Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355520 | XP_003597439.1 | 95.759 | 448 | 16 | 2 | 1 | 448 | 1 | 445 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355520 | G7IUC5 | 95.759 | 448 | 16 | 2 | 1 | 448 | 1 | 445 | 0.0 | 884 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1355520 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017320 | Msa1355520 | 0.813264 | 2.794951e-51 | -8.615850e-47 |
| Msa0055070 | Msa1355520 | 0.809736 | 1.633056e-50 | -8.615850e-47 |
| Msa0101020 | Msa1355520 | 0.811191 | 7.922095e-51 | -8.615850e-47 |
| Msa0111080 | Msa1355520 | 0.812651 | 3.808756e-51 | -8.615850e-47 |
| Msa1355520 | Msa1396940 | 0.817134 | 3.860772e-52 | -8.615850e-47 |
| Msa0679550 | Msa1355520 | 0.802285 | 6.031722e-49 | -8.615850e-47 |
| Msa0773590 | Msa1355520 | 0.808060 | 3.728928e-50 | -8.615850e-47 |
| Msa0811040 | Msa1355520 | 0.803938 | 2.744780e-49 | -8.615850e-47 |
| Msa0142500 | Msa1355520 | 0.811133 | 8.151554e-51 | -8.615850e-47 |
| Msa0145110 | Msa1355520 | 0.810757 | 9.836829e-51 | -8.615850e-47 |
| Msa0154920 | Msa1355520 | 0.812116 | 4.985375e-51 | -8.615850e-47 |
| Msa1250110 | Msa1355520 | 0.801902 | 7.232828e-49 | -8.615850e-47 |
| Msa1317270 | Msa1355520 | 0.813218 | 2.860279e-51 | -8.615850e-47 |
| Msa0439890 | Msa1355520 | 0.807261 | 5.510015e-50 | -8.615850e-47 |
| Msa0443430 | Msa1355520 | 0.808807 | 2.583029e-50 | -8.615850e-47 |
| Msa1036740 | Msa1355520 | 0.800768 | 1.234428e-48 | -8.615850e-47 |
| Msa0264690 | Msa1355520 | 0.833727 | 4.515610e-56 | -8.615850e-47 |
| Msa1163540 | Msa1355520 | 0.803841 | 2.874811e-49 | -8.615850e-47 |
| Msa0489660 | Msa1355520 | 0.802980 | 4.336022e-49 | -8.615850e-47 |
| Msa0514610 | Msa1355520 | 0.807323 | 5.346248e-50 | -8.615850e-47 |
| Msa0527910 | Msa1355520 | 0.802627 | 5.129767e-49 | -8.615850e-47 |
| Msa0870650 | Msa1355520 | 0.822129 | 2.793929e-53 | -8.615850e-47 |
| Msa0905750 | Msa1355520 | 0.811491 | 6.818293e-51 | -8.615850e-47 |
| Msa0965020 | Msa1355520 | 0.811615 | 6.406148e-51 | -8.615850e-47 |
| Msa0973320 | Msa1355520 | 0.807709 | 4.427008e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355520 | MtrunA17_Chr2g0328901 | 95.759 | 448 | 16 | 2 | 1 | 448 | 1 | 445 | 0.0 | 884 |
| Msa1355520 | MtrunA17_Chr1g0201951 | 47.222 | 360 | 163 | 8 | 85 | 419 | 92 | 449 | 6.36e-95 | 293 |
| Msa1355520 | MtrunA17_Chr6g0463911 | 46.154 | 338 | 155 | 4 | 103 | 414 | 105 | 441 | 1.63e-82 | 261 |
| Msa1355520 | MtrunA17_Chr7g0265561 | 46.748 | 246 | 106 | 7 | 4 | 243 | 3 | 229 | 9.82e-60 | 202 |
| Msa1355520 | MtrunA17_Chr1g0179561 | 60.248 | 161 | 58 | 3 | 84 | 243 | 94 | 249 | 1.07e-55 | 192 |
| Msa1355520 | MtrunA17_Chr1g0179561 | 40.541 | 111 | 62 | 1 | 310 | 416 | 371 | 481 | 6.04e-23 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1355520 | AT1G21200.1 | 39.574 | 470 | 206 | 12 | 1 | 419 | 1 | 443 | 2.18e-88 | 276 |
| Msa1355520 | AT1G21200.2 | 39.574 | 470 | 206 | 12 | 1 | 419 | 1 | 443 | 2.18e-88 | 276 |
| Msa1355520 | AT1G76870.2 | 42.941 | 340 | 162 | 10 | 84 | 412 | 60 | 378 | 2.14e-71 | 231 |
| Msa1355520 | AT1G76870.1 | 42.941 | 340 | 162 | 10 | 84 | 412 | 60 | 378 | 2.14e-71 | 231 |
| Msa1355520 | AT1G76870.3 | 42.941 | 340 | 162 | 10 | 84 | 412 | 60 | 378 | 2.14e-71 | 231 |
| Msa1355520 | AT3G10040.1 | 34.452 | 447 | 242 | 8 | 11 | 430 | 6 | 428 | 6.31e-66 | 218 |
Find 116 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGATAATAATAATCAAAT+TGG | 0.250764 | tig0014834:-12442 | Msa1355520:CDS |
| TCAATTATGAATGGTTCTTC+TGG | 0.281471 | tig0014834:-12598 | None:intergenic |
| GGTTCTTCTGGTTTGGGTGG+TGG | 0.300179 | tig0014834:-12586 | Msa1355520:CDS |
| TATGAATGGTTCTTCTGGTT+TGG | 0.302937 | tig0014834:-12593 | Msa1355520:CDS |
| CAAGTCAAGATCATGACTAT+TGG | 0.311830 | tig0014834:+11850 | None:intergenic |
| ATGAATGGTTCTTCTGGTTT+GGG | 0.316755 | tig0014834:-12592 | Msa1355520:CDS |
| TTCTCCCACGGAGACTTTGC+AGG | 0.318216 | tig0014834:+11578 | None:intergenic |
| GTTCTTCTGGTTTGGGTGGT+GGG | 0.328898 | tig0014834:-12585 | Msa1355520:CDS |
| ACCAATGGAGGTAGGGTCTA+AGG | 0.337698 | tig0014834:+11319 | None:intergenic |
| GTGAGGAGGATGGCCACTTT+TGG | 0.369260 | tig0014834:-11658 | Msa1355520:CDS |
| GGAGAAAAGAGAGTGGATTA+AGG | 0.381772 | tig0014834:-11561 | Msa1355520:CDS |
| TATGAATATGATAACTGGTT+TGG | 0.383314 | tig0014834:-12470 | Msa1355520:CDS |
| GGATAGGGAGCTGGAGAAGC+TGG | 0.386271 | tig0014834:-11438 | Msa1355520:CDS |
| CAACATATGAATATGATAAC+TGG | 0.387205 | tig0014834:-12475 | Msa1355520:CDS |
| TCCTGCATTGATGGATTCAA+TGG | 0.411710 | tig0014834:-11975 | Msa1355520:CDS |
| ACCTTGAATCTCCATTTCAT+AGG | 0.413613 | tig0014834:-12531 | Msa1355520:CDS |
