 None:intergenic 40.0%
TTATAAGGGACATTCCGGAT+TGG - chr8_3:53675043-53675062 Msa1295510:five_prime_UTR 40.0%
! AGTTGTCTGCTGGGTAATTT+TGG - chr8_3:53675189-53675208 Msa1295510:five_prime_UTR 40.0%
GACATACCAAAGCCAAGAAA+AGG - chr8_3:53675278-53675297 Msa1295510:five_prime_UTR 40.0%
! CAACTACCTTTTCTTGGCTT+TGG + chr8_3:53675287-53675306 None:intergenic 40.0%
CAAAGCCAAGAAAAGGTAGT+TGG - chr8_3:53675285-53675304 Msa1295510:five_prime_UTR 40.0%
! ACTTGCCAACTACCTTTTCT+TGG + chr8_3:53675293-53675312 None:intergenic 40.0%
GCATCTTGATTCTTGAGAGA+AGG + chr8_3:53675330-53675349 None:intergenic 40.0%
CAAGAATCAAGATGCTAGAG+AGG - chr8_3:53675335-53675354 Msa1295510:five_prime_UTR 40.0%
GTGTGATGTTTGACCAGTAG+AGG + chr8_3:53669645-53669664 None:intergenic 45.0%
GAGACATTTCAACGCGAGTT+TGG + chr8_3:53669995-53670014 None:intergenic 45.0%
TTCGTGTCAACCAAGTATGC+TGG - chr8_3:53670251-53670270 Msa1295510:CDS 45.0%
GGATGGTAAGGGATCTCTTT+CGG + chr8_3:53670290-53670309 None:intergenic 45.0%
CCAAGAGCAATTAGATGGGA+TGG + chr8_3:53670307-53670326 None:intergenic 45.0%
CCATCCCATCTAATTGCTCT+TGG - chr8_3:53670304-53670323 Msa1295510:CDS 45.0%
AATTGCTCTTGGGTTTCGGT+TGG - chr8_3:53670315-53670334 Msa1295510:CDS 45.0%
TGGCTAATTTGATAGGGGGA+GGG - chr8_3:53670543-53670562 Msa1295510:CDS 45.0%
ATTGTAGGGTCTGTTTGCGA+TGG - chr8_3:53670730-53670749 Msa1295510:CDS 45.0%
TTGTAGGGTCTGTTTGCGAT+GGG - chr8_3:53670731-53670750 Msa1295510:CDS 45.0%
! GTTTGCGATGGGAATTTTGG+AGG - chr8_3:53670742-53670761 Msa1295510:CDS 45.0%
!! AATTTTGGAGGGCAGGGTTA+TGG - chr8_3:53670754-53670773 Msa1295510:CDS 45.0%
CAAACGGTACTCCCTTGAAT+GGG - chr8_3:53671126-53671145 Msa1295510:intron 45.0%
!!! ACCAGATCCCCGCTTTTTTA+AGG - chr8_3:53671179-53671198 Msa1295510:intron 45.0%
ACCTTAAAAAAGCGGGGATC+TGG + chr8_3:53671183-53671202 None:intergenic 45.0%
AAGGATCTTTCCGCAGATAG+AGG - chr8_3:53671485-53671504 Msa1295510:intron 45.0%
! TGTTTGAACGCTGCCTTTTG+AGG - chr8_3:53672101-53672120 Msa1295510:CDS 45.0%
!! TTTGGCCTTGTAGCCTCAAA+AGG + chr8_3:53672117-53672136 None:intergenic 45.0%
! CCAAGTCTTATCCCACTAAG+TGG + chr8_3:53672290-53672309 None:intergenic 45.0%
CCACTTAGTGGGATAAGACT+TGG - chr8_3:53672287-53672306 Msa1295510:CDS 45.0%
TTCAGCAGAATCCAGGACAA+AGG + chr8_3:53672416-53672435 None:intergenic 45.0%
ATTCTGCTGAAGAAGAGGCT+GGG - chr8_3:53672425-53672444 Msa1295510:CDS 45.0%
CTGGAATTCTCATTCGCTAC+AGG + chr8_3:53672736-53672755 None:intergenic 45.0%
GGTGCGTAAAGAATCATGAC+TGG + chr8_3:53672755-53672774 None:intergenic 45.0%
