AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003766

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003766.t1 MTR_4g069850 100.000 206 0 0 1 206 1 206 7.05e-155 427
MS.gene003766.t1 MTR_4g012940 88.406 207 23 1 1 206 1 207 8.37e-137 381
MS.gene003766.t1 MTR_2g101890 85.854 205 28 1 3 206 5 209 3.18e-132 370
MS.gene003766.t1 MTR_1g097420 71.770 209 54 2 1 206 1 207 2.13e-107 307
MS.gene003766.t1 MTR_1g097420 63.559 236 54 3 1 206 1 234 2.36e-101 293
MS.gene003766.t1 MTR_8g092020 66.010 203 68 1 4 206 8 209 2.24e-99 286
MS.gene003766.t1 MTR_6g039490 59.223 206 83 1 1 206 1 205 3.62e-84 249
MS.gene003766.t1 MTR_1452s0010 84.337 83 13 0 28 110 1 83 4.43e-48 153
MS.gene003766.t1 MTR_4g064897 38.462 208 110 5 8 204 12 212 3.79e-43 144
MS.gene003766.t1 MTR_2g005510 38.117 223 107 7 1 199 1 216 6.09e-42 141
MS.gene003766.t1 MTR_1g068740 39.901 203 108 7 2 199 5 198 2.67e-41 139
MS.gene003766.t1 MTR_5g013900 38.756 209 104 6 10 206 11 207 5.49e-41 138
MS.gene003766.t1 MTR_1g068730 39.409 203 109 7 2 199 5 198 1.04e-40 138
MS.gene003766.t1 MTR_2g005500 41.071 168 92 3 8 175 9 169 2.51e-40 136
MS.gene003766.t1 MTR_2g014990 37.619 210 110 7 8 204 13 214 4.21e-40 136
MS.gene003766.t1 MTR_7g100020 40.415 193 105 6 8 199 15 198 4.28e-40 136
MS.gene003766.t1 MTR_2g096550 42.262 168 92 4 8 175 15 177 7.21e-40 135
MS.gene003766.t1 MTR_1g115325 40.206 194 100 6 8 201 15 192 9.76e-40 135
MS.gene003766.t1 MTR_4g098950 37.981 208 106 6 10 206 11 206 1.20e-39 135
MS.gene003766.t1 MTR_4g088090 36.190 210 113 7 8 204 13 214 7.67e-39 133
MS.gene003766.t1 MTR_3g069510 39.881 168 94 3 8 175 12 172 1.91e-38 132
MS.gene003766.t1 MTR_8g090215 39.024 205 109 6 10 206 11 207 2.18e-38 132
MS.gene003766.t1 MTR_7g081700 37.500 200 114 5 8 204 8 199 3.36e-38 131
MS.gene003766.t1 MTR_3g087160 38.235 204 111 4 10 206 11 206 5.13e-38 130
MS.gene003766.t1 MTR_8g006970 38.000 200 114 5 8 204 22 214 8.04e-38 130
MS.gene003766.t1 MTR_1686s0010 68.750 80 25 0 28 107 1 80 1.18e-37 126
MS.gene003766.t1 MTR_4g079350 35.238 210 115 7 8 204 13 214 1.67e-37 130
MS.gene003766.t1 MTR_1g052475 38.503 187 108 3 8 194 15 194 2.74e-36 127
MS.gene003766.t1 MTR_8g006970 40.964 166 91 4 8 173 8 166 4.66e-36 125
MS.gene003766.t1 MTR_4g063160 38.693 199 110 7 8 203 15 204 5.68e-36 125
MS.gene003766.t1 MTR_6g021790 39.766 171 96 3 8 178 6 169 5.98e-36 125
MS.gene003766.t1 MTR_8g036220 41.358 162 88 4 8 169 16 170 9.07e-36 125
MS.gene003766.t1 MTR_8g103550 39.412 170 96 3 10 179 11 173 2.26e-35 124
MS.gene003766.t1 MTR_2g075950 34.450 209 118 7 8 204 13 214 3.83e-35 124
MS.gene003766.t1 MTR_3g086980 35.714 196 117 4 8 203 16 202 8.22e-35 123
MS.gene003766.t1 MTR_7g405790 36.310 168 100 3 8 175 15 175 1.11e-34 122
MS.gene003766.t1 MTR_2g090865 34.928 209 116 7 8 204 11 211 1.90e-34 122
MS.gene003766.t1 MTR_0262s0050 40.606 165 91 3 8 172 15 172 2.38e-34 122
MS.gene003766.t1 MTR_2g027660 36.683 199 116 4 8 203 6 197 2.81e-34 121
MS.gene003766.t1 MTR_3g064390 38.788 165 94 3 10 174 12 169 4.28e-34 120
MS.gene003766.t1 MTR_5g076590 38.182 165 95 3 10 174 12 169 1.89e-33 119
MS.gene003766.t1 MTR_8g031680 38.824 170 97 3 9 178 7 169 2.40e-33 119
MS.gene003766.t1 MTR_8g089985 36.364 165 98 3 8 172 17 174 2.47e-33 119
MS.gene003766.t1 MTR_1g078200 36.310 168 100 3 8 175 14 174 4.53e-33 118
MS.gene003766.t1 MTR_2g083860 36.970 165 97 2 8 172 13 170 5.67e-33 118
