AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1382710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382710 MtrunA17_Chr3g0130631 89.960 747 47 3 1 742 1 724 0.0 1069
Msa1382710 MtrunA17_Chr8g0384651 75.260 384 78 4 366 743 531 903 1.05e-108 352
Msa1382710 MtrunA17_Chr8g0384651 54.673 428 128 14 1 367 1 423 8.31e-93 309
Msa1382710 MtrunA17_Chr8g0372931 48.184 413 145 12 362 742 1054 1429 2.66e-78 275
Msa1382710 MtrunA17_Chr3g0125121 59.494 237 88 4 511 742 277 510 6.81e-74 249
Msa1382710 MtrunA17_Chr1g0155381 43.213 361 136 6 388 742 1061 1358 5.61e-65 235
Msa1382710 MtrunA17_Chr3g0141421 55.789 95 42 0 648 742 588 682 7.91e-32 132
Msa1382710 MtrunA17_Chr2g0304091 56.818 88 38 0 655 742 356 443 4.12e-28 118
Msa1382710 MtrunA17_Chr8g0376701 52.273 88 42 0 655 742 363 450 6.59e-28 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1382710 AT4G12770.2 54.491 334 106 7 452 742 548 878 8.99e-83 282
Msa1382710 AT4G12770.2 32.168 429 164 13 1 356 1 375 2.08e-34 141
Msa1382710 AT4G12780.3 56.522 345 135 6 412 742 523 866 1.02e-82 281
Msa1382710 AT4G12780.3 28.637 433 149 17 1 356 1 350 1.91e-17 87.4
Msa1382710 AT4G12780.1 56.522 345 135 6 412 742 550 893 1.15e-82 282
Msa1382710 AT4G12780.1 30.679 427 163 18 1 350 1 371 6.81e-28 120
Msa1382710 AT4G12770.1 54.030 335 108 7 452 742 548 880 9.63e-82 279
Msa1382710 AT4G12770.1 32.168 429 164 13 1 356 1 375 1.93e-34 141
Msa1382710 AT4G12780.2 54.420 362 133 8 412 742 523 883 7.87e-79 271
Msa1382710 AT4G12780.2 28.637 433 149 17 1 356 1 350 3.19e-17 87.0
Msa1382710 AT1G21660.1 52.743 237 105 3 506 742 283 512 5.19e-71 241
Msa1382710 AT4G36520.1 49.329 298 84 7 456 742 1171 1412 1.26e-64 234
Msa1382710 AT1G75310.2 40.849 377 162 8 368 742 1124 1441 2.32e-56 209
Msa1382710 AT1G75310.1 44.966 298 134 6 449 742 1167 1438 1.26e-52 198
Msa1382710 AT4G12780.5 56.863 255 93 7 412 651 550 802 1.85e-28 122
Msa1382710 AT4G12780.5 30.679 427 163 18 1 350 1 371 1.78e-27 119
Msa1382710 AT4G12780.6 56.863 255 93 7 412 651 523 775 2.46e-28 122
Msa1382710 AT4G12780.6 28.637 433 149 17 1 356 1 350 5.95e-17 85.9
Msa1382710 AT4G12780.4 56.863 255 93 7 412 651 523 775 2.46e-28 122
Msa1382710 AT4G12780.4 28.637 433 149 17 1 356 1 350 5.95e-17 85.9
Msa1382710 AT1G75100.1 46.296 108 58 0 635 742 533 640 1.09e-27 119
Msa1382710 AT1G30280.1 44.318 88 48 1 662 748 361 448 8.78e-20 93.6
Msa1382710 AT1G30280.2 48.148 81 41 1 662 741 361 441 2.08e-19 92.4

Find 205 sgRNAs with CRISPR-Local

Find 451 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACACAGTTGTAGGTTTC+TGG 0.157218 tig0020524:+9171 None:intergenic
TCCCTCAGCTGGAGAATTTC+AGG 0.198356 tig0020524:-8973 Msa1382710:CDS
CCCTTCTGCTGCACTTTATC+AGG 0.215143 tig0020524:+7354 None:intergenic
TACAGCCGCTACTGTTAAAA+AGG 0.236113 tig0020524:-7406 Msa1382710:CDS
CAGCAGCTGCAGCTCTTTCT+CGG 0.239034 tig0020524:+9909 None:intergenic
TTGTTATGTGTTCGTCTATC+AGG 0.263486 tig0020524:+10673 None:intergenic
GAAAGATCATCAACAATATT+AGG 0.291136 tig0020524:+9122 None:intergenic
AATTTACTAATCTCTTCTAA+TGG 0.298569 tig0020524:+10913 None:intergenic
CAGCAGCCTTCTCAGCTCTT+TGG 0.302766 tig0020524:+10161 None:intergenic
GATGATTTGATCAATGGATT+TGG 0.304715 tig0020524:-12753 Msa1382710:CDS
TGAATGATGATCAGGTATTA+TGG 0.312370 tig0020524:-7470 Msa1382710:intron
CCTCAGATCATGACGATATA+TGG 0.313995 tig0020524:-10471 Msa1382710:CDS
CCTCAGCAGCAGCCCTTTCA+CGG 0.316110 tig0020524:+10068 None:intergenic
AGCAGCTGCAGCTCTTTCTC+GGG 0.328646 tig0020524:+9910 None:intergenic
TTAGAATCAGATGAATATTT+AGG 0.329043 tig0020524:+10601 None:intergenic
TTCAATTGATTCTTTATCTC+TGG 0.335760 tig0020524:+10714 None:intergenic
CACAGGCCCACTCCTGATAT+TGG 0.347676 tig0020524:-11057 Msa1382710:intron
CGTTTATTAGCTACTGAATT+CGG 0.366518 tig0020524:-13095 Msa1382710:CDS
ATTTACTAATCTCTTCTAAT+GGG 0.371043 tig0020524:+10914 None:intergenic
TTGTGTTTGACCACGGTGTT+GGG 0.371244 tig0020524:+10749 None:intergenic
ATGATTTGATCAATGGATTT+GGG 0.374205 tig0020524:-12752 Msa1382710:CDS
GCAGAAATATATTGCAGAAA+AGG 0.382951 tig0020524:-7319 Msa1382710:CDS
GGTGAAATTGGAAGATCCTT+TGG 0.383015 tig0020524:+13028 None:intergenic
AGGAGGCCTTGGAGCGCTAT+TGG 0.387575 tig0020524:+9823 None:intergenic
ATGTTTGAAGACACAGTTGT+AGG 0.389263 tig0020524:+9164 None:intergenic
GATGATCTTCTCGGCGGATT+CGG 0.391097 tig0020524:-12822 Msa1382710:CDS
TAAAGAGGTTTATCATAAAC+AGG 0.396140 tig0020524:+12876 None:intergenic
TCTGATGATGAACCAATATC+AGG 0.396642 tig0020524:+11045 None:intergenic
CTCAGCAGCAGCCCTTTCAC+GGG 0.403036 tig0020524:+10069 None:intergenic
AACTCCTGATCATGTTCAAC+AGG 0.404831 tig0020524:+10646 None:intergenic
GAAGTTAAGCGCTGGGCTGC+AGG 0.405772 tig0020524:-8074 Msa1382710:CDS
GAGTTAGACCTAGGAGGCCT+TGG 0.407343 tig0020524:+9812 None:intergenic
GAAGTTGAGAGAGGAAGTTT+TGG 0.413068 tig0020524:+13007 None:intergenic
CGCTGGGCTGCAGGGAAAGA+GGG 0.414763 tig0020524:-8065 Msa1382710:CDS
GTAGGTTTCTGGTTTACCTC+TGG 0.416290 tig0020524:+9182 None:intergenic
CCTCTGAAGGCGTTCCAATC+TGG 0.418587 tig0020524:+8917 None:intergenic
CTGCTTCTCTCCTCTGACTT+GGG 0.419390 tig0020524:+10361 None:intergenic
AGGGTCTTCTGTTGCATTGG+AGG 0.419847 tig0020524:+10996 None:intergenic
CGAGGAGGAGGTGGTCTTGA+AGG 0.420028 tig0020524:+10397 None:intergenic
GAAAATAAATAAACAAGAAA+AGG 0.420079 tig0020524:-13271 Msa1382710:five_prime_UTR
ACTGCCTGCCAACCACATTC+AGG 0.420484 tig0020524:+7447 None:intergenic
AGCTAGAGTGCGTGCTGAAA+GGG 0.423395 tig0020524:-10119 Msa1382710:CDS
GTTGCGTTTGATGATCTTCT+CGG 0.423406 tig0020524:-12831 Msa1382710:CDS
AAATCGTTCATCGTGAGATC+TGG 0.427946 tig0020524:+13122 None:intergenic
GCGCTGGGCTGCAGGGAAAG+AGG 0.430219 tig0020524:-8066 Msa1382710:CDS
CTCAGTAACCACACCTTTGA+CGG 0.433699 tig0020524:+12718 None:intergenic
GATAGTTCATCAAATTCTAA+TGG 0.437018 tig0020524:-10865 Msa1382710:CDS
ACTGCTTCTCTCCTCTGACT+TGG 0.437860 tig0020524:+10360 None:intergenic
CCGTCATCGTCGTCGTAAAG+AGG 0.439814 tig0020524:+12861 None:intergenic
TGACCACGGTGTTGGGGAAT+CGG 0.440553 tig0020524:+10756 None:intergenic
CTGAAAGGGCCGCTGTTCAG+AGG 0.442095 tig0020524:-10105 Msa1382710:CDS
CTGCTGCTGAGGCAAAGAAA+AGG 0.445504 tig0020524:-10057 Msa1382710:CDS
AAGAAGGGGAAGTAGGCATT+TGG 0.450918 tig0020524:+10563 None:intergenic
AGGGCTGAAAAGGCTGCTGC+AGG 0.454335 tig0020524:-10037 Msa1382710:CDS
AAACCATCATTAAAATAAGA+AGG 0.455056 tig0020524:+10547 None:intergenic
AAGAATTGAAAGGGAAAGGA+AGG 0.455730 tig0020524:-10290 Msa1382710:CDS
GATTCCTGTTGAACATGATC+AGG 0.457157 tig0020524:-10650 Msa1382710:CDS
TGTGGAAAGGGCTGCTGCAG+AGG 0.458750 tig0020524:-9933 Msa1382710:CDS
CGTTCTTCAGCGTGAGGGGA+CGG 0.458812 tig0020524:-9847 Msa1382710:CDS
GTAGGCATTTGGCCAGCTAC+TGG 0.464119 tig0020524:+10574 None:intergenic
TCAGAGAGGACTAGCAGATA+TGG 0.464943 tig0020524:-10781 Msa1382710:CDS
AAAAGGGTCTTCTGTTGCAT+TGG 0.465313 tig0020524:+10993 None:intergenic
GAAGAGATCGGAATCATGAT+TGG 0.465418 tig0020524:+12956 None:intergenic
