AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0905750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0905750 MtrunA17_Chr6g0453631 98.643 221 3 0 1 221 1 221 2.48e-162 447
Msa0905750 MtrunA17_Chr7g0217961 82.805 221 38 0 1 221 1 221 2.62e-135 379
Msa0905750 MtrunA17_Chr3g0091631 68.636 220 69 0 1 220 64 283 1.13e-112 323
Msa0905750 MtrunA17_Chr5g0418041 63.182 220 80 1 1 219 1 220 6.54e-103 296
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0905750 AT3G29100.3 74.661 221 56 0 1 221 1 221 2.57e-125 353
Msa0905750 AT5G39510.1 74.661 221 56 0 1 221 1 221 8.76e-117 332
Msa0905750 AT1G26670.1 65.909 220 74 1 1 219 1 220 5.92e-108 310
Msa0905750 AT3G29100.1 74.706 170 43 0 52 221 26 195 2.04e-93 272
Msa0905750 AT3G29100.2 75.449 167 41 0 55 221 1 167 2.53e-92 268
Msa0905750 AT3G29100.4 75.449 167 41 0 55 221 1 167 2.53e-92 268
Msa0905750 AT3G29100.5 75.449 167 41 0 55 221 1 167 2.53e-92 268
Msa0905750 AT5G39630.1 45.249 221 107 2 1 221 1 207 4.04e-57 180

Find 79 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTATTCTGATTTGTGAT+TGG 0.250953 6_2:-3988057 Msa0905750:three_prime_UTR
TTACCTGCATTCTATTTCTA+TGG 0.265615 6_2:-3987813 Msa0905750:three_prime_UTR
AGAAGTACGCCCTTGATATT+TGG 0.266172 6_2:+3989280 None:intergenic
GAGTTCAAACAATATTTCTA+TGG 0.333314 6_2:-3987849 Msa0905750:three_prime_UTR
CAAATTCAAACATTATTACT+TGG 0.336594 6_2:+3987778 None:intergenic
TATGCTCACTTGCAGCTTCA+TGG 0.345802 6_2:-3988296 Msa0905750:intron
TCTTATTCTGATTTGTGATT+GGG 0.350758 6_2:-3988056 Msa0905750:three_prime_UTR
GAAGTTAAGAAAATTGTATC+TGG 0.358519 6_2:-3989211 Msa0905750:CDS
AGGCCTACTTGTCCTCATAT+TGG 0.362268 6_2:-3988123 Msa0905750:three_prime_UTR
ATTTAACAAGTTTGAAGTAT+AGG 0.376074 6_2:+3988153 None:intergenic
ACGTGCGGTGGTCGGGGAAG+CGG 0.376348 6_2:+3992445 None:intergenic
ACTGCAGCTACAGCTCTTAA+TGG 0.384286 6_2:-3992116 Msa0905750:CDS
CGGGATGAATTGTTGGAATC+AGG 0.384558 6_2:-3989169 Msa0905750:CDS
CGTACTTCTTGCTAAGTTGC+GGG 0.400581 6_2:-3989266 Msa0905750:CDS
AATTGATGAAGCAGAGGCTT+TGG 0.405885 6_2:-3989417 Msa0905750:intron
CAAGACTGGTGAACGAGTTA+AGG 0.419278 6_2:-3988982 Msa0905750:CDS
TTCTGCACGGGATGAATTGT+TGG 0.425706 6_2:-3989176 Msa0905750:CDS
AACAAGAACAAGTGGATCAT+TGG 0.431646 6_2:-3988215 Msa0905750:CDS
CAGCATAACCACGAAGAATC+TGG 0.431760 6_2:+3987875 None:intergenic
GATATTTATGAACCAATATG+AGG 0.440996 6_2:+3988111 None:intergenic
TTATGACAAACATGTCTAGA+AGG 0.449390 6_2:-3988241 Msa0905750:CDS
TGGCTGCATTGTGCTCGTCC+TGG 0.452609 6_2:-3988195 Msa0905750:CDS
TTCAAACATTATTACTTGGA+CGG 0.455335 6_2:+3987782 None:intergenic
GATGATGTTGGCTTCGTTGA+AGG 0.456056 6_2:-3987992 Msa0905750:three_prime_UTR
AAGTTCCGAAAGGAGAAGTT+TGG 0.456497 6_2:+3992524 None:intergenic
CAACACCAAACTTCTCCTTT+CGG 0.465947 6_2:-3992529 Msa0905750:five_prime_UTR
AAACTTGTTAAATAGTCAAA+AGG 0.474593 6_2:-3988143 Msa0905750:exon
AATAGAAACACCTAGCTCTT+CGG 0.477415 6_2:+3988935 None:intergenic
GGATAGTAGGAGAACAATGT+TGG 0.477424 6_2:-3988961 Msa0905750:CDS
TTACAAAACCAGATTCTTCG+TGG 0.484853 6_2:-3987883 Msa0905750:three_prime_UTR
GCTGTAAACTTCTTGCCTCA+AGG 0.487755 6_2:+3989302 None:intergenic
AATGGCATGTGTCTTATGTC+GGG 0.490943 6_2:-3987963 Msa0905750:three_prime_UTR
AAGTTTACAGCCAAATATCA+AGG 0.491164 6_2:-3989290 Msa0905750:CDS
AGAATGAGTAACGTGTTTGA+AGG 0.491550 6_2:-3992188 Msa0905750:CDS
GCAAGTTAACTTGATGATGT+TGG 0.495018 6_2:-3988004 Msa0905750:three_prime_UTR
GAACTTCCGCAACCATTCTC+CGG 0.498400 6_2:-3992507 Msa0905750:five_prime_UTR
ATTGCCTCCCATTACAAAAG+AGG 0.504544 6_2:-3992620 None:intergenic
GGTCGGGGAAGCGGAGGTGA+CGG 0.506957 6_2:+3992454 None:intergenic
GTGAACGAGTTAAGGATAGT+AGG 0.508845 6_2:-3988974 Msa0905750:CDS
CGAAAGGAGAAGTTTGGTGT+TGG 0.509543 6_2:+3992530 None:intergenic
CAATGGCATGTGTCTTATGT+CGG 0.514949 6_2:-3987964 Msa0905750:three_prime_UTR
GATCGTACGTGCGGTGGTCG+GGG 0.525305 6_2:+3992439 None:intergenic
GCGTACTTCTTGCTAAGTTG+CGG 0.526345 6_2:-3989267 Msa0905750:CDS
GACGGCGAAGGTTGAAGAAA+CGG 0.527842 6_2:+3992472 None:intergenic
GTCGCTGTGAATGTAAATCT+TGG 0.531960 6_2:+3988910 None:intergenic
TTTGTAATTAAAATCTTGCA+AGG 0.532187 6_2:+3987899 None:intergenic
AACAATTCATCCCGTGCAGA+AGG 0.532426 6_2:+3989178 None:intergenic
TGCGGTGGTCGGGGAAGCGG+AGG 0.534878 6_2:+3992448 None:intergenic
CGGGAAAATTGACCGGAGAA+TGG 0.535340 6_2:+3992495 None:intergenic
AAAGTTTCGGAAGTAAAGGC+TGG 0.543764 6_2:-3989440 Msa0905750:CDS
AAACTTGAATCCTTCTGCAC+GGG 0.560531 6_2:-3989188 Msa0905750:CDS
ATGATGTTGGCTTCGTTGAA+GGG 0.562147 6_2:-3987991 Msa0905750:three_prime_UTR
GGAAGCGGAGGTGACGGCGA+AGG 0.562227 6_2:+3992460 None:intergenic