MS.gene003766.t1 MTR_8g027220 33.937 221 124 6 1 206 19 232 1.08e-32 117
MS.gene003766.t1 MTR_7g051940 35.119 168 102 3 8 175 13 173 1.31e-32 117
MS.gene003766.t1 MTR_6g079550 37.654 162 94 3 8 169 12 166 2.44e-32 116
MS.gene003766.t1 MTR_1663s0010 65.333 75 26 0 110 184 1 75 8.96e-32 110
MS.gene003766.t1 MTR_8g031870 35.882 170 102 3 5 174 3 165 1.11e-31 114
MS.gene003766.t1 MTR_8g031660 35.176 199 114 4 8 206 6 189 3.53e-31 113
MS.gene003766.t1 MTR_8g107070 37.654 162 94 3 8 169 14 168 1.06e-30 113
MS.gene003766.t1 MTR_1g068730 41.353 133 70 3 2 130 5 133 1.63e-30 110
MS.gene003766.t1 MTR_1g068740 41.353 133 70 3 2 130 5 133 3.76e-30 110
MS.gene003766.t1 MTR_8g093740 36.416 173 102 5 8 179 13 178 4.05e-30 110
MS.gene003766.t1 MTR_1g094220 35.928 167 99 4 9 174 32 191 6.41e-30 109
MS.gene003766.t1 MTR_7g117910 38.514 148 83 3 8 155 20 159 1.21e-29 109
MS.gene003766.t1 MTR_4g099470 40.559 143 78 3 33 175 9 144 1.41e-29 108
MS.gene003766.t1 MTR_1g029450 36.416 173 102 5 8 179 17 182 5.86e-29 107
MS.gene003766.t1 MTR_1g094220 35.152 165 99 4 9 172 32 189 1.86e-28 106
MS.gene003766.t1 MTR_8g031830 35.976 164 98 3 5 168 3 159 5.89e-28 104
MS.gene003766.t1 MTR_1g094220 34.756 164 99 4 9 171 32 188 1.72e-27 104
MS.gene003766.t1 MTR_1g094220 34.756 164 99 4 9 171 32 188 1.75e-27 103
MS.gene003766.t1 MTR_1g090717 35.567 194 114 6 9 200 16 200 2.25e-27 103
MS.gene003766.t1 MTR_7g103070 36.970 165 97 5 10 173 18 176 3.46e-27 103
MS.gene003766.t1 MTR_2g102060 34.104 173 107 4 2 174 4 169 5.46e-27 102
MS.gene003766.t1 MTR_3g096350 34.682 173 105 5 2 173 6 171 9.48e-27 102
MS.gene003766.t1 MTR_3g064390 39.669 121 69 1 10 130 12 128 1.32e-26 100
MS.gene003766.t1 MTR_1g062760 32.642 193 114 6 9 200 15 192 3.15e-26 100
MS.gene003766.t1 MTR_1812s0010 58.209 67 28 0 111 177 2 68 6.00e-24 90.9
MS.gene003766.t1 MTR_3g107713 31.214 173 95 6 9 174 14 169 1.43e-22 91.3
MS.gene003766.t1 MTR_3g107707 31.214 173 95 6 9 174 14 169 1.48e-22 91.3
MS.gene003766.t1 MTR_3g107717 31.214 173 95 6 9 174 14 169 1.55e-22 91.3
MS.gene003766.t1 MTR_3g096350 37.500 128 75 3 2 128 6 129 2.34e-22 89.0
MS.gene003766.t1 MTR_3g096350 37.500 128 75 3 2 128 6 129 4.46e-22 88.2
MS.gene003766.t1 MTR_8g093740 35.915 142 84 4 39 179 10 145 7.63e-22 88.2
MS.gene003766.t1 MTR_6g087980 29.612 206 122 5 8 204 6 197 3.03e-20 84.7
MS.gene003766.t1 MTR_5g036990 51.087 92 40 3 39 129 32 119 8.50e-19 78.6
MS.gene003766.t1 MTR_4g088055 30.168 179 110 4 8 177 6 178 5.28e-18 78.6
MS.gene003766.t1 MTR_2g093510 61.194 67 26 0 119 185 761 827 8.53e-18 81.3
MS.gene003766.t1 MTR_2g090875 29.050 179 112 4 8 177 6 178 5.23e-17 75.9
MS.gene003766.t1 MTR_7g103070 33.103 145 82 5 57 200 9 139 7.04e-17 74.7
MS.gene003766.t1 MTR_4g113620 27.711 166 101 5 9 174 14 160 1.10e-16 75.5
MS.gene003766.t1 MTR_5g022600 29.050 179 112 5 8 177 6 178 1.49e-16 74.7
MS.gene003766.t1 MTR_8g075240 29.609 179 111 5 8 177 6 178 2.84e-16 73.9
MS.gene003766.t1 MTR_4g073250 26.882 186 121 4 8 184 6 185 3.92e-16 73.6
MS.gene003766.t1 MTR_3g078260 28.497 193 123 4 1 184 1 187 4.09e-16 73.9
MS.gene003766.t1 MTR_3g078260 33.594 128 78 3 1 127 1 122 4.71e-14 67.0
MS.gene003766.t1 MTR_8g091980 25.532 188 106 5 9 169 22 202 2.72e-11 62.0
MS.gene003766.t1 MTR_8g091980 26.286 175 100 4 9 156 22 194 2.85e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003766.t1 AT3G18820 93.204 206 14 0 1 206 1 206 1.67e-145 403