CGGCTCAGAATTCACACTAT+CGG + chr8_3:53672776-53672795 None:intergenic 45.0%
CACGAATTCCATACTGATCG+TGG + chr8_3:53672807-53672826 None:intergenic 45.0%
ATGCGTGCCCGATATCTTTA+AGG - chr8_3:53672863-53672882 Msa1295510:intron 45.0%
GATCCTGTTGTCATTGCTTC+AGG - chr8_3:53672895-53672914 Msa1295510:intron 45.0%
TCTCCTGAAGCAATGACAAC+AGG + chr8_3:53672901-53672920 None:intergenic 45.0%
CTTCAGGAGAAACATACGAG+CGG - chr8_3:53672911-53672930 Msa1295510:intron 45.0%
AGCGGATGTGGATACAGAAA+TGG - chr8_3:53672929-53672948 Msa1295510:intron 45.0%
TCCTAATCCAAGTAGGCAAG+CGG - chr8_3:53673074-53673093 Msa1295510:intron 45.0%
GGAACTTCCGAAACTCCTAA+TGG + chr8_3:53673133-53673152 None:intergenic 45.0%
TGGCACGTTCAAACCATTCA+TGG + chr8_3:53673154-53673173 None:intergenic 45.0%
GAATGGTTTGAACGTGCCAA+TGG - chr8_3:53673155-53673174 Msa1295510:intron 45.0%
AGACTAGAAACAGTTCTCGC+GGG - chr8_3:53673274-53673293 Msa1295510:intron 45.0%
CAATCTCGTTCGCAGATACA+TGG - chr8_3:53673300-53673319 Msa1295510:intron 45.0%
GCAGATACATGGCTCATATC+TGG - chr8_3:53673311-53673330 Msa1295510:intron 45.0%
ACGCTCATGAAGTTCAGACA+AGG + chr8_3:53673340-53673359 None:intergenic 45.0%
CTGAACTTCATGAGCGTCAA+TGG - chr8_3:53673343-53673362 Msa1295510:intron 45.0%
ACATGCACTAAGCCTGTGTT+TGG - chr8_3:53673912-53673931 Msa1295510:intron 45.0%
TGTACCGTGATACCAAACAC+AGG + chr8_3:53673927-53673946 None:intergenic 45.0%
! TGGAGAAGCTCTTGCTATAC+TGG - chr8_3:53674342-53674361 Msa1295510:intron 45.0%
TGTTCGCTTTATCGGACCAA+TGG + chr8_3:53674381-53674400 None:intergenic 45.0%
!! CTGGTAACCAAGAGTACCAA+CGG - chr8_3:53674446-53674465 Msa1295510:intron 45.0%
TAGCTTTCCGTTGGTACTCT+TGG + chr8_3:53674456-53674475 None:intergenic 45.0%
TGTTCGTACATCGTGTCTCT+CGG - chr8_3:53674514-53674533 Msa1295510:intron 45.0%
! TTCCTTTTCTTCGTCTGTGC+TGG + chr8_3:53674692-53674711 None:intergenic 45.0%
ACGCGTGGAATATTGTGAGT+TGG - chr8_3:53674747-53674766 Msa1295510:intron 45.0%
!! TTGTGAGTTGGTTATGGAGG+AGG - chr8_3:53674759-53674778 Msa1295510:intron 45.0%
!! TGTGAGTTGGTTATGGAGGA+GGG - chr8_3:53674760-53674779 Msa1295510:intron 45.0%
TGTGCTATCGTTTCCCACAT+TGG + chr8_3:53674812-53674831 None:intergenic 45.0%
TGTGGGAAACGATAGCACAA+AGG - chr8_3:53674813-53674832 Msa1295510:intron 45.0%
! TGGAACTGCTCCGACTTTTA+AGG - chr8_3:53674845-53674864 Msa1295510:intron 45.0%
! GGAACTGCTCCGACTTTTAA+GGG - chr8_3:53674846-53674865 Msa1295510:intron 45.0%
CATGTTTGCATCCACCAATC+CGG + chr8_3:53675060-53675079 None:intergenic 45.0%