| GAGGATGATGAGTTGGATAA+TGG | 0.423042 | tig0014834:-11746 | Msa1355520:CDS |
| AAGTCAAGATCATGACTATT+GGG | 0.423237 | tig0014834:+11851 | None:intergenic |
| GAAGTTCAAAAGCCCTGGCT+TGG | 0.432989 | tig0014834:+11501 | None:intergenic |
| GAGCATGGTTACGGAGAAGA+TGG | 0.435266 | tig0014834:-12328 | Msa1355520:CDS |
| GATGGTGTTAAGAAGAAATC+CGG | 0.439201 | tig0014834:-12166 | Msa1355520:CDS |
| ATCCGGGGTGTCACAGAAGA+AGG | 0.448557 | tig0014834:-12149 | Msa1355520:CDS |
| TGGTAGGGGAACTTGTTGTC+AGG | 0.449451 | tig0014834:-12008 | Msa1355520:CDS |
| GAAGACGATGAGCATGGTTA+CGG | 0.454149 | tig0014834:-12337 | Msa1355520:CDS |
| GTGAGTTGTGTTGGTGATGA+TGG | 0.455421 | tig0014834:-12205 | Msa1355520:CDS |
| GAAGAAACTTGAGAGTGAAA+TGG | 0.458951 | tig0014834:-11618 | Msa1355520:CDS |
| GGTTGAGAATCCTGCATTGA+TGG | 0.463782 | tig0014834:-11984 | Msa1355520:CDS |
| GATACCGCAGCAAGAAGGAT+AGG | 0.473004 | tig0014834:-11454 | Msa1355520:CDS |
| TGACTTGCATAGTTATTCGT+TGG | 0.479428 | tig0014834:-11834 | Msa1355520:CDS |
| TTCAGAAACAGCGGTTTAAG+TGG | 0.489001 | tig0014834:-11481 | Msa1355520:CDS |
| ACCATTGAATCCATCAATGC+AGG | 0.492133 | tig0014834:+11974 | None:intergenic |
| AATATTAATGCACGTGGTGA+TGG | 0.497668 | tig0014834:-11719 | Msa1355520:CDS |
| GGTGATGGAGGGAGAATGGA+AGG | 0.501886 | tig0014834:-11704 | Msa1355520:CDS |
| TCTAAGATAATGATAAGTAA+AGG | 0.502250 | tig0014834:-12109 | Msa1355520:CDS |
| AATTGTGTTTCAATTATGAA+TGG | 0.507262 | tig0014834:-12607 | None:intergenic |
| AAAGCTGAAGCAGAGAGATC+AGG | 0.507837 | tig0014834:-11369 | Msa1355520:CDS |
| TTGTGGCCTCTTGATACCAA+TGG | 0.514883 | tig0014834:+11304 | None:intergenic |
| TCTCCCACGGAGACTTTGCA+GGG | 0.516340 | tig0014834:+11579 | None:intergenic |
| AATGGTTCTTCTGGTTTGGG+TGG | 0.516998 | tig0014834:-12589 | Msa1355520:CDS |
| TCCTTAGACCCTACCTCCAT+TGG | 0.518261 | tig0014834:-11320 | Msa1355520:CDS |
| GGTTGAATGAGATGCTTGGT+AGG | 0.519981 | tig0014834:-12024 | Msa1355520:CDS |
| TGTTGTTGATGCCTATGAAA+TGG | 0.522650 | tig0014834:+12520 | None:intergenic |
| CATAGTTATTCGTTGGAACA+CGG | 0.524019 | tig0014834:-11827 | Msa1355520:CDS |
| AAAATGTTGACTTCCAAGCC+AGG | 0.526284 | tig0014834:-11514 | Msa1355520:CDS |
| CACTAGACTGCGGCCAAAAG+TGG | 0.527780 | tig0014834:+11645 | None:intergenic |
| AATGGTTAACTTGTCTGCTA+AGG | 0.528317 | tig0014834:-11957 | Msa1355520:CDS |
| TTTCTGAAGTTCAAAAGCCC+TGG | 0.531742 | tig0014834:+11496 | None:intergenic |
| GGTGATGATGGAACAATTAG+TGG | 0.532799 | tig0014834:-12193 | Msa1355520:CDS |
| TGCAATTTGAAAATGAGCAC+AGG | 0.532921 | tig0014834:-11397 | Msa1355520:CDS |
| GCCTATGAAATGGAGATTCA+AGG | 0.537095 | tig0014834:+12530 | None:intergenic |
| CAGCAAGAAGGATAGGGAGC+TGG | 0.539921 | tig0014834:-11447 | Msa1355520:CDS |
| TGGGTATCCTTTGACCATTG+TGG | 0.541818 | tig0014834:+11870 | None:intergenic |
| ATTAATGCACGTGGTGATGG+AGG | 0.542789 | tig0014834:-11716 | Msa1355520:CDS |
| TGAAGATAACAATGAAAGTG+AGG | 0.549731 | tig0014834:-11765 | Msa1355520:CDS |
| ATAGCAGTGGTGAGTTGTGT+TGG | 0.551265 | tig0014834:-12214 | Msa1355520:CDS |
| TAGGGGAACTTGTTGTCAGG+TGG | 0.556404 | tig0014834:-12005 | Msa1355520:CDS |
| TGAAAGTGAGGATGATGAGT+TGG | 0.557152 | tig0014834:-11753 | Msa1355520:CDS |
| AACTTGAGAGTGAAATGGCA+AGG | 0.557312 | tig0014834:-11613 | Msa1355520:CDS |
| GTTGAATGAGATGCTTGGTA+GGG | 0.559093 | tig0014834:-12023 | Msa1355520:CDS |
| TATCAAGAGGCCACAAGGGA+GGG | 0.560647 | tig0014834:-11297 | Msa1355520:CDS |
| ATACCGCAGCAAGAAGGATA+GGG | 0.564239 | tig0014834:-11453 | Msa1355520:CDS |
| TTGATATGTTCCCTCCCTTG+TGG | 0.565958 | tig0014834:+11287 | None:intergenic |
| GTCCACTTCATTCTCTGCCA+AGG | 0.566514 | tig0014834:+12259 | None:intergenic |
| ACTTGAATAAGAGATATAAG+AGG | 0.568508 | tig0014834:-12045 | Msa1355520:CDS |
| TGTCACAGAAGAAGGGTAAG+TGG | 0.569426 | tig0014834:-12141 | Msa1355520:CDS |
| TCTTGATACCAATGGAGGTA+GGG | 0.573392 | tig0014834:+11312 | None:intergenic |
| GGAGCTGGAGAAGCTGGCGA+TGG | 0.574129 | tig0014834:-11432 | Msa1355520:CDS |
| AAGAGGTTGAATGAGATGCT+TGG | 0.576189 | tig0014834:-12028 | Msa1355520:CDS |
| ATCAGGAGGCAGAGTTCAGT+AGG | 0.578594 | tig0014834:-11352 | Msa1355520:CDS |
| CAACAGACTCAGTTAGCTCA+TGG | 0.578956 | tig0014834:-12502 | Msa1355520:CDS |
| ATGGTGTTAAGAAGAAATCC+GGG | 0.579854 | tig0014834:-12165 | Msa1355520:CDS |
| CTCTTGATACCAATGGAGGT+AGG | 0.581041 | tig0014834:+11311 | None:intergenic |
| TTGAATGAGATGCTTGGTAG+GGG | 0.587060 | tig0014834:-12022 | Msa1355520:CDS |
| TAGAAATAAATTAAGTGAGG+AGG | 0.587853 | tig0014834:-11672 | Msa1355520:CDS |
| ACGTGGTGATGGAGGGAGAA+TGG | 0.588300 | tig0014834:-11708 | Msa1355520:CDS |
| ACCCTTCTTCTGTGACACCC+CGG | 0.588573 | tig0014834:+12147 | None:intergenic |
