AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0264690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264690 MtrunA17_Chr2g0328901 97.082 377 11 0 36 412 69 445 0.0 766
Msa0264690 MtrunA17_Chr1g0201951 47.645 361 162 8 49 384 92 450 1.24e-95 293
Msa0264690 MtrunA17_Chr6g0463911 46.450 338 154 4 67 378 105 441 1.52e-82 260
Msa0264690 MtrunA17_Chr1g0179561 60.248 161 58 3 48 207 94 249 1.98e-55 190
Msa0264690 MtrunA17_Chr1g0179561 41.441 111 61 1 274 380 371 481 1.44e-23 102
Msa0264690 MtrunA17_Chr7g0265561 58.025 162 62 3 47 207 73 229 2.89e-55 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0264690 AT1G21200.1 44.297 377 155 8 46 383 83 443 4.77e-87 271
Msa0264690 AT1G21200.2 44.297 377 155 8 46 383 83 443 4.77e-87 271
Msa0264690 AT1G76870.2 41.918 365 176 12 34 383 42 385 1.97e-72 232
Msa0264690 AT1G76870.1 41.918 365 176 12 34 383 42 385 1.97e-72 232
Msa0264690 AT1G76870.3 41.918 365 176 12 34 383 42 385 1.97e-72 232
Msa0264690 AT3G10040.1 44.444 216 99 4 2 207 37 241 4.61e-44 159

Find 111 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTTCTTTGTCTTGATCTT+TGG 0.197813 2_2:+64638758 None:intergenic
TGATCTTTGGCTTCGGAATA+TGG 0.307219 2_2:+64638771 None:intergenic
CAAGTCAAGATCATGACTAT+TGG 0.311830 2_2:+64637708 None:intergenic
TTCTCCCACGGAGACTTTGC+AGG 0.318216 2_2:+64637436 None:intergenic
ACCAATGGAGGTAGGGTCTA+AGG 0.337698 2_2:+64637177 None:intergenic
GTGAGGAGGATGGCCACTTT+TGG 0.369260 2_2:-64637516 Msa0264690:CDS
GGAGAAAAGAGAGTGGATTA+AGG 0.381772 2_2:-64637419 Msa0264690:CDS
TTTGTCTTGATCTTTGGCTT+CGG 0.386120 2_2:+64638764 None:intergenic
GGATAGGGAGCTGGAGAAGC+TGG 0.386271 2_2:-64637296 Msa0264690:CDS
CGGAATATGGCATGAGTTTG+AGG 0.401989 2_2:+64638784 None:intergenic
TCCTGCATTGATGGATTCAA+TGG 0.411710 2_2:-64637833 Msa0264690:CDS
CTCTTCCATTGATCTCTCCT+TGG 0.417640 2_2:-64638713 Msa0264690:CDS
GAGGATGATGAGTTGGATAA+TGG 0.423042 2_2:-64637604 Msa0264690:CDS
AAGTCAAGATCATGACTATT+GGG 0.423237 2_2:+64637709 None:intergenic
GAAGTTCAAAAGCCCTGGCT+TGG 0.432989 2_2:+64637359 None:intergenic
GAGCATGGTTACGGAGAAGA+TGG 0.435266 2_2:-64638186 Msa0264690:CDS
GATGGTGTTAAGAAGAAATC+CGG 0.439201 2_2:-64638024 Msa0264690:CDS
ATCCGGGGTGTCACAGAAGA+AGG 0.448557 2_2:-64638007 Msa0264690:CDS
TGGTAGGGGAACTTGTTGTC+AGG 0.449451 2_2:-64637866 Msa0264690:CDS
TCTCCTTGGTACTCATCAAC+AGG 0.452859 2_2:-64638699 Msa0264690:intron
GAAGACGATGAGCATGGTTA+CGG 0.454149 2_2:-64638195 Msa0264690:CDS
GTGAGTTGTGTTGGTGATGA+TGG 0.455421 2_2:-64638063 Msa0264690:CDS
GAAGAAACTTGAGAGTGAAA+TGG 0.458951 2_2:-64637476 Msa0264690:CDS
GGAGAGATCAATGGAAGAGT+TGG 0.459881 2_2:+64638717 None:intergenic
GGTTGAGAATCCTGCATTGA+TGG 0.463782 2_2:-64637842 Msa0264690:CDS
GATACCGCAGCAAGAAGGAT+AGG 0.473004 2_2:-64637312 Msa0264690:CDS
TGACTTGCATAGTTATTCGT+TGG 0.479428 2_2:-64637692 Msa0264690:CDS
TTCAGAAACAGCGGTTTAAG+TGG 0.489001 2_2:-64637339 Msa0264690:CDS
ACCATTGAATCCATCAATGC+AGG 0.492133 2_2:+64637832 None:intergenic
AATATTAATGCACGTGGTGA+TGG 0.497668 2_2:-64637577 Msa0264690:CDS
GGTGATGGAGGGAGAATGGA+AGG 0.501886 2_2:-64637562 Msa0264690:CDS
TCTAAGATAATGATAAGTAA+AGG 0.502250 2_2:-64637967 Msa0264690:CDS
AATGGTTAACTTGTCTGCTA+AGG 0.514836 2_2:-64637815 Msa0264690:CDS
TTGTGGCCTCTTGATACCAA+TGG 0.514883 2_2:+64637162 None:intergenic
TCTCCCACGGAGACTTTGCA+GGG 0.516340 2_2:+64637437 None:intergenic
TCCTTAGACCCTACCTCCAT+TGG 0.518261 2_2:-64637178 Msa0264690:CDS
GGTTGAATGAGATGCTTGGT+AGG 0.519981 2_2:-64637882 Msa0264690:CDS
CATAGTTATTCGTTGGAACA+CGG 0.524019 2_2:-64637685 Msa0264690:CDS
AAAATGTTGACTTCCAAGCC+AGG 0.526284 2_2:-64637372 Msa0264690:CDS
CACTAGACTGCGGCCAAAAG+TGG 0.527780 2_2:+64637503 None:intergenic
TTTCTGAAGTTCAAAAGCCC+TGG 0.531742 2_2:+64637354 None:intergenic
GGTGATGATGGAACAATTAG+TGG 0.532799 2_2:-64638051 Msa0264690:CDS
TGCAATTTGAAAATGAGCAC+AGG 0.532921 2_2:-64637255 Msa0264690:CDS
CAGCAAGAAGGATAGGGAGC+TGG 0.539921 2_2:-64637305 Msa0264690:CDS
TGGGTATCCTTTGACCATTG+TGG 0.541818 2_2:+64637728 None:intergenic
ATTAATGCACGTGGTGATGG+AGG 0.542789 2_2:-64637574 Msa0264690:CDS
GAGTACCAAGGAGAGATCAA+TGG 0.545609 2_2:+64638708 None:intergenic
TAACTTGTCTGCTAAGGCTA+AGG 0.548373 2_2:-64637809 Msa0264690:CDS
TGAAGATAACAATGAAAGTG+AGG 0.549731 2_2:-64637623 Msa0264690:CDS
ATAGCAGTGGTGAGTTGTGT+TGG 0.551265 2_2:-64638072 Msa0264690:CDS
TAGGGGAACTTGTTGTCAGG+TGG 0.556404 2_2:-64637863 Msa0264690:CDS
TGAAAGTGAGGATGATGAGT+TGG 0.557152 2_2:-64637611 Msa0264690:CDS
AACTTGAGAGTGAAATGGCA+AGG 0.557312 2_2:-64637471 Msa0264690:CDS
GTTGAATGAGATGCTTGGTA+GGG 0.559093 2_2:-64637881 Msa0264690:CDS