CTTGAGAGAAGGGGAGAAAA+GGG + chr8_3:53675319-53675338 None:intergenic 45.0%
TCTTGAGAGAAGGGGAGAAA+AGG + chr8_3:53675320-53675339 None:intergenic 45.0%
GAATCAAGATGCTAGAGAGG+TGG - chr8_3:53675338-53675357 Msa1295510:five_prime_UTR 45.0%
GTGGTTAGTGCCATGTGATT+TGG - chr8_3:53675357-53675376 Msa1295510:five_prime_UTR 45.0%
!!! ATTAATATATATATTTTGAA+GGG - chr8_3:53675467-53675486 Msa1295510:five_prime_UTR 5.0%
GTTGTCTTGTCTCCCTCTAC+TGG - chr8_3:53669629-53669648 Msa1295510:three_prime_UTR 50.0%
TAAGGGATCTCTTTCGGTCC+TGG + chr8_3:53670284-53670303 None:intergenic 50.0%
GTGGCTAATTTGATAGGGGG+AGG - chr8_3:53670542-53670561 Msa1295510:CDS 50.0%
GGCTAATTTGATAGGGGGAG+GGG - chr8_3:53670544-53670563 Msa1295510:CDS 50.0%
GCTAATTTGATAGGGGGAGG+GGG - chr8_3:53670545-53670564 Msa1295510:CDS 50.0%
GGGGGAATATGTTAGCAGCA+AGG - chr8_3:53670563-53670582 Msa1295510:CDS 50.0%
!! GATGGGAATTTTGGAGGGCA+GGG - chr8_3:53670748-53670767 Msa1295510:CDS 50.0%
CTTAAGGGTCTGTTTGGGAG+GGG + chr8_3:53670900-53670919 None:intergenic 50.0%
GCTTAAGGGTCTGTTTGGGA+GGG + chr8_3:53670901-53670920 None:intergenic 50.0%
AGCTTAAGGGTCTGTTTGGG+AGG + chr8_3:53670902-53670921 None:intergenic 50.0%
GCAAACGGTACTCCCTTGAA+TGG - chr8_3:53671125-53671144 Msa1295510:intron 50.0%
! AGATAGAGGAAGCACGTCCT+CGG - chr8_3:53671499-53671518 Msa1295510:intron 50.0%
CAGAGCAGGTATTCCTGATG+AGG + chr8_3:53671526-53671545 None:intergenic 50.0%
CTCATCAGGAATACCTGCTC+TGG - chr8_3:53671524-53671543 Msa1295510:intron 50.0%
CTGGTTAGCAAAACCAGAGC+AGG + chr8_3:53671540-53671559 None:intergenic 50.0%
! TCCTGTTATGTTGGCTGCAG+AGG - chr8_3:53671914-53671933 Msa1295510:CDS 50.0%
ACCTCTGCAGCCAACATAAC+AGG + chr8_3:53671918-53671937 None:intergenic 50.0%
TCCATTTGGACCCCACTTAG+TGG - chr8_3:53672275-53672294 Msa1295510:CDS 50.0%
CCATTTGGACCCCACTTAGT+GGG - chr8_3:53672276-53672295 Msa1295510:CDS 50.0%
CCTCTTCTTCAGCAGAATCC+AGG + chr8_3:53672423-53672442 None:intergenic 50.0%
CCTGGATTCTGCTGAAGAAG+AGG - chr8_3:53672420-53672439 Msa1295510:CDS 50.0%
GATTCTGCTGAAGAAGAGGC+TGG - chr8_3:53672424-53672443 Msa1295510:CDS 50.0%
CTGTGGTTGAAGGACCTTGT+TGG + chr8_3:53672471-53672490 None:intergenic 50.0%
AAACACGGGAGAACAAGAGG+AGG - chr8_3:53672690-53672709 Msa1295510:CDS 50.0%
TGCGACTCTAATCAACTCGC+TGG + chr8_3:53672830-53672849 None:intergenic 50.0%
GTTGATTAGAGTCGCACCTC+CGG - chr8_3:53672834-53672853 Msa1295510:intron 50.0%
GAGAAACATACGAGCGGATG+TGG - chr8_3:53672917-53672936 Msa1295510:intron 50.0%