MS.gene003766.t1 AT1G49300 89.320 206 22 0 1 206 1 206 1.49e-139 388
MS.gene003766.t1 AT1G49300 89.320 206 22 0 1 206 1 206 1.49e-139 388
MS.gene003766.t1 AT1G52280 83.981 206 33 0 1 206 1 206 1.42e-130 365
MS.gene003766.t1 AT3G16100 82.524 206 36 0 1 206 1 206 4.12e-130 364
MS.gene003766.t1 AT4G09720 70.874 206 60 0 1 206 1 206 4.10e-111 316
MS.gene003766.t1 AT4G09720 69.194 211 60 1 1 206 1 211 1.13e-107 308
MS.gene003766.t1 AT4G09720 67.281 217 60 1 1 206 1 217 1.89e-107 307
MS.gene003766.t1 AT1G22740 71.014 207 55 2 1 206 1 203 4.14e-106 303
MS.gene003766.t1 AT2G21880 64.762 210 65 2 4 206 5 212 1.09e-97 283
MS.gene003766.t1 AT2G21880 60.952 210 65 3 4 206 5 204 5.38e-88 258
MS.gene003766.t1 AT4G09720 67.836 171 55 0 36 206 2 172 6.85e-87 254
MS.gene003766.t1 AT4G09720 67.836 171 55 0 36 206 2 172 6.85e-87 254
MS.gene003766.t1 AT4G09720 67.836 171 55 0 36 206 2 172 6.85e-87 254
MS.gene003766.t1 AT2G21880 62.434 189 62 2 25 206 1 187 1.82e-83 246
MS.gene003766.t1 AT2G21880 62.434 189 62 2 25 206 1 187 1.82e-83 246
MS.gene003766.t1 AT5G39620 58.721 172 71 0 6 177 3 174 1.44e-72 219
MS.gene003766.t1 AT5G59840 39.594 197 112 5 8 203 15 205 1.13e-41 140
MS.gene003766.t1 AT3G53610 40.104 192 108 5 8 198 15 200 7.07e-41 138
MS.gene003766.t1 AT3G53610 40.104 192 108 5 8 198 15 200 7.07e-41 138
MS.gene003766.t1 AT3G53610 40.104 192 108 5 8 198 15 200 7.07e-41 138
MS.gene003766.t1 AT1G09630 40.936 171 94 3 8 178 12 175 7.67e-41 138
MS.gene003766.t1 AT1G28550 36.190 210 114 6 8 204 13 215 1.23e-40 138
MS.gene003766.t1 AT2G33870 36.190 210 114 6 8 204 13 215 1.48e-40 137
MS.gene003766.t1 AT3G46060 38.579 197 114 5 8 203 15 205 2.29e-40 137
MS.gene003766.t1 AT3G46060 38.579 197 114 5 8 203 15 205 2.29e-40 137
MS.gene003766.t1 AT3G46060 38.579 197 114 5 8 203 15 205 2.29e-40 137
MS.gene003766.t1 AT2G44610 38.571 210 104 6 10 206 11 208 4.97e-40 136
MS.gene003766.t1 AT4G18430 35.238 210 115 7 8 204 13 214 2.32e-39 134
MS.gene003766.t1 AT3G11730 41.011 178 98 3 1 178 1 171 5.60e-39 133
MS.gene003766.t1 AT5G60860 36.667 210 112 7 8 204 13 214 1.09e-38 133
MS.gene003766.t1 AT3G15060 36.190 210 113 7 8 204 13 214 1.47e-38 132
MS.gene003766.t1 AT5G59150 39.394 165 93 3 8 172 12 169 2.14e-38 132
MS.gene003766.t1 AT5G45750 36.364 209 113 8 8 204 13 213 2.22e-38 132
MS.gene003766.t1 AT4G17530 37.186 199 116 4 8 204 8 199 3.03e-38 131
MS.gene003766.t1 AT1G07410 35.577 208 115 6 8 204 12 211 3.21e-38 131
MS.gene003766.t1 AT3G12160 39.474 190 108 3 8 197 15 197 3.89e-38 131
MS.gene003766.t1 AT3G46830 40.000 165 92 3 8 172 12 169 5.96e-38 131
MS.gene003766.t1 AT3G46830 40.000 165 92 3 8 172 12 169 5.96e-38 131
MS.gene003766.t1 AT5G47200 37.186 199 116 4 8 204 8 199 6.10e-38 130
MS.gene003766.t1 AT5G03520 42.697 178 92 5 2 175 5 176 1.71e-37 130
MS.gene003766.t1 AT5G64990 39.234 209 104 6 10 206 9 206 2.71e-37 129
MS.gene003766.t1 AT3G09900 42.697 178 92 5 2 175 5 176 8.04e-37 128
MS.gene003766.t1 AT4G35860 39.766 171 96 3 8 178 6 169 2.13e-36 127
MS.gene003766.t1 AT1G02130 36.000 200 118 5 8 204 8 200 2.95e-36 126
MS.gene003766.t1 AT4G18800 36.957 184 99 4 8 182 13 188 3.87e-36 126
MS.gene003766.t1 AT5G10260 37.019 208 109 6 10 206 11 207 9.43e-36 125
MS.gene003766.t1 AT1G05810 33.645 214 124 5 4 206 8 214 1.22e-35 125