AAAGGCTGCTGCAGGGGAAA+AGG 0.465673 tig0020524:-10029 Msa1382710:CDS
ACCGGAGGTGCTACGAGAGA+TGG 0.465933 tig0020524:+12923 None:intergenic
GAGAGCAAAGAAGAATTGAA+AGG 0.467658 tig0020524:-10300 Msa1382710:CDS
ATAGCGCTCCAAGGCCTCCT+AGG 0.469434 tig0020524:-9820 Msa1382710:CDS
CACAAGCTGAAGCCCGTGAA+AGG 0.469852 tig0020524:-10081 Msa1382710:CDS
GGCAAAGAAAAGGGCTGAAA+AGG 0.470382 tig0020524:-10047 Msa1382710:CDS
CCGTGAAAGGGCTGCTGCTG+AGG 0.470897 tig0020524:-10068 Msa1382710:CDS
ATCATAAACAGGCGAGTTGA+CGG 0.471295 tig0020524:+12887 None:intergenic
CCGTGGTCAAACACAAGTTC+AGG 0.471860 tig0020524:-10742 Msa1382710:CDS
CGAATTCAGTAGCTAATAAA+CGG 0.475132 tig0020524:+13096 None:intergenic
TCCAAAATATGAAGAAAAGT+TGG 0.477629 tig0020524:-10494 Msa1382710:CDS
GCTCCAACTGATTCATCCTC+AGG 0.479394 tig0020524:-10949 Msa1382710:CDS
GGAGAATTTCAGGAAGTTGA+AGG 0.481680 tig0020524:-8963 Msa1382710:CDS
ATATGTACTGGTCGAGGAGG+AGG 0.482183 tig0020524:+10385 None:intergenic
GGAAAGAGAAAATGAAAGAC+AGG 0.482527 tig0020524:-10236 Msa1382710:CDS
TTAAAATAAGAAGGGGAAGT+AGG 0.484614 tig0020524:+10556 None:intergenic
AAGCTAGAGTGCGTGCTGAA+AGG 0.485213 tig0020524:-10120 Msa1382710:CDS
AGAGCAAAGAAGAATTGAAA+GGG 0.486134 tig0020524:-10299 Msa1382710:CDS
CCCATCTCTCGTAGCACCTC+CGG 0.486573 tig0020524:-12924 Msa1382710:CDS
AGAAAGGCGAAAAGCCAGAT+TGG 0.487061 tig0020524:-8931 Msa1382710:CDS
CTTGTGTTTGACCACGGTGT+TGG 0.489404 tig0020524:+10748 None:intergenic
ACGGTGGTTTCTTCCGTCTA+CGG 0.494243 tig0020524:+13148 None:intergenic
AAAGAAGAATTGAAAGGGAA+AGG 0.494666 tig0020524:-10294 Msa1382710:CDS
GTTCTTCAGCGTGAGGGGAC+GGG 0.495306 tig0020524:-9846 Msa1382710:CDS
GAGAACAACAGAGACTTGAG+AGG 0.495826 tig0020524:-10258 Msa1382710:CDS
CTTAGTACATACATATTGTA+AGG 0.496733 tig0020524:+8019 None:intergenic
GACGGACATGGAATCGAAAC+CGG 0.497502 tig0020524:+12905 None:intergenic
CGCGCTCCTGAGCCCTCTGA+AGG 0.498449 tig0020524:+8904 None:intergenic
GTCGGTGGATCAGCAGTTAG+AGG 0.500658 tig0020524:+13173 None:intergenic
AGAAAATGAAAGACAGGCTG+TGG 0.501628 tig0020524:-10230 Msa1382710:CDS
ATTGGAAGAGTGAAAGGATC+GGG 0.502219 tig0020524:+12974 None:intergenic
GGGATTAGAATTGAAGAGAT+CGG 0.502447 tig0020524:+12944 None:intergenic
CATATCTGCCCGAGAATTGA+CGG 0.506680 tig0020524:+10519 None:intergenic
AAACCATGAGCAGCAGCAAA+AGG 0.509397 tig0020524:-10335 Msa1382710:CDS
GAGTTTCATCAAGCGCCATA+TGG 0.510705 tig0020524:-10628 Msa1382710:CDS
AACCATCATTAAAATAAGAA+GGG 0.510911 tig0020524:+10548 None:intergenic
CTGTGTCTTCAAACATAAAG+AGG 0.511873 tig0020524:-9157 Msa1382710:CDS
TTTGAAGCATCTCCCTCAGC+TGG 0.511972 tig0020524:-8984 Msa1382710:intron
TGCTGCTGAGGCAAAGAAAA+GGG 0.513805 tig0020524:-10056 Msa1382710:CDS
TCAACAATATTAGGTGATGA+TGG 0.515248 tig0020524:+9131 None:intergenic
CCGGAGGTGCTACGAGAGAT+GGG 0.515653 tig0020524:+12924 None:intergenic
ACAAGCTGAAGCCCGTGAAA+GGG 0.521348 tig0020524:-10080 Msa1382710:CDS
TGGACTTTGAAGTTAAGCGC+TGG 0.522927 tig0020524:-8082 Msa1382710:CDS
CTTCCGTCTACGGTGGTCGG+TGG 0.522990 tig0020524:+13158 None:intergenic
GAATATTTAGGCATGCCATA+TGG 0.526400 tig0020524:+10613 None:intergenic
TCTGCTCTCTTTGAGTCTGT+AGG 0.527874 tig0020524:+8437 None:intergenic
TCTGACTTGGGAATATGTAC+TGG 0.528885 tig0020524:+10373 None:intergenic
GGACTTTGAAGTTAAGCGCT+GGG 0.530794 tig0020524:-8081 Msa1382710:CDS
CTTCTAATGGGTCTGAAAAG+TGG 0.534760 tig0020524:+10926 None:intergenic
TTTATACTAGGCAAAGGCAT+TGG 0.535677 tig0020524:-8479 Msa1382710:intron
TCAGAGGCTTGCGGAAACAC+TGG 0.536353 tig0020524:-8102 Msa1382710:intron
CAGAACGTGCTGCTGTGGAA+AGG 0.537152 tig0020524:-9946 Msa1382710:CDS
GAATCGTTCTTCAGCGTGAG+GGG 0.539328 tig0020524:-9851 Msa1382710:CDS
GAATTTCCAAGTCCATCAAA+AGG 0.540071 tig0020524:+10820 None:intergenic
GGCTGAAAAGGCTGCTGCAG+GGG 0.540322 tig0020524:-10035 Msa1382710:CDS
ATCATGATTGGAAGAGTGAA+AGG 0.543443 tig0020524:+12968 None:intergenic
ATGGCCTGAATGTGGTTGGC+AGG 0.545019 tig0020524:-7451 Msa1382710:CDS
TTGAAGGGGAAAGTGAAGAA+AGG 0.545134 tig0020524:-8947 Msa1382710:CDS
TCAGCAGTTAGAGGAAGAGA+AGG 0.545352 tig0020524:+13182 None:intergenic
AGAACGTGCTGCTGTGGAAA+GGG 0.545428 tig0020524:-9945 Msa1382710:CDS
ATTGGCTGAGAAGAATCAAC+GGG 0.546286 tig0020524:-8461 Msa1382710:CDS
GGAACGCCTTCAGAGGGCTC+AGG 0.554110 tig0020524:-8910 Msa1382710:CDS
GCAGTTAGAGGAAGAGAAGG+AGG 0.556656 tig0020524:+13185 None:intergenic
GAGAATTTCAGGAAGTTGAA+GGG 0.556708 tig0020524:-8962 Msa1382710:CDS
GATTCTAATAAACCAGTAGC+TGG 0.557003 tig0020524:-10586 Msa1382710:CDS
AGCTCGCCAAAGAGCTGAGA+AGG 0.557004 tig0020524:-10167 Msa1382710:CDS
GAAGGTGGTGGAGCAGAAGT+TGG 0.558690 tig0020524:+10415 None:intergenic
AAGTTAAGCGCTGGGCTGCA+GGG 0.559252 tig0020524:-8073 Msa1382710:CDS
GGGCTGAAAAGGCTGCTGCA+GGG 0.559351 tig0020524:-10036 Msa1382710:CDS
TCCTGATAAAGTGCAGCAGA+AGG 0.559973 tig0020524:-7355 Msa1382710:CDS
GGAACAAGTCCTCCCGTCAA+AGG 0.560199 tig0020524:-12731 Msa1382710:intron
TTTCTTCCGTCTACGGTGGT+CGG 0.560986 tig0020524:+13155 None:intergenic
ATTCGGTCATTCGAAGAAAA+CGG 0.561173 tig0020524:-12805 Msa1382710:CDS
TGTACTGGTCGAGGAGGAGG+TGG 0.561547 tig0020524:+10388 None:intergenic
TCAGTAACCACACCTTTGAC+GGG 0.564015 tig0020524:+12719 None:intergenic
TCCTGAAATTCTCCAGCTGA+GGG 0.565222 tig0020524:+8972 None:intergenic
CCTCTTTACGACGACGATGA+CGG 0.565572 tig0020524:-12861 Msa1382710:CDS
TAAAGCAGAACGTGCTGCTG+TGG 0.566166 tig0020524:-9951 Msa1382710:CDS
TGGCCTGAGGATGAATCAGT+TGG 0.568887 tig0020524:+10946 None:intergenic
TGAGCAGCAGCAAAAGGAGA+TGG 0.568955 tig0020524:-10329 Msa1382710:CDS
TGAAAGGGCCGCTGTTCAGA+GGG 0.569740 tig0020524:-10104 Msa1382710:CDS
ATGTGAATCGAAGTTGAGAG+AGG 0.572513 tig0020524:+12998 None:intergenic
AACAGGCGAGTTGACGGACA+TGG 0.572944 tig0020524:+12893 None:intergenic
TGAATCGTTCTTCAGCGTGA+GGG 0.573586 tig0020524:-9852 Msa1382710:CDS
GCTGGGCTGCAGGGAAAGAG+GGG 0.574702 tig0020524:-8064 Msa1382710:CDS
CCAGATTGGAACGCCTTCAG+AGG 0.574933 tig0020524:-8917 Msa1382710:CDS
ATATCTGCCCGAGAATTGAC+GGG 0.576043 tig0020524:+10520 None:intergenic
GTCCTCTCTGATGAAAATGC+TGG 0.577003 tig0020524:+10793 None:intergenic
GATTGGAAGAGTGAAAGGAT+CGG 0.577344 tig0020524:+12973 None:intergenic
GAGAAAGAGCTGCAGCTGCA+AGG 0.578548 tig0020524:-9994 Msa1382710:CDS
GGAGGTGGTCTTGAAGGTGG+TGG 0.579037 tig0020524:+10403 None:intergenic
TTCCTGAAATTCTCCAGCTG+AGG 0.579563 tig0020524:+8971 None:intergenic
GTGAAGAATGAGAGAGGTGT+CGG 0.580582 tig0020524:-12783 Msa1382710:CDS
GGAGGAGGTGGTCTTGAAGG+TGG 0.581949 tig0020524:+10400 None:intergenic
GATCCACCGACCACCGTAGA+CGG 0.589033 tig0020524:-13161 Msa1382710:five_prime_UTR
TGATGCACAATTTCAGCCAG+AGG 0.589144 tig0020524:-9198 Msa1382710:CDS
CCATATATCGTCATGATCTG+AGG 0.593418 tig0020524:+10471 None:intergenic
TTGAATCGTTCTTCAGCGTG+AGG 0.593892 tig0020524:-9853 Msa1382710:CDS
GACGGGCCAATAGCGCTCCA+AGG 0.596506 tig0020524:-9829 Msa1382710:CDS
ACCATCATTAAAATAAGAAG+GGG 0.596875 tig0020524:+10549 None:intergenic