GAGATCGTACGTGCGGTGGT+CGG 0.564429 6_2:+3992437 None:intergenic
ACTGAGAGGTTGAACAAGAC+TGG 0.566247 6_2:-3988996 Msa0905750:CDS
CGACATAAGACACATGCCAT+TGG 0.574278 6_2:+3987965 None:intergenic
CTTCGTTGAAGGGACACCAA+TGG 0.577014 6_2:-3987981 Msa0905750:three_prime_UTR
GAAGGATGAACAAGAACAAG+TGG 0.577885 6_2:-3988223 Msa0905750:CDS
AATTGACCGGAGAATGGTTG+CGG 0.579088 6_2:+3992501 None:intergenic
GAACCAATATGAGGACAAGT+AGG 0.582060 6_2:+3988120 None:intergenic
TTGTAATTAAAATCTTGCAA+GGG 0.584548 6_2:+3987900 None:intergenic
GAAACTTGAATCCTTCTGCA+CGG 0.597232 6_2:-3989189 Msa0905750:CDS
GAAACGGCGGGAAAATTGAC+CGG 0.600107 6_2:+3992488 None:intergenic
ACACCATAGAAATAGAATGC+AGG 0.603134 6_2:+3987810 None:intergenic
GGCTGGAATTGATGAAGCAG+AGG 0.608179 6_2:-3989423 Msa0905750:CDS
TGAATTGTTGGAATCAGGCA+TGG 0.618002 6_2:-3989164 Msa0905750:CDS
CATGGCGTGGATGATAACAT+AGG 0.620321 6_2:-3988278 Msa0905750:CDS
GCGAAGGTTGAAGAAACGGC+GGG 0.620979 6_2:+3992476 None:intergenic
ATGTTGGAAACCGAAGAGCT+AGG 0.633551 6_2:-3988945 Msa0905750:CDS
AGTTTACAGCCAAATATCAA+GGG 0.635893 6_2:-3989289 Msa0905750:CDS
TCACTTGCAGCTTCATGGCG+TGG 0.637480 6_2:-3988291 Msa0905750:intron
GAGAGAGATCGTACGTGCGG+TGG 0.666236 6_2:+3992433 None:intergenic
GGCGAAGGTTGAAGAAACGG+CGG 0.668713 6_2:+3992475 None:intergenic
ATGGTTGCGGAAGTTCCGAA+AGG 0.677237 6_2:+3992514 None:intergenic
TAGCAATGATAGCAACAACC+AGG 0.682704 6_2:+3988177 None:intergenic
TCTACTGCATGCTCATAACA+CGG 0.687436 6_2:-3988883 Msa0905750:intron
AGGCATGGCAGATACTATGA+CGG 0.691237 6_2:-3989149 Msa0905750:intron
GCAGCTACAGCTCTTAATGG+AGG 0.704927 6_2:-3992113 Msa0905750:intron
GATTAATGACATCAACTGAG+AGG 0.717585 6_2:-3989010 Msa0905750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTTTATAAAT+TGG + chr6_2:3988115-3988134 None:intergenic 0.0%
!!! TTTAAAAAATAATAATTTTT+AGG - chr6_2:3989943-3989962 Msa0905750:intron 0.0%
!!! TTTAAAATTGAGTATAAAAT+AGG - chr6_2:3988637-3988656 Msa0905750:intron 10.0%
!! TTAAAATTGAGTATAAAATA+GGG - chr6_2:3988638-3988657 Msa0905750:intron 10.0%
!!! TTTTCGTTTTTAAAAATTTA+AGG - chr6_2:3989041-3989060 Msa0905750:intron 10.0%
!!! TTTCGTTTTTAAAAATTTAA+GGG - chr6_2:3989042-3989061 Msa0905750:intron 10.0%
!!! ATCAAAAAAAATATTTTACA+GGG + chr6_2:3989116-3989135 None:intergenic 10.0%
!!! AATCAAAAAAAATATTTTAC+AGG + chr6_2:3989117-3989136 None:intergenic 10.0%
!! TGAAGAAAAAAATAAAAAAT+TGG - chr6_2:3989203-3989222 Msa0905750:CDS 10.0%
!!! CTAATTGATAATTAAATTTT+GGG + chr6_2:3989357-3989376 None:intergenic 10.0%
!!! TCTAATTGATAATTAAATTT+TGG + chr6_2:3989358-3989377 None:intergenic 10.0%
!!! ATACTAGTATTATTATTTTT+TGG + chr6_2:3989805-3989824 None:intergenic 10.0%
!!! ATTTATACTTTTTTTTAGAT+AGG + chr6_2:3990420-3990439 None:intergenic 10.0%
!!! TCTAAAAAAAAGTATAAATT+TGG - chr6_2:3990421-3990440 Msa0905750:intron 10.0%
!!! CTAAAAAAAAGTATAAATTT+GGG - chr6_2:3990422-3990441 Msa0905750:intron 10.0%
!!! AATAGGGAAATTTTTTTATA+AGG - chr6_2:3988845-3988864 Msa0905750:intron 15.0%
!!! ATAGGGAAATTTTTTTATAA+GGG - chr6_2:3988846-3988865 Msa0905750:intron 15.0%
!! TTTAAAAATTTAAGGGTTAA+TGG - chr6_2:3989049-3989068 Msa0905750:intron 15.0%
!!! AAAACAAAAATATTTTACAG+GGG + chr6_2:3989143-3989162 None:intergenic 15.0%
!!! CAAAACAAAAATATTTTACA+GGG + chr6_2:3989144-3989163 None:intergenic 15.0%
!!! TCAAAACAAAAATATTTTAC+AGG + chr6_2:3989145-3989164 None:intergenic 15.0%
!! AATCAAAAAAAATATTTGAC+AGG - chr6_2:3989282-3989301 Msa0905750:CDS 15.0%
!! ATCAAAAAAAATATTTGACA+GGG - chr6_2:3989283-3989302 Msa0905750:CDS 15.0%
!!! TGTTTTTATAGCATTTATAT+GGG + chr6_2:3989601-3989620 None:intergenic 15.0%
!! AAGAGAAATTAGATAAATTT+GGG + chr6_2:3990532-3990551 None:intergenic 15.0%
!! AAAGAGAAATTAGATAAATT+TGG + chr6_2:3990533-3990552 None:intergenic 15.0%
!! ATTTCCAACTATAATATTAA+AGG + chr6_2:3991731-3991750 None:intergenic 15.0%
!!! CATAAGATACAATAATTTTT+TGG - chr6_2:3992293-3992312 Msa0905750:intron 15.0%
!!! ATTTTACAATGATCGAATTA+GGG - chr6_2:3988059-3988078 Msa0905750:three_prime_UTR 20.0%
!!! ATTTTTTTATAAGGGTTCAT+AGG - chr6_2:3988854-3988873 Msa0905750:intron 20.0%
!!! TTTTTTTATAAGGGTTCATA+GGG - chr6_2:3988855-3988874 Msa0905750:intron 20.0%
!!! AAACAAAAATATTTTACAGG+GGG + chr6_2:3989142-3989161 None:intergenic 20.0%
!!! ATTTTTTTCTTCAGAAATTC+TGG + chr6_2:3989196-3989215 None:intergenic 20.0%
!!! TCAAAACAAAAACATTTTAC+AGG - chr6_2:3989254-3989273 Msa0905750:CDS 20.0%
!!! CAAAACAAAAACATTTTACA+GGG - chr6_2:3989255-3989274 Msa0905750:CDS 20.0%
!!! AAAACAAAAACATTTTACAG+GGG - chr6_2:3989256-3989275 Msa0905750:CDS 20.0%
!!! TAGCTCCTATTATTTTTATT+TGG - chr6_2:3989534-3989553 Msa0905750:intron 20.0%