MS.gene003766.t1 AT1G05810 33.645 214 124 5 4 206 54 260 3.10e-35 125
MS.gene003766.t1 AT5G47960 34.906 212 116 5 8 204 15 219 3.32e-35 124
MS.gene003766.t1 AT1G16920 34.135 208 119 7 8 204 13 213 4.74e-35 123
MS.gene003766.t1 AT2G31680 35.714 168 101 3 8 175 12 172 1.29e-34 122
MS.gene003766.t1 AT4G17170 36.683 199 116 4 8 203 6 197 1.36e-34 122
MS.gene003766.t1 AT4G39990 35.052 194 114 4 8 201 17 198 1.44e-34 122
MS.gene003766.t1 AT5G64990 37.963 216 104 7 10 206 9 213 1.49e-34 122
MS.gene003766.t1 AT1G06400 37.576 165 96 3 8 172 13 170 1.96e-34 122
MS.gene003766.t1 AT1G73640 39.506 162 91 3 8 169 13 167 3.26e-34 122
MS.gene003766.t1 AT5G65270 35.676 185 104 4 8 184 17 194 3.38e-34 121
MS.gene003766.t1 AT4G17160 38.824 170 97 3 9 178 7 169 5.88e-34 120
MS.gene003766.t1 AT4G39890 38.182 165 96 2 9 173 10 168 1.61e-33 119
MS.gene003766.t1 AT1G18200 39.394 165 93 4 8 172 13 170 2.03e-33 119
MS.gene003766.t1 AT1G01200 37.278 169 100 2 1 169 21 183 2.15e-33 120
MS.gene003766.t1 AT2G22290 35.294 204 116 4 10 206 11 205 5.98e-33 117
MS.gene003766.t1 AT2G43130 35.714 168 101 3 8 175 12 172 6.16e-33 118
MS.gene003766.t1 AT4G19640 36.066 183 107 4 10 189 12 187 1.02e-32 117
MS.gene003766.t1 AT5G45130 37.576 165 96 3 10 174 12 169 1.19e-32 117
MS.gene003766.t1 AT5G47520 35.714 168 101 3 8 175 14 174 6.14e-32 115
MS.gene003766.t1 AT3G07410 34.524 168 103 3 8 175 12 172 7.03e-32 115
MS.gene003766.t1 AT5G45130 37.423 163 95 3 12 174 22 177 2.00e-31 114
MS.gene003766.t1 AT3G54840 34.659 176 106 5 1 174 25 193 2.02e-29 108
MS.gene003766.t1 AT1G43890 36.416 173 102 5 8 179 13 178 3.76e-29 108
MS.gene003766.t1 AT1G43890 36.416 173 102 5 8 179 13 178 3.76e-29 108
MS.gene003766.t1 AT1G43890 36.416 173 102 5 8 179 13 178 3.76e-29 108
MS.gene003766.t1 AT3G54840 35.152 165 99 4 11 174 2 159 9.27e-29 105
MS.gene003766.t1 AT3G54840 34.302 172 104 5 1 170 25 189 3.03e-28 105
MS.gene003766.t1 AT5G03520 44.697 132 67 4 44 175 41 166 3.41e-28 105
MS.gene003766.t1 AT5G03530 34.896 192 109 7 10 200 15 191 2.48e-27 103
MS.gene003766.t1 AT5G03530 34.896 192 109 7 10 200 15 191 2.48e-27 103
MS.gene003766.t1 AT4G19640 37.226 137 81 2 10 146 12 143 3.51e-27 101
MS.gene003766.t1 AT4G19640 39.167 120 69 1 10 129 12 127 5.26e-26 99.8
MS.gene003766.t1 AT5G59150 39.024 123 68 3 50 172 3 118 9.51e-24 93.2
MS.gene003766.t1 AT4G35860 40.476 126 67 4 50 174 2 120 5.21e-23 90.9
MS.gene003766.t1 AT5G55190 31.214 173 95 6 9 174 14 169 1.65e-22 91.3
MS.gene003766.t1 AT5G20010 31.214 173 95 6 9 174 14 169 1.73e-22 91.3
MS.gene003766.t1 AT5G20020 31.214 173 95 6 9 174 14 169 1.89e-22 90.9
MS.gene003766.t1 AT3G09910 31.606 193 116 6 9 200 14 191 1.50e-21 88.2
MS.gene003766.t1 AT3G09910 31.606 193 116 6 9 200 14 191 1.50e-21 88.2
MS.gene003766.t1 AT3G09910 31.606 193 116 6 9 200 14 191 1.50e-21 88.2
MS.gene003766.t1 AT5G55080 29.101 189 120 4 9 193 14 192 1.63e-21 88.6
MS.gene003766.t1 AT4G28950 31.351 185 114 5 8 185 6 184 6.70e-21 86.7
MS.gene003766.t1 AT3G09910 34.337 166 101 5 9 173 14 172 6.76e-21 86.3
MS.gene003766.t1 AT3G09910 34.337 166 101 5 9 173 14 172 6.76e-21 86.3
MS.gene003766.t1 AT5G45970 28.889 180 113 4 8 178 6 179 1.27e-17 77.8
MS.gene003766.t1 AT5G62880 29.947 187 116 4 1 178 1 181 2.29e-17 77.4
MS.gene003766.t1 AT3G48040 29.947 187 116 4 1 178 1 181 2.12e-16 74.7
MS.gene003766.t1 AT4G35020 28.889 180 113 4 8 178 6 179 4.36e-16 73.6