TTGGGAATATGTACTGGTCG+AGG 0.596893 tig0020524:+10379 None:intergenic
AAAACGGTGAAGAATGAGAG+AGG 0.603787 tig0020524:-12789 Msa1382710:CDS
CAGATTGGAACGCCTTCAGA+GGG 0.608050 tig0020524:-8916 Msa1382710:CDS
ATTGGTGCAGATTTGCCTTG+AGG 0.610923 tig0020524:+13065 None:intergenic
AATATATTTCTGCTGAAGAG+TGG 0.620107 tig0020524:+7329 None:intergenic
CATTGGCTGAGAAGAATCAA+CGG 0.622100 tig0020524:-8462 Msa1382710:CDS
GATGAACCAATATCAGGAGT+GGG 0.623236 tig0020524:+11051 None:intergenic
TTGGATGATGATGATGACAT+TGG 0.623868 tig0020524:+13047 None:intergenic
TCATGACGATATATGGCTAA+CGG 0.623870 tig0020524:-10464 Msa1382710:CDS
CCTGATAAAGTGCAGCAGAA+GGG 0.624350 tig0020524:-7354 Msa1382710:CDS
GAATTCGGTTTGAAACCTCA+AGG 0.625188 tig0020524:-13080 Msa1382710:CDS
TCAGAGGGCTCAGGAGCGCG+CGG 0.626791 tig0020524:-8901 Msa1382710:intron
AGAATTTCAGGAAGTTGAAG+GGG 0.630146 tig0020524:-8961 Msa1382710:CDS
TGATGAACCAATATCAGGAG+TGG 0.633810 tig0020524:+11050 None:intergenic
ATAAGATACTAAATCTGCAG+AGG 0.634146 tig0020524:+7067 None:intergenic
CTCACAGAAGAGTTAGACCT+AGG 0.635511 tig0020524:+9803 None:intergenic
TGAGGATGAATCAGTTGGAG+CGG 0.639821 tig0020524:+10951 None:intergenic
ATGTCATCATCATCATCCAA+AGG 0.640651 tig0020524:-13044 Msa1382710:CDS
TCGTGAGATCTGGTGAACGG+TGG 0.642494 tig0020524:+13132 None:intergenic
TCATCGTGAGATCTGGTGAA+CGG 0.643199 tig0020524:+13129 None:intergenic
GGTCAAACACAAGTTCAGGT+TGG 0.644850 tig0020524:-10738 Msa1382710:CDS
GCAGCAGCAAAAGGAGATGG+AGG 0.644915 tig0020524:-10326 Msa1382710:CDS
CAGTTAGAGGAAGAGAAGGA+GGG 0.646142 tig0020524:+13186 None:intergenic
TATTATGGCCTGAATGTGGT+TGG 0.649392 tig0020524:-7455 Msa1382710:CDS
GTGGTTTCTTCCGTCTACGG+TGG 0.651169 tig0020524:+13151 None:intergenic
AGCTTGTGCCCTCTGAACAG+CGG 0.653667 tig0020524:+10096 None:intergenic
AGAACAACAGAGACTTGAGA+GGG 0.653891 tig0020524:-10257 Msa1382710:CDS
TGTGTTTGACCACGGTGTTG+GGG 0.654993 tig0020524:+10750 None:intergenic
TGTGTCTTCAAACATAAAGA+GGG 0.655665 tig0020524:-9156 Msa1382710:CDS
GAGAAGATCATCAAACGCAA+CGG 0.656158 tig0020524:+12833 None:intergenic
ACATTGATTTCAGAGGCTTG+CGG 0.656214 tig0020524:-8111 Msa1382710:intron
AGTACATATTCCCAAGTCAG+AGG 0.661965 tig0020524:-10371 Msa1382710:CDS
ACAGAAGAGTTAGACCTAGG+AGG 0.662653 tig0020524:+9806 None:intergenic
CCTGAACTTGTGTTTGACCA+CGG 0.670451 tig0020524:+10742 None:intergenic
GGAATATGTACTGGTCGAGG+AGG 0.673478 tig0020524:+10382 None:intergenic
GTAACCACACCTTTGACGGG+AGG 0.676329 tig0020524:+12722 None:intergenic
CAGGTATTATGGCCTGAATG+TGG 0.679133 tig0020524:-7459 Msa1382710:CDS
AGTACATACATATTGTAAGG+TGG 0.690241 tig0020524:+8022 None:intergenic
TGGGTCTGAAAAGTGGCCTG+AGG 0.703931 tig0020524:+10933 None:intergenic
GCGTTTGATGATCTTCTCGG+CGG 0.720705 tig0020524:-12828 Msa1382710:CDS
GGACATGGAATCGAAACCGG+AGG 0.725329 tig0020524:+12908 None:intergenic
GCACCGATTCCCCAACACCG+TGG 0.760752 tig0020524:-10759 Msa1382710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATGTAATTAATTTTGTAT+AGG + tig0020524:10900-10919 None:intergenic 10.0%
!!! AAAAGAGTTTTAAATAAAAA+AGG - tig0020524:11004-11023 Msa1382710:CDS 10.0%
!!! AAAGAGTTTTAAATAAAAAA+GGG - tig0020524:11005-11024 Msa1382710:CDS 10.0%
!!! TATTTATTTTCTAAAGTAGT+GGG + tig0020524:7082-7101 None:intergenic 15.0%
!!! TTATTTATTTTCTAAAGTAG+TGG + tig0020524:7083-7102 None:intergenic 15.0%
!! GAAAATAAATAAACAAGAAA+AGG - tig0020524:7091-7110 Msa1382710:intron 15.0%
!! TTAAGTTTAAACACAATTAT+CGG + tig0020524:8109-8128 None:intergenic 15.0%
!!! AAATGACAATTTAAAATTTG+AGG + tig0020524:8163-8182 None:intergenic 15.0%
!!! CTGATTCAAATATTTTAAAA+GGG + tig0020524:9388-9407 None:intergenic 15.0%
!! AAACATTATTTATACTAAAG+CGG - tig0020524:10596-10615 Msa1382710:CDS 15.0%
!! CATTAATAATAAAAATGATG+GGG + tig0020524:10652-10671 None:intergenic 15.0%
!! GCATTAATAATAAAAATGAT+GGG + tig0020524:10653-10672 None:intergenic 15.0%
!! TGCATTAATAATAAAAATGA+TGG + tig0020524:10654-10673 None:intergenic 15.0%
!!! ATCATTTTTATTATTAATGC+AGG - tig0020524:10653-10672 Msa1382710:CDS 15.0%
!! AAATAACATTAATGTTTCAT+TGG + tig0020524:10766-10785 None:intergenic 15.0%
!!! AAACTCTTTTAAAATAAAAG+TGG + tig0020524:10994-11013 None:intergenic 15.0%
!!! TTTAGTTCAAAATTGTAAAT+TGG + tig0020524:11572-11591 None:intergenic 15.0%
!!! TTTTTCTTTTTAACAACTAA+TGG + tig0020524:11732-11751 None:intergenic 15.0%
!! GAAAGAATATTAAAAAAATC+TGG + tig0020524:12443-12462 None:intergenic 15.0%
!! TTGAATGTAATCATATTTGT+TGG - tig0020524:7918-7937 Msa1382710:intron 20.0%
!!! AGTGCATTTTAGAATAATAA+CGG - tig0020524:8082-8101 Msa1382710:CDS 20.0%
!! TAAGTTTAAACACAATTATC+GGG + tig0020524:8108-8127 None:intergenic 20.0%
!! TAATTGTGTTTAAACTTAAG+TGG - tig0020524:8110-8129 Msa1382710:intron 20.0%
!! TATTCAAGGATAAAAGAATA+TGG + tig0020524:8245-8264 None:intergenic 20.0%
!!! TATTCTTTTATCCTTGAATA+TGG - tig0020524:8245-8264 Msa1382710:intron 20.0%
!!! CTTTTTGCTTATTATGTATT+TGG - tig0020524:8511-8530 Msa1382710:intron 20.0%
!!! TCAGTGATTTAATTTTTGAA+CGG - tig0020524:8819-8838 Msa1382710:intron 20.0%
!! AGATTTGAATTGAAATCTTA+TGG - tig0020524:9130-9149 Msa1382710:CDS 20.0%
!! AACTAATACGTGAAAAATAA+GGG + tig0020524:9239-9258 None:intergenic 20.0%
!!! GCTGATTCAAATATTTTAAA+AGG + tig0020524:9389-9408 None:intergenic 20.0%
!! ATTTACTAATCTCTTCTAAT+GGG + tig0020524:9451-9470 None:intergenic 20.0%
!! AATTTACTAATCTCTTCTAA+TGG + tig0020524:9452-9471 None:intergenic 20.0%
!! TTAGAATCAGATGAATATTT+AGG + tig0020524:9764-9783 None:intergenic 20.0%
!! AACCATCATTAAAATAAGAA+GGG + tig0020524:9817-9836 None:intergenic 20.0%
!! AAACCATCATTAAAATAAGA+AGG + tig0020524:9818-9837 None:intergenic 20.0%
!! AAATAATGTTTATCAAGACA+TGG + tig0020524:10587-10606 None:intergenic 20.0%
!!! TAAATAGTTAAGGGTATAAT+AGG + tig0020524:10791-10810 None:intergenic 20.0%
!! AGAGAGTAATAAATAGTTAA+GGG + tig0020524:10800-10819 None:intergenic 20.0%
!! AAGAGAGTAATAAATAGTTA+AGG + tig0020524:10801-10820 None:intergenic 20.0%
!! ACAAAATTGTCCTTAATAAA+TGG + tig0020524:10854-10873 None:intergenic 20.0%
!!! TTGTTATTGATAGTAAAAGA+AGG - tig0020524:11523-11542 Msa1382710:intron 20.0%
!!! ATATATTTTGAACATGCAAT+GGG + tig0020524:12033-12052 None:intergenic 20.0%
!!! TATATATTTTGAACATGCAA+TGG + tig0020524:12034-12053 None:intergenic 20.0%
!!! TGAAAGAGATAGTTTTTTAT+AGG + tig0020524:12071-12090 None:intergenic 20.0%
!! ACATAATAATAGATAGCATA+AGG + tig0020524:12397-12416 None:intergenic 20.0%
!!! TTTCTTTAAAAAAATGCTTG+AGG - tig0020524:12417-12436 Msa1382710:intron 20.0%
!! TATGGATAACATATAAATAG+TGG + tig0020524:12593-12612 None:intergenic 20.0%
!!! AATTTTAGTAATTACCTGAT+TGG + tig0020524:12631-12650 None:intergenic 20.0%
!! ATCAGGTAATTACTAAAATT+AGG - tig0020524:12631-12650 Msa1382710:intron 20.0%
!! TTAAAAACACTATAAGTTAC+TGG + tig0020524:12818-12837 None:intergenic 20.0%
!!! AGTAACTTATAGTGTTTTTA+AGG - tig0020524:12817-12836 Msa1382710:CDS 20.0%
!! TTAGAAAGAAATGTATAGAA+AGG + tig0020524:13096-13115 None:intergenic 20.0%