!!! GTGTTTTTATAGCATTTATA+TGG + chr6_2:3989602-3989621 None:intergenic 20.0%
!! TCGATTCTACAAAATTAATT+GGG + chr6_2:3989731-3989750 None:intergenic 20.0%
!!! AATTAATTTTGTAGAATCGA+GGG - chr6_2:3989731-3989750 Msa0905750:intron 20.0%
!! TGTTGAATGATATTACTAAT+GGG + chr6_2:3990187-3990206 None:intergenic 20.0%
!! ATGTTGAATGATATTACTAA+TGG + chr6_2:3990188-3990207 None:intergenic 20.0%
!!! TTTTCTTAACTTCACTTTTA+AGG + chr6_2:3991164-3991183 None:intergenic 20.0%
!! GTTTCCTTTAATATTATAGT+TGG - chr6_2:3991724-3991743 Msa0905750:intron 20.0%
!!! AAACTTTCATAAACCATTTT+AGG + chr6_2:3991809-3991828 None:intergenic 20.0%
!! TAAAATGGTTTATGAAAGTT+TGG - chr6_2:3991808-3991827 Msa0905750:intron 20.0%
!!! AATCAACAAAAAAAACCTTT+TGG + chr6_2:3991923-3991942 None:intergenic 20.0%
!!! ATTTAACAAGTTTGAAGTAT+AGG + chr6_2:3992232-3992251 None:intergenic 20.0%
!!! AAACTTGTTAAATAGTCAAA+AGG - chr6_2:3992239-3992258 Msa0905750:intron 20.0%
!! TTGTAATTAAAATCTTGCAA+GGG + chr6_2:3992485-3992504 None:intergenic 20.0%
!! TTTGTAATTAAAATCTTGCA+AGG + chr6_2:3992486-3992505 None:intergenic 20.0%
!! CAAATTCAAACATTATTACT+TGG + chr6_2:3992607-3992626 None:intergenic 20.0%
!! GATTTTACAATGATCGAATT+AGG - chr6_2:3988058-3988077 Msa0905750:three_prime_UTR 25.0%
!!! ACTTTGTTTTGATTTTTCTG+TGG - chr6_2:3988293-3988312 Msa0905750:intron 25.0%
!! AATTATTGATTGAGCTTAAG+TGG - chr6_2:3988431-3988450 Msa0905750:intron 25.0%
! TACATCCATTATTTACACTT+GGG + chr6_2:3988495-3988514 None:intergenic 25.0%
! TTACATCCATTATTTACACT+TGG + chr6_2:3988496-3988515 None:intergenic 25.0%
!!! AAGTGTAAATAATGGATGTA+AGG - chr6_2:3988495-3988514 Msa0905750:intron 25.0%
!!! AAATTTTACAACCATTGACT+GGG - chr6_2:3988661-3988680 Msa0905750:intron 25.0%
!!! ATTTCCCTATTCTCTTTTTT+GGG + chr6_2:3988836-3988855 None:intergenic 25.0%
!!! AATTTCCCTATTCTCTTTTT+TGG + chr6_2:3988837-3988856 None:intergenic 25.0%
!! TTTTGATATGGATATGGATA+TGG + chr6_2:3988913-3988932 None:intergenic 25.0%
! AACAACTGGTTACAAAAAAA+GGG + chr6_2:3988971-3988990 None:intergenic 25.0%
!! AAACAAAAACATTTTACAGG+GGG - chr6_2:3989257-3989276 Msa0905750:CDS 25.0%
! CCTGACCAAATAAAAATAAT+AGG + chr6_2:3989542-3989561 None:intergenic 25.0%
!!! CCTATTATTTTTATTTGGTC+AGG - chr6_2:3989539-3989558 Msa0905750:intron 25.0%
!!! TATTTTTATTTGGTCAGGAT+TGG - chr6_2:3989544-3989563 Msa0905750:intron 25.0%
! CTCGATTCTACAAAATTAAT+TGG + chr6_2:3989732-3989751 None:intergenic 25.0%
!! CAATTAATTTTGTAGAATCG+AGG - chr6_2:3989730-3989749 Msa0905750:intron 25.0%
!!! TAGAAAAAATGGGGTATTTT+TGG - chr6_2:3989883-3989902 Msa0905750:intron 25.0%
!!! TTTTGGAGAAAAACAATGTA+TGG - chr6_2:3989900-3989919 Msa0905750:intron 25.0%
! AACAATGTATGGTTAGAAAA+AGG - chr6_2:3989911-3989930 Msa0905750:intron 25.0%
! AGAGAAATTAGGAAAATCAA+GGG + chr6_2:3990148-3990167 None:intergenic 25.0%
! TAGAGAAATTAGGAAAATCA+AGG + chr6_2:3990149-3990168 None:intergenic 25.0%
! ATAATCAAGTTAACAATCCA+AGG + chr6_2:3990283-3990302 None:intergenic 25.0%
!! AAAAAGTATAAATTTGGGAG+AGG - chr6_2:3990427-3990446 Msa0905750:intron 25.0%
! AAATTAGATAAATTTGGGAG+AGG + chr6_2:3990527-3990546 None:intergenic 25.0%
! ACCAAAAAGAACAAAAACAA+GGG + chr6_2:3990697-3990716 None:intergenic 25.0%
!!! ATTTTTGAAGCATTAGCTAT+AGG - chr6_2:3990828-3990847 Msa0905750:intron 25.0%
! GAATTTGTAGATTCGAAAAA+TGG - chr6_2:3991056-3991075 Msa0905750:intron 25.0%
! GAAGTTAAGAAAATTGTATC+TGG - chr6_2:3991171-3991190 Msa0905750:intron 25.0%
! GCTCTATAGTAATTTCTATA+TGG - chr6_2:3991585-3991604 Msa0905750:intron 25.0%
! AAAAACTACAACTAGATAGT+TGG + chr6_2:3991666-3991685 None:intergenic 25.0%
!! AACTATCTAGTTGTAGTTTT+TGG - chr6_2:3991665-3991684 Msa0905750:intron 25.0%
!!! GGATTTGTTAATTCCTAAAA+TGG - chr6_2:3991793-3991812 Msa0905750:intron 25.0%
! TTACTTACTTTGTGTATAGT+TGG - chr6_2:3991952-3991971 Msa0905750:intron 25.0%
! GATATTTATGAACCAATATG+AGG + chr6_2:3992274-3992293 None:intergenic 25.0%
!! TTCTTATTCTGATTTGTGAT+TGG - chr6_2:3992325-3992344 Msa0905750:intron 25.0%
!! TCTTATTCTGATTTGTGATT+GGG - chr6_2:3992326-3992345 Msa0905750:intron 25.0%
!! GAGTTCAAACAATATTTCTA+TGG - chr6_2:3992533-3992552 Msa0905750:five_prime_UTR 25.0%
! TTCAAACATTATTACTTGGA+CGG + chr6_2:3992603-3992622 None:intergenic 25.0%
TTGATTGTGAATTGAACAGA+AGG - chr6_2:3988155-3988174 Msa0905750:CDS 30.0%
CACTTAAAGATGAATCGTTT+GGG - chr6_2:3988465-3988484 Msa0905750:intron 30.0%
ACTTAAAGATGAATCGTTTG+GGG - chr6_2:3988466-3988485 Msa0905750:intron 30.0%
!! ATAATGGATGTAAGGATCAT+TGG - chr6_2:3988503-3988522 Msa0905750:intron 30.0%
GATTTCCCATTTCTTAGAAA+CGG - chr6_2:3988557-3988576 Msa0905750:intron 30.0%
! GAAATTTTACAACCATTGAC+TGG - chr6_2:3988660-3988679 Msa0905750:intron 30.0%