MS.gene003766.t1 AT4G35020 28.889 180 113 4 8 178 6 179 4.36e-16 73.6
MS.gene003766.t1 AT4G35020 28.889 180 113 4 8 178 6 179 4.36e-16 73.6
MS.gene003766.t1 AT1G20090 28.495 186 115 5 1 177 1 177 1.10e-15 72.4
MS.gene003766.t1 AT2G44690 27.778 180 115 4 8 178 18 191 1.65e-15 72.4
MS.gene003766.t1 AT5G09910 27.168 173 97 4 9 154 23 193 2.18e-15 73.6
MS.gene003766.t1 AT5G09910 27.168 173 97 4 9 154 23 193 2.18e-15 73.6
MS.gene003766.t1 AT1G75840 27.933 179 114 4 8 177 6 178 2.39e-15 71.6
MS.gene003766.t1 AT5G62880 34.615 130 78 4 1 129 1 124 2.63e-15 71.2
MS.gene003766.t1 AT3G51300 28.492 179 113 4 8 177 6 178 3.39e-15 71.2
MS.gene003766.t1 AT2G17800 28.492 179 113 4 8 177 6 178 5.28e-15 70.9
MS.gene003766.t1 AT2G17800 28.492 179 113 4 8 177 6 178 5.28e-15 70.9
MS.gene003766.t1 AT3G48040 34.615 130 78 4 1 129 1 124 6.35e-15 70.1
MS.gene003766.t1 AT4G35950 28.492 179 113 4 8 177 6 178 7.98e-15 70.1
MS.gene003766.t1 AT5G64813 27.513 189 102 7 9 169 23 204 3.03e-14 70.5
MS.gene003766.t1 AT5G64813 27.513 189 102 7 9 169 23 204 3.03e-14 70.5
MS.gene003766.t1 AT5G64813 27.513 189 102 7 9 169 23 204 3.03e-14 70.5
MS.gene003766.t1 AT4G35020 31.405 121 76 3 8 127 6 120 1.96e-12 62.8
MS.gene003766.t1 AT4G35020 31.405 121 76 3 8 127 6 120 1.96e-12 62.8

Find 56 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGCAGATGTCTCAAAATA+TGG 0.180049 4.1:-32834076 None:intergenic
ATCTTCAAATTGCACTTCTT+TGG 0.266812 4.1:-32832508 None:intergenic
TTCGACATTAATACCTTCTT+TGG 0.296445 4.1:-32834095 None:intergenic
GGGCATCCTTTGCTATGGTT+TGG 0.331267 4.1:-32834126 None:intergenic
AAGAAGTGCAATTTGAAGAT+AGG 0.335741 4.1:+32832511 MS.gene003766:CDS
ATTCCTCCCTCCAGTTGTTA+AGG 0.391109 4.1:-32833628 None:intergenic
CATTTGACAACCTTAACAAC+TGG 0.410397 4.1:+32833618 MS.gene003766:CDS
AGAAAGCAACTCCTAGGCTT+TGG 0.417205 4.1:-32833544 None:intergenic
AGCAATCAGCCAAGGTCATC+AGG 0.423555 4.1:+32834679 MS.gene003766:CDS
CTCTTGAAAGTCATCATTCT+CGG 0.427482 4.1:+32831412 MS.gene003766:CDS
CTTTCAAGAGCGTTCTTCTA+CGG 0.436158 4.1:-32831399 None:intergenic
GCAAAGGATGCCCTGAAAAG+TGG 0.450910 4.1:+32834136 MS.gene003766:CDS
TTGTTTCCTATAACAACAAA+AGG 0.451159 4.1:-32833838 None:intergenic
ACAACAAAAGGAAAATTCTC+TGG 0.451708 4.1:-32833826 None:intergenic
TTTCCAACATCAATTGTGTC+TGG 0.462911 4.1:-32834655 None:intergenic
TGCACAGGTTTCAGAAAAGA+AGG 0.467310 4.1:+32834021 MS.gene003766:intron
TTTCAGGGCATCCTTTGCTA+TGG 0.470505 4.1:-32834131 None:intergenic
CTAGGCTTTGGAATCTCTCC+TGG 0.472910 4.1:-32833532 None:intergenic
TAGGAGTTGCTTTCTATCGT+GGG 0.475937 4.1:+32833552 MS.gene003766:CDS
TGGCAGATGTCTCAAAATAT+GGG 0.483704 4.1:-32834075 None:intergenic
TTTGAGACATCTGCCAAAGA+AGG 0.487428 4.1:+32834082 MS.gene003766:CDS
TTTCAAGAGCGTTCTTCTAC+GGG 0.490904 4.1:-32831398 None:intergenic
GGAAAATTCTCTGGATCGGA+AGG 0.495526 4.1:-32833817 None:intergenic
CGGGCATGGTGTGCAGCAAA+AGG 0.496942 4.1:+32834046 MS.gene003766:CDS
CAACATCAATTGTGTCTGGC+AGG 0.497094 4.1:-32834651 None:intergenic
TGCCCTGAAAAGTGGGGAAG+AGG 0.506394 4.1:+32834144 MS.gene003766:CDS
GGAAACAAGATCGACATTGA+TGG 0.507185 4.1:+32833853 MS.gene003766:CDS
GATTTGGGATACAGCTGGCC+AGG 0.507917 4.1:+32833514 MS.gene003766:intron
GGTTAAGAAGTCAGCTCCAA+TGG 0.508254 4.1:-32832487 None:intergenic
TCATCATTCTCGGCGACAGC+GGG 0.509207 4.1:+32831422 MS.gene003766:CDS
CTAGGAGTTGCTTTCTATCG+TGG 0.516699 4.1:+32833551 MS.gene003766:CDS