!! TACTAGATAAGAAATGATAT+AGG + tig0020524:13234-13253 None:intergenic 20.0%
! TAAAGAGGTTTATCATAAAC+AGG + tig0020524:7489-7508 None:intergenic 25.0%
!!! GATTTTGATGATTTGATCAA+TGG - tig0020524:7603-7622 Msa1382710:intron 25.0%
!! ATGATTTGATCAATGGATTT+GGG - tig0020524:7610-7629 Msa1382710:intron 25.0%
!! TTTTCAATTCTTACAAGTGT+CGG + tig0020524:7888-7907 None:intergenic 25.0%
!! AAAAGCTTTTGGTGAAATAT+TGG - tig0020524:8033-8052 Msa1382710:CDS 25.0%
!!! CATGTTTTATTATATAGTGC+AGG + tig0020524:8286-8305 None:intergenic 25.0%
! TAGTAGATCTTTCAAGAATA+TGG - tig0020524:8583-8602 Msa1382710:intron 25.0%
! AGTAGATCTTTCAAGAATAT+GGG - tig0020524:8584-8603 Msa1382710:intron 25.0%
! TAGACAACTGAAATAAATCT+TGG - tig0020524:8752-8771 Msa1382710:intron 25.0%
!!! TTTTTGAATTGGTTCATCAT+TGG - tig0020524:8844-8863 Msa1382710:intron 25.0%
! AATGTTCCTATTTGACTAAA+GGG + tig0020524:8876-8895 None:intergenic 25.0%
! AAATGTTCCTATTTGACTAA+AGG + tig0020524:8877-8896 None:intergenic 25.0%
!!! AGTGTTTTGTTTATAGCTTA+AGG - tig0020524:8958-8977 Msa1382710:CDS 25.0%
!!! GTGTTTTGTTTATAGCTTAA+GGG - tig0020524:8959-8978 Msa1382710:CDS 25.0%
! CTTCTTAAATAAAAATGCAC+AGG + tig0020524:9023-9042 None:intergenic 25.0%
!!! GTGCATTTTTATTTAAGAAG+TGG - tig0020524:9023-9042 Msa1382710:intron 25.0%
!!! AGTGGATTTATCATTTTATC+TGG - tig0020524:9041-9060 Msa1382710:intron 25.0%
! TTATCTGGTAGCTTATAAAA+CGG - tig0020524:9056-9075 Msa1382710:intron 25.0%
! CAATAACTTTCTTATTCCAT+AGG + tig0020524:9083-9102 None:intergenic 25.0%
! TTTAACAAACATGAAGAGAA+TGG - tig0020524:9181-9200 Msa1382710:CDS 25.0%
! TTAACAAACATGAAGAGAAT+GGG - tig0020524:9182-9201 Msa1382710:CDS 25.0%
! GGAATAAGAATAATCGAAAA+GGG - tig0020524:9203-9222 Msa1382710:CDS 25.0%
! CAACTAATACGTGAAAAATA+AGG + tig0020524:9240-9259 None:intergenic 25.0%
! GATAGTTCATCAAATTCTAA+TGG - tig0020524:9497-9516 Msa1382710:intron 25.0%
!! TTCAATTGATTCTTTATCTC+TGG + tig0020524:9651-9670 None:intergenic 25.0%
! ACCATCATTAAAATAAGAAG+GGG + tig0020524:9816-9835 None:intergenic 25.0%
! TCCAAAATATGAAGAAAAGT+TGG - tig0020524:9868-9887 Msa1382710:CDS 25.0%
!!! GATCATTTTCATTTTTTTGC+TGG + tig0020524:10489-10508 None:intergenic 25.0%
! TGTAAAGCGACTTATAATTT+GGG + tig0020524:10740-10759 None:intergenic 25.0%
! TTGTAAAGCGACTTATAATT+TGG + tig0020524:10741-10760 None:intergenic 25.0%
! TTGTCCTTAATAAATGGTAT+GGG + tig0020524:10848-10867 None:intergenic 25.0%
! ATTGTCCTTAATAAATGGTA+TGG + tig0020524:10849-10868 None:intergenic 25.0%
! TCCAAAACGTCATATAATTT+GGG - tig0020524:10938-10957 Msa1382710:CDS 25.0%
! GAAAGATCATCAACAATATT+AGG + tig0020524:11243-11262 None:intergenic 25.0%
! CTTCAAACCATAAAAGAAAA+GGG + tig0020524:11365-11384 None:intergenic 25.0%
! TTTGATATCTTGAAAGTGAA+AGG - tig0020524:11671-11690 Msa1382710:intron 25.0%
! AACTGAAAGAAAGAAAGAAA+TGG + tig0020524:11767-11786 None:intergenic 25.0%
!! AACCATTACCTTTTTATACT+AGG - tig0020524:11871-11890 Msa1382710:intron 25.0%
!!! CTTTTCTTTTTATTTGTGAC+CGG - tig0020524:11978-11997 Msa1382710:intron 25.0%
!!! TTTTCTTTTTATTTGTGACC+GGG - tig0020524:11979-11998 Msa1382710:intron 25.0%
! AATCATCCAACATAAAGATT+AGG + tig0020524:12140-12159 None:intergenic 25.0%
! CTTAGTACATACATATTGTA+AGG + tig0020524:12346-12365 None:intergenic 25.0%
! ATATGTATGTACTAAGTACT+TGG - tig0020524:12350-12369 Msa1382710:intron 25.0%
! TGGAAAATGCTTATACAATA+TGG + tig0020524:12611-12630 None:intergenic 25.0%
!! CTAAAATTAGGTGCATTTTA+AGG - tig0020524:12643-12662 Msa1382710:intron 25.0%
!!! AACTTATAGTGTTTTTAAGG+TGG - tig0020524:12820-12839 Msa1382710:CDS 25.0%
CGAATTCAGTAGCTAATAAA+CGG + tig0020524:7269-7288 None:intergenic 30.0%
CGTTTATTAGCTACTGAATT+CGG - tig0020524:7267-7286 Msa1382710:intron 30.0%
! GATGATTTGATCAATGGATT+TGG - tig0020524:7609-7628 Msa1382710:intron 30.0%
TTAATTAAGAAGTTACGCTC+AGG + tig0020524:7670-7689 None:intergenic 30.0%
!! ATGCTATATAGTTCTGATGA+AGG - tig0020524:8006-8025 Msa1382710:intron 30.0%
!! TGCTATATAGTTCTGATGAA+GGG - tig0020524:8007-8026 Msa1382710:intron 30.0%
! ATGAAGGGTTTAAAAGCTTT+TGG - tig0020524:8022-8041 Msa1382710:intron 30.0%
! GTGAAATATTGGTTAGAGAT+TGG - tig0020524:8044-8063 Msa1382710:CDS 30.0%
TTGTGTTTAAACTTAAGTGG+TGG - tig0020524:8113-8132 Msa1382710:intron 30.0%
!! CTTTTAAGAGGCTTTCATAT+AGG - tig0020524:8209-8228 Msa1382710:intron 30.0%
GCAGAATATTATCTATTTGC+TGG - tig0020524:8315-8334 Msa1382710:intron 30.0%
AACACTAAGATCAATTTCGA+AGG + tig0020524:8415-8434 None:intergenic 30.0%
TCGAAATTGATCTTAGTGTT+TGG - tig0020524:8415-8434 Msa1382710:intron 30.0%
TTTGCGAAAAACTGTATGTT+TGG - tig0020524:8539-8558 Msa1382710:intron 30.0%
AGGATACAAACAAACACATA+TGG + tig0020524:8633-8652 None:intergenic 30.0%
! TTGTATCCTATCATTTTGTG+TGG - tig0020524:8644-8663 Msa1382710:intron 30.0%
AGATTACCACACAAAATGAT+AGG + tig0020524:8653-8672 None:intergenic 30.0%
CAAACATACCATTGTTTGAA+AGG - tig0020524:8691-8710 Msa1382710:intron 30.0%
ACAACTGAAATAAATCTTGG+AGG - tig0020524:8755-8774 Msa1382710:intron 30.0%
! TTTGAACGGCATTTTTGAAT+TGG - tig0020524:8833-8852 Msa1382710:intron 30.0%
CTCATGAAGTTATAATGTGT+AGG + tig0020524:8940-8959 None:intergenic 30.0%
TCTGTAATGCTTTGTCTATT+AGG - tig0020524:9107-9126 Msa1382710:intron 30.0%
GGGAATAAGAATAATCGAAA+AGG - tig0020524:9202-9221 Msa1382710:CDS 30.0%
ATACGTGAAAAATAAGGGAT+CGG + tig0020524:9234-9253 None:intergenic 30.0%
TTAACTTATCGTTTCATCAC+AGG - tig0020524:9288-9307 Msa1382710:intron 30.0%
CAATTGAAAAATTGTCTGTG+AGG - tig0020524:9663-9682 Msa1382710:intron 30.0%
TTAAAATAAGAAGGGGAAGT+AGG + tig0020524:9809-9828 None:intergenic 30.0%
!!! TCCCCTTCTTATTTTAATGA+TGG - tig0020524:9812-9831 Msa1382710:CDS 30.0%
! GCCAACTTTTCTTCATATTT+TGG + tig0020524:9872-9891 None:intergenic 30.0%
AGAGCAAAGAAGAATTGAAA+GGG - tig0020524:10063-10082 Msa1382710:CDS 30.0%
AAAGAAGAATTGAAAGGGAA+AGG - tig0020524:10068-10087 Msa1382710:CDS 30.0%
! GACTTATAATTTGTGACGTA+GGG + tig0020524:10697-10716 None:intergenic 30.0%
! TGACTTATAATTTGTGACGT+AGG + tig0020524:10698-10717 None:intergenic 30.0%
CTTTCCCATACCATTTATTA+AGG - tig0020524:10841-10860 Msa1382710:CDS 30.0%
GTCCAAAACGTCATATAATT+TGG - tig0020524:10937-10956 Msa1382710:CDS 30.0%
! TCCCAAATTATATGACGTTT+TGG + tig0020524:10942-10961 None:intergenic 30.0%
AAACGTCATATAATTTGGGA+CGG - tig0020524:10942-10961 Msa1382710:CDS 30.0%
! ATGCAAAAAGTATGACTCTA+TGG + tig0020524:11100-11119 None:intergenic 30.0%
TTCTGTATCTCTTTACTTTC+AGG - tig0020524:11131-11150 Msa1382710:intron 30.0%
TGTGTCTTCAAACATAAAGA+GGG - tig0020524:11206-11225 Msa1382710:intron 30.0%
TCAACAATATTAGGTGATGA+TGG + tig0020524:11234-11253 None:intergenic 30.0%
! GATGATCTTTCCTCAATTTT+TGG - tig0020524:11252-11271 Msa1382710:intron 30.0%
GCAATATACTGTTATTGATG+TGG - tig0020524:11290-11309 Msa1382710:intron 30.0%
! TTTCCATCCCTTTTCTTTTA+TGG - tig0020524:11355-11374 Msa1382710:intron 30.0%
AAACCATAAAAGAAAAGGGA+TGG + tig0020524:11361-11380 None:intergenic 30.0%