| TGATAGAAATAAATTAAGTG+AGG | 0.588915 | tig0014834:-11675 | Msa1355520:CDS |
| GTTAAGATACCGCAGCAAGA+AGG | 0.589509 | tig0014834:-11459 | Msa1355520:CDS |
| TTAATGCACGTGGTGATGGA+GGG | 0.592885 | tig0014834:-11715 | Msa1355520:CDS |
| AAATGTTGACTTCCAAGCCA+GGG | 0.593930 | tig0014834:-11513 | Msa1355520:CDS |
| TAACTTGTCTGCTAAGGCGA+AGG | 0.599282 | tig0014834:-11951 | Msa1355520:CDS |
| ATAGTTATTCGTTGGAACAC+GGG | 0.600371 | tig0014834:-11826 | Msa1355520:CDS |
| TTATTCGTTGGAACACGGGA+AGG | 0.601197 | tig0014834:-11822 | Msa1355520:CDS |
| GTGCATACCACAATGGTCAA+AGG | 0.603169 | tig0014834:-11877 | Msa1355520:CDS |
| TGATGGAACAATTAGTGGTG+TGG | 0.604354 | tig0014834:-12188 | Msa1355520:CDS |
| ACTTGAGAGTGAAATGGCAA+GGG | 0.606060 | tig0014834:-11612 | Msa1355520:CDS |
| AGTGGACGGATAATGTGGTT+GGG | 0.610749 | tig0014834:-12243 | Msa1355520:CDS |
| AAGTGGACGGATAATGTGGT+TGG | 0.613391 | tig0014834:-12244 | Msa1355520:CDS |
| GTATCAAGAGGCCACAAGGG+AGG | 0.615865 | tig0014834:-11298 | Msa1355520:CDS |
| AACTTATCCTCACACTGCTG+CGG | 0.618536 | tig0014834:+12073 | None:intergenic |
| CTACCTCCATTGGTATCAAG+AGG | 0.620308 | tig0014834:-11310 | Msa1355520:CDS |
| AGCATGGTTACGGAGAAGAT+GGG | 0.623013 | tig0014834:-12327 | Msa1355520:CDS |
| AGACCCTGCAAAGTCTCCGT+GGG | 0.624160 | tig0014834:-11582 | Msa1355520:CDS |
| GGAACAATTAGTGGTGTGGA+TGG | 0.625621 | tig0014834:-12184 | Msa1355520:CDS |
| AATAAATTAAGTGAGGAGGA+TGG | 0.626359 | tig0014834:-11668 | Msa1355520:CDS |
| AATGAAGTGGACGGATAATG+TGG | 0.631463 | tig0014834:-12248 | Msa1355520:CDS |
| AGGGAGGGAACATATCAACT+TGG | 0.631664 | tig0014834:-11282 | Msa1355520:CDS |
| CTCCTTGGCAGAGAATGAAG+TGG | 0.631774 | tig0014834:-12261 | Msa1355520:CDS |
| TGTGTCGCCGCAGCAGTGTG+AGG | 0.632288 | tig0014834:-12080 | Msa1355520:CDS |
| GCTCCCTATCCTTCTTGCTG+CGG | 0.632768 | tig0014834:+11450 | None:intergenic |
| GGTTGGGCTTCTTATAGCAG+TGG | 0.632989 | tig0014834:-12227 | Msa1355520:CDS |
| ATTGGTATCAAGAGGCCACA+AGG | 0.633070 | tig0014834:-11302 | Msa1355520:CDS |
| TTCTTCATCCCACTAGACTG+CGG | 0.642211 | tig0014834:+11635 | None:intergenic |
| ATGAGCGAAGACGATGAGCA+TGG | 0.644222 | tig0014834:-12343 | Msa1355520:CDS |
| GCTGAAGCAGAGAGATCAGG+AGG | 0.645485 | tig0014834:-11366 | Msa1355520:CDS |
| TTGGCAGAGAATGAAGTGGA+CGG | 0.645694 | tig0014834:-12257 | Msa1355520:CDS |
| CTCCGTGGGAGAAAAGAGAG+TGG | 0.647688 | tig0014834:-11568 | Msa1355520:CDS |
| AAGACCCTGCAAAGTCTCCG+TGG | 0.649124 | tig0014834:-11583 | Msa1355520:CDS |
| TGGCCTCTTGATACCAATGG+AGG | 0.649145 | tig0014834:+11307 | None:intergenic |
| GTGATGGAGGGAGAATGGAA+GGG | 0.653559 | tig0014834:-11703 | Msa1355520:CDS |
| TCCGGGGTGTCACAGAAGAA+GGG | 0.653871 | tig0014834:-12148 | Msa1355520:CDS |
| TTGGTATCAAGAGGCCACAA+GGG | 0.674612 | tig0014834:-11301 | Msa1355520:CDS |
| GAAATGTGTGCATACCACAA+TGG | 0.676978 | tig0014834:-11884 | Msa1355520:CDS |
| GGAATTAATATTAATGCACG+TGG | 0.680730 | tig0014834:-11725 | Msa1355520:CDS |
| TGGTGTTAAGAAGAAATCCG+GGG | 0.737936 | tig0014834:-12164 | Msa1355520:CDS |
| AAGGACTCAAGAGATCACGA+TGG | 0.786747 | tig0014834:-11803 | Msa1355520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATGATAATAATAATCAAAT+TGG | - | tig0014834:11418-11437 | Msa1355520:CDS | 15.0% |
| !!! | AAAAATTTGAATTTTGGTAA+AGG | - | tig0014834:11454-11473 | Msa1355520:CDS | 15.0% |
| !! | GATGATAATAATAATCAAAT+TGG | - | tig0014834:11418-11437 | Msa1355520:CDS | 15.0% |
| !!! | AAAAATTTGAATTTTGGTAA+AGG | - | tig0014834:11454-11473 | Msa1355520:CDS | 15.0% |
| !!! | GAAGTGAAAAATTTGAATTT+TGG | - | tig0014834:11448-11467 | Msa1355520:CDS | 20.0% |
| !!! | TCTAAGATAATGATAAGTAA+AGG | - | tig0014834:11751-11770 | Msa1355520:CDS | 20.0% |
| !! | TGATAGAAATAAATTAAGTG+AGG | - | tig0014834:12185-12204 | Msa1355520:CDS | 20.0% |
| !!! | GAAGTGAAAAATTTGAATTT+TGG | - | tig0014834:11448-11467 | Msa1355520:CDS | 20.0% |
| !!! | TCTAAGATAATGATAAGTAA+AGG | - | tig0014834:11751-11770 | Msa1355520:CDS | 20.0% |
| !! | TGATAGAAATAAATTAAGTG+AGG | - | tig0014834:12185-12204 | Msa1355520:CDS | 20.0% |
| ! | CAACATATGAATATGATAAC+TGG | - | tig0014834:11385-11404 | Msa1355520:CDS | 25.0% |
| ! | TATGAATATGATAACTGGTT+TGG | - | tig0014834:11390-11409 | Msa1355520:CDS | 25.0% |
| !!! | TTTGAATTTTGGTAAAGGAA+AGG | - | tig0014834:11459-11478 | Msa1355520:CDS | 25.0% |
| !!! | TTGAATTTTGGTAAAGGAAA+GGG | - | tig0014834:11460-11479 | Msa1355520:CDS | 25.0% |
| ! | ACTTGAATAAGAGATATAAG+AGG | - | tig0014834:11815-11834 | Msa1355520:CDS | 25.0% |
| ! | TAGAAATAAATTAAGTGAGG+AGG | - | tig0014834:12188-12207 | Msa1355520:CDS | 25.0% |
| ! | CAACATATGAATATGATAAC+TGG | - | tig0014834:11385-11404 | Msa1355520:CDS | 25.0% |