AATCAGTACAAGGCAACCAT+TGG 0.525698 4.1:+32832471 MS.gene003766:CDS
GCACCATTCACAAACCTGTA+AGG 0.531833 4.1:-32832541 None:intergenic
TTGCAGATTTGGGATACAGC+TGG 0.533863 4.1:+32833509 MS.gene003766:intron
CAAAGGATGCCCTGAAAAGT+GGG 0.534379 4.1:+32834137 MS.gene003766:CDS
AGGTTTCAGAAAAGAAGGCT+CGG 0.540140 4.1:+32834026 MS.gene003766:intron
AAAAGGAAAATTCTCTGGAT+CGG 0.543661 4.1:-32833821 None:intergenic
CTGCCAGACACAATTGATGT+TGG 0.557538 4.1:+32834652 MS.gene003766:CDS
GGTTTCAGAAAAGAAGGCTC+GGG 0.559631 4.1:+32834027 MS.gene003766:intron
CACTCACATCCTGATGACCT+TGG 0.564551 4.1:-32834688 None:intergenic
CACGATAGAAAGCAACTCCT+AGG 0.569261 4.1:-32833550 None:intergenic
TTGACAACCTTAACAACTGG+AGG 0.575421 4.1:+32833621 MS.gene003766:CDS
CAGGAGAGATTCCAAAGCCT+AGG 0.576665 4.1:+32833533 MS.gene003766:CDS
AACAAGATCGACATTGATGG+TGG 0.578098 4.1:+32833856 MS.gene003766:CDS
AAGAGCGTTCTTCTACGGGA+AGG 0.590281 4.1:-32831394 None:intergenic
AGCATTCCAAACCATAGCAA+AGG 0.595720 4.1:+32834120 MS.gene003766:CDS
CAGAAAAGAAGGCTCGGGCA+TGG 0.609079 4.1:+32834032 MS.gene003766:CDS
GTCATCATTCTCGGCGACAG+CGG 0.612250 4.1:+32831421 MS.gene003766:CDS
AGGAGTTGCTTTCTATCGTG+GGG 0.614079 4.1:+32833553 MS.gene003766:CDS
GAAGTTTAGTAATCAGTACA+AGG 0.614358 4.1:+32832461 MS.gene003766:CDS
TTGGAAACAGCAATCAGCCA+AGG 0.645424 4.1:+32834671 MS.gene003766:CDS
ACAAGATCGACATTGATGGT+GGG 0.651715 4.1:+32833857 MS.gene003766:CDS
TGACAACCTTAACAACTGGA+GGG 0.655521 4.1:+32833622 MS.gene003766:CDS
TGATGGTGGGAACAGTAGAG+TGG 0.665695 4.1:+32833870 MS.gene003766:CDS
CAACCTTAACAACTGGAGGG+AGG 0.688480 4.1:+32833625 MS.gene003766:CDS
AAAGGATGCCCTGAAAAGTG+GGG 0.713593 4.1:+32834138 MS.gene003766:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATGATAATTATGATTAT+CGG - chr4.1:32831481-32831500 None:intergenic 10.0%
!! ACTTAATTTAAAAAATTGTT+TGG + chr4.1:32831951-32831970 MS.gene003766:intron 10.0%
!!! TATTGAAATTTAAGTTAATA+TGG + chr4.1:32833441-32833460 MS.gene003766:intron 10.0%
!!! TTCACATATCTAAAATATAT+AGG - chr4.1:32832438-32832457 None:intergenic 15.0%
!! AAATCAACTTAACATTAACA+TGG - chr4.1:32831987-32832006 None:intergenic 20.0%
!! AAGATAAACATTCCAAAAAA+AGG - chr4.1:32832658-32832677 None:intergenic 20.0%
!! ACATATAGATTGAATCAAAT+GGG + chr4.1:32833161-32833180 MS.gene003766:intron 20.0%
!! AGATAAACATTCCAAAAAAA+GGG - chr4.1:32832657-32832676 None:intergenic 20.0%
!! CAAAAAGATTCATAATCTAT+GGG - chr4.1:32834536-32834555 None:intergenic 20.0%
!! CTATAAGTAACTTAATTTAC+AGG + chr4.1:32831644-32831663 MS.gene003766:intron 20.0%
!! CTTCATAAAAAATGCATTAA+GGG + chr4.1:32834216-32834235 MS.gene003766:intron 20.0%
!!! AATTTTCCTTTTGTTGTTAT+AGG + chr4.1:32833832-32833851 MS.gene003766:CDS 20.0%
!!! ATCTTTTTGCTATTTGATAA+TGG + chr4.1:32834547-32834566 MS.gene003766:intron 20.0%
!!! TCTTTTTGCTATTTGATAAT+GGG + chr4.1:32834548-32834567 MS.gene003766:intron 20.0%
! AAACATAACATCAGTAACAT+TGG - chr4.1:32834588-32834607 None:intergenic 25.0%
! AAACATGTTAGATAGCAAAA+GGG - chr4.1:32833908-32833927 None:intergenic 25.0%
! AACAATTTCTCAAAAATGAC+AGG - chr4.1:32833020-32833039 None:intergenic 25.0%
! ATAGGATTGATGTTTAATGA+TGG + chr4.1:32834341-32834360 MS.gene003766:intron 25.0%
! ATTAAACATCAATCCTAACA+TGG - chr4.1:32834387-32834406 None:intergenic 25.0%
! ATTCTAAATCTTGCAGATTT+GGG + chr4.1:32833499-32833518 MS.gene003766:intron 25.0%
! CATATAGATTGAATCAAATG+GGG + chr4.1:32833162-32833181 MS.gene003766:intron 25.0%