TGAAAACTAAGTTTGAATCC+TGG - chr6_2:3988721-3988740 Msa0905750:intron 30.0%
TTACAAAAAAAGGGATGGAT+TGG + chr6_2:3988962-3988981 None:intergenic 30.0%
GAACAACTGGTTACAAAAAA+AGG + chr6_2:3988972-3988991 None:intergenic 30.0%
TCTACAACATACTATACAGA+GGG + chr6_2:3989004-3989023 None:intergenic 30.0%
ATCTACAACATACTATACAG+AGG + chr6_2:3989005-3989024 None:intergenic 30.0%
AAAATGACCTATATTACAGG+GGG + chr6_2:3989083-3989102 None:intergenic 30.0%
GAAAATGACCTATATTACAG+GGG + chr6_2:3989084-3989103 None:intergenic 30.0%
CGAAAATGACCTATATTACA+GGG + chr6_2:3989085-3989104 None:intergenic 30.0%
!! CCTGTAATATAGGTCATTTT+CGG - chr6_2:3989083-3989102 Msa0905750:intron 30.0%
! TTTTTGAATGACCTATTAGG+GGG + chr6_2:3989226-3989245 None:intergenic 30.0%
! GTTTTTGAATGACCTATTAG+GGG + chr6_2:3989225-3989244 None:intergenic 30.0%
! GGTTTTTGAATGACCTATTA+GGG + chr6_2:3989224-3989243 None:intergenic 30.0%
! TGGTTTTTGAATGACCTATT+AGG + chr6_2:3989223-3989242 None:intergenic 30.0%
! TGGTTTTTGAATGACCTATT+AGG - chr6_2:3989223-3989242 Msa0905750:CDS 30.0%
! GGTTTTTGAATGACCTATTA+GGG - chr6_2:3989224-3989243 Msa0905750:CDS 30.0%
! GTTTTTGAATGACCTATTAG+GGG - chr6_2:3989225-3989244 Msa0905750:CDS 30.0%
! TTTTTGAATGACCTATTAGG+GGG - chr6_2:3989226-3989245 Msa0905750:CDS 30.0%
! ACCTTTCTTTGACTTACTTT+GGG - chr6_2:3989377-3989396 Msa0905750:intron 30.0%
AATGGCATATAGCATGAATT+AGG - chr6_2:3989409-3989428 Msa0905750:intron 30.0%
!! GCTACACATCAATACTTTTT+CGG + chr6_2:3989465-3989484 None:intergenic 30.0%
ATTTGGAAATAACACGACTT+TGG + chr6_2:3989509-3989528 None:intergenic 30.0%
TAAAATTGCAAGCAAGATAG+AGG - chr6_2:3989772-3989791 Msa0905750:intron 30.0%
AAAATTGCAAGCAAGATAGA+GGG - chr6_2:3989773-3989792 Msa0905750:intron 30.0%
ACATAGTAATACTAGAACAG+TGG - chr6_2:3989831-3989850 Msa0905750:intron 30.0%
!!! TAGAACAGTGGTATTTTTTG+AGG - chr6_2:3989843-3989862 Msa0905750:intron 30.0%
!!! GTATTTTTTGAGGAAAAGAG+TGG - chr6_2:3989853-3989872 Msa0905750:intron 30.0%
TGGATGTGGTTAGAAAAAAT+GGG - chr6_2:3989873-3989892 Msa0905750:intron 30.0%
AGAATCCCGATTAATGTAAT+GGG + chr6_2:3990004-3990023 None:intergenic 30.0%
TAGAATCCCGATTAATGTAA+TGG + chr6_2:3990005-3990024 None:intergenic 30.0%
! AATCGTATATTCGACGATTT+TGG - chr6_2:3990055-3990074 Msa0905750:intron 30.0%
! ATCGTATATTCGACGATTTT+GGG - chr6_2:3990056-3990075 Msa0905750:intron 30.0%
!!! ACGATTTTGGGATTTAAATC+AGG - chr6_2:3990068-3990087 Msa0905750:intron 30.0%
! ACAATCAAACTTTTATCCTC+TGG - chr6_2:3990114-3990133 Msa0905750:intron 30.0%
GAGAAATTAGGAAAATCAAG+GGG + chr6_2:3990147-3990166 None:intergenic 30.0%
ACAGTAGTCATAGAGAAATT+AGG + chr6_2:3990159-3990178 None:intergenic 30.0%
!! AACATTTTAGCATGTTGTCA+GGG - chr6_2:3990203-3990222 Msa0905750:intron 30.0%
TAACAATCCAAGGAAATGAA+GGG + chr6_2:3990273-3990292 None:intergenic 30.0%
TTAACAATCCAAGGAAATGA+AGG + chr6_2:3990274-3990293 None:intergenic 30.0%
!!! ACTCTGAGACTCTTAATTTT+AGG - chr6_2:3990487-3990506 Msa0905750:intron 30.0%
!! CTTCAAGTTGGAAGATTAAT+TGG - chr6_2:3990608-3990627 Msa0905750:intron 30.0%
GACCAAAAAGAACAAAAACA+AGG + chr6_2:3990698-3990717 None:intergenic 30.0%
!! GTTCTTTTTGGTCAATTGAT+TGG - chr6_2:3990705-3990724 Msa0905750:intron 30.0%
TCATGAATATGCTAAACTCA+GGG + chr6_2:3990796-3990815 None:intergenic 30.0%
TTCATGAATATGCTAAACTC+AGG + chr6_2:3990797-3990816 None:intergenic 30.0%
GCAAAAGAAGCAAAAAGTTT+CGG - chr6_2:3990929-3990948 Msa0905750:intron 30.0%
! TTTTCTTCCTTTCAGAAAGA+TGG - chr6_2:3990993-3991012 Msa0905750:intron 30.0%
AATAAAGCCATCTTTCTGAA+AGG + chr6_2:3991003-3991022 None:intergenic 30.0%
AAGTTTACAGCCAAATATCA+AGG - chr6_2:3991092-3991111 Msa0905750:intron 30.0%
AGTTTACAGCCAAATATCAA+GGG - chr6_2:3991093-3991112 Msa0905750:intron 30.0%
! TTTGCTGTGAAAATACTATG+AGG - chr6_2:3991292-3991311 Msa0905750:intron 30.0%
ATACCTAATGCAATCACAAA+GGG + chr6_2:3991334-3991353 None:intergenic 30.0%
!! CGGTAATCTTTTCTATTTCT+TGG - chr6_2:3991519-3991538 Msa0905750:intron 30.0%
AATTTCTATATGGCTTATGC+TGG - chr6_2:3991595-3991614 Msa0905750:intron 30.0%
GAAATTAAAAACCATTCTCG+TGG - chr6_2:3991746-3991765 Msa0905750:intron 30.0%
TTGAATTTCAGCTCAAGTAA+AGG - chr6_2:3991867-3991886 Msa0905750:intron 30.0%
!!! TTTTTTTCTCCGAATTGTAG+TGG - chr6_2:3992032-3992051 Msa0905750:intron 30.0%
AAACTTTCACCACTACAATT+CGG + chr6_2:3992044-3992063 None:intergenic 30.0%
! GTTTCTCTTTGATTTACTGA+TGG - chr6_2:3992060-3992079 Msa0905750:intron 30.0%
TTATGACAAACATGTCTAGA+AGG - chr6_2:3992141-3992160 Msa0905750:CDS 30.0%
!! TTACCTGCATTCTATTTCTA+TGG - chr6_2:3992569-3992588 Msa0905750:five_prime_UTR 30.0%
AGAATGAGTAACGTGTTTGA+AGG - chr6_2:3988194-3988213 Msa0905750:CDS 35.0%