TATCAAGAGGCCACAAGGGA+GGG 0.560647 2_2:-64637155 Msa0264690:CDS
ATACCGCAGCAAGAAGGATA+GGG 0.564239 2_2:-64637311 Msa0264690:CDS
AAAGCTGAAGCAGAGAGAGC+AGG 0.565355 2_2:-64637227 Msa0264690:CDS
TTGATATGTTCCCTCCCTTG+TGG 0.565958 2_2:+64637145 None:intergenic
GTCCACTTCATTCTCTGCCA+AGG 0.566514 2_2:+64638117 None:intergenic
ACTTGAATAAGAGATATAAG+AGG 0.568508 2_2:-64637903 Msa0264690:CDS
TGTCACAGAAGAAGGGTAAG+TGG 0.569426 2_2:-64637999 Msa0264690:CDS
TCTTGATACCAATGGAGGTA+GGG 0.573392 2_2:+64637170 None:intergenic
GGAGCTGGAGAAGCTGGCGA+TGG 0.574129 2_2:-64637290 Msa0264690:CDS
AAGAGGTTGAATGAGATGCT+TGG 0.576189 2_2:-64637886 Msa0264690:CDS
AGCAGGAGGCAGAGTTCAGT+AGG 0.578594 2_2:-64637210 Msa0264690:CDS
ATGGTGTTAAGAAGAAATCC+GGG 0.579854 2_2:-64638023 Msa0264690:CDS
CTCTTGATACCAATGGAGGT+AGG 0.581041 2_2:+64637169 None:intergenic
TTGAATGAGATGCTTGGTAG+GGG 0.587060 2_2:-64637880 Msa0264690:CDS
TAGAAATAAATTAAGTGAGG+AGG 0.587853 2_2:-64637530 Msa0264690:CDS
ACGTGGTGATGGAGGGAGAA+TGG 0.588300 2_2:-64637566 Msa0264690:CDS
ACCCTTCTTCTGTGACACCC+CGG 0.588573 2_2:+64638005 None:intergenic
TGATAGAAATAAATTAAGTG+AGG 0.588915 2_2:-64637533 Msa0264690:CDS
GTTAAGATACCGCAGCAAGA+AGG 0.589509 2_2:-64637317 Msa0264690:CDS
TTAATGCACGTGGTGATGGA+GGG 0.592885 2_2:-64637573 Msa0264690:CDS
AAATGTTGACTTCCAAGCCA+GGG 0.593930 2_2:-64637371 Msa0264690:CDS
ATAGTTATTCGTTGGAACAC+GGG 0.600371 2_2:-64637684 Msa0264690:CDS
TTATTCGTTGGAACACGGGA+AGG 0.601197 2_2:-64637680 Msa0264690:CDS
GTGCATACCACAATGGTCAA+AGG 0.603169 2_2:-64637735 Msa0264690:CDS
TGATGGAACAATTAGTGGTG+TGG 0.604354 2_2:-64638046 Msa0264690:CDS
ACTTGAGAGTGAAATGGCAA+GGG 0.606060 2_2:-64637470 Msa0264690:CDS
AGTGGACGGATAATGTGGTT+GGG 0.610749 2_2:-64638101 Msa0264690:CDS
AAGTGGACGGATAATGTGGT+TGG 0.613391 2_2:-64638102 Msa0264690:CDS
GTATCAAGAGGCCACAAGGG+AGG 0.615865 2_2:-64637156 Msa0264690:CDS
AACTTATCCTCACACTGCTG+CGG 0.618536 2_2:+64637931 None:intergenic
CTACCTCCATTGGTATCAAG+AGG 0.620308 2_2:-64637168 Msa0264690:CDS
AGCATGGTTACGGAGAAGAT+GGG 0.623013 2_2:-64638185 Msa0264690:CDS
AGACCCTGCAAAGTCTCCGT+GGG 0.624160 2_2:-64637440 Msa0264690:CDS
GGAACAATTAGTGGTGTGGA+TGG 0.625621 2_2:-64638042 Msa0264690:CDS
AATAAATTAAGTGAGGAGGA+TGG 0.626359 2_2:-64637526 Msa0264690:CDS
AATGAAGTGGACGGATAATG+TGG 0.631463 2_2:-64638106 Msa0264690:CDS
AGGGAGGGAACATATCAACT+TGG 0.631664 2_2:-64637140 Msa0264690:CDS
CTCCTTGGCAGAGAATGAAG+TGG 0.631774 2_2:-64638119 Msa0264690:CDS
TGTGTCGCCGCAGCAGTGTG+AGG 0.632288 2_2:-64637938 Msa0264690:CDS
GCTCCCTATCCTTCTTGCTG+CGG 0.632768 2_2:+64637308 None:intergenic
GGTTGGGCTTCTTATAGCAG+TGG 0.632989 2_2:-64638085 Msa0264690:CDS
ATTGGTATCAAGAGGCCACA+AGG 0.633070 2_2:-64637160 Msa0264690:CDS
TTCTTCATCCCACTAGACTG+CGG 0.642211 2_2:+64637493 None:intergenic
GCTGAAGCAGAGAGAGCAGG+AGG 0.642379 2_2:-64637224 Msa0264690:CDS
ATGAGCGAAGACGATGAGCA+TGG 0.644222 2_2:-64638201 Msa0264690:CDS
TTGGCAGAGAATGAAGTGGA+CGG 0.645694 2_2:-64638115 Msa0264690:CDS
CTCCGTGGGAGAAAAGAGAG+TGG 0.647688 2_2:-64637426 Msa0264690:CDS
AAGACCCTGCAAAGTCTCCG+TGG 0.649124 2_2:-64637441 Msa0264690:CDS
TGGCCTCTTGATACCAATGG+AGG 0.649145 2_2:+64637165 None:intergenic
GTGATGGAGGGAGAATGGAA+GGG 0.653559 2_2:-64637561 Msa0264690:CDS
TCCGGGGTGTCACAGAAGAA+GGG 0.653871 2_2:-64638006 Msa0264690:CDS
TTGGTATCAAGAGGCCACAA+GGG 0.674612 2_2:-64637159 Msa0264690:CDS
GAAATGTGTGCATACCACAA+TGG 0.676978 2_2:-64637742 Msa0264690:CDS
GGAATTAATATTAATGCACG+TGG 0.680730 2_2:-64637583 Msa0264690:CDS
ATACCTGTTGATGAGTACCA+AGG 0.722292 2_2:+64638696 None:intergenic
TGGTGTTAAGAAGAAATCCG+GGG 0.737936 2_2:-64638022 Msa0264690:CDS
AAGGACTCAAGAGATCACGA+TGG 0.786747 2_2:-64637661 Msa0264690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATTTATTATTATGTCTT+CGG - chr2_2:64637334-64637353 Msa0264690:CDS 15.0%
!! GATGATAATAATAATCAAAT+TGG - chr2_2:64637678-64637697 Msa0264690:CDS 15.0%
!!! AAAAATTTGAATTTTGGTAA+AGG - chr2_2:64637714-64637733 Msa0264690:CDS 15.0%
!! TTCATTTATTATTATGTCTT+CGG - chr2_2:64637334-64637353 Msa0264690:CDS 15.0%
!! GATGATAATAATAATCAAAT+TGG - chr2_2:64637678-64637697 Msa0264690:CDS 15.0%
!!! AAAAATTTGAATTTTGGTAA+AGG - chr2_2:64637714-64637733 Msa0264690:CDS 15.0%
!! AATTGTGTTTCAATTATGAA+TGG - chr2_2:64637513-64637532 Msa0264690:CDS 20.0%
!!! GAAGTGAAAAATTTGAATTT+TGG - chr2_2:64637708-64637727 Msa0264690:CDS 20.0%
!!! TCTAAGATAATGATAAGTAA+AGG - chr2_2:64638011-64638030 Msa0264690:CDS 20.0%
!! TGATAGAAATAAATTAAGTG+AGG - chr2_2:64638445-64638464 Msa0264690:intron 20.0%