TCCGCTTGCCTACTTGGATT+AGG + chr8_3:53673078-53673097 None:intergenic 50.0%
ATGTCTTCCGCTTGCCTACT+TGG + chr8_3:53673084-53673103 None:intergenic 50.0%
AAGCGGAAGACATTCGCTCA+TGG - chr8_3:53673091-53673110 Msa1295510:intron 50.0%
AGCGGAAGACATTCGCTCAT+GGG - chr8_3:53673092-53673111 Msa1295510:intron 50.0%
!! ACGACTAGCCTTCACAAGTG+AGG + chr8_3:53673232-53673251 None:intergenic 50.0%
! TCACTTGTGAAGGCTAGTCG+TGG - chr8_3:53673231-53673250 Msa1295510:CDS 50.0%
CATGACACAAAAGCTCTGCG+AGG - chr8_3:53673495-53673514 Msa1295510:intron 50.0%
AGGTTAGTGAACGCACGTTC+TGG - chr8_3:53674008-53674027 Msa1295510:intron 50.0%
CTCCTCGAGACTGAAGCAAT+TGG - chr8_3:53674322-53674341 Msa1295510:intron 50.0%
CTCCAATTGCTTCAGTCTCG+AGG + chr8_3:53674327-53674346 None:intergenic 50.0%
GTTCGTACATCGTGTCTCTC+GGG - chr8_3:53674515-53674534 Msa1295510:intron 50.0%
GTCCAGCACAGACGAAGAAA+AGG - chr8_3:53674687-53674706 Msa1295510:intron 50.0%
TTAAGGGATGTCGAGAGCGA+AGG - chr8_3:53674862-53674881 Msa1295510:intron 50.0%
! TAAGGGACATTCCGGATTGG+TGG - chr8_3:53675046-53675065 Msa1295510:five_prime_UTR 50.0%
TCAGCTCAGTGCCTAACCTA+AGG + chr8_3:53675411-53675430 None:intergenic 50.0%
!! CGATGGGAATTTTGGAGGGC+AGG - chr8_3:53670747-53670766 Msa1295510:CDS 55.0%
! GGGCAGGGTTATGGAGTACT+AGG - chr8_3:53670763-53670782 Msa1295510:CDS 55.0%
TCTGTTTGGGAGGGGAGGAT+AGG + chr8_3:53670892-53670911 None:intergenic 55.0%
GGACGTGCTTCCTCTATCTG+CGG + chr8_3:53671498-53671517 None:intergenic 55.0%
GGTATTCCTGATGAGGACCG+AGG + chr8_3:53671519-53671538 None:intergenic 55.0%
!!! CGCTGCCTTTTGAGGCTACA+AGG - chr8_3:53672109-53672128 Msa1295510:CDS 55.0%
CCCACTAAGTGGGGTCCAAA+TGG + chr8_3:53672279-53672298 None:intergenic 55.0%
TAGGCGTGTCACCTTTGTCC+TGG - chr8_3:53672402-53672421 Msa1295510:CDS 55.0%
TGCTGAAGAAGAGGCTGGGA+GGG - chr8_3:53672429-53672448 Msa1295510:CDS 55.0%
ATCGGGCACGCATATTCCTC+CGG + chr8_3:53672856-53672875 None:intergenic 55.0%
GACACAAAAGCTCTGCGAGG+TGG - chr8_3:53673498-53673517 Msa1295510:CDS 55.0%
! AGTGAACGCACGTTCTGGAC+AGG - chr8_3:53674013-53674032 Msa1295510:intron 55.0%
CTCTTTGTGCTCTCAACGCG+TGG - chr8_3:53674732-53674751 Msa1295510:intron 55.0%
AAGGGTCTGTTTGGGAGGGG+AGG + chr8_3:53670897-53670916 None:intergenic 60.0%
CTGCTGAAGAAGAGGCTGGG+AGG - chr8_3:53672428-53672447 Msa1295510:CDS 60.0%
GATTAGAGTCGCACCTCCGG+AGG - chr8_3:53672837-53672856 Msa1295510:intron 60.0%
! GCACGTTCTGGACAGGACGT+GGG - chr8_3:53674020-53674039 Msa1295510:intron 60.0%
GCACGTCCTCGGTCCTCATC+AGG - chr8_3:53671510-53671529 Msa1295510:intron 65.0%