GTTCTGTGATTGATGCTTAT+TGG - chr6_2:3988321-3988340 Msa0905750:intron 35.0%
CCAAACGATTCATCTTTAAG+TGG + chr6_2:3988467-3988486 None:intergenic 35.0%
CCACTTAAAGATGAATCGTT+TGG - chr6_2:3988464-3988483 Msa0905750:intron 35.0%
GGAAACCCAAGTGTAAATAA+TGG - chr6_2:3988487-3988506 Msa0905750:intron 35.0%
GAAATGGGAAATCCAAAGTT+CGG + chr6_2:3988550-3988569 None:intergenic 35.0%
TTTCATGAACGATTCGTAAG+TGG + chr6_2:3988706-3988725 None:intergenic 35.0%
AGCTAATGATTGTTTCATCC+AGG + chr6_2:3988742-3988761 None:intergenic 35.0%
TAAGGCCCAAAAAAGAGAAT+AGG - chr6_2:3988828-3988847 Msa0905750:intron 35.0%
AAGGCCCAAAAAAGAGAATA+GGG - chr6_2:3988829-3988848 Msa0905750:intron 35.0%
!! AAGCGGTTTTGATATGGATA+TGG + chr6_2:3988919-3988938 None:intergenic 35.0%
!! CAAAACAAGCGGTTTTGATA+TGG + chr6_2:3988925-3988944 None:intergenic 35.0%
! CATATCAAAACCGCTTGTTT+TGG - chr6_2:3988923-3988942 Msa0905750:CDS 35.0%
CAAAATCCAACCAAAACAAG+CGG + chr6_2:3988936-3988955 None:intergenic 35.0%
ACTGGTTACAAAAAAAGGGA+TGG + chr6_2:3988967-3988986 None:intergenic 35.0%
! GTTTTTACCCCCTGTAATAT+AGG - chr6_2:3989073-3989092 Msa0905750:intron 35.0%
CCGAAAATGACCTATATTAC+AGG + chr6_2:3989086-3989105 None:intergenic 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG - chr6_2:3989159-3989178 Msa0905750:CDS 35.0%
! TTTTGAATGACCTATTAGGG+GGG + chr6_2:3989227-3989246 None:intergenic 35.0%
! TTTTGAATGACCTATTAGGG+GGG - chr6_2:3989227-3989246 Msa0905750:CDS 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG + chr6_2:3989159-3989178 None:intergenic 35.0%
TATTTGACAGGGTGTAAAAC+CGG - chr6_2:3989294-3989313 Msa0905750:CDS 35.0%
! GACCTTTCTTTGACTTACTT+TGG - chr6_2:3989376-3989395 Msa0905750:intron 35.0%
ACCCAAAGTAAGTCAAAGAA+AGG + chr6_2:3989381-3989400 None:intergenic 35.0%
! TTTGACTTACTTTGGGTAGT+TGG - chr6_2:3989384-3989403 Msa0905750:intron 35.0%
TACTTTGGGTAGTTGGATAA+TGG - chr6_2:3989391-3989410 Msa0905750:intron 35.0%
ATACATGCCAACAACTGAAA+GGG + chr6_2:3989436-3989455 None:intergenic 35.0%
!!! CACATCAATACTTTTTCGGA+AGG + chr6_2:3989461-3989480 None:intergenic 35.0%
!! AAGTATTGATGTGTAGCTTC+TGG - chr6_2:3989468-3989487 Msa0905750:intron 35.0%
TAATAGGAGCTAGAGAGATT+TGG + chr6_2:3989526-3989545 None:intergenic 35.0%
GTGGATGTGGTTAGAAAAAA+TGG - chr6_2:3989872-3989891 Msa0905750:intron 35.0%
GGATGTGGTTAGAAAAAATG+GGG - chr6_2:3989874-3989893 Msa0905750:intron 35.0%
! GTGTCATCTACACATGTTTT+GGG - chr6_2:3989965-3989984 Msa0905750:intron 35.0%
!! TAGGAAAATCAAGGGGTATT+AGG + chr6_2:3990140-3990159 None:intergenic 35.0%
!! CAACATTTTAGCATGTTGTC+AGG - chr6_2:3990202-3990221 Msa0905750:intron 35.0%
AGAGAATTATCACCCAACAT+CGG + chr6_2:3990348-3990367 None:intergenic 35.0%
CAGAGTCTACTAGAATGATT+TGG + chr6_2:3990473-3990492 None:intergenic 35.0%
CCAACTTGAAGAAACAAACA+TGG + chr6_2:3990599-3990618 None:intergenic 35.0%
! CCATGTTTGTTTCTTCAAGT+TGG - chr6_2:3990596-3990615 Msa0905750:intron 35.0%
!!! GCCCTTGTTTTTGTTCTTTT+TGG - chr6_2:3990693-3990712 Msa0905750:intron 35.0%
!! CTTTTTGGTCAATTGATTGG+TGG - chr6_2:3990708-3990727 Msa0905750:intron 35.0%
! AGTGTGCATTTTACATGACA+AGG - chr6_2:3990754-3990773 Msa0905750:intron 35.0%
! GTGTGCATTTTACATGACAA+GGG - chr6_2:3990755-3990774 Msa0905750:intron 35.0%
GCAAAAAGTTTCGGAAGTAA+AGG - chr6_2:3990938-3990957 Msa0905750:intron 35.0%
!!! GATGGCTTTATTTTTTCTGC+AGG - chr6_2:3991011-3991030 Msa0905750:intron 35.0%
TACCTAATGCAATCACAAAG+GGG + chr6_2:3991333-3991352 None:intergenic 35.0%
GATACCTAATGCAATCACAA+AGG + chr6_2:3991335-3991354 None:intergenic 35.0%
GATTAATGACATCAACTGAG+AGG - chr6_2:3991372-3991391 Msa0905750:intron 35.0%
! AATAGAAACACCTAGCTCTT+CGG + chr6_2:3991450-3991469 None:intergenic 35.0%
TGGTCATGATTATGAGTTTC+TGG - chr6_2:3991539-3991558 Msa0905750:intron 35.0%
GCTTATGCTGGAAATTTCTT+GGG - chr6_2:3991607-3991626 Msa0905750:intron 35.0%
! ATCTCTCAATTTTCGACATC+TGG - chr6_2:3991701-3991720 Msa0905750:intron 35.0%
! TCTCTCAATTTTCGACATCT+GGG - chr6_2:3991702-3991721 Msa0905750:intron 35.0%
AATTTCAGCTCAAGTAAAGG+TGG - chr6_2:3991870-3991889 Msa0905750:intron 35.0%
ATTTCAGCTCAAGTAAAGGT+GGG - chr6_2:3991871-3991890 Msa0905750:intron 35.0%
TAAAACATGGACGACATATC+GGG + chr6_2:3991897-3991916 None:intergenic 35.0%
CTAAAACATGGACGACATAT+CGG + chr6_2:3991898-3991917 None:intergenic 35.0%
! AACCTTTTGGACCTAAAACA+TGG + chr6_2:3991910-3991929 None:intergenic 35.0%
CTTTGTGTATAGTTGGATCA+TGG - chr6_2:3991959-3991978 Msa0905750:intron 35.0%
AACAAGAACAAGTGGATCAT+TGG - chr6_2:3992167-3992186 Msa0905750:CDS 35.0%
!! GCAAGTTAACTTGATGATGT+TGG - chr6_2:3992378-3992397 Msa0905750:intron 35.0%
TTACAAAACCAGATTCTTCG+TGG - chr6_2:3992499-3992518 Msa0905750:five_prime_UTR 35.0%