!! AATTGTGTTTCAATTATGAA+TGG - chr2_2:64637513-64637532 Msa0264690:CDS 20.0%
!!! GAAGTGAAAAATTTGAATTT+TGG - chr2_2:64637708-64637727 Msa0264690:CDS 20.0%
!!! TCTAAGATAATGATAAGTAA+AGG - chr2_2:64638011-64638030 Msa0264690:CDS 20.0%
!! TGATAGAAATAAATTAAGTG+AGG - chr2_2:64638445-64638464 Msa0264690:intron 20.0%
!!! ACTTTTCTCTTTTTAAGACA+AGG + chr2_2:64637141-64637160 None:intergenic 25.0%
! AACCCTAATTTCTAAATTCT+CGG + chr2_2:64637489-64637508 None:intergenic 25.0%
! CAACATATGAATATGATAAC+TGG - chr2_2:64637645-64637664 Msa0264690:CDS 25.0%
! TATGAATATGATAACTGGTT+TGG - chr2_2:64637650-64637669 Msa0264690:CDS 25.0%
!!! TTTGAATTTTGGTAAAGGAA+AGG - chr2_2:64637719-64637738 Msa0264690:CDS 25.0%
!!! TTGAATTTTGGTAAAGGAAA+GGG - chr2_2:64637720-64637739 Msa0264690:CDS 25.0%
! ACTTGAATAAGAGATATAAG+AGG - chr2_2:64638075-64638094 Msa0264690:CDS 25.0%
! TAGAAATAAATTAAGTGAGG+AGG - chr2_2:64638448-64638467 Msa0264690:intron 25.0%
!!! ACTTTTCTCTTTTTAAGACA+AGG + chr2_2:64637141-64637160 None:intergenic 25.0%
! AACCCTAATTTCTAAATTCT+CGG + chr2_2:64637489-64637508 None:intergenic 25.0%
! CAACATATGAATATGATAAC+TGG - chr2_2:64637645-64637664 Msa0264690:CDS 25.0%
! TATGAATATGATAACTGGTT+TGG - chr2_2:64637650-64637669 Msa0264690:CDS 25.0%
!!! TTTGAATTTTGGTAAAGGAA+AGG - chr2_2:64637719-64637738 Msa0264690:CDS 25.0%
!!! TTGAATTTTGGTAAAGGAAA+GGG - chr2_2:64637720-64637739 Msa0264690:CDS 25.0%
! ACTTGAATAAGAGATATAAG+AGG - chr2_2:64638075-64638094 Msa0264690:CDS 25.0%
! TAGAAATAAATTAAGTGAGG+AGG - chr2_2:64638448-64638467 Msa0264690:intron 25.0%
AAAGAAAAAAGGTCATGCTA+TGG + chr2_2:64637171-64637190 None:intergenic 30.0%
! GTTTGAGGTGTAAAGAAAAA+AGG + chr2_2:64637182-64637201 None:intergenic 30.0%
AGTTTCTTTGTCTTGATCTT+TGG + chr2_2:64637223-64637242 None:intergenic 30.0%
AAACAAAACAGCGCAAAATT+GGG + chr2_2:64637373-64637392 None:intergenic 30.0%
AAAACAAAACAGCGCAAAAT+TGG + chr2_2:64637374-64637393 None:intergenic 30.0%
CACCGAGAATTTAGAAATTA+GGG - chr2_2:64637484-64637503 Msa0264690:CDS 30.0%
TCAATTATGAATGGTTCTTC+TGG - chr2_2:64637522-64637541 Msa0264690:CDS 30.0%
!!! AATTGCGAGAATTTTTTCGA+TGG - chr2_2:64637816-64637835 Msa0264690:CDS 30.0%
AAGTCAAGATCATGACTATT+GGG + chr2_2:64638272-64638291 None:intergenic 30.0%
TGAAGATAACAATGAAAGTG+AGG - chr2_2:64638355-64638374 Msa0264690:intron 30.0%
GGAATTAATATTAATGCACG+TGG - chr2_2:64638395-64638414 Msa0264690:intron 30.0%
AATAAATTAAGTGAGGAGGA+TGG - chr2_2:64638452-64638471 Msa0264690:intron 30.0%
AAAGAAAAAAGGTCATGCTA+TGG + chr2_2:64637171-64637190 None:intergenic 30.0%
! GTTTGAGGTGTAAAGAAAAA+AGG + chr2_2:64637182-64637201 None:intergenic 30.0%
AGTTTCTTTGTCTTGATCTT+TGG + chr2_2:64637223-64637242 None:intergenic 30.0%
AAACAAAACAGCGCAAAATT+GGG + chr2_2:64637373-64637392 None:intergenic 30.0%
AAAACAAAACAGCGCAAAAT+TGG + chr2_2:64637374-64637393 None:intergenic 30.0%
CACCGAGAATTTAGAAATTA+GGG - chr2_2:64637484-64637503 Msa0264690:CDS 30.0%
TCAATTATGAATGGTTCTTC+TGG - chr2_2:64637522-64637541 Msa0264690:CDS 30.0%
!!! AATTGCGAGAATTTTTTCGA+TGG - chr2_2:64637816-64637835 Msa0264690:CDS 30.0%
AAGTCAAGATCATGACTATT+GGG + chr2_2:64638272-64638291 None:intergenic 30.0%
TGAAGATAACAATGAAAGTG+AGG - chr2_2:64638355-64638374 Msa0264690:intron 30.0%
GGAATTAATATTAATGCACG+TGG - chr2_2:64638395-64638414 Msa0264690:intron 30.0%
AATAAATTAAGTGAGGAGGA+TGG - chr2_2:64638452-64638471 Msa0264690:intron 30.0%
! TTTGTCTTGATCTTTGGCTT+CGG + chr2_2:64637217-64637236 None:intergenic 35.0%
! TTTCAGTTTTCCCAGTAGTA+CGG - chr2_2:64637440-64637459 Msa0264690:CDS 35.0%
AACTGAAATTCCGTACTACT+GGG + chr2_2:64637453-64637472 None:intergenic 35.0%
AAACTGAAATTCCGTACTAC+TGG + chr2_2:64637454-64637473 None:intergenic 35.0%
GCACCGAGAATTTAGAAATT+AGG - chr2_2:64637483-64637502 Msa0264690:CDS 35.0%
! TATGAATGGTTCTTCTGGTT+TGG - chr2_2:64637527-64637546 Msa0264690:CDS 35.0%
!! ATGAATGGTTCTTCTGGTTT+GGG - chr2_2:64637528-64637547 Msa0264690:CDS 35.0%
TGTTGTTGATGCCTATGAAA+TGG + chr2_2:64637603-64637622 None:intergenic 35.0%
!!! AATTTTTTCGATGGTGGGAA+GGG - chr2_2:64637825-64637844 Msa0264690:CDS 35.0%
! GATGGTGTTAAGAAGAAATC+CGG - chr2_2:64637954-64637973 Msa0264690:CDS 35.0%
! ATGGTGTTAAGAAGAAATCC+GGG - chr2_2:64637955-64637974 Msa0264690:CDS 35.0%
!! AATGGTTAACTTGTCTGCTA+AGG - chr2_2:64638163-64638182 Msa0264690:CDS 35.0%
CAAGTCAAGATCATGACTAT+TGG + chr2_2:64638273-64638292 None:intergenic 35.0%
! TGACTTGCATAGTTATTCGT+TGG - chr2_2:64638286-64638305 Msa0264690:intron 35.0%
CATAGTTATTCGTTGGAACA+CGG - chr2_2:64638293-64638312 Msa0264690:intron 35.0%
ATAGTTATTCGTTGGAACAC+GGG - chr2_2:64638294-64638313 Msa0264690:intron 35.0%