GCTTCAAACCATAAAAGAAA+AGG + tig0020524:11366-11385 None:intergenic 30.0%
! ATTGATTCCTATAGAAGTGT+TGG - tig0020524:11597-11616 Msa1382710:intron 30.0%
!! TTGATTCCTATAGAAGTGTT+GGG - tig0020524:11598-11617 Msa1382710:intron 30.0%
! AGTGTTGGGATAAAGAATAA+AGG - tig0020524:11612-11631 Msa1382710:intron 30.0%
GTGTTGGGATAAAGAATAAA+GGG - tig0020524:11613-11632 Msa1382710:intron 30.0%
TGTTGGGATAAAGAATAAAG+GGG - tig0020524:11614-11633 Msa1382710:intron 30.0%
! TAACAACTAATGGATAGTGT+AGG + tig0020524:11722-11741 None:intergenic 30.0%
AGCATCTTAAAGAAAAGAGT+TGG + tig0020524:11792-11811 None:intergenic 30.0%
!!! CTTTTCTTTAAGATGCTAAC+TGG - tig0020524:11795-11814 Msa1382710:intron 30.0%
CATAGACAAACAATTTGAAG+AGG + tig0020524:11843-11862 None:intergenic 30.0%
TGCCTAGTATAAAAAGGTAA+TGG + tig0020524:11876-11895 None:intergenic 30.0%
! TACCTTTTTATACTAGGCAA+AGG - tig0020524:11877-11896 Msa1382710:intron 30.0%
CAACATAAAGATTAGGAAGT+TGG + tig0020524:12133-12152 None:intergenic 30.0%
CAACTTCCTAATCTTTATGT+TGG - tig0020524:12131-12150 Msa1382710:intron 30.0%
ATAAAAACCGTGCAAATTAG+CGG + tig0020524:12193-12212 None:intergenic 30.0%
!! TATCTACACATTGATTTCAG+AGG - tig0020524:12244-12263 Msa1382710:intron 30.0%
AGTACATACATATTGTAAGG+TGG + tig0020524:12343-12362 None:intergenic 30.0%
AGTGGAGGAATTTAAATTAC+TGG + tig0020524:12575-12594 None:intergenic 30.0%
GGATAACATATAAATAGTGG+AGG + tig0020524:12590-12609 None:intergenic 30.0%
! TGTATAAGCATTTTCCAATC+AGG - tig0020524:12614-12633 Msa1382710:intron 30.0%
TCAATTGACTGTGATTGATT+TGG + tig0020524:12714-12733 None:intergenic 30.0%
ATCACAGTCAATTGAAATGA+AGG - tig0020524:12719-12738 Msa1382710:intron 30.0%
! TTTCGGTGTACATTAAATCA+CGG + tig0020524:12761-12780 None:intergenic 30.0%
TGAATGATGATCAGGTATTA+TGG - tig0020524:12892-12911 Msa1382710:CDS 30.0%
! ATAAGCCTTTTTAACAGTAG+CGG + tig0020524:12964-12983 None:intergenic 30.0%
! AATATATTTCTGCTGAAGAG+TGG + tig0020524:13036-13055 None:intergenic 30.0%
GCAGAAATATATTGCAGAAA+AGG - tig0020524:13043-13062 Msa1382710:CDS 30.0%
! AAAGGTTTTCGATCTACTAA+AGG - tig0020524:13061-13080 Msa1382710:CDS 30.0%
GCCAGTTGAAAATAATGATT+AGG - tig0020524:13144-13163 Msa1382710:five_prime_UTR 30.0%
! GCCTAATCATTATTTTCAAC+TGG + tig0020524:13148-13167 None:intergenic 30.0%
TATTCTCATGTAACTGAGTT+TGG - tig0020524:13255-13274 Msa1382710:five_prime_UTR 30.0%
! TTGGATGATGATGATGACAT+TGG + tig0020524:7318-7337 None:intergenic 35.0%
ATGTCATCATCATCATCCAA+AGG - tig0020524:7318-7337 Msa1382710:CDS 35.0%
!! AGAGGAAGTTTTGGTGAAAT+TGG + tig0020524:7349-7368 None:intergenic 35.0%
ATCATGATTGGAAGAGTGAA+AGG + tig0020524:7397-7416 None:intergenic 35.0%
GGGATTAGAATTGAAGAGAT+CGG + tig0020524:7421-7440 None:intergenic 35.0%
ATTCGGTCATTCGAAGAAAA+CGG - tig0020524:7557-7576 Msa1382710:intron 35.0%
! TTTGCTTGCATTTGAAGCAA+CGG - tig0020524:7766-7785 Msa1382710:intron 35.0%
TATCAATAAACCTCAACCTC+AGG + tig0020524:7831-7850 None:intergenic 35.0%
! TATAGCATCGAAACTTCTGA+TGG + tig0020524:7994-8013 None:intergenic 35.0%
!! AAAATGCACTGATTCTCCAA+TGG + tig0020524:8072-8091 None:intergenic 35.0%
TGAAAGCCTCTTAAAAGACA+GGG + tig0020524:8206-8225 None:intergenic 35.0%
ATGAAAGCCTCTTAAAAGAC+AGG + tig0020524:8207-8226 None:intergenic 35.0%
CTTGTGAACTTCCATATTCA+AGG + tig0020524:8259-8278 None:intergenic 35.0%
GTTATCCTTGCAGTTAAACA+AGG - tig0020524:8337-8356 Msa1382710:intron 35.0%
! GTATTCCTTGTTTAACTGCA+AGG + tig0020524:8345-8364 None:intergenic 35.0%
TGCAGTTAAACAAGGAATAC+TGG - tig0020524:8345-8364 Msa1382710:intron 35.0%
TAGTGTTTGGATCTCAAAAG+TGG - tig0020524:8428-8447 Msa1382710:CDS 35.0%
GATCTCAAAAGTGGCTATAA+TGG - tig0020524:8437-8456 Msa1382710:CDS 35.0%
ATTTGCCGAACATTAAGAGT+TGG - tig0020524:8461-8480 Msa1382710:CDS 35.0%
CCAAACCAACTCTTAATGTT+CGG + tig0020524:8469-8488 None:intergenic 35.0%
!! AACATTAAGAGTTGGTTTGG+AGG - tig0020524:8469-8488 Msa1382710:CDS 35.0%
!! ACATTAAGAGTTGGTTTGGA+GGG - tig0020524:8470-8489 Msa1382710:CDS 35.0%
ACCATTGTTTGAAAGGTAAC+AGG - tig0020524:8698-8717 Msa1382710:intron 35.0%
AAATCTTGGAGGAGTTTGTA+AGG - tig0020524:8766-8785 Msa1382710:intron 35.0%
AATCTTGGAGGAGTTTGTAA+GGG - tig0020524:8767-8786 Msa1382710:intron 35.0%
! TTGAATTGGTTCATCATTGG+TGG - tig0020524:8847-8866 Msa1382710:intron 35.0%
GTGTAGGTACAAGATTTCAT+TGG + tig0020524:8924-8943 None:intergenic 35.0%
! AAGGGTTCTTATTTCAGTAG+TGG - tig0020524:8977-8996 Msa1382710:CDS 35.0%
!!! TAGTGGATTTTTCTTCTCAG+CGG - tig0020524:8994-9013 Msa1382710:intron 35.0%
TAGCTTATAAAACGGACCTA+TGG - tig0020524:9064-9083 Msa1382710:intron 35.0%
TTAAACGAAATGCGATGCTT+AGG + tig0020524:9166-9185 None:intergenic 35.0%
! TCTGATGATGAACCAATATC+AGG + tig0020524:9320-9339 None:intergenic 35.0%
! GATGATACTGATCCTTTTGA+TGG - tig0020524:9530-9549 Msa1382710:intron 35.0%
GAATTTCCAAGTCCATCAAA+AGG + tig0020524:9545-9564 None:intergenic 35.0%
TTGTTATGTGTTCGTCTATC+AGG + tig0020524:9692-9711 None:intergenic 35.0%
GAATATTTAGGCATGCCATA+TGG + tig0020524:9752-9771 None:intergenic 35.0%
GATTCTAATAAACCAGTAGC+TGG - tig0020524:9776-9795 Msa1382710:intron 35.0%
TCATGACGATATATGGCTAA+CGG - tig0020524:9898-9917 Msa1382710:CDS 35.0%
! GAAGTTGGTTGTGTAAAAAG+AGG + tig0020524:9935-9954 None:intergenic 35.0%
GAGAGCAAAGAAGAATTGAA+AGG - tig0020524:10062-10081 Msa1382710:CDS 35.0%
AAGAATTGAAAGGGAAAGGA+AGG - tig0020524:10072-10091 Msa1382710:CDS 35.0%
GGAAAGAGAAAATGAAAGAC+AGG - tig0020524:10126-10145 Msa1382710:CDS 35.0%
!! TAACTCTTGGCTTTGATGTT+TGG - tig0020524:10620-10639 Msa1382710:CDS 35.0%
ATGTTTGAAGACACAGTTGT+AGG + tig0020524:11201-11220 None:intergenic 35.0%
CTGTGTCTTCAAACATAAAG+AGG - tig0020524:11205-11224 Msa1382710:intron 35.0%
!! GATCTTTCCTCAATTTTTGG+AGG - tig0020524:11255-11274 Msa1382710:intron 35.0%
!! TTTCCTCAATTTTTGGAGGT+AGG - tig0020524:11259-11278 Msa1382710:intron 35.0%
AATCCTACCTCCAAAAATTG+AGG + tig0020524:11265-11284 None:intergenic 35.0%
!! TTTTTGGAGGTAGGATTTTG+TGG - tig0020524:11268-11287 Msa1382710:intron 35.0%
GAGAATTTCAGGAAGTTGAA+GGG - tig0020524:11400-11419 Msa1382710:intron 35.0%
AGAATTTCAGGAAGTTGAAG+GGG - tig0020524:11401-11420 Msa1382710:intron 35.0%
AAGAAGGCAACCAATAGTAA+AGG - tig0020524:11539-11558 Msa1382710:intron 35.0%
CTTTATCCCAACACTTCTAT+AGG + tig0020524:11607-11626 None:intergenic 35.0%
TGCCTTTGCCTAGTATAAAA+AGG + tig0020524:11882-11901 None:intergenic 35.0%
! TTTATACTAGGCAAAGGCAT+TGG - tig0020524:11883-11902 Msa1382710:intron 35.0%
GTTGGATGATTGTGATTAGT+TGG - tig0020524:12149-12168 Msa1382710:intron 35.0%
AGATTCACGAAGGAACATTT+CGG + tig0020524:12778-12797 None:intergenic 35.0%
! CTATAAGTTACTGGAGTGTT+TGG + tig0020524:12809-12828 None:intergenic 35.0%
TACCTGATCATCATTCATGA+AGG + tig0020524:12889-12908 None:intergenic 35.0%
GGTTTCCACATAAGAATTTG+TGG - tig0020524:13186-13205 Msa1382710:five_prime_UTR 35.0%
TTTGGCCACAAATTCTTATG+TGG + tig0020524:13194-13213 None:intergenic 35.0%
!!! GTAACTGAGTTTGGTTTTCT+AGG - tig0020524:13264-13283 Msa1382710:five_prime_UTR 35.0%