ACACCATAGAAATAGAATGC+AGG + chr6_2:3992575-3992594 None:intergenic 35.0%
CAACACCAAACTTCTCCTTT+CGG - chr6_2:3987853-3987872 Msa0905750:three_prime_UTR 40.0%
AAGTTCCGAAAGGAGAAGTT+TGG + chr6_2:3987861-3987880 None:intergenic 40.0%
TTCCCATTTCTTAGAAACGG+TGG - chr6_2:3988560-3988579 Msa0905750:intron 40.0%
TCCCATTTCTTAGAAACGGT+GGG - chr6_2:3988561-3988580 Msa0905750:intron 40.0%
! ACCCACCGTTTCTAAGAAAT+GGG + chr6_2:3988565-3988584 None:intergenic 40.0%
! AACCCACCGTTTCTAAGAAA+TGG + chr6_2:3988566-3988585 None:intergenic 40.0%
GGGTTAAGACCTATGAAATC+CGG - chr6_2:3988581-3988600 Msa0905750:intron 40.0%
ACTACGTATCCGGATTTCAT+AGG + chr6_2:3988593-3988612 None:intergenic 40.0%
GTAACGTCATACTACGTATC+CGG + chr6_2:3988603-3988622 None:intergenic 40.0%
!!! TCAAAACCGCTTGTTTTGGT+TGG - chr6_2:3988927-3988946 Msa0905750:CDS 40.0%
ATACTATACAGAGGGTTCTG+CGG + chr6_2:3988996-3989015 None:intergenic 40.0%
CCTGTAATACAGGTCATTTC+CGG + chr6_2:3989316-3989335 None:intergenic 40.0%
CGGAAATGACCTGTATTACA+GGG - chr6_2:3989314-3989333 Msa0905750:CDS 40.0%
GGAAATGACCTGTATTACAG+GGG - chr6_2:3989315-3989334 Msa0905750:CDS 40.0%
GAAATGACCTGTATTACAGG+GGG - chr6_2:3989316-3989335 Msa0905750:CDS 40.0%
AAATGACCTGTATTACAGGG+GGG - chr6_2:3989317-3989336 Msa0905750:CDS 40.0%
ATTAGGACCCTTTCAGTTGT+TGG - chr6_2:3989426-3989445 Msa0905750:CDS 40.0%
GATACATGCCAACAACTGAA+AGG + chr6_2:3989437-3989456 None:intergenic 40.0%
CCAGGTGTATTTATAGCATC+AGG + chr6_2:3989624-3989643 None:intergenic 40.0%
CCTGATGCTATAAATACACC+TGG - chr6_2:3989621-3989640 Msa0905750:intron 40.0%
! ATGCTTTTAAGCGGAAGCAA+AGG - chr6_2:3989647-3989666 Msa0905750:intron 40.0%
GAGATCGTAACCAAGATTGA+AGG - chr6_2:3989699-3989718 Msa0905750:intron 40.0%
TGGGTAAGATCCTTCAATCT+TGG + chr6_2:3989712-3989731 None:intergenic 40.0%
TTTGAGGAAAAGAGTGGATG+TGG - chr6_2:3989859-3989878 Msa0905750:intron 40.0%
!! GGTGTCATCTACACATGTTT+TGG - chr6_2:3989964-3989983 Msa0905750:intron 40.0%
!! CCGATTAATGTAATGGGCTT+GGG + chr6_2:3989998-3990017 None:intergenic 40.0%
CCCAAGCCCATTACATTAAT+CGG - chr6_2:3989995-3990014 Msa0905750:intron 40.0%
CCAAGCCCATTACATTAATC+GGG - chr6_2:3989996-3990015 Msa0905750:intron 40.0%
ATTCTATACGCGATCTGGAT+CGG - chr6_2:3990019-3990038 Msa0905750:intron 40.0%
AATCCAAGGAAATGAAGGGT+GGG + chr6_2:3990269-3990288 None:intergenic 40.0%
CATAACCAATTGCCGATGTT+GGG - chr6_2:3990333-3990352 Msa0905750:intron 40.0%
GAGGTGATGTCTTATAGTCT+TGG - chr6_2:3990446-3990465 Msa0905750:intron 40.0%
CAAGGTCTGACACAATAGTA+AGG + chr6_2:3990565-3990584 None:intergenic 40.0%
CTTACTATTGTGTCAGACCT+TGG - chr6_2:3990563-3990582 Msa0905750:intron 40.0%
AACATGGCATAGAGATTCCA+AGG + chr6_2:3990583-3990602 None:intergenic 40.0%
!! TGATTGGTGGAAGCATTGTA+AGG - chr6_2:3990721-3990740 Msa0905750:intron 40.0%
AAAGTTTCGGAAGTAAAGGC+TGG - chr6_2:3990942-3990961 Msa0905750:intron 40.0%
AATTGATGAAGCAGAGGCTT+TGG - chr6_2:3990965-3990984 Msa0905750:intron 40.0%
GATTCGAAAAATGGACCTTG+AGG - chr6_2:3991065-3991084 Msa0905750:intron 40.0%
! AGAAGTACGCCCTTGATATT+TGG + chr6_2:3991105-3991124 None:intergenic 40.0%
GAAACTTGAATCCTTCTGCA+CGG - chr6_2:3991193-3991212 Msa0905750:intron 40.0%
AAACTTGAATCCTTCTGCAC+GGG - chr6_2:3991194-3991213 Msa0905750:intron 40.0%
TGAATTGTTGGAATCAGGCA+TGG - chr6_2:3991218-3991237 Msa0905750:intron 40.0%
ATCCCCTTTGTGATTGCATT+AGG - chr6_2:3991328-3991347 Msa0905750:intron 40.0%
GTGAACGAGTTAAGGATAGT+AGG - chr6_2:3991408-3991427 Msa0905750:intron 40.0%
GGATAGTAGGAGAACAATGT+TGG - chr6_2:3991421-3991440 Msa0905750:intron 40.0%
GTCGCTGTGAATGTAAATCT+TGG + chr6_2:3991475-3991494 None:intergenic 40.0%
TCTACTGCATGCTCATAACA+CGG - chr6_2:3991499-3991518 Msa0905750:intron 40.0%
GGCTTATGCTGGAAATTTCT+TGG - chr6_2:3991606-3991625 Msa0905750:intron 40.0%
! CACTCAACAACTTGAGCTTT+TGG - chr6_2:3991772-3991791 Msa0905750:intron 40.0%
! CGATATGTCGTCCATGTTTT+AGG - chr6_2:3991896-3991915 Msa0905750:intron 40.0%
!! GTCCATGTTTTAGGTCCAAA+AGG - chr6_2:3991905-3991924 Msa0905750:intron 40.0%
GAAGGATGAACAAGAACAAG+TGG - chr6_2:3992159-3992178 Msa0905750:CDS 40.0%
TAGCAATGATAGCAACAACC+AGG + chr6_2:3992208-3992227 None:intergenic 40.0%
GAACCAATATGAGGACAAGT+AGG + chr6_2:3992265-3992284 None:intergenic 40.0%
!! ATGATGTTGGCTTCGTTGAA+GGG - chr6_2:3992391-3992410 Msa0905750:intron 40.0%
CAATGGCATGTGTCTTATGT+CGG - chr6_2:3992418-3992437 Msa0905750:intron 40.0%
AATGGCATGTGTCTTATGTC+GGG - chr6_2:3992419-3992438 Msa0905750:intron 40.0%
!! CGAAAGGAGAAGTTTGGTGT+TGG + chr6_2:3987855-3987874 None:intergenic 45.0%
AATTGACCGGAGAATGGTTG+CGG + chr6_2:3987884-3987903 None:intergenic 45.0%