AATATTAATGCACGTGGTGA+TGG - chr2_2:64638401-64638420 Msa0264690:intron 35.0%
GAAGAAACTTGAGAGTGAAA+TGG - chr2_2:64638502-64638521 Msa0264690:intron 35.0%
! CTTTTGAACTTCAGAAACAG+CGG - chr2_2:64638630-64638649 Msa0264690:intron 35.0%
TGCAATTTGAAAATGAGCAC+AGG - chr2_2:64638723-64638742 Msa0264690:CDS 35.0%
! TTTGTCTTGATCTTTGGCTT+CGG + chr2_2:64637217-64637236 None:intergenic 35.0%
! TTTCAGTTTTCCCAGTAGTA+CGG - chr2_2:64637440-64637459 Msa0264690:CDS 35.0%
AACTGAAATTCCGTACTACT+GGG + chr2_2:64637453-64637472 None:intergenic 35.0%
AAACTGAAATTCCGTACTAC+TGG + chr2_2:64637454-64637473 None:intergenic 35.0%
GCACCGAGAATTTAGAAATT+AGG - chr2_2:64637483-64637502 Msa0264690:CDS 35.0%
! TATGAATGGTTCTTCTGGTT+TGG - chr2_2:64637527-64637546 Msa0264690:CDS 35.0%
!! ATGAATGGTTCTTCTGGTTT+GGG - chr2_2:64637528-64637547 Msa0264690:CDS 35.0%
TGTTGTTGATGCCTATGAAA+TGG + chr2_2:64637603-64637622 None:intergenic 35.0%
!!! AATTTTTTCGATGGTGGGAA+GGG - chr2_2:64637825-64637844 Msa0264690:CDS 35.0%
! GATGGTGTTAAGAAGAAATC+CGG - chr2_2:64637954-64637973 Msa0264690:CDS 35.0%
! ATGGTGTTAAGAAGAAATCC+GGG - chr2_2:64637955-64637974 Msa0264690:CDS 35.0%
!! AATGGTTAACTTGTCTGCTA+AGG - chr2_2:64638163-64638182 Msa0264690:CDS 35.0%
CAAGTCAAGATCATGACTAT+TGG + chr2_2:64638273-64638292 None:intergenic 35.0%
! TGACTTGCATAGTTATTCGT+TGG - chr2_2:64638286-64638305 Msa0264690:intron 35.0%
CATAGTTATTCGTTGGAACA+CGG - chr2_2:64638293-64638312 Msa0264690:intron 35.0%
ATAGTTATTCGTTGGAACAC+GGG - chr2_2:64638294-64638313 Msa0264690:intron 35.0%
AATATTAATGCACGTGGTGA+TGG - chr2_2:64638401-64638420 Msa0264690:intron 35.0%
GAAGAAACTTGAGAGTGAAA+TGG - chr2_2:64638502-64638521 Msa0264690:intron 35.0%
! CTTTTGAACTTCAGAAACAG+CGG - chr2_2:64638630-64638649 Msa0264690:intron 35.0%
TGCAATTTGAAAATGAGCAC+AGG - chr2_2:64638723-64638742 Msa0264690:CDS 35.0%
! TGATCTTTGGCTTCGGAATA+TGG + chr2_2:64637210-64637229 None:intergenic 40.0%
! ATACCTGTTGATGAGTACCA+AGG + chr2_2:64637285-64637304 None:intergenic 40.0%
ACAGCGCAAAATTGGGAAAA+AGG + chr2_2:64637366-64637385 None:intergenic 40.0%
ACCCTGAATCTCCATTTCAT+AGG - chr2_2:64637589-64637608 Msa0264690:CDS 40.0%
GCCTATGAAATGGAGATTCA+GGG + chr2_2:64637593-64637612 None:intergenic 40.0%
TGCCTATGAAATGGAGATTC+AGG + chr2_2:64637594-64637613 None:intergenic 40.0%
!!! TGCGAGAATTTTTTCGATGG+TGG - chr2_2:64637819-64637838 Msa0264690:CDS 40.0%
!!! GCGAGAATTTTTTCGATGGT+GGG - chr2_2:64637820-64637839 Msa0264690:CDS 40.0%
!!! GAATTTTTTCGATGGTGGGA+AGG - chr2_2:64637824-64637843 Msa0264690:CDS 40.0%
!!! ATTTTTTCGATGGTGGGAAG+GGG - chr2_2:64637826-64637845 Msa0264690:CDS 40.0%
AATGAAGTGGACGGATAATG+TGG - chr2_2:64637872-64637891 Msa0264690:CDS 40.0%
!! GGTGATGATGGAACAATTAG+TGG - chr2_2:64637927-64637946 Msa0264690:CDS 40.0%
TGATGGAACAATTAGTGGTG+TGG - chr2_2:64637932-64637951 Msa0264690:CDS 40.0%
! TGGTGTTAAGAAGAAATCCG+GGG - chr2_2:64637956-64637975 Msa0264690:CDS 40.0%
AAGAGGTTGAATGAGATGCT+TGG - chr2_2:64638092-64638111 Msa0264690:CDS 40.0%
GTTGAATGAGATGCTTGGTA+GGG - chr2_2:64638097-64638116 Msa0264690:CDS 40.0%
TTGAATGAGATGCTTGGTAG+GGG - chr2_2:64638098-64638117 Msa0264690:CDS 40.0%
!! TCCTGCATTGATGGATTCAA+TGG - chr2_2:64638145-64638164 Msa0264690:CDS 40.0%
ACCATTGAATCCATCAATGC+AGG + chr2_2:64638149-64638168 None:intergenic 40.0%
! TAACTTGTCTGCTAAGGCTA+AGG - chr2_2:64638169-64638188 Msa0264690:CDS 40.0%
GAAATGTGTGCATACCACAA+TGG - chr2_2:64638236-64638255 Msa0264690:CDS 40.0%
TGAAAGTGAGGATGATGAGT+TGG - chr2_2:64638367-64638386 Msa0264690:intron 40.0%
! GAGGATGATGAGTTGGATAA+TGG - chr2_2:64638374-64638393 Msa0264690:intron 40.0%
AACTTGAGAGTGAAATGGCA+AGG - chr2_2:64638507-64638526 Msa0264690:intron 40.0%
ACTTGAGAGTGAAATGGCAA+GGG - chr2_2:64638508-64638527 Msa0264690:intron 40.0%
!! GGAGAAAAGAGAGTGGATTA+AGG - chr2_2:64638559-64638578 Msa0264690:intron 40.0%
! GGAAGTCAACATTTTGCTCT+TGG + chr2_2:64638601-64638620 None:intergenic 40.0%
!! AAAATGTTGACTTCCAAGCC+AGG - chr2_2:64638606-64638625 Msa0264690:intron 40.0%
!! AAATGTTGACTTCCAAGCCA+GGG - chr2_2:64638607-64638626 Msa0264690:intron 40.0%
!! TTTCTGAAGTTCAAAAGCCC+TGG + chr2_2:64638627-64638646 None:intergenic 40.0%
TTCAGAAACAGCGGTTTAAG+TGG - chr2_2:64638639-64638658 Msa0264690:intron 40.0%
TCTTGATACCAATGGAGGTA+GGG + chr2_2:64638811-64638830 None:intergenic 40.0%
! TGATCTTTGGCTTCGGAATA+TGG + chr2_2:64637210-64637229 None:intergenic 40.0%
! ATACCTGTTGATGAGTACCA+AGG + chr2_2:64637285-64637304 None:intergenic 40.0%
ACAGCGCAAAATTGGGAAAA+AGG + chr2_2:64637366-64637385 None:intergenic 40.0%