| ! | TATGAATATGATAACTGGTT+TGG | - | tig0014834:11390-11409 | Msa1355520:CDS | 25.0% |
| !!! | TTTGAATTTTGGTAAAGGAA+AGG | - | tig0014834:11459-11478 | Msa1355520:CDS | 25.0% |
| !!! | TTGAATTTTGGTAAAGGAAA+GGG | - | tig0014834:11460-11479 | Msa1355520:CDS | 25.0% |
| ! | ACTTGAATAAGAGATATAAG+AGG | - | tig0014834:11815-11834 | Msa1355520:CDS | 25.0% |
| ! | TAGAAATAAATTAAGTGAGG+AGG | - | tig0014834:12188-12207 | Msa1355520:CDS | 25.0% |
| !!! | AATTGCGAGAATTTTTTCGA+TGG | - | tig0014834:11556-11575 | Msa1355520:CDS | 30.0% |
| AAGTCAAGATCATGACTATT+GGG | + | tig0014834:12012-12031 | None:intergenic | 30.0% | |
| TGAAGATAACAATGAAAGTG+AGG | - | tig0014834:12095-12114 | Msa1355520:CDS | 30.0% | |
| GGAATTAATATTAATGCACG+TGG | - | tig0014834:12135-12154 | Msa1355520:CDS | 30.0% | |
| AATAAATTAAGTGAGGAGGA+TGG | - | tig0014834:12192-12211 | Msa1355520:CDS | 30.0% | |
| !!! | AATTGCGAGAATTTTTTCGA+TGG | - | tig0014834:11556-11575 | Msa1355520:CDS | 30.0% |
| AAGTCAAGATCATGACTATT+GGG | + | tig0014834:12012-12031 | None:intergenic | 30.0% | |
| TGAAGATAACAATGAAAGTG+AGG | - | tig0014834:12095-12114 | Msa1355520:CDS | 30.0% | |
| GGAATTAATATTAATGCACG+TGG | - | tig0014834:12135-12154 | Msa1355520:CDS | 30.0% | |
| AATAAATTAAGTGAGGAGGA+TGG | - | tig0014834:12192-12211 | Msa1355520:CDS | 30.0% | |
| !! | ATGAATGGTTCTTCTGGTTT+GGG | - | tig0014834:11268-11287 | Msa1355520:CDS | 35.0% |
| ACCTTGAATCTCCATTTCAT+AGG | - | tig0014834:11329-11348 | Msa1355520:CDS | 35.0% | |
| TGTTGTTGATGCCTATGAAA+TGG | + | tig0014834:11343-11362 | None:intergenic | 35.0% | |
| !!! | AATTTTTTCGATGGTGGGAA+GGG | - | tig0014834:11565-11584 | Msa1355520:CDS | 35.0% |
| ! | GATGGTGTTAAGAAGAAATC+CGG | - | tig0014834:11694-11713 | Msa1355520:CDS | 35.0% |
| ! | ATGGTGTTAAGAAGAAATCC+GGG | - | tig0014834:11695-11714 | Msa1355520:CDS | 35.0% |
| !! | AATGGTTAACTTGTCTGCTA+AGG | - | tig0014834:11903-11922 | Msa1355520:CDS | 35.0% |
| CAAGTCAAGATCATGACTAT+TGG | + | tig0014834:12013-12032 | None:intergenic | 35.0% | |
| ! | TGACTTGCATAGTTATTCGT+TGG | - | tig0014834:12026-12045 | Msa1355520:CDS | 35.0% |
| CATAGTTATTCGTTGGAACA+CGG | - | tig0014834:12033-12052 | Msa1355520:CDS | 35.0% | |
| ATAGTTATTCGTTGGAACAC+GGG | - | tig0014834:12034-12053 | Msa1355520:CDS | 35.0% | |
| AATATTAATGCACGTGGTGA+TGG | - | tig0014834:12141-12160 | Msa1355520:CDS | 35.0% | |
| GAAGAAACTTGAGAGTGAAA+TGG | - | tig0014834:12242-12261 | Msa1355520:CDS | 35.0% | |
| ! | CTTTTGAACTTCAGAAACAG+CGG | - | tig0014834:12370-12389 | Msa1355520:CDS | 35.0% |
| TGCAATTTGAAAATGAGCAC+AGG | - | tig0014834:12463-12482 | Msa1355520:CDS | 35.0% | |
| !! | ATGAATGGTTCTTCTGGTTT+GGG | - | tig0014834:11268-11287 | Msa1355520:CDS | 35.0% |
| ACCTTGAATCTCCATTTCAT+AGG | - | tig0014834:11329-11348 | Msa1355520:CDS | 35.0% | |
| TGTTGTTGATGCCTATGAAA+TGG | + | tig0014834:11343-11362 | None:intergenic | 35.0% | |
| !!! | AATTTTTTCGATGGTGGGAA+GGG | - | tig0014834:11565-11584 | Msa1355520:CDS | 35.0% |
| ! | GATGGTGTTAAGAAGAAATC+CGG | - | tig0014834:11694-11713 | Msa1355520:CDS | 35.0% |
| ! | ATGGTGTTAAGAAGAAATCC+GGG | - | tig0014834:11695-11714 | Msa1355520:CDS | 35.0% |
| !! | AATGGTTAACTTGTCTGCTA+AGG | - | tig0014834:11903-11922 | Msa1355520:CDS | 35.0% |
| CAAGTCAAGATCATGACTAT+TGG | + | tig0014834:12013-12032 | None:intergenic | 35.0% | |
| ! | TGACTTGCATAGTTATTCGT+TGG | - | tig0014834:12026-12045 | Msa1355520:CDS | 35.0% |
| CATAGTTATTCGTTGGAACA+CGG | - | tig0014834:12033-12052 | Msa1355520:CDS | 35.0% | |
| ATAGTTATTCGTTGGAACAC+GGG | - | tig0014834:12034-12053 | Msa1355520:CDS | 35.0% | |
| AATATTAATGCACGTGGTGA+TGG | - | tig0014834:12141-12160 | Msa1355520:CDS | 35.0% | |
| GAAGAAACTTGAGAGTGAAA+TGG | - | tig0014834:12242-12261 | Msa1355520:CDS | 35.0% | |
| ! | CTTTTGAACTTCAGAAACAG+CGG | - | tig0014834:12370-12389 | Msa1355520:CDS | 35.0% |
| TGCAATTTGAAAATGAGCAC+AGG | - | tig0014834:12463-12482 | Msa1355520:CDS | 35.0% | |
| GCCTATGAAATGGAGATTCA+AGG | + | tig0014834:11333-11352 | None:intergenic | 40.0% | |
| !!! | TGCGAGAATTTTTTCGATGG+TGG | - | tig0014834:11559-11578 | Msa1355520:CDS | 40.0% |
| !!! | GCGAGAATTTTTTCGATGGT+GGG | - | tig0014834:11560-11579 | Msa1355520:CDS | 40.0% |
| !!! | GAATTTTTTCGATGGTGGGA+AGG | - | tig0014834:11564-11583 | Msa1355520:CDS | 40.0% |
| !!! | ATTTTTTCGATGGTGGGAAG+GGG | - | tig0014834:11566-11585 | Msa1355520:CDS | 40.0% |
| AATGAAGTGGACGGATAATG+TGG | - | tig0014834:11612-11631 | Msa1355520:CDS | 40.0% | |
| !! | GGTGATGATGGAACAATTAG+TGG | - | tig0014834:11667-11686 | Msa1355520:CDS | 40.0% |
| TGATGGAACAATTAGTGGTG+TGG | - | tig0014834:11672-11691 | Msa1355520:CDS | 40.0% | |