GGGCACGCATATTCCTCCGG+AGG + chr8_3:53672853-53672872 None:intergenic 65.0%
! CGCACGTTCTGGACAGGACG+TGG - chr8_3:53674019-53674038 Msa1295510:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 53669618 53675499 53669618 ID=Msa1295510;Name=Msa1295510
chr8_3 mRNA 53669618 53675499 53669618 ID=Msa1295510-mRNA-1;Parent=Msa1295510;Name=Msa1295510-mRNA-1;_AED=0.10;_eAED=0.10;_QI=556|1|1|1|0.8|0.66|6|473|760
chr8_3 exon 53669618 53670844 53669618 ID=Msa1295510-mRNA-1:exon:15421;Parent=Msa1295510-mRNA-1
chr8_3 exon 53671561 53672738 53671561 ID=Msa1295510-mRNA-1:exon:15420;Parent=Msa1295510-mRNA-1
chr8_3 exon 53673182 53673289 53673182 ID=Msa1295510-mRNA-1:exon:15419;Parent=Msa1295510-mRNA-1
chr8_3 exon 53673497 53673682 53673497 ID=Msa1295510-mRNA-1:exon:15418;Parent=Msa1295510-mRNA-1
chr8_3 exon 53673917 53674013 53673917 ID=Msa1295510-mRNA-1:exon:15417;Parent=Msa1295510-mRNA-1
chr8_3 exon 53674984 53675499 53674984 ID=Msa1295510-mRNA-1:exon:15416;Parent=Msa1295510-mRNA-1
chr8_3 five_prime_UTR 53674984 53675499 53674984 ID=Msa1295510-mRNA-1:five_prime_utr;Parent=Msa1295510-mRNA-1
chr8_3 five_prime_UTR 53673974 53674013 53673974 ID=Msa1295510-mRNA-1:five_prime_utr;Parent=Msa1295510-mRNA-1
chr8_3 CDS 53673917 53673973 53673917 ID=Msa1295510-mRNA-1:cds;Parent=Msa1295510-mRNA-1
chr8_3 CDS 53673497 53673682 53673497 ID=Msa1295510-mRNA-1:cds;Parent=Msa1295510-mRNA-1
chr8_3 CDS 53673182 53673289 53673182 ID=Msa1295510-mRNA-1:cds;Parent=Msa1295510-mRNA-1
chr8_3 CDS 53671561 53672738 53671561 ID=Msa1295510-mRNA-1:cds;Parent=Msa1295510-mRNA-1
chr8_3 CDS 53670091 53670844 53670091 ID=Msa1295510-mRNA-1:cds;Parent=Msa1295510-mRNA-1
chr8_3 three_prime_UTR 53669618 53670090 53669618 ID=Msa1295510-mRNA-1:three_prime_utr;Parent=Msa1295510-mRNA-1
Gene Sequence

>Msa1295510

ATGGGAACTGATAGTTGTAAAGTGGCAGAGACATTACCAGATCCCCGCTTTTTTAAGGTACATCGTAGACTCTGCACAGAACTCAAGAAATTAGTTGATAAGGTGTTAAGGATCTTTCCGCAGATAGAGGAAGCACGTCCTCGGTCCTCATCAGGAATACCTGCTCTGGTTTTGCTAACCAGTACAATTGATAAAGCCAAACAACTTCTGCAAAATTGCTCTGATTCTAGTGTACTTTACCTGGCAATAACAGGGGAGTCAATTCTCTCAAAATGCCAAAAGGCAAGAAAGTCATTAGAGAAAAGCTTAGTCCAGATTCAAGATATAGTTCCTGTTATGTTGGCTGCAGAGATTTCTCGAATAGTTGATGATCTTAGGCGTGTCACCTTTGTCCTGGATTCTGCTGAAGAAGAGGCTGGGAGGGTTATGAGAGAATTGCTCCAACAAGGTCCTTCAACCACAGATAACGATTCAAAGGAAAACTCAGACGTAAAATCTCTTCAGTTTGCAGCGGCAAGACTTAATATCACATCCGCAACAAGCATCGTAATAGAGAGAAGATCTATTAAGAAGTTACTACAAAAACTTGGACAAAATGAGGAAACCAAAAAGGTGATCTTGAAAAATCTGTTGTATCTTCTGATAAAGTATGGAAACTTATTAAACACGGGAGAACAAGAGGAGGTCTATTCTTATCGTGAAAAACCTGTAGCGAATGAGAATTCCAGTCATGATTCTTTACGCACCGATAGTGTGAATTCTGAGCCGTATTCAAACCACGATCAGTATGGAATTCGTGCCAGCGAGTTGATTAGAGTCGCACCTCCGGAGGAATATGCGTGCCCGATATCTTTAAGGTTGATGTATGATCCTGTTGTCATTGCTTCAGGAGAAACATACGAGCGGATGTGGATACAGAAATGGTTTGATGAGGGTAATGTTATATGCCCGAAAACTAAAAAGAAATTGCCGCATTTGTCGATGACTCCTAACGTTGCTTTAAAGGAATTAATATCAAAGTGGTGCAAAACTAATGACGTCTCCATTCCTAATCCAAGTAGGCAAGCGGAAGACATTCGCTCATGGGAAGCTTCAGTCACTTCCATTAGGAGTTTCGGAAGTTCCATGAATGGTTTGAACGTGCCAATGGATCTTAGTAACGTATCATTTGGATCGGTAGATAACAGTTATAATTCAGATTCCTCACTTGTGAAGGCTAGTCGTGGCTTAAATTCGATGTTGATCAAGACTAGAAACAGTTCTCGCGGGCATCAATCTCGTTCGCAGATACATGGCTCATATCTGGCATCCTTGTCTGAACTTCATGAGCGTCAATGGGATTCACAGTGCCAAGTAGTCAAAGATATGAAAATAGATTTCAAATGCAATTCCGAAGCTTTTAACTCTGTGTCACCGGATAATTTCATTGACCCAGTTATGAGATTTCTGAGCACTGCATGTGATAAGCATGACACAAAAGCTCTGCGAGGTGGATGTCAATTACTGTTGGAATTTACAAAGTACTGCAGAAATGGTGTGATAAACTTAAGTGAAGATACATGCAGTGTGTTGGCAAGTCTCCTCGAGACTGAAGCAATTGGAGAAGCTCTTGCTATACTGGAAGAATTGTCGAACCATTGGTCCGATAAAGCGAACATTGCAGCTTCCAATGCACTGACTTCTATTTTAAAGATCCTTGATTCTGGTAACCAAGAGTACCAACGGAAAGCTATTAGAATAATGTGCAATTTTTCATCCAATTCTGAATTTTGTTCGTACATCGTGTCTCTCGGGTGCATCCCAAAATTACTACCATTTTTCGAAGACAAGTCCCTTTCAAGAGACTGTATATGCATATTGAAAAACCTTTGTGATACTAAAGATGGTAGGGTATCTGTTGTTGAAACTAAGGGATGCATGTCTTGTGTTGTTGAAATACTTGGGTCCAGCACAGACGAAGAAAAGGAATTTGCACTGGCGATTGTACTCTCTTTGTGCTCTCAACGCGTGGAATATTGTGAGTTGGTTATGGAGGAGGGTATTATACCGTATCTTGTCAATATCTCCAATGTGGGAAACGATAGCACAAAGGTGTATGCATTGGAACTGCTCCGACTTTTAAGGGATGTCGAGAGCGAAGGTTGCTTTGAGCAGAATCTCAACAAATCTAGAGATTCCAACGATCAATATGAAGAAAAGAAATCGTCAAAGAAATCCACATTTTTGAACAAGCTATCACGGTTCGGAAAATCAAGTTCAATTTCATCAAAAAACAAGAGATAA
Protein sequence

>Msa1295510

MGTDSCKVAETLPDPRFFKVHRRLCTELKKLVDKVLRIFPQIEEARPRSSSGIPALVLLTSTIDKAKQLLQNCSDSSVLYLAITGESILSKCQKARKSLEKSLVQIQDIVPVMLAAEISRIVDDLRRVTFVLDSAEEEAGRVMRELLQQGPSTTDNDSKENSDVKSLQFAAARLNITSATSIVIERRSIKKLLQKLGQNEETKKVILKNLLYLLIKYGNLLNTGEQEEVYSYREKPVANENSSHDSLRTDSVNSEPYSNHDQYGIRASELIRVAPPEEYACPISLRLMYDPVVIASGETYERMWIQKWFDEGNVICPKTKKKLPHLSMTPNVALKELISKWCKTNDVSIPNPSRQAEDIRSWEASVTSIRSFGSSMNGLNVPMDLSNVSFGSVDNSYNSDSSLVKASRGLNSMLIKTRNSSRGHQSRSQIHGSYLASLSELHERQWDSQCQVVKDMKIDFKCNSEAFNSVSPDNFIDPVMRFLSTACDKHDTKALRGGCQLLLEFTKYCRNGVINLSEDTCSVLASLLETEAIGEALAILEELSNHWSDKANIAASNALTSILKILDSGNQEYQRKAIRIMCNFSSNSEFCSYIVSLGCIPKLLPFFEDKSLSRDCICILKNLCDTKDGRVSVVETKGCMSCVVEILGSSTDEEKEFALAIVLSLCSQRVEYCELVMEEGIIPYLVNISNVGNDSTKVYALELLRLLRDVESEGCFEQNLNKSRDSNDQYEEKKSSKKSTFLNKLSRFGKSSSISSKNKR*