ACCCTGAATCTCCATTTCAT+AGG - chr2_2:64637589-64637608 Msa0264690:CDS 40.0%
GCCTATGAAATGGAGATTCA+GGG + chr2_2:64637593-64637612 None:intergenic 40.0%
TGCCTATGAAATGGAGATTC+AGG + chr2_2:64637594-64637613 None:intergenic 40.0%
!!! TGCGAGAATTTTTTCGATGG+TGG - chr2_2:64637819-64637838 Msa0264690:CDS 40.0%
!!! GCGAGAATTTTTTCGATGGT+GGG - chr2_2:64637820-64637839 Msa0264690:CDS 40.0%
!!! GAATTTTTTCGATGGTGGGA+AGG - chr2_2:64637824-64637843 Msa0264690:CDS 40.0%
!!! ATTTTTTCGATGGTGGGAAG+GGG - chr2_2:64637826-64637845 Msa0264690:CDS 40.0%
AATGAAGTGGACGGATAATG+TGG - chr2_2:64637872-64637891 Msa0264690:CDS 40.0%
!! GGTGATGATGGAACAATTAG+TGG - chr2_2:64637927-64637946 Msa0264690:CDS 40.0%
TGATGGAACAATTAGTGGTG+TGG - chr2_2:64637932-64637951 Msa0264690:CDS 40.0%
! TGGTGTTAAGAAGAAATCCG+GGG - chr2_2:64637956-64637975 Msa0264690:CDS 40.0%
AAGAGGTTGAATGAGATGCT+TGG - chr2_2:64638092-64638111 Msa0264690:CDS 40.0%
GTTGAATGAGATGCTTGGTA+GGG - chr2_2:64638097-64638116 Msa0264690:CDS 40.0%
TTGAATGAGATGCTTGGTAG+GGG - chr2_2:64638098-64638117 Msa0264690:CDS 40.0%
!! TCCTGCATTGATGGATTCAA+TGG - chr2_2:64638145-64638164 Msa0264690:CDS 40.0%
ACCATTGAATCCATCAATGC+AGG + chr2_2:64638149-64638168 None:intergenic 40.0%
! TAACTTGTCTGCTAAGGCTA+AGG - chr2_2:64638169-64638188 Msa0264690:CDS 40.0%
GAAATGTGTGCATACCACAA+TGG - chr2_2:64638236-64638255 Msa0264690:CDS 40.0%
TGAAAGTGAGGATGATGAGT+TGG - chr2_2:64638367-64638386 Msa0264690:intron 40.0%
! GAGGATGATGAGTTGGATAA+TGG - chr2_2:64638374-64638393 Msa0264690:intron 40.0%
AACTTGAGAGTGAAATGGCA+AGG - chr2_2:64638507-64638526 Msa0264690:intron 40.0%
ACTTGAGAGTGAAATGGCAA+GGG - chr2_2:64638508-64638527 Msa0264690:intron 40.0%
!! GGAGAAAAGAGAGTGGATTA+AGG - chr2_2:64638559-64638578 Msa0264690:intron 40.0%
! GGAAGTCAACATTTTGCTCT+TGG + chr2_2:64638601-64638620 None:intergenic 40.0%
!! AAAATGTTGACTTCCAAGCC+AGG - chr2_2:64638606-64638625 Msa0264690:intron 40.0%
!! AAATGTTGACTTCCAAGCCA+GGG - chr2_2:64638607-64638626 Msa0264690:intron 40.0%
!! TTTCTGAAGTTCAAAAGCCC+TGG + chr2_2:64638627-64638646 None:intergenic 40.0%
TTCAGAAACAGCGGTTTAAG+TGG - chr2_2:64638639-64638658 Msa0264690:intron 40.0%
TCTTGATACCAATGGAGGTA+GGG + chr2_2:64638811-64638830 None:intergenic 40.0%
CGGAATATGGCATGAGTTTG+AGG + chr2_2:64637197-64637216 None:intergenic 45.0%
GGAGAGATCAATGGAAGAGT+TGG + chr2_2:64637264-64637283 None:intergenic 45.0%
CTCTTCCATTGATCTCTCCT+TGG - chr2_2:64637265-64637284 Msa0264690:CDS 45.0%
GAGTACCAAGGAGAGATCAA+TGG + chr2_2:64637273-64637292 None:intergenic 45.0%
TCTCCTTGGTACTCATCAAC+AGG - chr2_2:64637279-64637298 Msa0264690:CDS 45.0%
!! AATGGTTCTTCTGGTTTGGG+TGG - chr2_2:64637531-64637550 Msa0264690:CDS 45.0%
CAACAGACTCAGTTAGCTCA+TGG - chr2_2:64637618-64637637 Msa0264690:CDS 45.0%
GAAGACGATGAGCATGGTTA+CGG - chr2_2:64637783-64637802 Msa0264690:CDS 45.0%
AGCATGGTTACGGAGAAGAT+GGG - chr2_2:64637793-64637812 Msa0264690:CDS 45.0%
! ATGGTGGGAAGGGGAAAAAA+GGG - chr2_2:64637835-64637854 Msa0264690:CDS 45.0%
TTGGCAGAGAATGAAGTGGA+CGG - chr2_2:64637863-64637882 Msa0264690:CDS 45.0%
AAGTGGACGGATAATGTGGT+TGG - chr2_2:64637876-64637895 Msa0264690:CDS 45.0%
AGTGGACGGATAATGTGGTT+GGG - chr2_2:64637877-64637896 Msa0264690:CDS 45.0%
ATAGCAGTGGTGAGTTGTGT+TGG - chr2_2:64637906-64637925 Msa0264690:CDS 45.0%
!! GTGAGTTGTGTTGGTGATGA+TGG - chr2_2:64637915-64637934 Msa0264690:CDS 45.0%
GGAACAATTAGTGGTGTGGA+TGG - chr2_2:64637936-64637955 Msa0264690:CDS 45.0%
TGTCACAGAAGAAGGGTAAG+TGG - chr2_2:64637979-64637998 Msa0264690:CDS 45.0%
AACTTATCCTCACACTGCTG+CGG + chr2_2:64638050-64638069 None:intergenic 45.0%
GGTTGAATGAGATGCTTGGT+AGG - chr2_2:64638096-64638115 Msa0264690:CDS 45.0%
GGTTGAGAATCCTGCATTGA+TGG - chr2_2:64638136-64638155 Msa0264690:CDS 45.0%
GTGCATACCACAATGGTCAA+AGG - chr2_2:64638243-64638262 Msa0264690:intron 45.0%
TGGGTATCCTTTGACCATTG+TGG + chr2_2:64638253-64638272 None:intergenic 45.0%
TTATTCGTTGGAACACGGGA+AGG - chr2_2:64638298-64638317 Msa0264690:intron 45.0%
AAGGACTCAAGAGATCACGA+TGG - chr2_2:64638317-64638336 Msa0264690:intron 45.0%
!! ATTAATGCACGTGGTGATGG+AGG - chr2_2:64638404-64638423 Msa0264690:intron 45.0%
!! TTAATGCACGTGGTGATGGA+GGG - chr2_2:64638405-64638424 Msa0264690:intron 45.0%
TTCTTCATCCCACTAGACTG+CGG + chr2_2:64638488-64638507 None:intergenic 45.0%
! ATCCACTCTCTTTTCTCCCA+CGG + chr2_2:64638557-64638576 None:intergenic 45.0%
GTTAAGATACCGCAGCAAGA+AGG - chr2_2:64638661-64638680 Msa0264690:intron 45.0%
ATACCGCAGCAAGAAGGATA+GGG - chr2_2:64638667-64638686 Msa0264690:intron 45.0%