AAATCGTTCATCGTGAGATC+TGG + tig0020524:7243-7262 None:intergenic 40.0%
! GAATTCGGTTTGAAACCTCA+AGG - tig0020524:7282-7301 Msa1382710:intron 40.0%
GGTGAAATTGGAAGATCCTT+TGG + tig0020524:7337-7356 None:intergenic 40.0%
! GAAGTTGAGAGAGGAAGTTT+TGG + tig0020524:7358-7377 None:intergenic 40.0%
ATGTGAATCGAAGTTGAGAG+AGG + tig0020524:7367-7386 None:intergenic 40.0%
ATTGGAAGAGTGAAAGGATC+GGG + tig0020524:7391-7410 None:intergenic 40.0%
GATTGGAAGAGTGAAAGGAT+CGG + tig0020524:7392-7411 None:intergenic 40.0%
GAAGAGATCGGAATCATGAT+TGG + tig0020524:7409-7428 None:intergenic 40.0%
! ATCATAAACAGGCGAGTTGA+CGG + tig0020524:7478-7497 None:intergenic 40.0%
GAGAAGATCATCAAACGCAA+CGG + tig0020524:7532-7551 None:intergenic 40.0%
! GTTGCGTTTGATGATCTTCT+CGG - tig0020524:7531-7550 Msa1382710:intron 40.0%
AAAACGGTGAAGAATGAGAG+AGG - tig0020524:7573-7592 Msa1382710:intron 40.0%
! CATATTTGTTGGTGTCTTGC+CGG - tig0020524:7929-7948 Msa1382710:intron 40.0%
CTTCTGATGGAAGACATGTT+TGG + tig0020524:7981-8000 None:intergenic 40.0%
! AAGTGGTGGAGACACATAAT+TGG - tig0020524:8127-8146 Msa1382710:intron 40.0%
AGACAGGGAATGCATGATAT+CGG + tig0020524:8191-8210 None:intergenic 40.0%
! TGCATTCCCTGTCTTTTAAG+AGG - tig0020524:8197-8216 Msa1382710:intron 40.0%
TAATCTACTGACGACATTGC+AGG + tig0020524:8371-8390 None:intergenic 40.0%
! CCGAACATTAAGAGTTGGTT+TGG - tig0020524:8466-8485 Msa1382710:CDS 40.0%
GCCTGTTACCTTTCAAACAA+TGG + tig0020524:8702-8721 None:intergenic 40.0%
ATCTTGGAGGAGTTTGTAAG+GGG - tig0020524:8768-8787 Msa1382710:intron 40.0%
TGGACTCCCTTTAGTCAAAT+AGG - tig0020524:8867-8886 Msa1382710:intron 40.0%
GATGAACCAATATCAGGAGT+GGG + tig0020524:9314-9333 None:intergenic 40.0%
TGATGAACCAATATCAGGAG+TGG + tig0020524:9315-9334 None:intergenic 40.0%
AAAAGGGTCTTCTGTTGCAT+TGG + tig0020524:9372-9391 None:intergenic 40.0%
! CTTCTAATGGGTCTGAAAAG+TGG + tig0020524:9439-9458 None:intergenic 40.0%
!!! ACTGATCCTTTTGATGGACT+TGG - tig0020524:9536-9555 Msa1382710:intron 40.0%
! TACCAGCATTTTCATCAGAG+AGG - tig0020524:9567-9586 Msa1382710:intron 40.0%
GATTCCTGTTGAACATGATC+AGG - tig0020524:9712-9731 Msa1382710:intron 40.0%
AACTCCTGATCATGTTCAAC+AGG + tig0020524:9719-9738 None:intergenic 40.0%
!! GTTTTAGACCCGTCAATTCT+CGG - tig0020524:9834-9853 Msa1382710:CDS 40.0%
! TTTTAGACCCGTCAATTCTC+GGG - tig0020524:9835-9854 Msa1382710:CDS 40.0%
CCATATATCGTCATGATCTG+AGG + tig0020524:9894-9913 None:intergenic 40.0%
CCTCAGATCATGACGATATA+TGG - tig0020524:9891-9910 Msa1382710:CDS 40.0%
!! TCTGACTTGGGAATATGTAC+TGG + tig0020524:9992-10011 None:intergenic 40.0%
AGTACATATTCCCAAGTCAG+AGG - tig0020524:9991-10010 Msa1382710:CDS 40.0%
AGAACAACAGAGACTTGAGA+GGG - tig0020524:10105-10124 Msa1382710:CDS 40.0%
AGAAAATGAAAGACAGGCTG+TGG - tig0020524:10132-10151 Msa1382710:CDS 40.0%
ATACTAAAGCGGCTAACTCT+TGG - tig0020524:10607-10626 Msa1382710:CDS 40.0%
! GTCATATAATTTGGGACGGA+GGG - tig0020524:10946-10965 Msa1382710:CDS 40.0%
AAGACACAGTTGTAGGTTTC+TGG + tig0020524:11194-11213 None:intergenic 40.0%
GGAGAATTTCAGGAAGTTGA+AGG - tig0020524:11399-11418 Msa1382710:intron 40.0%
TTGAAGGGGAAAGTGAAGAA+AGG - tig0020524:11415-11434 Msa1382710:intron 40.0%
AGGCAACCAATAGTAAAGGA+AGG - tig0020524:11543-11562 Msa1382710:intron 40.0%
TGGTTGCCTTCCTTTACTAT+TGG + tig0020524:11552-11571 None:intergenic 40.0%
GAATAAAGGGGAGTTAGAGA+AGG - tig0020524:11626-11645 Msa1382710:intron 40.0%
! CATTGGCTGAGAAGAATCAA+CGG - tig0020524:11900-11919 Msa1382710:intron 40.0%
ATTGGCTGAGAAGAATCAAC+GGG - tig0020524:11901-11920 Msa1382710:intron 40.0%
!! TCTTTTTATTTGTGACCGGG+TGG - tig0020524:11982-12001 Msa1382710:intron 40.0%
CTGACACAGATGCATGTATT+GGG + tig0020524:12102-12121 None:intergenic 40.0%
!! ACATTGATTTCAGAGGCTTG+CGG - tig0020524:12251-12270 Msa1382710:intron 40.0%
AAGTACTTGGTATAATGCCC+AGG - tig0020524:12363-12382 Msa1382710:intron 40.0%
AGTACTTGGTATAATGCCCA+GGG - tig0020524:12364-12383 Msa1382710:intron 40.0%
AGCAATGAGGTGATTAGATG+AGG + tig0020524:12471-12490 None:intergenic 40.0%
TACAACATTGTCCACTGAGT+AGG + tig0020524:12494-12513 None:intergenic 40.0%
TACTACAGTGCTCTGTAAAG+AGG + tig0020524:12678-12697 None:intergenic 40.0%
CTCCTTCATGAATGATGATC+AGG - tig0020524:12884-12903 Msa1382710:CDS 40.0%
TATTATGGCCTGAATGTGGT+TGG - tig0020524:12907-12926 Msa1382710:CDS 40.0%
TACAGCCGCTACTGTTAAAA+AGG - tig0020524:12956-12975 Msa1382710:CDS 40.0%
AACCCACATGTAGATAACAG+TGG + tig0020524:13170-13189 None:intergenic 40.0%
GTGCATTACATGCACACATT+TGG + tig0020524:13212-13231 None:intergenic 40.0%
CAGTTAGAGGAAGAGAAGGA+GGG + tig0020524:7179-7198 None:intergenic 45.0%
TCAGCAGTTAGAGGAAGAGA+AGG + tig0020524:7183-7202 None:intergenic 45.0%
TCATCGTGAGATCTGGTGAA+CGG + tig0020524:7236-7255 None:intergenic 45.0%
ATTGGTGCAGATTTGCCTTG+AGG + tig0020524:7300-7319 None:intergenic 45.0%
! GTGAAGAATGAGAGAGGTGT+CGG - tig0020524:7579-7598 Msa1382710:intron 45.0%
TCAGTAACCACACCTTTGAC+GGG + tig0020524:7646-7665 None:intergenic 45.0%
CTCAGTAACCACACCTTTGA+CGG + tig0020524:7647-7666 None:intergenic 45.0%
GGTAGCGTATGATCTAGTGA+AGG - tig0020524:7787-7806 Msa1382710:intron 45.0%
ATGTAGTGAGACTGAACCTG+AGG - tig0020524:7812-7831 Msa1382710:intron 45.0%
! TGGTTAGAGATTGGCTCCAT+TGG - tig0020524:8053-8072 Msa1382710:CDS 45.0%
! GGAGTTTGTAAGGGGTACAT+AGG - tig0020524:8776-8795 Msa1382710:intron 45.0%
TGAGGATGAATCAGTTGGAG+CGG + tig0020524:9414-9433 None:intergenic 45.0%
GTCCTCTCTGATGAAAATGC+TGG + tig0020524:9572-9591 None:intergenic 45.0%
! TCAGAGAGGACTAGCAGATA+TGG - tig0020524:9581-9600 Msa1382710:intron 45.0%
TTGTGTTTGACCACGGTGTT+GGG + tig0020524:9616-9635 None:intergenic 45.0%
CCTGAACTTGTGTTTGACCA+CGG + tig0020524:9623-9642 None:intergenic 45.0%
GGTCAAACACAAGTTCAGGT+TGG - tig0020524:9624-9643 Msa1382710:intron 45.0%
GAGTTTCATCAAGCGCCATA+TGG - tig0020524:9734-9753 Msa1382710:intron 45.0%
AAGAAGGGGAAGTAGGCATT+TGG + tig0020524:9802-9821 None:intergenic 45.0%
ATATCTGCCCGAGAATTGAC+GGG + tig0020524:9845-9864 None:intergenic 45.0%
CATATCTGCCCGAGAATTGA+CGG + tig0020524:9846-9865 None:intergenic 45.0%
! TTGGGAATATGTACTGGTCG+AGG + tig0020524:9986-10005 None:intergenic 45.0%
AAACCATGAGCAGCAGCAAA+AGG - tig0020524:10027-10046 Msa1382710:CDS 45.0%
GAGAACAACAGAGACTTGAG+AGG - tig0020524:10104-10123 Msa1382710:CDS 45.0%
TGCTGCTGAGGCAAAGAAAA+GGG - tig0020524:10306-10325 Msa1382710:CDS 45.0%
GGCAAAGAAAAGGGCTGAAA+AGG - tig0020524:10315-10334 Msa1382710:CDS 45.0%
TTGAATCGTTCTTCAGCGTG+AGG - tig0020524:10509-10528 Msa1382710:CDS 45.0%
TGAATCGTTCTTCAGCGTGA+GGG - tig0020524:10510-10529 Msa1382710:CDS 45.0%
ACAGAAGAGTTAGACCTAGG+AGG + tig0020524:10559-10578 None:intergenic 45.0%
CTCACAGAAGAGTTAGACCT+AGG + tig0020524:10562-10581 None:intergenic 45.0%
! CGTCATATAATTTGGGACGG+AGG - tig0020524:10945-10964 Msa1382710:CDS 45.0%
TGATGCACAATTTCAGCCAG+AGG - tig0020524:11164-11183 Msa1382710:intron 45.0%