! GAAGAATAAAAATAAGCAGA+AGG - chr4.1:32831529-32831548 None:intergenic 25.0%
! GACATATAGATTGAATCAAA+TGG + chr4.1:32833160-32833179 MS.gene003766:intron 25.0%
! GATATTACATAGATGGTTTA+TGG + chr4.1:32832681-32832700 MS.gene003766:intron 25.0%
! GATTTAATTGAAGAATTCGT+AGG + chr4.1:32832793-32832812 MS.gene003766:intron 25.0%
! GCAAAAAGATTCATAATCTA+TGG - chr4.1:32834537-32834556 None:intergenic 25.0%
! GCTTCATAAAAAATGCATTA+AGG + chr4.1:32834215-32834234 MS.gene003766:intron 25.0%
! TAATGCAAAGATTGATATGT+TGG + chr4.1:32834440-32834459 MS.gene003766:intron 25.0%
! TACAAAATACTGTGAAATAG+CGG + chr4.1:32832234-32832253 MS.gene003766:intron 25.0%
! TCAAAATCAAATTATGCACA+AGG - chr4.1:32832569-32832588 None:intergenic 25.0%
! TCAATCTTTGCATTATAACA+TGG - chr4.1:32834435-32834454 None:intergenic 25.0%
! TCTTTCTGATATTACATAGA+TGG + chr4.1:32832674-32832693 MS.gene003766:intron 25.0%
! TTAGGATTGATGTTTAATGA+TGG + chr4.1:32834389-32834408 MS.gene003766:intron 25.0%
! TTCCAAAAAATGCAAACTTT+AGG - chr4.1:32832955-32832974 None:intergenic 25.0%
! TTGTTTCCTATAACAACAAA+AGG - chr4.1:32833841-32833860 None:intergenic 25.0%
! TTTGTACTAAATAGCTATTG+AGG - chr4.1:32832220-32832239 None:intergenic 25.0%
!! ATGTTACTGATGTTATGTTT+TGG + chr4.1:32834588-32834607 MS.gene003766:intron 25.0%
!! TGTTACTGATGTTATGTTTT+GGG + chr4.1:32834589-32834608 MS.gene003766:intron 25.0%
!!! AAATTACCAAACCCTTTTTT+TGG + chr4.1:32832643-32832662 MS.gene003766:intron 25.0%
!!! AAGTTTGCATTTTTTGGAAA+CGG + chr4.1:32832956-32832975 MS.gene003766:intron 25.0%
!!! ATCCTAAAGTTTGCATTTTT+TGG + chr4.1:32832950-32832969 MS.gene003766:intron 25.0%
!!! GAATTATTTGTTGTATCTAC+AGG + chr4.1:32832014-32832033 MS.gene003766:intron 25.0%
!!! GGTAATGCTTTAAAAATATG+CGG + chr4.1:32832394-32832413 MS.gene003766:intron 25.0%
!!! TCATTTTTCTTATTCTTGTC+TGG + chr4.1:32831605-32831624 MS.gene003766:intron 25.0%
!!! TGAGGTTTTAGTATTGTATA+GGG + chr4.1:32832373-32832392 MS.gene003766:intron 25.0%
!!! TGTTAGGCTGTTTAATTTTT+TGG + chr4.1:32833285-32833304 MS.gene003766:intron 25.0%
AAAAGGAAAATTCTCTGGAT+CGG - chr4.1:32833824-32833843 None:intergenic 30.0%
AACATTCCAAAAAAAGGGTT+TGG - chr4.1:32832652-32832671 None:intergenic 30.0%
ACAACAAAAGGAAAATTCTC+TGG - chr4.1:32833829-32833848 None:intergenic 30.0%
ACTTAATACAGTAAACTACC+AGG - chr4.1:32832892-32832911 None:intergenic 30.0%
ACTTCCTATACAAAAATCGA+AGG - chr4.1:32832126-32832145 None:intergenic 30.0%
AGTGAACTAAAACAACTAGT+AGG - chr4.1:32834292-32834311 None:intergenic 30.0%
ATCTTCAAATTGCACTTCTT+TGG - chr4.1:32832511-32832530 None:intergenic 30.0%
ATGTTCAACCTTCATTTAAG+AGG - chr4.1:32832825-32832844 None:intergenic 30.0%
CATTCTAAATCTTGCAGATT+TGG + chr4.1:32833498-32833517 MS.gene003766:intron 30.0%
CTGTTTAGCAGTACATATTT+AGG - chr4.1:32833980-32833999 None:intergenic 30.0%
GAAACATGTTAGATAGCAAA+AGG - chr4.1:32833909-32833928 None:intergenic 30.0%
GAAGTTTAGTAATCAGTACA+AGG + chr4.1:32832461-32832480 MS.gene003766:CDS 30.0%
TAACAATCCTTAACCGAAAA+AGG - chr4.1:32833270-32833289 None:intergenic 30.0%
TACATACATGTGCAAACTAA+CGG - chr4.1:32833104-32833123 None:intergenic 30.0%
TAGATAACAAGAGTCATATC+TGG + chr4.1:32831686-32831705 MS.gene003766:intron 30.0%
TATAGAGTAGCTTATTGCAT+AGG + chr4.1:32831879-32831898 MS.gene003766:intron 30.0%
TCTTGGAAACAAATGCATAT+AGG + chr4.1:32834323-32834342 MS.gene003766:intron 30.0%