CTCTTGATACCAATGGAGGT+AGG + chr2_2:64638812-64638831 None:intergenic 45.0%
CTACCTCCATTGGTATCAAG+AGG - chr2_2:64638810-64638829 Msa0264690:five_prime_UTR 45.0%
TTGTGGCCTCTTGATACCAA+TGG + chr2_2:64638819-64638838 None:intergenic 45.0%
ATTGGTATCAAGAGGCCACA+AGG - chr2_2:64638818-64638837 Msa0264690:five_prime_UTR 45.0%
TTGGTATCAAGAGGCCACAA+GGG - chr2_2:64638819-64638838 Msa0264690:five_prime_UTR 45.0%
TTGATATGTTCCCTCCCTTG+TGG + chr2_2:64638836-64638855 None:intergenic 45.0%
AGGGAGGGAACATATCAACT+TGG - chr2_2:64638838-64638857 Msa0264690:five_prime_UTR 45.0%
CGGAATATGGCATGAGTTTG+AGG + chr2_2:64637197-64637216 None:intergenic 45.0%
GGAGAGATCAATGGAAGAGT+TGG + chr2_2:64637264-64637283 None:intergenic 45.0%
CTCTTCCATTGATCTCTCCT+TGG - chr2_2:64637265-64637284 Msa0264690:CDS 45.0%
GAGTACCAAGGAGAGATCAA+TGG + chr2_2:64637273-64637292 None:intergenic 45.0%
TCTCCTTGGTACTCATCAAC+AGG - chr2_2:64637279-64637298 Msa0264690:CDS 45.0%
!! AATGGTTCTTCTGGTTTGGG+TGG - chr2_2:64637531-64637550 Msa0264690:CDS 45.0%
CAACAGACTCAGTTAGCTCA+TGG - chr2_2:64637618-64637637 Msa0264690:CDS 45.0%
GAAGACGATGAGCATGGTTA+CGG - chr2_2:64637783-64637802 Msa0264690:CDS 45.0%
AGCATGGTTACGGAGAAGAT+GGG - chr2_2:64637793-64637812 Msa0264690:CDS 45.0%
! ATGGTGGGAAGGGGAAAAAA+GGG - chr2_2:64637835-64637854 Msa0264690:CDS 45.0%
TTGGCAGAGAATGAAGTGGA+CGG - chr2_2:64637863-64637882 Msa0264690:CDS 45.0%
AAGTGGACGGATAATGTGGT+TGG - chr2_2:64637876-64637895 Msa0264690:CDS 45.0%
AGTGGACGGATAATGTGGTT+GGG - chr2_2:64637877-64637896 Msa0264690:CDS 45.0%
ATAGCAGTGGTGAGTTGTGT+TGG - chr2_2:64637906-64637925 Msa0264690:CDS 45.0%
!! GTGAGTTGTGTTGGTGATGA+TGG - chr2_2:64637915-64637934 Msa0264690:CDS 45.0%
GGAACAATTAGTGGTGTGGA+TGG - chr2_2:64637936-64637955 Msa0264690:CDS 45.0%
TGTCACAGAAGAAGGGTAAG+TGG - chr2_2:64637979-64637998 Msa0264690:CDS 45.0%
AACTTATCCTCACACTGCTG+CGG + chr2_2:64638050-64638069 None:intergenic 45.0%
GGTTGAATGAGATGCTTGGT+AGG - chr2_2:64638096-64638115 Msa0264690:CDS 45.0%
GGTTGAGAATCCTGCATTGA+TGG - chr2_2:64638136-64638155 Msa0264690:CDS 45.0%
GTGCATACCACAATGGTCAA+AGG - chr2_2:64638243-64638262 Msa0264690:intron 45.0%
TGGGTATCCTTTGACCATTG+TGG + chr2_2:64638253-64638272 None:intergenic 45.0%
TTATTCGTTGGAACACGGGA+AGG - chr2_2:64638298-64638317 Msa0264690:intron 45.0%
AAGGACTCAAGAGATCACGA+TGG - chr2_2:64638317-64638336 Msa0264690:intron 45.0%
!! ATTAATGCACGTGGTGATGG+AGG - chr2_2:64638404-64638423 Msa0264690:intron 45.0%
!! TTAATGCACGTGGTGATGGA+GGG - chr2_2:64638405-64638424 Msa0264690:intron 45.0%
TTCTTCATCCCACTAGACTG+CGG + chr2_2:64638488-64638507 None:intergenic 45.0%
! ATCCACTCTCTTTTCTCCCA+CGG + chr2_2:64638557-64638576 None:intergenic 45.0%
GTTAAGATACCGCAGCAAGA+AGG - chr2_2:64638661-64638680 Msa0264690:intron 45.0%
ATACCGCAGCAAGAAGGATA+GGG - chr2_2:64638667-64638686 Msa0264690:intron 45.0%
CTCTTGATACCAATGGAGGT+AGG + chr2_2:64638812-64638831 None:intergenic 45.0%
CTACCTCCATTGGTATCAAG+AGG - chr2_2:64638810-64638829 Msa0264690:five_prime_UTR 45.0%
TTGTGGCCTCTTGATACCAA+TGG + chr2_2:64638819-64638838 None:intergenic 45.0%
ATTGGTATCAAGAGGCCACA+AGG - chr2_2:64638818-64638837 Msa0264690:five_prime_UTR 45.0%
TTGGTATCAAGAGGCCACAA+GGG - chr2_2:64638819-64638838 Msa0264690:five_prime_UTR 45.0%
TTGATATGTTCCCTCCCTTG+TGG + chr2_2:64638836-64638855 None:intergenic 45.0%
AGGGAGGGAACATATCAACT+TGG - chr2_2:64638838-64638857 Msa0264690:five_prime_UTR 45.0%
!! GTTCTTCTGGTTTGGGTGGT+GGG - chr2_2:64637535-64637554 Msa0264690:CDS 50.0%
!!! TTGGGTGGTGGGTTTTTGAG+TGG - chr2_2:64637546-64637565 Msa0264690:CDS 50.0%
ATGAGCGAAGACGATGAGCA+TGG - chr2_2:64637777-64637796 Msa0264690:CDS 50.0%
GAGCATGGTTACGGAGAAGA+TGG - chr2_2:64637792-64637811 Msa0264690:CDS 50.0%
!! GATGGTGGGAAGGGGAAAAA+AGG - chr2_2:64637834-64637853 Msa0264690:CDS 50.0%
AGGGGAAAAAAGGGTCTCCT+TGG - chr2_2:64637844-64637863 Msa0264690:CDS 50.0%
CTCCTTGGCAGAGAATGAAG+TGG - chr2_2:64637859-64637878 Msa0264690:CDS 50.0%
GTCCACTTCATTCTCTGCCA+AGG + chr2_2:64637864-64637883 None:intergenic 50.0%
GGTTGGGCTTCTTATAGCAG+TGG - chr2_2:64637893-64637912 Msa0264690:CDS 50.0%
!! TGGTAGGGGAACTTGTTGTC+AGG - chr2_2:64638112-64638131 Msa0264690:CDS 50.0%
!! TAGGGGAACTTGTTGTCAGG+TGG - chr2_2:64638115-64638134 Msa0264690:CDS 50.0%
! GTGATGGAGGGAGAATGGAA+GGG - chr2_2:64638417-64638436 Msa0264690:intron 50.0%
! ACTTTTGGCCGCAGTCTAGT+GGG - chr2_2:64638477-64638496 Msa0264690:intron 50.0%
GAAGTTCAAAAGCCCTGGCT+TGG + chr2_2:64638622-64638641 None:intergenic 50.0%
GATACCGCAGCAAGAAGGAT+AGG - chr2_2:64638666-64638685 Msa0264690:intron 50.0%