!! GTAGGTTTCTGGTTTACCTC+TGG + tig0020524:11183-11202 None:intergenic 45.0%
TCCTGAAATTCTCCAGCTGA+GGG + tig0020524:11393-11412 None:intergenic 45.0%
TTCCTGAAATTCTCCAGCTG+AGG + tig0020524:11394-11413 None:intergenic 45.0%
AGAAAGGCGAAAAGCCAGAT+TGG - tig0020524:11431-11450 Msa1382710:intron 45.0%
AGGAGAGAGTCTCTTCTCTA+AGG + tig0020524:11702-11721 None:intergenic 45.0%
TCTGCTCTCTTTGAGTCTGT+AGG + tig0020524:11928-11947 None:intergenic 45.0%
CCTGACACAGATGCATGTAT+TGG + tig0020524:12103-12122 None:intergenic 45.0%
CCAATACATGCATCTGTGTC+AGG - tig0020524:12100-12119 Msa1382710:intron 45.0%
GTGCAAATTAGCGGAGAACT+CGG + tig0020524:12184-12203 None:intergenic 45.0%
! GAGTTCTCCGCTAATTTGCA+CGG - tig0020524:12183-12202 Msa1382710:intron 45.0%
!! TGGACTTTGAAGTTAAGCGC+TGG - tig0020524:12280-12299 Msa1382710:intron 45.0%
!! GGACTTTGAAGTTAAGCGCT+GGG - tig0020524:12281-12300 Msa1382710:intron 45.0%
TCATTCGCTCTGCTCATTAC+AGG - tig0020524:12544-12563 Msa1382710:intron 45.0%
CAGGTATTATGGCCTGAATG+TGG - tig0020524:12903-12922 Msa1382710:CDS 45.0%
TCCTGATAAAGTGCAGCAGA+AGG - tig0020524:13007-13026 Msa1382710:CDS 45.0%
CCTGATAAAGTGCAGCAGAA+GGG - tig0020524:13008-13027 Msa1382710:CDS 45.0%
AGGCCACTGTTATCTACATG+TGG - tig0020524:13164-13183 Msa1382710:five_prime_UTR 45.0%
GGCCACTGTTATCTACATGT+GGG - tig0020524:13165-13184 Msa1382710:five_prime_UTR 45.0%
GCAGTTAGAGGAAGAGAAGG+AGG + tig0020524:7180-7199 None:intergenic 50.0%
TTTCTTCCGTCTACGGTGGT+CGG + tig0020524:7210-7229 None:intergenic 50.0%
ACGGTGGTTTCTTCCGTCTA+CGG + tig0020524:7217-7236 None:intergenic 50.0%
GACGGACATGGAATCGAAAC+CGG + tig0020524:7460-7479 None:intergenic 50.0%
CCTCTTTACGACGACGATGA+CGG - tig0020524:7501-7520 Msa1382710:intron 50.0%
! GCGTTTGATGATCTTCTCGG+CGG - tig0020524:7534-7553 Msa1382710:intron 50.0%
! GATGATCTTCTCGGCGGATT+CGG - tig0020524:7540-7559 Msa1382710:intron 50.0%
TGAGACTGAACCTGAGGTTG+AGG - tig0020524:7818-7837 Msa1382710:intron 50.0%
CACGTGTCAGTGTCAAACAC+CGG + tig0020524:7951-7970 None:intergenic 50.0%
CAGGGAATGCATGATATCGG+TGG + tig0020524:8188-8207 None:intergenic 50.0%
!! GAGTTGGTTTGGAGGGAAAG+AGG - tig0020524:8477-8496 Msa1382710:intron 50.0%
AGGGTCTTCTGTTGCATTGG+AGG + tig0020524:9369-9388 None:intergenic 50.0%
! GCTCCAACTGATTCATCCTC+AGG - tig0020524:9413-9432 Msa1382710:intron 50.0%
TGGCCTGAGGATGAATCAGT+TGG + tig0020524:9419-9438 None:intergenic 50.0%
! TGTGTTTGACCACGGTGTTG+GGG + tig0020524:9615-9634 None:intergenic 50.0%
CTTGTGTTTGACCACGGTGT+TGG + tig0020524:9617-9636 None:intergenic 50.0%
CCGTGGTCAAACACAAGTTC+AGG - tig0020524:9620-9639 Msa1382710:intron 50.0%
! ATATGTACTGGTCGAGGAGG+AGG + tig0020524:9980-9999 None:intergenic 50.0%
! GGAATATGTACTGGTCGAGG+AGG + tig0020524:9983-10002 None:intergenic 50.0%
CTGCTTCTCTCCTCTGACTT+GGG + tig0020524:10004-10023 None:intergenic 50.0%
ACTGCTTCTCTCCTCTGACT+TGG + tig0020524:10005-10024 None:intergenic 50.0%
! TCTCCTTTTGCTGCTGCTCA+TGG + tig0020524:10033-10052 None:intergenic 50.0%
TGAGCAGCAGCAAAAGGAGA+TGG - tig0020524:10033-10052 Msa1382710:CDS 50.0%
AAGCTAGAGTGCGTGCTGAA+AGG - tig0020524:10242-10261 Msa1382710:CDS 50.0%
AGCTAGAGTGCGTGCTGAAA+GGG - tig0020524:10243-10262 Msa1382710:CDS 50.0%
ACAAGCTGAAGCCCGTGAAA+GGG - tig0020524:10282-10301 Msa1382710:CDS 50.0%
CTGCTGCTGAGGCAAAGAAA+AGG - tig0020524:10305-10324 Msa1382710:CDS 50.0%
! TAAAGCAGAACGTGCTGCTG+TGG - tig0020524:10411-10430 Msa1382710:CDS 50.0%
! AGAACGTGCTGCTGTGGAAA+GGG - tig0020524:10417-10436 Msa1382710:CDS 50.0%
GAATCGTTCTTCAGCGTGAG+GGG - tig0020524:10511-10530 Msa1382710:CDS 50.0%
! TTTGAAGCATCTCCCTCAGC+TGG - tig0020524:11378-11397 Msa1382710:intron 50.0%
TCCCTCAGCTGGAGAATTTC+AGG - tig0020524:11389-11408 Msa1382710:intron 50.0%
CAGATTGGAACGCCTTCAGA+GGG - tig0020524:11446-11465 Msa1382710:intron 50.0%
CTGTATGAGCAGAAACCACC+CGG + tig0020524:12000-12019 None:intergenic 50.0%
AGCATAAGGCAGCAAACCCT+GGG + tig0020524:12383-12402 None:intergenic 50.0%
TAGCATAAGGCAGCAAACCC+TGG + tig0020524:12384-12403 None:intergenic 50.0%
ACCTCATTGCTCCTACTCAG+TGG - tig0020524:12480-12499 Msa1382710:intron 50.0%
TCCACTGAGTAGGAGCAATG+AGG + tig0020524:12484-12503 None:intergenic 50.0%
GGCTGCTTCAAGATTCACGA+AGG + tig0020524:12788-12807 None:intergenic 50.0%
CCCTTCTGCTGCACTTTATC+AGG + tig0020524:13011-13030 None:intergenic 50.0%
GTCGGTGGATCAGCAGTTAG+AGG + tig0020524:7192-7211 None:intergenic 55.0%
GTGGTTTCTTCCGTCTACGG+TGG + tig0020524:7214-7233 None:intergenic 55.0%
TCGTGAGATCTGGTGAACGG+TGG + tig0020524:7233-7252 None:intergenic 55.0%
GGACATGGAATCGAAACCGG+AGG + tig0020524:7457-7476 None:intergenic 55.0%
! AACAGGCGAGTTGACGGACA+TGG + tig0020524:7472-7491 None:intergenic 55.0%
CCGTCATCGTCGTCGTAAAG+AGG + tig0020524:7504-7523 None:intergenic 55.0%
GGAACAAGTCCTCCCGTCAA+AGG - tig0020524:7631-7650 Msa1382710:intron 55.0%
AAGTCCTCCCGTCAAAGGTG+TGG - tig0020524:7636-7655 Msa1382710:intron 55.0%
GTAACCACACCTTTGACGGG+AGG + tig0020524:7643-7662 None:intergenic 55.0%
!! CAAGTGTCGGCGTGTGAGTA+TGG + tig0020524:7875-7894 None:intergenic 55.0%
CACAGGCCCACTCCTGATAT+TGG - tig0020524:9305-9324 Msa1382710:intron 55.0%
TGGGTCTGAAAAGTGGCCTG+AGG + tig0020524:9432-9451 None:intergenic 55.0%
! TGACCACGGTGTTGGGGAAT+CGG + tig0020524:9609-9628 None:intergenic 55.0%
GTAGGCATTTGGCCAGCTAC+TGG + tig0020524:9791-9810 None:intergenic 55.0%
!! GAAGGTGGTGGAGCAGAAGT+TGG + tig0020524:9950-9969 None:intergenic 55.0%
GCAGCAGCAAAAGGAGATGG+AGG - tig0020524:10036-10055 Msa1382710:CDS 55.0%
AGCTCGCCAAAGAGCTGAGA+AGG - tig0020524:10195-10214 Msa1382710:CDS 55.0%
CAGCAGCCTTCTCAGCTCTT+TGG + tig0020524:10204-10223 None:intergenic 55.0%
TGAAAGGGCCGCTGTTCAGA+GGG - tig0020524:10258-10277 Msa1382710:CDS 55.0%
AGCTTGTGCCCTCTGAACAG+CGG + tig0020524:10269-10288 None:intergenic 55.0%
CACAAGCTGAAGCCCGTGAA+AGG - tig0020524:10281-10300 Msa1382710:CDS 55.0%
AAAGGCTGCTGCAGGGGAAA+AGG - tig0020524:10333-10352 Msa1382710:CDS 55.0%
GAGAAAGAGCTGCAGCTGCA+AGG - tig0020524:10368-10387 Msa1382710:CDS 55.0%
! CAGAACGTGCTGCTGTGGAA+AGG - tig0020524:10416-10435 Msa1382710:CDS 55.0%
AGCAGCTGCAGCTCTTTCTC+GGG + tig0020524:10455-10474 None:intergenic 55.0%
CAGCAGCTGCAGCTCTTTCT+CGG + tig0020524:10456-10475 None:intergenic 55.0%
GAGTTAGACCTAGGAGGCCT+TGG + tig0020524:10553-10572 None:intergenic 55.0%
!! CCTCTGAAGGCGTTCCAATC+TGG + tig0020524:11448-11467 None:intergenic 55.0%
CCAGATTGGAACGCCTTCAG+AGG - tig0020524:11445-11464 Msa1382710:intron 55.0%
TCAGAGGCTTGCGGAAACAC+TGG - tig0020524:12260-12279 Msa1382710:intron 55.0%
!! AAGTTAAGCGCTGGGCTGCA+GGG - tig0020524:12289-12308 Msa1382710:intron 55.0%
ATGGCCTGAATGTGGTTGGC+AGG - tig0020524:12911-12930 Msa1382710:CDS 55.0%
ACTGCCTGCCAACCACATTC+AGG + tig0020524:12918-12937 None:intergenic 55.0%
GATCCACCGACCACCGTAGA+CGG - tig0020524:7201-7220 Msa1382710:intron 60.0%
!! CCGGAGGTGCTACGAGAGAT+GGG + tig0020524:7441-7460 None:intergenic 60.0%
CCCATCTCTCGTAGCACCTC+CGG - tig0020524:7438-7457 Msa1382710:CDS 60.0%