| ! | TGGTGTTAAGAAGAAATCCG+GGG | - | tig0014834:11696-11715 | Msa1355520:CDS | 40.0% |
| AAGAGGTTGAATGAGATGCT+TGG | - | tig0014834:11832-11851 | Msa1355520:CDS | 40.0% | |
| GTTGAATGAGATGCTTGGTA+GGG | - | tig0014834:11837-11856 | Msa1355520:CDS | 40.0% | |
| TTGAATGAGATGCTTGGTAG+GGG | - | tig0014834:11838-11857 | Msa1355520:CDS | 40.0% | |
| !! | TCCTGCATTGATGGATTCAA+TGG | - | tig0014834:11885-11904 | Msa1355520:CDS | 40.0% |
| ACCATTGAATCCATCAATGC+AGG | + | tig0014834:11889-11908 | None:intergenic | 40.0% | |
| GAAATGTGTGCATACCACAA+TGG | - | tig0014834:11976-11995 | Msa1355520:CDS | 40.0% | |
| TGAAAGTGAGGATGATGAGT+TGG | - | tig0014834:12107-12126 | Msa1355520:CDS | 40.0% | |
| ! | GAGGATGATGAGTTGGATAA+TGG | - | tig0014834:12114-12133 | Msa1355520:CDS | 40.0% |
| AACTTGAGAGTGAAATGGCA+AGG | - | tig0014834:12247-12266 | Msa1355520:CDS | 40.0% | |
| ACTTGAGAGTGAAATGGCAA+GGG | - | tig0014834:12248-12267 | Msa1355520:CDS | 40.0% | |
| !! | GGAGAAAAGAGAGTGGATTA+AGG | - | tig0014834:12299-12318 | Msa1355520:CDS | 40.0% |
| ! | GGAAGTCAACATTTTGCTCT+TGG | + | tig0014834:12341-12360 | None:intergenic | 40.0% |
| !! | AAAATGTTGACTTCCAAGCC+AGG | - | tig0014834:12346-12365 | Msa1355520:CDS | 40.0% |
| !! | AAATGTTGACTTCCAAGCCA+GGG | - | tig0014834:12347-12366 | Msa1355520:CDS | 40.0% |
| !! | TTTCTGAAGTTCAAAAGCCC+TGG | + | tig0014834:12367-12386 | None:intergenic | 40.0% |
| TTCAGAAACAGCGGTTTAAG+TGG | - | tig0014834:12379-12398 | Msa1355520:CDS | 40.0% | |
| TCTTGATACCAATGGAGGTA+GGG | + | tig0014834:12551-12570 | None:intergenic | 40.0% | |
| GCCTATGAAATGGAGATTCA+AGG | + | tig0014834:11333-11352 | None:intergenic | 40.0% | |
| !!! | TGCGAGAATTTTTTCGATGG+TGG | - | tig0014834:11559-11578 | Msa1355520:CDS | 40.0% |
| !!! | GCGAGAATTTTTTCGATGGT+GGG | - | tig0014834:11560-11579 | Msa1355520:CDS | 40.0% |
| !!! | GAATTTTTTCGATGGTGGGA+AGG | - | tig0014834:11564-11583 | Msa1355520:CDS | 40.0% |
| !!! | ATTTTTTCGATGGTGGGAAG+GGG | - | tig0014834:11566-11585 | Msa1355520:CDS | 40.0% |
| AATGAAGTGGACGGATAATG+TGG | - | tig0014834:11612-11631 | Msa1355520:CDS | 40.0% | |
| !! | GGTGATGATGGAACAATTAG+TGG | - | tig0014834:11667-11686 | Msa1355520:CDS | 40.0% |
| TGATGGAACAATTAGTGGTG+TGG | - | tig0014834:11672-11691 | Msa1355520:CDS | 40.0% | |
| ! | TGGTGTTAAGAAGAAATCCG+GGG | - | tig0014834:11696-11715 | Msa1355520:CDS | 40.0% |
| AAGAGGTTGAATGAGATGCT+TGG | - | tig0014834:11832-11851 | Msa1355520:CDS | 40.0% | |
| GTTGAATGAGATGCTTGGTA+GGG | - | tig0014834:11837-11856 | Msa1355520:CDS | 40.0% | |
| TTGAATGAGATGCTTGGTAG+GGG | - | tig0014834:11838-11857 | Msa1355520:CDS | 40.0% | |
| !! | TCCTGCATTGATGGATTCAA+TGG | - | tig0014834:11885-11904 | Msa1355520:CDS | 40.0% |
| ACCATTGAATCCATCAATGC+AGG | + | tig0014834:11889-11908 | None:intergenic | 40.0% | |
| GAAATGTGTGCATACCACAA+TGG | - | tig0014834:11976-11995 | Msa1355520:CDS | 40.0% | |
| TGAAAGTGAGGATGATGAGT+TGG | - | tig0014834:12107-12126 | Msa1355520:CDS | 40.0% | |
| ! | GAGGATGATGAGTTGGATAA+TGG | - | tig0014834:12114-12133 | Msa1355520:CDS | 40.0% |
| AACTTGAGAGTGAAATGGCA+AGG | - | tig0014834:12247-12266 | Msa1355520:CDS | 40.0% | |
| ACTTGAGAGTGAAATGGCAA+GGG | - | tig0014834:12248-12267 | Msa1355520:CDS | 40.0% | |
| !! | GGAGAAAAGAGAGTGGATTA+AGG | - | tig0014834:12299-12318 | Msa1355520:CDS | 40.0% |
| ! | GGAAGTCAACATTTTGCTCT+TGG | + | tig0014834:12341-12360 | None:intergenic | 40.0% |
| !! | AAAATGTTGACTTCCAAGCC+AGG | - | tig0014834:12346-12365 | Msa1355520:CDS | 40.0% |
| !! | AAATGTTGACTTCCAAGCCA+GGG | - | tig0014834:12347-12366 | Msa1355520:CDS | 40.0% |
| !! | TTTCTGAAGTTCAAAAGCCC+TGG | + | tig0014834:12367-12386 | None:intergenic | 40.0% |
| TTCAGAAACAGCGGTTTAAG+TGG | - | tig0014834:12379-12398 | Msa1355520:CDS | 40.0% | |
| TCTTGATACCAATGGAGGTA+GGG | + | tig0014834:12551-12570 | None:intergenic | 40.0% | |
| !! | AATGGTTCTTCTGGTTTGGG+TGG | - | tig0014834:11271-11290 | Msa1355520:CDS | 45.0% |
| CAACAGACTCAGTTAGCTCA+TGG | - | tig0014834:11358-11377 | Msa1355520:CDS | 45.0% | |
| GAAGACGATGAGCATGGTTA+CGG | - | tig0014834:11523-11542 | Msa1355520:CDS | 45.0% | |
| AGCATGGTTACGGAGAAGAT+GGG | - | tig0014834:11533-11552 | Msa1355520:CDS | 45.0% | |
| ! | ATGGTGGGAAGGGGAAAAAA+GGG | - | tig0014834:11575-11594 | Msa1355520:CDS | 45.0% |
| TTGGCAGAGAATGAAGTGGA+CGG | - | tig0014834:11603-11622 | Msa1355520:CDS | 45.0% | |
| AAGTGGACGGATAATGTGGT+TGG | - | tig0014834:11616-11635 | Msa1355520:CDS | 45.0% | |
| AGTGGACGGATAATGTGGTT+GGG | - | tig0014834:11617-11636 | Msa1355520:CDS | 45.0% | |
| ATAGCAGTGGTGAGTTGTGT+TGG | - | tig0014834:11646-11665 | Msa1355520:CDS | 45.0% | |