AAAGCTGAAGCAGAGAGAGC+AGG - chr2_2:64638751-64638770 Msa0264690:CDS 50.0%
TCCTTAGACCCTACCTCCAT+TGG - chr2_2:64638800-64638819 Msa0264690:five_prime_UTR 50.0%
ACCAATGGAGGTAGGGTCTA+AGG + chr2_2:64638804-64638823 None:intergenic 50.0%
TGGCCTCTTGATACCAATGG+AGG + chr2_2:64638816-64638835 None:intergenic 50.0%
TATCAAGAGGCCACAAGGGA+GGG - chr2_2:64638823-64638842 Msa0264690:five_prime_UTR 50.0%
!! GTTCTTCTGGTTTGGGTGGT+GGG - chr2_2:64637535-64637554 Msa0264690:CDS 50.0%
!!! TTGGGTGGTGGGTTTTTGAG+TGG - chr2_2:64637546-64637565 Msa0264690:CDS 50.0%
ATGAGCGAAGACGATGAGCA+TGG - chr2_2:64637777-64637796 Msa0264690:CDS 50.0%
GAGCATGGTTACGGAGAAGA+TGG - chr2_2:64637792-64637811 Msa0264690:CDS 50.0%
!! GATGGTGGGAAGGGGAAAAA+AGG - chr2_2:64637834-64637853 Msa0264690:CDS 50.0%
AGGGGAAAAAAGGGTCTCCT+TGG - chr2_2:64637844-64637863 Msa0264690:CDS 50.0%
CTCCTTGGCAGAGAATGAAG+TGG - chr2_2:64637859-64637878 Msa0264690:CDS 50.0%
GTCCACTTCATTCTCTGCCA+AGG + chr2_2:64637864-64637883 None:intergenic 50.0%
GGTTGGGCTTCTTATAGCAG+TGG - chr2_2:64637893-64637912 Msa0264690:CDS 50.0%
!! TGGTAGGGGAACTTGTTGTC+AGG - chr2_2:64638112-64638131 Msa0264690:CDS 50.0%
!! TAGGGGAACTTGTTGTCAGG+TGG - chr2_2:64638115-64638134 Msa0264690:CDS 50.0%
! GTGATGGAGGGAGAATGGAA+GGG - chr2_2:64638417-64638436 Msa0264690:intron 50.0%
! ACTTTTGGCCGCAGTCTAGT+GGG - chr2_2:64638477-64638496 Msa0264690:intron 50.0%
GAAGTTCAAAAGCCCTGGCT+TGG + chr2_2:64638622-64638641 None:intergenic 50.0%
GATACCGCAGCAAGAAGGAT+AGG - chr2_2:64638666-64638685 Msa0264690:intron 50.0%
AAAGCTGAAGCAGAGAGAGC+AGG - chr2_2:64638751-64638770 Msa0264690:CDS 50.0%
TCCTTAGACCCTACCTCCAT+TGG - chr2_2:64638800-64638819 Msa0264690:five_prime_UTR 50.0%
ACCAATGGAGGTAGGGTCTA+AGG + chr2_2:64638804-64638823 None:intergenic 50.0%
TGGCCTCTTGATACCAATGG+AGG + chr2_2:64638816-64638835 None:intergenic 50.0%
TATCAAGAGGCCACAAGGGA+GGG - chr2_2:64638823-64638842 Msa0264690:five_prime_UTR 50.0%
!! GGTTCTTCTGGTTTGGGTGG+TGG - chr2_2:64637534-64637553 Msa0264690:CDS 55.0%
!!! GGTTTTTGAGTGGTCCCGCT+GGG - chr2_2:64637556-64637575 Msa0264690:CDS 55.0%
!!! GTTTTTGAGTGGTCCCGCTG+GGG - chr2_2:64637557-64637576 Msa0264690:CDS 55.0%
!!! TTTTTGAGTGGTCCCGCTGG+GGG - chr2_2:64637558-64637577 Msa0264690:CDS 55.0%
AGGGTCCAAAATACCCCCAG+CGG + chr2_2:64637574-64637593 None:intergenic 55.0%
! ATCCGGGGTGTCACAGAAGA+AGG - chr2_2:64637971-64637990 Msa0264690:CDS 55.0%
! TCCGGGGTGTCACAGAAGAA+GGG - chr2_2:64637972-64637991 Msa0264690:CDS 55.0%
ACCCTTCTTCTGTGACACCC+CGG + chr2_2:64637976-64637995 None:intergenic 55.0%
!! ACGTGGTGATGGAGGGAGAA+TGG - chr2_2:64638412-64638431 Msa0264690:intron 55.0%
!! GGTGATGGAGGGAGAATGGA+AGG - chr2_2:64638416-64638435 Msa0264690:intron 55.0%
!! GTGAGGAGGATGGCCACTTT+TGG - chr2_2:64638462-64638481 Msa0264690:intron 55.0%
CACTAGACTGCGGCCAAAAG+TGG + chr2_2:64638478-64638497 None:intergenic 55.0%
! CACTTTTGGCCGCAGTCTAG+TGG - chr2_2:64638476-64638495 Msa0264690:intron 55.0%
AAGACCCTGCAAAGTCTCCG+TGG - chr2_2:64638537-64638556 Msa0264690:intron 55.0%
AGACCCTGCAAAGTCTCCGT+GGG - chr2_2:64638538-64638557 Msa0264690:intron 55.0%
TCTCCCACGGAGACTTTGCA+GGG + chr2_2:64638544-64638563 None:intergenic 55.0%
TTCTCCCACGGAGACTTTGC+AGG + chr2_2:64638545-64638564 None:intergenic 55.0%
CTCCGTGGGAGAAAAGAGAG+TGG - chr2_2:64638552-64638571 Msa0264690:intron 55.0%
GCTCCCTATCCTTCTTGCTG+CGG + chr2_2:64638673-64638692 None:intergenic 55.0%
CAGCAAGAAGGATAGGGAGC+TGG - chr2_2:64638673-64638692 Msa0264690:intron 55.0%
AGCAGGAGGCAGAGTTCAGT+AGG - chr2_2:64638768-64638787 Msa0264690:CDS 55.0%
GTATCAAGAGGCCACAAGGG+AGG - chr2_2:64638822-64638841 Msa0264690:five_prime_UTR 55.0%
!! GGTTCTTCTGGTTTGGGTGG+TGG - chr2_2:64637534-64637553 Msa0264690:CDS 55.0%
!!! GGTTTTTGAGTGGTCCCGCT+GGG - chr2_2:64637556-64637575 Msa0264690:CDS 55.0%
!!! GTTTTTGAGTGGTCCCGCTG+GGG - chr2_2:64637557-64637576 Msa0264690:CDS 55.0%
!!! TTTTTGAGTGGTCCCGCTGG+GGG - chr2_2:64637558-64637577 Msa0264690:CDS 55.0%
AGGGTCCAAAATACCCCCAG+CGG + chr2_2:64637574-64637593 None:intergenic 55.0%
! ATCCGGGGTGTCACAGAAGA+AGG - chr2_2:64637971-64637990 Msa0264690:CDS 55.0%
! TCCGGGGTGTCACAGAAGAA+GGG - chr2_2:64637972-64637991 Msa0264690:CDS 55.0%
ACCCTTCTTCTGTGACACCC+CGG + chr2_2:64637976-64637995 None:intergenic 55.0%
!! ACGTGGTGATGGAGGGAGAA+TGG - chr2_2:64638412-64638431 Msa0264690:intron 55.0%
!! GGTGATGGAGGGAGAATGGA+AGG - chr2_2:64638416-64638435 Msa0264690:intron 55.0%
!! GTGAGGAGGATGGCCACTTT+TGG - chr2_2:64638462-64638481 Msa0264690:intron 55.0%
CACTAGACTGCGGCCAAAAG+TGG + chr2_2:64638478-64638497 None:intergenic 55.0%