ACTGCAGCTACAGCTCTTAA+TGG - chr6_2:3988266-3988285 Msa0905750:CDS 45.0%
ACTTTCTCCTGACCGAACTT+TGG - chr6_2:3988535-3988554 Msa0905750:intron 45.0%
CTTATCTCATGTCCGAACTC+TGG - chr6_2:3988770-3988789 Msa0905750:intron 45.0%
GACACTGGTAATCCAGAGTT+CGG + chr6_2:3988785-3988804 None:intergenic 45.0%
! GTTTCTAGAGAATGCGACAC+TGG + chr6_2:3988800-3988819 None:intergenic 45.0%
! TCGCATTCTCTAGAAACCAG+AGG - chr6_2:3988803-3988822 Msa0905750:intron 45.0%
! CGCATTCTCTAGAAACCAGA+GGG - chr6_2:3988804-3988823 Msa0905750:intron 45.0%
! CTCTAGAAACCAGAGGGTTA+AGG - chr6_2:3988810-3988829 Msa0905750:intron 45.0%
!!! TTTTTTGGGCCTTAACCCTC+TGG + chr6_2:3988822-3988841 None:intergenic 45.0%
CCGGAAATGACCTGTATTAC+AGG - chr6_2:3989313-3989332 Msa0905750:CDS 45.0%
! ACCTGGCGAATGCTTTTAAG+CGG - chr6_2:3989638-3989657 Msa0905750:intron 45.0%
!! CCCGATTAATGTAATGGGCT+TGG + chr6_2:3989999-3990018 None:intergenic 45.0%
CAAGAAACTTGGAGGGTTTC+AGG + chr6_2:3990242-3990261 None:intergenic 45.0%
CTGAAACCCTCCAAGTTTCT+TGG - chr6_2:3990240-3990259 Msa0905750:intron 45.0%
GGGAAACCAAGAAACTTGGA+GGG + chr6_2:3990249-3990268 None:intergenic 45.0%
TGGGAAACCAAGAAACTTGG+AGG + chr6_2:3990250-3990269 None:intergenic 45.0%
TTTCCCACCCTTCATTTCCT+TGG - chr6_2:3990263-3990282 Msa0905750:intron 45.0%
CAATCCAAGGAAATGAAGGG+TGG + chr6_2:3990270-3990289 None:intergenic 45.0%
CCAACATCGGCAATTGGTTA+TGG + chr6_2:3990335-3990354 None:intergenic 45.0%
CCATAACCAATTGCCGATGT+TGG - chr6_2:3990332-3990351 Msa0905750:intron 45.0%
TATCACCCAACATCGGCAAT+TGG + chr6_2:3990341-3990360 None:intergenic 45.0%
! TTGGGTGGGGAATGGTTTTT+GGG + chr6_2:3990662-3990681 None:intergenic 45.0%
! ATTGGGTGGGGAATGGTTTT+TGG + chr6_2:3990663-3990682 None:intergenic 45.0%
!! CAAGGGCATCAACCATGATT+GGG + chr6_2:3990680-3990699 None:intergenic 45.0%
!! ACAAGGGCATCAACCATGAT+TGG + chr6_2:3990681-3990700 None:intergenic 45.0%
GCTGTAAACTTCTTGCCTCA+AGG + chr6_2:3991083-3991102 None:intergenic 45.0%
GCGTACTTCTTGCTAAGTTG+CGG - chr6_2:3991115-3991134 Msa0905750:intron 45.0%
CGTACTTCTTGCTAAGTTGC+GGG - chr6_2:3991116-3991135 Msa0905750:intron 45.0%
AACAATTCATCCCGTGCAGA+AGG + chr6_2:3991207-3991226 None:intergenic 45.0%
TTCTGCACGGGATGAATTGT+TGG - chr6_2:3991206-3991225 Msa0905750:intron 45.0%
CGGGATGAATTGTTGGAATC+AGG - chr6_2:3991213-3991232 Msa0905750:intron 45.0%
AGGCATGGCAGATACTATGA+CGG - chr6_2:3991233-3991252 Msa0905750:intron 45.0%
ACTGAGAGGTTGAACAAGAC+TGG - chr6_2:3991386-3991405 Msa0905750:intron 45.0%
CAAGACTGGTGAACGAGTTA+AGG - chr6_2:3991400-3991419 Msa0905750:intron 45.0%
ATGTTGGAAACCGAAGAGCT+AGG - chr6_2:3991437-3991456 Msa0905750:intron 45.0%
TATGCTCACTTGCAGCTTCA+TGG - chr6_2:3992086-3992105 Msa0905750:intron 45.0%
CATGGCGTGGATGATAACAT+AGG - chr6_2:3992104-3992123 Msa0905750:intron 45.0%
AGGCCTACTTGTCCTCATAT+TGG - chr6_2:3992259-3992278 Msa0905750:intron 45.0%
!! GATGATGTTGGCTTCGTTGA+AGG - chr6_2:3992390-3992409 Msa0905750:intron 45.0%
CGACATAAGACACATGCCAT+TGG + chr6_2:3992420-3992439 None:intergenic 45.0%
CAGCATAACCACGAAGAATC+TGG + chr6_2:3992510-3992529 None:intergenic 45.0%
ATGGTTGCGGAAGTTCCGAA+AGG + chr6_2:3987871-3987890 None:intergenic 50.0%
GAACTTCCGCAACCATTCTC+CGG - chr6_2:3987875-3987894 Msa0905750:three_prime_UTR 50.0%
CGGGAAAATTGACCGGAGAA+TGG + chr6_2:3987890-3987909 None:intergenic 50.0%
GAAACGGCGGGAAAATTGAC+CGG + chr6_2:3987897-3987916 None:intergenic 50.0%
GACGGCGAAGGTTGAAGAAA+CGG + chr6_2:3987913-3987932 None:intergenic 50.0%
AGAGAGAGAGATCGTACGTG+CGG + chr6_2:3987955-3987974 None:intergenic 50.0%
GCAGCTACAGCTCTTAATGG+AGG - chr6_2:3988269-3988288 Msa0905750:CDS 50.0%
GGGAAATCCAAAGTTCGGTC+AGG + chr6_2:3988545-3988564 None:intergenic 50.0%
! AACCATTGACTGGGCTCAAG+TGG - chr6_2:3988670-3988689 Msa0905750:intron 50.0%
AACCACTTGAGCCCAGTCAA+TGG + chr6_2:3988675-3988694 None:intergenic 50.0%
AGGGTTCATAGGGTTGCTCA+TGG - chr6_2:3988865-3988884 Msa0905750:intron 50.0%
GCTTTACCCCCCTGTAATAC+AGG + chr6_2:3989326-3989345 None:intergenic 50.0%
!! TCCGCTTAAAAGCATTCGCC+AGG + chr6_2:3989642-3989661 None:intergenic 50.0%
AAGCGGAAGCAAAGGTTGTC+AGG - chr6_2:3989655-3989674 Msa0905750:intron 50.0%
AGCGGAAGCAAAGGTTGTCA+GGG - chr6_2:3989656-3989675 Msa0905750:intron 50.0%
!! ATGTAATGGGCTTGGGCGTT+TGG + chr6_2:3989991-3990010 None:intergenic 50.0%
TCGGGATTCTATACGCGATC+TGG - chr6_2:3990014-3990033 Msa0905750:intron 50.0%
!! ATCAAGGGGTATTAGGCCAG+AGG + chr6_2:3990133-3990152 None:intergenic 50.0%
GGGTGGGAAACCAAGAAACT+TGG + chr6_2:3990253-3990272 None:intergenic 50.0%
!! AATGGTTTTTGGGGGGAAGG+GGG + chr6_2:3990652-3990671 None:intergenic 50.0%
!! GAATGGTTTTTGGGGGGAAG+GGG + chr6_2:3990653-3990672 None:intergenic 50.0%