| !! | GTGAGTTGTGTTGGTGATGA+TGG | - | tig0014834:11655-11674 | Msa1355520:CDS | 45.0% |
| GGAACAATTAGTGGTGTGGA+TGG | - | tig0014834:11676-11695 | Msa1355520:CDS | 45.0% | |
| TGTCACAGAAGAAGGGTAAG+TGG | - | tig0014834:11719-11738 | Msa1355520:CDS | 45.0% | |
| AACTTATCCTCACACTGCTG+CGG | + | tig0014834:11790-11809 | None:intergenic | 45.0% | |
| GGTTGAATGAGATGCTTGGT+AGG | - | tig0014834:11836-11855 | Msa1355520:CDS | 45.0% | |
| GGTTGAGAATCCTGCATTGA+TGG | - | tig0014834:11876-11895 | Msa1355520:CDS | 45.0% | |
| ! | TAACTTGTCTGCTAAGGCGA+AGG | - | tig0014834:11909-11928 | Msa1355520:CDS | 45.0% |
| GTGCATACCACAATGGTCAA+AGG | - | tig0014834:11983-12002 | Msa1355520:CDS | 45.0% | |
| TGGGTATCCTTTGACCATTG+TGG | + | tig0014834:11993-12012 | None:intergenic | 45.0% | |
| TTATTCGTTGGAACACGGGA+AGG | - | tig0014834:12038-12057 | Msa1355520:CDS | 45.0% | |
| AAGGACTCAAGAGATCACGA+TGG | - | tig0014834:12057-12076 | Msa1355520:CDS | 45.0% | |
| !! | ATTAATGCACGTGGTGATGG+AGG | - | tig0014834:12144-12163 | Msa1355520:CDS | 45.0% |
| !! | TTAATGCACGTGGTGATGGA+GGG | - | tig0014834:12145-12164 | Msa1355520:CDS | 45.0% |
| TTCTTCATCCCACTAGACTG+CGG | + | tig0014834:12228-12247 | None:intergenic | 45.0% | |
| ! | ATCCACTCTCTTTTCTCCCA+CGG | + | tig0014834:12297-12316 | None:intergenic | 45.0% |
| GTTAAGATACCGCAGCAAGA+AGG | - | tig0014834:12401-12420 | Msa1355520:CDS | 45.0% | |
| ATACCGCAGCAAGAAGGATA+GGG | - | tig0014834:12407-12426 | Msa1355520:CDS | 45.0% | |
| AAAGCTGAAGCAGAGAGATC+AGG | - | tig0014834:12491-12510 | Msa1355520:CDS | 45.0% | |
| CTCTTGATACCAATGGAGGT+AGG | + | tig0014834:12552-12571 | None:intergenic | 45.0% | |
| CTACCTCCATTGGTATCAAG+AGG | - | tig0014834:12550-12569 | Msa1355520:CDS | 45.0% | |
| TTGTGGCCTCTTGATACCAA+TGG | + | tig0014834:12559-12578 | None:intergenic | 45.0% | |
| ATTGGTATCAAGAGGCCACA+AGG | - | tig0014834:12558-12577 | Msa1355520:CDS | 45.0% | |
| TTGGTATCAAGAGGCCACAA+GGG | - | tig0014834:12559-12578 | Msa1355520:CDS | 45.0% | |
| TTGATATGTTCCCTCCCTTG+TGG | + | tig0014834:12576-12595 | None:intergenic | 45.0% | |
| AGGGAGGGAACATATCAACT+TGG | - | tig0014834:12578-12597 | Msa1355520:CDS | 45.0% | |
| !! | AATGGTTCTTCTGGTTTGGG+TGG | - | tig0014834:11271-11290 | Msa1355520:CDS | 45.0% |
| CAACAGACTCAGTTAGCTCA+TGG | - | tig0014834:11358-11377 | Msa1355520:CDS | 45.0% | |
| GAAGACGATGAGCATGGTTA+CGG | - | tig0014834:11523-11542 | Msa1355520:CDS | 45.0% | |
| AGCATGGTTACGGAGAAGAT+GGG | - | tig0014834:11533-11552 | Msa1355520:CDS | 45.0% | |
| ! | ATGGTGGGAAGGGGAAAAAA+GGG | - | tig0014834:11575-11594 | Msa1355520:CDS | 45.0% |
| TTGGCAGAGAATGAAGTGGA+CGG | - | tig0014834:11603-11622 | Msa1355520:CDS | 45.0% | |
| AAGTGGACGGATAATGTGGT+TGG | - | tig0014834:11616-11635 | Msa1355520:CDS | 45.0% | |
| AGTGGACGGATAATGTGGTT+GGG | - | tig0014834:11617-11636 | Msa1355520:CDS | 45.0% | |
| ATAGCAGTGGTGAGTTGTGT+TGG | - | tig0014834:11646-11665 | Msa1355520:CDS | 45.0% | |
| !! | GTGAGTTGTGTTGGTGATGA+TGG | - | tig0014834:11655-11674 | Msa1355520:CDS | 45.0% |
| GGAACAATTAGTGGTGTGGA+TGG | - | tig0014834:11676-11695 | Msa1355520:CDS | 45.0% | |
| TGTCACAGAAGAAGGGTAAG+TGG | - | tig0014834:11719-11738 | Msa1355520:CDS | 45.0% | |
| AACTTATCCTCACACTGCTG+CGG | + | tig0014834:11790-11809 | None:intergenic | 45.0% | |
| GGTTGAATGAGATGCTTGGT+AGG | - | tig0014834:11836-11855 | Msa1355520:CDS | 45.0% | |
| GGTTGAGAATCCTGCATTGA+TGG | - | tig0014834:11876-11895 | Msa1355520:CDS | 45.0% | |
| ! | TAACTTGTCTGCTAAGGCGA+AGG | - | tig0014834:11909-11928 | Msa1355520:CDS | 45.0% |
| GTGCATACCACAATGGTCAA+AGG | - | tig0014834:11983-12002 | Msa1355520:CDS | 45.0% | |
| TGGGTATCCTTTGACCATTG+TGG | + | tig0014834:11993-12012 | None:intergenic | 45.0% | |
| TTATTCGTTGGAACACGGGA+AGG | - | tig0014834:12038-12057 | Msa1355520:CDS | 45.0% | |
| AAGGACTCAAGAGATCACGA+TGG | - | tig0014834:12057-12076 | Msa1355520:CDS | 45.0% | |
| !! | ATTAATGCACGTGGTGATGG+AGG | - | tig0014834:12144-12163 | Msa1355520:CDS | 45.0% |
| !! | TTAATGCACGTGGTGATGGA+GGG | - | tig0014834:12145-12164 | Msa1355520:CDS | 45.0% |
| TTCTTCATCCCACTAGACTG+CGG | + | tig0014834:12228-12247 | None:intergenic | 45.0% | |
| ! | ATCCACTCTCTTTTCTCCCA+CGG | + | tig0014834:12297-12316 | None:intergenic | 45.0% |
| GTTAAGATACCGCAGCAAGA+AGG | - | tig0014834:12401-12420 | Msa1355520:CDS | 45.0% | |
| ATACCGCAGCAAGAAGGATA+GGG | - | tig0014834:12407-12426 | Msa1355520:CDS | 45.0% | |
| AAAGCTGAAGCAGAGAGATC+AGG | - | tig0014834:12491-12510 | Msa1355520:CDS | 45.0% | |
| CTCTTGATACCAATGGAGGT+AGG | + | tig0014834:12552-12571 | None:intergenic | 45.0% | |
| CTACCTCCATTGGTATCAAG+AGG | - | tig0014834:12550-12569 | Msa1355520:CDS | 45.0% | |