!! ACCGGAGGTGCTACGAGAGA+TGG + tig0020524:7442-7461 None:intergenic 60.0%
! GGAGGTGGTCTTGAAGGTGG+TGG + tig0020524:9962-9981 None:intergenic 60.0%
! GGAGGAGGTGGTCTTGAAGG+TGG + tig0020524:9965-9984 None:intergenic 60.0%
! CGAGGAGGAGGTGGTCTTGA+AGG + tig0020524:9968-9987 None:intergenic 60.0%
! TGTACTGGTCGAGGAGGAGG+TGG + tig0020524:9977-9996 None:intergenic 60.0%
CTGAAAGGGCCGCTGTTCAG+AGG - tig0020524:10257-10276 Msa1382710:CDS 60.0%
CTCAGCAGCAGCCCTTTCAC+GGG + tig0020524:10296-10315 None:intergenic 60.0%
CCTCAGCAGCAGCCCTTTCA+CGG + tig0020524:10297-10316 None:intergenic 60.0%
AGGGCTGAAAAGGCTGCTGC+AGG - tig0020524:10325-10344 Msa1382710:CDS 60.0%
GGGCTGAAAAGGCTGCTGCA+GGG - tig0020524:10326-10345 Msa1382710:CDS 60.0%
GGCTGAAAAGGCTGCTGCAG+GGG - tig0020524:10327-10346 Msa1382710:CDS 60.0%
TGTGGAAAGGGCTGCTGCAG+AGG - tig0020524:10429-10448 Msa1382710:CDS 60.0%
CGTTCTTCAGCGTGAGGGGA+CGG - tig0020524:10515-10534 Msa1382710:CDS 60.0%
GTTCTTCAGCGTGAGGGGAC+GGG - tig0020524:10516-10535 Msa1382710:CDS 60.0%
! AGGAGGCCTTGGAGCGCTAT+TGG + tig0020524:10542-10561 None:intergenic 60.0%
ATAGCGCTCCAAGGCCTCCT+AGG - tig0020524:10542-10561 Msa1382710:CDS 60.0%
!! GAAGTTAAGCGCTGGGCTGC+AGG - tig0020524:12288-12307 Msa1382710:intron 60.0%
CTTCCGTCTACGGTGGTCGG+TGG + tig0020524:7207-7226 None:intergenic 65.0%
!! GCACCGATTCCCCAACACCG+TGG - tig0020524:9603-9622 Msa1382710:intron 65.0%
CCGTGAAAGGGCTGCTGCTG+AGG - tig0020524:10294-10313 Msa1382710:CDS 65.0%
GACGGGCCAATAGCGCTCCA+AGG - tig0020524:10533-10552 Msa1382710:CDS 65.0%
GGAACGCCTTCAGAGGGCTC+AGG - tig0020524:11452-11471 Msa1382710:intron 65.0%
CGCTGGGCTGCAGGGAAAGA+GGG - tig0020524:12297-12316 Msa1382710:intron 65.0%
GCTGGGCTGCAGGGAAAGAG+GGG - tig0020524:12298-12317 Msa1382710:intron 65.0%
CGCGCTCCTGAGCCCTCTGA+AGG + tig0020524:11461-11480 None:intergenic 70.0%
! TCAGAGGGCTCAGGAGCGCG+CGG - tig0020524:11461-11480 Msa1382710:intron 70.0%
GCGCTGGGCTGCAGGGAAAG+AGG - tig0020524:12296-12315 Msa1382710:intron 70.0%
Chromosome Type Strat End Strand Name
tig0020524 gene 7075 13309 7075 ID=Msa1382710;Name=Msa1382710
tig0020524 mRNA 7075 13309 7075 ID=Msa1382710-mRNA-1;Parent=Msa1382710;Name=Msa1382710-mRNA-1;_AED=0.17;_eAED=0.17;_QI=177|0.85|0.87|0.87|1|1|8|0|748
tig0020524 exon 7075 7098 7075 ID=Msa1382710-mRNA-1:exon:8337;Parent=Msa1382710-mRNA-1
tig0020524 exon 7302 7478 7302 ID=Msa1382710-mRNA-1:exon:8336;Parent=Msa1382710-mRNA-1
tig0020524 exon 8031 8120 8031 ID=Msa1382710-mRNA-1:exon:8335;Parent=Msa1382710-mRNA-1
tig0020524 exon 8426 8491 8426 ID=Msa1382710-mRNA-1:exon:8334;Parent=Msa1382710-mRNA-1
tig0020524 exon 8902 8999 8902 ID=Msa1382710-mRNA-1:exon:8333;Parent=Msa1382710-mRNA-1
tig0020524 exon 9108 9231 9108 ID=Msa1382710-mRNA-1:exon:8332;Parent=Msa1382710-mRNA-1
tig0020524 exon 9808 11074 9808 ID=Msa1382710-mRNA-1:exon:8331;Parent=Msa1382710-mRNA-1
tig0020524 exon 12732 13309 12732 ID=Msa1382710-mRNA-1:exon:8330;Parent=Msa1382710-mRNA-1
tig0020524 five_prime_UTR 13133 13309 13133 ID=Msa1382710-mRNA-1:five_prime_utr;Parent=Msa1382710-mRNA-1
tig0020524 CDS 12732 13132 12732 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 9808 11074 9808 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 9108 9231 9108 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 8902 8999 8902 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 8426 8491 8426 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 8031 8120 8031 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 7302 7478 7302 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
tig0020524 CDS 7075 7098 7075 ID=Msa1382710-mRNA-1:cds;Parent=Msa1382710-mRNA-1
Gene Sequence

>Msa1382710

ATGAACGATTTCGACCGTTTATTAGCTACTGAATTCGGTTTGAAACCTCAAGGCAAATCTGCACCAATGTCATCATCATCATCCAAAGGATCTTCCAATTTCACCAAAACTTCCTCTCTCAACTTCGATTCACATTCCCGATCCTTTCACTCTTCCAATCATGATTCCGATCTCTTCAATTCTAATCCCATCTCTCGTAGCACCTCCGGTTTCGATTCCATGTCCGTCAACTCGCCTGTTTATGATAAACCTCTTTACGACGACGATGACGGAAGTGCCGTTGCGTTTGATGATCTTCTCGGCGGATTCGGTCATTCGAAGAAAACGGTGAAGAATGAGAGAGGTGTCGGTGATTTTGATGATTTGATCAATGGATTTGGGAACAAGTCCTCCCGTCAAAGGCCCACTCCTGATATTGGTTCATCATCAGAATCTACTTTCAGTGCATCTAAAACAACCTCCAATGCAACAGAAGACCCTTTTAAAATATTTGAATCAGCTTCCGCTCCAACTGATTCATCCTCAGGCCACTTTTCAGACCCATTAGAAGAGATTAGTAAATTTACTAGTTCTAAAAGCACAAAAAATGATAGTTCATCAAATTCTAATGGTGCAGTATATGATGATACTGATCCTTTTGATGGACTTGGAAATTCAGTACCAGCATTTTCATCAGAGAGGACTAGCAGATATGGCACCGATTCCCCAACACCGTGGTCAAACACAAGTTCAGGTTGGACCAGAGATAAAGAATCAATTGAAAAATTGTCTGTGAGGAGTCCTGATAGACGAACACATAACAAGATTCCTGTTGAACATGATCAGGAGTTTCATCAAGCGCCATATGGCATGCCTAAATATTCATCTGATTCTAATAAACCAGTAGCTGGCCAAATGCCTACTTCCCCTTCTTATTTTAATGATGGTTTTAGACCCGTCAATTCTCGGGCAGATATGTCTCCAAAATATGAAGAAAAGTTGGCCTCAGATCATGACGATATATGGCTAACGGTATCAGAGATTCCTCTTTTTACACAACCAACTTCTGCTCCACCACCTTCAAGACCACCTCCTCCTCGACCAGTACATATTCCCAAGTCAGAGGAGAGAAGCAGTTCAAACCATGAGCAGCAGCAAAAGGAGATGGAGGATAGAGAGCAAAGAAGAATTGAAAGGGAAAGGAAGGAGAAAGAAAGAGAACAACAGAGACTTGAGAGGGAAAGAGAAAATGAAAGACAGGCTGTGGAAAGAGCTACTAGAGAAGCACGTGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAAGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGTGCGTGCTGAAAGGGCCGCTGTTCAGAGGGCACAAGCTGAAGCCCGTGAAAGGGCTGCTGCTGAGGCAAAGAAAAGGGCTGAAAAGGCTGCTGCAGGGGAAAAGGTGAGAGAAGCACGAGAAAGAGCTGCAGCTGCAAGGACTGAAGCTGAAGCACGAGTTAAAGCAGAACGTGCTGCTGTGGAAAGGGCTGCTGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGAATGTACCAGCAAAAAAATGAAAATGATCTTGAATCGTTCTTCAGCGTGAGGGGACGGGCCAATAGCGCTCCAAGGCCTCCTAGGTCTAACTCTTCTGATTCAGTTTTTGATGCACAATTTCAGCCAGAGGTAAACCAGAAACCTACAACTGTGTCTTCAAACATAAAGAGGGCACCATCATCACCTAATATTGTTGATGATCTTTCCTCAATTTTTGGAGCATCTCCCTCAGCTGGAGAATTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGGCGAAAAGCCAGATTGGAACGCCTTCAGAGGGCTCAGGAGCGCGCGGCAAAGGCATTGGCTGAGAAGAATCAACGGGACCTACAGACTCAAAGAGAGCAGAATGAGAGACATAGGCTTGCGGAAACACTGGACTTTGAAGTTAAGCGCTGGGCTGCAGGGAAAGAGGGGAACTTGCGTGCTCTACTCTCCACCTTACAATATGTATTATGGCCTGAATGTGGTTGGCAGGCAGTTTCTTTGACTGATCTTATTACAGCCGCTACTGTTAAAAAGGCTTATAGAAAAGCTACACTGTGCATTCATCCTGATAAAGTGCAGCAGAAGGGTGCCACTCTTCAGCAGAAATATATTGCAGAAAAGGTTTTCGATCTACTAAAGGACGTTCTGCCTCTGCAGATTTAG
Protein sequence

>Msa1382710

MNDFDRLLATEFGLKPQGKSAPMSSSSSKGSSNFTKTSSLNFDSHSRSFHSSNHDSDLFNSNPISRSTSGFDSMSVNSPVYDKPLYDDDDGSAVAFDDLLGGFGHSKKTVKNERGVGDFDDLINGFGNKSSRQRPTPDIGSSSESTFSASKTTSNATEDPFKIFESASAPTDSSSGHFSDPLEEISKFTSSKSTKNDSSSNSNGAVYDDTDPFDGLGNSVPAFSSERTSRYGTDSPTPWSNTSSGWTRDKESIEKLSVRSPDRRTHNKIPVEHDQEFHQAPYGMPKYSSDSNKPVAGQMPTSPSYFNDGFRPVNSRADMSPKYEEKLASDHDDIWLTVSEIPLFTQPTSAPPPSRPPPPRPVHIPKSEERSSSNHEQQQKEMEDREQRRIERERKEKEREQQRLERERENERQAVERATREARERAAAEARQRAEKAAVEKANAEARVRAERAAVQRAQAEARERAAAEAKKRAEKAAAGEKVREARERAAAARTEAEARVKAERAAVERAAAEARERAAAAARMYQQKNENDLESFFSVRGRANSAPRPPRSNSSDSVFDAQFQPEVNQKPTTVSSNIKRAPSSPNIVDDLSSIFGASPSAGEFQEVEGESEERRKARLERLQRAQERAAKALAEKNQRDLQTQREQNERHRLAETLDFEVKRWAAGKEGNLRALLSTLQYVLWPECGWQAVSLTDLITAATVKKAYRKATLCIHPDKVQQKGATLQQKYIAEKVFDLLKDVLPLQI*