!! GGAATGGTTTTTGGGGGGAA+GGG + chr6_2:3990654-3990673 None:intergenic 50.0%
! TGGGTGGGGAATGGTTTTTG+GGG + chr6_2:3990661-3990680 None:intergenic 50.0%
AACCATTCCCCACCCAATCA+TGG - chr6_2:3990665-3990684 Msa0905750:intron 50.0%
AACCATGATTGGGTGGGGAA+TGG + chr6_2:3990670-3990689 None:intergenic 50.0%
GCATCAACCATGATTGGGTG+GGG + chr6_2:3990675-3990694 None:intergenic 50.0%
GGCATCAACCATGATTGGGT+GGG + chr6_2:3990676-3990695 None:intergenic 50.0%
GGCTGGAATTGATGAAGCAG+AGG - chr6_2:3990959-3990978 Msa0905750:intron 50.0%
GTTGAGTGAAGCCACGAGAA+TGG + chr6_2:3991760-3991779 None:intergenic 50.0%
CTTCGTTGAAGGGACACCAA+TGG - chr6_2:3992401-3992420 Msa0905750:intron 50.0%
GCGAAGGTTGAAGAAACGGC+GGG + chr6_2:3987909-3987928 None:intergenic 55.0%
GGCGAAGGTTGAAGAAACGG+CGG + chr6_2:3987910-3987929 None:intergenic 55.0%
AGGGTTCTGCGGTGAACAAC+TGG + chr6_2:3988985-3989004 None:intergenic 55.0%
GCGGAAGCAAAGGTTGTCAG+GGG - chr6_2:3989657-3989676 Msa0905750:intron 55.0%
!! GGGAATGGTTTTTGGGGGGA+AGG + chr6_2:3990655-3990674 None:intergenic 55.0%
!! GGTGGGGAATGGTTTTTGGG+GGG + chr6_2:3990659-3990678 None:intergenic 55.0%
!! GGGTGGGGAATGGTTTTTGG+GGG + chr6_2:3990660-3990679 None:intergenic 55.0%
GGGCATCAACCATGATTGGG+TGG + chr6_2:3990677-3990696 None:intergenic 55.0%
TCACTTGCAGCTTCATGGCG+TGG - chr6_2:3992091-3992110 Msa0905750:intron 55.0%
AGATCGTACGTGCGGTGGTC+GGG + chr6_2:3987947-3987966 None:intergenic 60.0%
GAGATCGTACGTGCGGTGGT+CGG + chr6_2:3987948-3987967 None:intergenic 60.0%
GAGAGAGATCGTACGTGCGG+TGG + chr6_2:3987952-3987971 None:intergenic 60.0%
TGGCTGCATTGTGCTCGTCC+TGG - chr6_2:3992187-3992206 Msa0905750:CDS 60.0%
GATCGTACGTGCGGTGGTCG+GGG + chr6_2:3987946-3987965 None:intergenic 65.0%
! GGAAGCGGAGGTGACGGCGA+AGG + chr6_2:3987925-3987944 None:intergenic 70.0%
GGTCGGGGAAGCGGAGGTGA+CGG + chr6_2:3987931-3987950 None:intergenic 70.0%
ACGTGCGGTGGTCGGGGAAG+CGG + chr6_2:3987940-3987959 None:intergenic 70.0%
TGCGGTGGTCGGGGAAGCGG+AGG + chr6_2:3987937-3987956 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 3987777 3992627 3987777 ID=Msa0905750;Name=Msa0905750
chr6_2 mRNA 3987777 3992627 3987777 ID=Msa0905750-mRNA-1;Parent=Msa0905750;Name=Msa0905750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=204|1|1|1|0.8|0.66|6|374|221
chr6_2 exon 3987777 3988303 3987777 ID=Msa0905750-mRNA-1:exon:1230;Parent=Msa0905750-mRNA-1
chr6_2 exon 3988884 3989054 3988884 ID=Msa0905750-mRNA-1:exon:1229;Parent=Msa0905750-mRNA-1
chr6_2 exon 3989150 3989338 3989150 ID=Msa0905750-mRNA-1:exon:1228;Parent=Msa0905750-mRNA-1
chr6_2 exon 3989418 3989476 3989418 ID=Msa0905750-mRNA-1:exon:1227;Parent=Msa0905750-mRNA-1
chr6_2 exon 3992114 3992230 3992114 ID=Msa0905750-mRNA-1:exon:1226;Parent=Msa0905750-mRNA-1
chr6_2 exon 3992447 3992627 3992447 ID=Msa0905750-mRNA-1:exon:1225;Parent=Msa0905750-mRNA-1
chr6_2 five_prime_UTR 3992447 3992627 3992447 ID=Msa0905750-mRNA-1:five_prime_utr;Parent=Msa0905750-mRNA-1
chr6_2 five_prime_UTR 3992208 3992230 3992208 ID=Msa0905750-mRNA-1:five_prime_utr;Parent=Msa0905750-mRNA-1
chr6_2 CDS 3992114 3992207 3992114 ID=Msa0905750-mRNA-1:cds;Parent=Msa0905750-mRNA-1
chr6_2 CDS 3989418 3989476 3989418 ID=Msa0905750-mRNA-1:cds;Parent=Msa0905750-mRNA-1
chr6_2 CDS 3989150 3989338 3989150 ID=Msa0905750-mRNA-1:cds;Parent=Msa0905750-mRNA-1
chr6_2 CDS 3988884 3989054 3988884 ID=Msa0905750-mRNA-1:cds;Parent=Msa0905750-mRNA-1
chr6_2 CDS 3988151 3988303 3988151 ID=Msa0905750-mRNA-1:cds;Parent=Msa0905750-mRNA-1
chr6_2 three_prime_UTR 3987777 3988150 3987777 ID=Msa0905750-mRNA-1:three_prime_utr;Parent=Msa0905750-mRNA-1
Gene Sequence

>Msa0905750

ATGAGTAACGTGTTTGAAGGATACGAACGTCAGTACTGTGAGCTTTCTGCTAATTTGTCAAAAAAATGCACTGCAGCTACAGCTCTTAATGGAGAGCAAAAGAAGCAAAAAGTTTCGGAAGTAAAGGCTGGAATTGATGAAGCAGAGGCTTTGATTCGAAAAATGGACCTTGAGGCAAGAAGTTTACAGCCAAATATCAAGGGCGTACTTCTTGCTAAGTTGCGGGAGTATAAATCAGATCTAAACAACCTTAAAAGTGAAGTTAAGAAAATTGTATCTGGAAACTTGAATCCTTCTGCACGGGATGAATTGTTGGAATCAGGCATGGCAGATACTATGACGGTATCAGCTGATCAGAGAACAAGATTAATGACATCAACTGAGAGGTTGAACAAGACTGGTGAACGAGTTAAGGATAGTAGGAGAACAATGTTGGAAACCGAAGAGCTAGGTGTTTCTATTCTCCAAGATTTACATTCACAGCGACAATCTCTACTGCATGCTCATAACACGCTTCATGGCGTGGATGATAACATAGGCAAGAGCAAGAAAATTATGACAAACATGTCTAGAAGGATGAACAAGAACAAGTGGATCATTGGCTGCATTGTGCTCGTCCTGGTTGTTGCTATCATTGCTATCCTATACTTCAAACTTGTTAAATAG

Protein sequence

>Msa0905750

MSNVFEGYERQYCELSANLSKKCTAATALNGEQKKQKVSEVKAGIDEAEALIRKMDLEARSLQPNIKGVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADTMTVSADQRTRLMTSTERLNKTGERVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIGKSKKIMTNMSRRMNKNKWIIGCIVLVLVVAIIAILYFKLVK*