| TTGTGGCCTCTTGATACCAA+TGG | + | tig0014834:12559-12578 | None:intergenic | 45.0% | |
| ATTGGTATCAAGAGGCCACA+AGG | - | tig0014834:12558-12577 | Msa1355520:CDS | 45.0% | |
| TTGGTATCAAGAGGCCACAA+GGG | - | tig0014834:12559-12578 | Msa1355520:CDS | 45.0% | |
| TTGATATGTTCCCTCCCTTG+TGG | + | tig0014834:12576-12595 | None:intergenic | 45.0% | |
| AGGGAGGGAACATATCAACT+TGG | - | tig0014834:12578-12597 | Msa1355520:CDS | 45.0% | |
| !! | GTTCTTCTGGTTTGGGTGGT+GGG | - | tig0014834:11275-11294 | Msa1355520:CDS | 50.0% |
| !!! | TTGGGTGGTGGGTTTTTGAG+TGG | - | tig0014834:11286-11305 | Msa1355520:CDS | 50.0% |
| AAGGTCCAAAATACCCCCAG+CGG | + | tig0014834:11314-11333 | None:intergenic | 50.0% | |
| ATGAGCGAAGACGATGAGCA+TGG | - | tig0014834:11517-11536 | Msa1355520:CDS | 50.0% | |
| GAGCATGGTTACGGAGAAGA+TGG | - | tig0014834:11532-11551 | Msa1355520:CDS | 50.0% | |
| !! | GATGGTGGGAAGGGGAAAAA+AGG | - | tig0014834:11574-11593 | Msa1355520:CDS | 50.0% |
| AGGGGAAAAAAGGGTCTCCT+TGG | - | tig0014834:11584-11603 | Msa1355520:CDS | 50.0% | |
| CTCCTTGGCAGAGAATGAAG+TGG | - | tig0014834:11599-11618 | Msa1355520:CDS | 50.0% | |
| GTCCACTTCATTCTCTGCCA+AGG | + | tig0014834:11604-11623 | None:intergenic | 50.0% | |
| GGTTGGGCTTCTTATAGCAG+TGG | - | tig0014834:11633-11652 | Msa1355520:CDS | 50.0% | |
| !! | TGGTAGGGGAACTTGTTGTC+AGG | - | tig0014834:11852-11871 | Msa1355520:CDS | 50.0% |
| !! | TAGGGGAACTTGTTGTCAGG+TGG | - | tig0014834:11855-11874 | Msa1355520:CDS | 50.0% |
| ! | GTGATGGAGGGAGAATGGAA+GGG | - | tig0014834:12157-12176 | Msa1355520:CDS | 50.0% |
| ! | ACTTTTGGCCGCAGTCTAGT+GGG | - | tig0014834:12217-12236 | Msa1355520:CDS | 50.0% |
| GAAGTTCAAAAGCCCTGGCT+TGG | + | tig0014834:12362-12381 | None:intergenic | 50.0% | |
| GATACCGCAGCAAGAAGGAT+AGG | - | tig0014834:12406-12425 | Msa1355520:CDS | 50.0% | |
| ATCAGGAGGCAGAGTTCAGT+AGG | - | tig0014834:12508-12527 | Msa1355520:CDS | 50.0% | |
| TCCTTAGACCCTACCTCCAT+TGG | - | tig0014834:12540-12559 | Msa1355520:CDS | 50.0% | |
| ACCAATGGAGGTAGGGTCTA+AGG | + | tig0014834:12544-12563 | None:intergenic | 50.0% | |
| TGGCCTCTTGATACCAATGG+AGG | + | tig0014834:12556-12575 | None:intergenic | 50.0% | |
| TATCAAGAGGCCACAAGGGA+GGG | - | tig0014834:12563-12582 | Msa1355520:CDS | 50.0% | |
| !! | GTTCTTCTGGTTTGGGTGGT+GGG | - | tig0014834:11275-11294 | Msa1355520:CDS | 50.0% |
| !!! | TTGGGTGGTGGGTTTTTGAG+TGG | - | tig0014834:11286-11305 | Msa1355520:CDS | 50.0% |
| AAGGTCCAAAATACCCCCAG+CGG | + | tig0014834:11314-11333 | None:intergenic | 50.0% | |
| ATGAGCGAAGACGATGAGCA+TGG | - | tig0014834:11517-11536 | Msa1355520:CDS | 50.0% | |
| GAGCATGGTTACGGAGAAGA+TGG | - | tig0014834:11532-11551 | Msa1355520:CDS | 50.0% | |
| !! | GATGGTGGGAAGGGGAAAAA+AGG | - | tig0014834:11574-11593 | Msa1355520:CDS | 50.0% |
| AGGGGAAAAAAGGGTCTCCT+TGG | - | tig0014834:11584-11603 | Msa1355520:CDS | 50.0% | |
| CTCCTTGGCAGAGAATGAAG+TGG | - | tig0014834:11599-11618 | Msa1355520:CDS | 50.0% | |
| GTCCACTTCATTCTCTGCCA+AGG | + | tig0014834:11604-11623 | None:intergenic | 50.0% | |
| GGTTGGGCTTCTTATAGCAG+TGG | - | tig0014834:11633-11652 | Msa1355520:CDS | 50.0% | |
| !! | TGGTAGGGGAACTTGTTGTC+AGG | - | tig0014834:11852-11871 | Msa1355520:CDS | 50.0% |
| !! | TAGGGGAACTTGTTGTCAGG+TGG | - | tig0014834:11855-11874 | Msa1355520:CDS | 50.0% |
| ! | GTGATGGAGGGAGAATGGAA+GGG | - | tig0014834:12157-12176 | Msa1355520:CDS | 50.0% |
| ! | ACTTTTGGCCGCAGTCTAGT+GGG | - | tig0014834:12217-12236 | Msa1355520:CDS | 50.0% |
| GAAGTTCAAAAGCCCTGGCT+TGG | + | tig0014834:12362-12381 | None:intergenic | 50.0% | |
| GATACCGCAGCAAGAAGGAT+AGG | - | tig0014834:12406-12425 | Msa1355520:CDS | 50.0% | |
| ATCAGGAGGCAGAGTTCAGT+AGG | - | tig0014834:12508-12527 | Msa1355520:CDS | 50.0% | |
| TCCTTAGACCCTACCTCCAT+TGG | - | tig0014834:12540-12559 | Msa1355520:CDS | 50.0% | |
| ACCAATGGAGGTAGGGTCTA+AGG | + | tig0014834:12544-12563 | None:intergenic | 50.0% | |
| TGGCCTCTTGATACCAATGG+AGG | + | tig0014834:12556-12575 | None:intergenic | 50.0% | |
| TATCAAGAGGCCACAAGGGA+GGG | - | tig0014834:12563-12582 | Msa1355520:CDS | 50.0% | |
| !! | GGTTCTTCTGGTTTGGGTGG+TGG | - | tig0014834:11274-11293 | Msa1355520:CDS | 55.0% |
| !!! | GGTTTTTGAGTGGTCCCGCT+GGG | - | tig0014834:11296-11315 | Msa1355520:CDS | 55.0% |
| !!! | GTTTTTGAGTGGTCCCGCTG+GGG | - | tig0014834:11297-11316 | Msa1355520:CDS | 55.0% |
| !!! | TTTTTGAGTGGTCCCGCTGG+GGG | - | tig0014834:11298-11317 | Msa1355520:CDS | 55.0% |
| AGGTCCAAAATACCCCCAGC+GGG | + | tig0014834:11313-11332 | None:intergenic | 55.0% | |
| ! | ATCCGGGGTGTCACAGAAGA+AGG | - | tig0014834:11711-11730 | Msa1355520:CDS | 55.0% |
| ! | TCCGGGGTGTCACAGAAGAA+GGG | - | tig0014834:11712-11731 | Msa1355520:CDS | 55.0% |