! CACTTTTGGCCGCAGTCTAG+TGG - chr2_2:64638476-64638495 Msa0264690:intron 55.0%
AAGACCCTGCAAAGTCTCCG+TGG - chr2_2:64638537-64638556 Msa0264690:intron 55.0%
AGACCCTGCAAAGTCTCCGT+GGG - chr2_2:64638538-64638557 Msa0264690:intron 55.0%
TCTCCCACGGAGACTTTGCA+GGG + chr2_2:64638544-64638563 None:intergenic 55.0%
TTCTCCCACGGAGACTTTGC+AGG + chr2_2:64638545-64638564 None:intergenic 55.0%
CTCCGTGGGAGAAAAGAGAG+TGG - chr2_2:64638552-64638571 Msa0264690:intron 55.0%
GCTCCCTATCCTTCTTGCTG+CGG + chr2_2:64638673-64638692 None:intergenic 55.0%
CAGCAAGAAGGATAGGGAGC+TGG - chr2_2:64638673-64638692 Msa0264690:intron 55.0%
AGCAGGAGGCAGAGTTCAGT+AGG - chr2_2:64638768-64638787 Msa0264690:CDS 55.0%
GTATCAAGAGGCCACAAGGG+AGG - chr2_2:64638822-64638841 Msa0264690:five_prime_UTR 55.0%
!!! GGGTTTTTGAGTGGTCCCGC+TGG - chr2_2:64637555-64637574 Msa0264690:CDS 60.0%
!!! TGGTCCCGCTGGGGGTATTT+TGG - chr2_2:64637566-64637585 Msa0264690:CDS 60.0%
GGGTCCAAAATACCCCCAGC+GGG + chr2_2:64637573-64637592 None:intergenic 60.0%
GGATAGGGAGCTGGAGAAGC+TGG - chr2_2:64638682-64638701 Msa0264690:intron 60.0%
GCTGAAGCAGAGAGAGCAGG+AGG - chr2_2:64638754-64638773 Msa0264690:CDS 60.0%
!!! GGGTTTTTGAGTGGTCCCGC+TGG - chr2_2:64637555-64637574 Msa0264690:CDS 60.0%
!!! TGGTCCCGCTGGGGGTATTT+TGG - chr2_2:64637566-64637585 Msa0264690:CDS 60.0%
GGGTCCAAAATACCCCCAGC+GGG + chr2_2:64637573-64637592 None:intergenic 60.0%
GGATAGGGAGCTGGAGAAGC+TGG - chr2_2:64638682-64638701 Msa0264690:intron 60.0%
GCTGAAGCAGAGAGAGCAGG+AGG - chr2_2:64638754-64638773 Msa0264690:CDS 60.0%
TGTGTCGCCGCAGCAGTGTG+AGG - chr2_2:64638040-64638059 Msa0264690:CDS 65.0%
GGAGCTGGAGAAGCTGGCGA+TGG - chr2_2:64638688-64638707 Msa0264690:intron 65.0%
TGTGTCGCCGCAGCAGTGTG+AGG - chr2_2:64638040-64638059 Msa0264690:CDS 65.0%
GGAGCTGGAGAAGCTGGCGA+TGG - chr2_2:64638688-64638707 Msa0264690:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 64637126 64638874 64637126 ID=Msa0264690;Name=Msa0264690
chr2_2 mRNA 64637126 64638874 64637126 ID=Msa0264690-mRNA-1;Parent=Msa0264690;Name=Msa0264690-mRNA-1;_AED=0.12;_eAED=0.12;_QI=78|0.5|0.33|1|1|1|3|0|412
chr2_2 exon 64637126 64638259 64637126 ID=Msa0264690-mRNA-1:exon:20269;Parent=Msa0264690-mRNA-1
chr2_2 exon 64638547 64638554 64638547 ID=Msa0264690-mRNA-1:exon:20268;Parent=Msa0264690-mRNA-1
chr2_2 exon 64638700 64638874 64638700 ID=Msa0264690-mRNA-1:exon:20267;Parent=Msa0264690-mRNA-1
chr2_2 five_prime_UTR 64638797 64638874 64638797 ID=Msa0264690-mRNA-1:five_prime_utr;Parent=Msa0264690-mRNA-1
chr2_2 CDS 64638700 64638796 64638700 ID=Msa0264690-mRNA-1:cds;Parent=Msa0264690-mRNA-1
chr2_2 CDS 64638547 64638554 64638547 ID=Msa0264690-mRNA-1:cds;Parent=Msa0264690-mRNA-1
chr2_2 CDS 64637126 64638259 64637126 ID=Msa0264690-mRNA-1:cds;Parent=Msa0264690-mRNA-1
Gene Sequence

>Msa0264690

ATGCCATATTCCGAAGCCAAAGATCAAGACAAAGAAACTGACAAGTACGAAGAAACTCCAACTCTTCCATTGATCTCTCCTTGGTACTCATCAACAGTTTTCCCAGGAGTTGCTAGTTCTAATCATGATAATAGTAATGATATGAGCGAAGACGATGAGCATGGTTACGGAGAAGATGGGAATTGCGAGAATTTTTTCGATGGTGGGAAGGGGAAAAAAGGGTCTCCTTGGCAGAGAATGAAGTGGACGGATAATGTGGTTGGGCTTCTTATAGCAGTGGTGAGTTGTGTTGGTGATGATGGAACAATTAGTGGTGTGGATGGTGTTAAGAAGAAATCCGGGGTGTCACAGAAGAAGGGTAAGTGGAAAACTGTTTCTAAGATAATGATAAGTAAAGGTTGTCATGTGTCGCCGCAGCAGTGTGAGGATAAGTTCAATGACTTGAATAAGAGATATAAGAGGTTGAATGAGATGCTTGGTAGGGGAACTTGTTGTCAGGTGGTTGAGAATCCTGCATTGATGGATTCAATGGTTAACTTGTCTGCTAAGGCTAAGGATGATGTTAGAAAGATATTGAGCTCAAAACATTTGTTTTATAAAGAAATGTGTGCATACCACAATGGTCAAAGGATACCCAATAGTCATGATCTTGACTTGCATAGTTATTCGTTGGAACACGGGAAGGACTCAAGAGATCACGATGGCTCTGATGATGAAGATGAAGATAACAATGAAAGTGAGGATGATGAGTTGGATAATGGAATTAATATTAATGCACGTGGTGATGGAGGGAGAATGGAAGGGTTTTGTGATAGAAATAAATTAAGTGAGGAGGATGGCCACTTTTGGCCGCAGTCTAGTGGGATGAAGAAACTTGAGAGTGAAATGGCAAGGGTTTTTCAAGACCCTGCAAAGTCTCCGTGGGAGAAAAGAGAGTGGATTAAGGAACAGTTGTTGCAGCTCCAAGAGCAAAATGTTGACTTCCAAGCCAGGGCTTTTGAACTTCAGAAACAGCGGTTTAAGTGGTTAAGATACCGCAGCAAGAAGGATAGGGAGCTGGAGAAGCTGGCGATGGAGAACAAGAGAATGCAATTTGAAAATGAGCACAGGATCTTAAAGCTGAAGCAGAGAGAGCAGGAGGCAGAGTTCAGTAGGTCTGAGATGTCCTTAGACCCTACCTCCATTGGTATCAAGAGGCCACAAGGGAGGGAACATATCAACTTGGCTAGACAGCACTAG

Protein sequence

>Msa0264690

MPYSEAKDQDKETDKYEETPTLPLISPWYSSTVFPGVASSNHDNSNDMSEDDEHGYGEDGNCENFFDGGKGKKGSPWQRMKWTDNVVGLLIAVVSCVGDDGTISGVDGVKKKSGVSQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEMLGRGTCCQVVENPALMDSMVNLSAKAKDDVRKILSSKHLFYKEMCAYHNGQRIPNSHDLDLHSYSLEHGKDSRDHDGSDDEDEDNNESEDDELDNGININARGDGGRMEGFCDRNKLSEEDGHFWPQSSGMKKLESEMARVFQDPAKSPWEKREWIKEQLLQLQEQNVDFQARAFELQKQRFKWLRYRSKKDRELEKLAMENKRMQFENEHRILKLKQREQEAEFSRSEMSLDPTSIGIKRPQGREHINLARQH*