| ACCCTTCTTCTGTGACACCC+CGG | + | tig0014834:11716-11735 | None:intergenic | 55.0% | |
| !! | ACGTGGTGATGGAGGGAGAA+TGG | - | tig0014834:12152-12171 | Msa1355520:CDS | 55.0% |
| !! | GGTGATGGAGGGAGAATGGA+AGG | - | tig0014834:12156-12175 | Msa1355520:CDS | 55.0% |
| !! | GTGAGGAGGATGGCCACTTT+TGG | - | tig0014834:12202-12221 | Msa1355520:CDS | 55.0% |
| CACTAGACTGCGGCCAAAAG+TGG | + | tig0014834:12218-12237 | None:intergenic | 55.0% | |
| ! | CACTTTTGGCCGCAGTCTAG+TGG | - | tig0014834:12216-12235 | Msa1355520:CDS | 55.0% |
| AAGACCCTGCAAAGTCTCCG+TGG | - | tig0014834:12277-12296 | Msa1355520:CDS | 55.0% | |
| AGACCCTGCAAAGTCTCCGT+GGG | - | tig0014834:12278-12297 | Msa1355520:CDS | 55.0% | |
| TCTCCCACGGAGACTTTGCA+GGG | + | tig0014834:12284-12303 | None:intergenic | 55.0% | |
| TTCTCCCACGGAGACTTTGC+AGG | + | tig0014834:12285-12304 | None:intergenic | 55.0% | |
| CTCCGTGGGAGAAAAGAGAG+TGG | - | tig0014834:12292-12311 | Msa1355520:CDS | 55.0% | |
| GCTCCCTATCCTTCTTGCTG+CGG | + | tig0014834:12413-12432 | None:intergenic | 55.0% | |
| CAGCAAGAAGGATAGGGAGC+TGG | - | tig0014834:12413-12432 | Msa1355520:CDS | 55.0% | |
| GCTGAAGCAGAGAGATCAGG+AGG | - | tig0014834:12494-12513 | Msa1355520:CDS | 55.0% | |
| GTATCAAGAGGCCACAAGGG+AGG | - | tig0014834:12562-12581 | Msa1355520:CDS | 55.0% | |
| !! | GGTTCTTCTGGTTTGGGTGG+TGG | - | tig0014834:11274-11293 | Msa1355520:CDS | 55.0% |
| !!! | GGTTTTTGAGTGGTCCCGCT+GGG | - | tig0014834:11296-11315 | Msa1355520:CDS | 55.0% |
| !!! | GTTTTTGAGTGGTCCCGCTG+GGG | - | tig0014834:11297-11316 | Msa1355520:CDS | 55.0% |
| !!! | TTTTTGAGTGGTCCCGCTGG+GGG | - | tig0014834:11298-11317 | Msa1355520:CDS | 55.0% |
| AGGTCCAAAATACCCCCAGC+GGG | + | tig0014834:11313-11332 | None:intergenic | 55.0% | |
| ! | ATCCGGGGTGTCACAGAAGA+AGG | - | tig0014834:11711-11730 | Msa1355520:CDS | 55.0% |
| ! | TCCGGGGTGTCACAGAAGAA+GGG | - | tig0014834:11712-11731 | Msa1355520:CDS | 55.0% |
| ACCCTTCTTCTGTGACACCC+CGG | + | tig0014834:11716-11735 | None:intergenic | 55.0% | |
| !! | ACGTGGTGATGGAGGGAGAA+TGG | - | tig0014834:12152-12171 | Msa1355520:CDS | 55.0% |
| !! | GGTGATGGAGGGAGAATGGA+AGG | - | tig0014834:12156-12175 | Msa1355520:CDS | 55.0% |
| !! | GTGAGGAGGATGGCCACTTT+TGG | - | tig0014834:12202-12221 | Msa1355520:CDS | 55.0% |
| CACTAGACTGCGGCCAAAAG+TGG | + | tig0014834:12218-12237 | None:intergenic | 55.0% | |
| ! | CACTTTTGGCCGCAGTCTAG+TGG | - | tig0014834:12216-12235 | Msa1355520:CDS | 55.0% |
| AAGACCCTGCAAAGTCTCCG+TGG | - | tig0014834:12277-12296 | Msa1355520:CDS | 55.0% | |
| AGACCCTGCAAAGTCTCCGT+GGG | - | tig0014834:12278-12297 | Msa1355520:CDS | 55.0% | |
| TCTCCCACGGAGACTTTGCA+GGG | + | tig0014834:12284-12303 | None:intergenic | 55.0% | |
| TTCTCCCACGGAGACTTTGC+AGG | + | tig0014834:12285-12304 | None:intergenic | 55.0% | |
| CTCCGTGGGAGAAAAGAGAG+TGG | - | tig0014834:12292-12311 | Msa1355520:CDS | 55.0% | |
| GCTCCCTATCCTTCTTGCTG+CGG | + | tig0014834:12413-12432 | None:intergenic | 55.0% | |
| CAGCAAGAAGGATAGGGAGC+TGG | - | tig0014834:12413-12432 | Msa1355520:CDS | 55.0% | |
| GCTGAAGCAGAGAGATCAGG+AGG | - | tig0014834:12494-12513 | Msa1355520:CDS | 55.0% | |
| GTATCAAGAGGCCACAAGGG+AGG | - | tig0014834:12562-12581 | Msa1355520:CDS | 55.0% | |
| !!! | GGGTTTTTGAGTGGTCCCGC+TGG | - | tig0014834:11295-11314 | Msa1355520:CDS | 60.0% |
| !!! | TGGTCCCGCTGGGGGTATTT+TGG | - | tig0014834:11306-11325 | Msa1355520:CDS | 60.0% |
| GGATAGGGAGCTGGAGAAGC+TGG | - | tig0014834:12422-12441 | Msa1355520:CDS | 60.0% | |
| !!! | GGGTTTTTGAGTGGTCCCGC+TGG | - | tig0014834:11295-11314 | Msa1355520:CDS | 60.0% |
| !!! | TGGTCCCGCTGGGGGTATTT+TGG | - | tig0014834:11306-11325 | Msa1355520:CDS | 60.0% |
| GGATAGGGAGCTGGAGAAGC+TGG | - | tig0014834:12422-12441 | Msa1355520:CDS | 60.0% | |
| TGTGTCGCCGCAGCAGTGTG+AGG | - | tig0014834:11780-11799 | Msa1355520:CDS | 65.0% | |
| GGAGCTGGAGAAGCTGGCGA+TGG | - | tig0014834:12428-12447 | Msa1355520:CDS | 65.0% | |
| TGTGTCGCCGCAGCAGTGTG+AGG | - | tig0014834:11780-11799 | Msa1355520:CDS | 65.0% | |
| GGAGCTGGAGAAGCTGGCGA+TGG | - | tig0014834:12428-12447 | Msa1355520:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0014834 | gene | 11268 | 12614 | 11268 | ID=Msa1355520;Name=Msa1355520 |
| tig0014834 | mRNA | 11268 | 12614 | 11268 | ID=Msa1355520-mRNA-1;Parent=Msa1355520;Name=Msa1355520-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|-1|0|1|-1|1|1|0|448 |
| tig0014834 | exon | 11268 | 12614 | 11268 | ID=Msa1355520-mRNA-1:exon:9529;Parent=Msa1355520-mRNA-1 |
| tig0014834 | CDS | 11268 | 12614 | 11268 | ID=Msa1355520-mRNA-1:cds;Parent=Msa1355520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