TTCGACATTAATACCTTCTT+TGG - chr4.1:32834098-32834117 None:intergenic 30.0%
TTGCATTATAACATGGCAAA+TGG - chr4.1:32834428-32834447 None:intergenic 30.0%
TTTCCACAAGAAACAAAACA+TGG - chr4.1:32833376-32833395 None:intergenic 30.0%
! AAGAAGTGCAATTTGAAGAT+AGG + chr4.1:32832511-32832530 MS.gene003766:CDS 30.0%
! ATTTTCACTGCAATTTTCTG+AGG + chr4.1:32832355-32832374 MS.gene003766:intron 30.0%
! GGTTTGGTAATTTGTAAATC+TGG - chr4.1:32832636-32832655 None:intergenic 30.0%
! GTATCCTTCGATTTTTGTAT+AGG + chr4.1:32832119-32832138 MS.gene003766:intron 30.0%
!! CTGAGGTTTTAGTATTGTAT+AGG + chr4.1:32832372-32832391 MS.gene003766:intron 30.0%
!! TATATTTTTGACGATTGCCT+TGG + chr4.1:32833043-32833062 MS.gene003766:intron 30.0%
!! TTGGTTTGTCCATATAATAG+TGG + chr4.1:32834459-32834478 MS.gene003766:intron 30.0%
!! TTTTTCGGTTAAGGATTGTT+AGG + chr4.1:32833269-32833288 MS.gene003766:intron 30.0%
!!! AGTTTGCATTTTTTGGAAAC+GGG + chr4.1:32832957-32832976 MS.gene003766:intron 30.0%
!!! ATTTTTTGGACAGTACACTT+TGG + chr4.1:32833299-32833318 MS.gene003766:intron 30.0%
AACTTTATGATCACTGCATC+AGG + chr4.1:32833789-32833808 MS.gene003766:intron 35.0%
AGGAAGTCAGTATTATGTTC+AGG + chr4.1:32832139-32832158 MS.gene003766:intron 35.0%
AGGTGTTTCATGAATGTATC+TGG - chr4.1:32833960-32833979 None:intergenic 35.0%
ATCAATCCTAACATGGCAAA+TGG - chr4.1:32834380-32834399 None:intergenic 35.0%
CATTTGACAACCTTAACAAC+TGG + chr4.1:32833618-32833637 MS.gene003766:CDS 35.0%
CGAATAGTACTATTGCATAG+CGG + chr4.1:32832171-32832190 MS.gene003766:intron 35.0%
CTCTTGAAAGTCATCATTCT+CGG + chr4.1:32831412-32831431 MS.gene003766:CDS 35.0%
GATTATGAGATGGTGTTCAT+TGG + chr4.1:32834246-32834265 MS.gene003766:intron 35.0%
GGAAGTCAGTATTATGTTCA+GGG + chr4.1:32832140-32832159 MS.gene003766:intron 35.0%
GGGTATATCTGATTATGAGA+TGG + chr4.1:32834236-32834255 MS.gene003766:intron 35.0%
TCTCGAACTCTTCAATTCTA+GGG + chr4.1:32831451-32831470 MS.gene003766:intron 35.0%
TGGCAGATGTCTCAAAATAT+GGG - chr4.1:32834078-32834097 None:intergenic 35.0%
TTCACTATATCCATGTCTCT+TGG + chr4.1:32834306-32834325 MS.gene003766:intron 35.0%
TTGACATGCAAGCTCAAAAT+TGG + chr4.1:32831571-32831590 MS.gene003766:intron 35.0%
TTGGCAGATGTCTCAAAATA+TGG - chr4.1:32834079-32834098 None:intergenic 35.0%
TTTCCAACATCAATTGTGTC+TGG - chr4.1:32834658-32834677 None:intergenic 35.0%
! AAGCCTTTTCCAACTAAATG+GGG - chr4.1:32832730-32832749 None:intergenic 35.0%
! AATCTGGCCTTTCATTTACA+AGG - chr4.1:32832620-32832639 None:intergenic 35.0%
! CAAGCCTTTTCCAACTAAAT+GGG - chr4.1:32832731-32832750 None:intergenic 35.0%
! CTAATACTGAAAGAGCATGA+CGG - chr4.1:32833349-32833368 None:intergenic 35.0%
! GCTATAACACTTTTGCATAG+CGG + chr4.1:32832267-32832286 MS.gene003766:intron 35.0%
!! AAATGCAAACTTTAGGATGC+AGG - chr4.1:32832948-32832967 None:intergenic 35.0%
!! AGTGTTGTTGATGATTTGCA+GGG + chr4.1:32832071-32832090 MS.gene003766:intron 35.0%
!! TAGTGTTGTTGATGATTTGC+AGG + chr4.1:32832070-32832089 MS.gene003766:intron 35.0%
!!! CATCCATGTTTTGTTTCTTG+TGG + chr4.1:32833370-32833389 MS.gene003766:intron 35.0%
!!! CATTTTAAAGTCATGTGCCA+AGG - chr4.1:32833063-32833082 None:intergenic 35.0%
AACAAGATCGACATTGATGG+TGG + chr4.1:32833856-32833875 MS.gene003766:CDS 40.0%
AACAAGCACGAATTTCCACA+TGG - chr4.1:32834624-32834643 None:intergenic 40.0%
AATCAGTACAAGGCAACCAT+TGG + chr4.1:32832471-32832490 MS.gene003766:CDS 40.0%
ACACATAAGTTCTTGTGCAC+AGG + chr4.1:32834006-32834025 MS.gene003766:intron 40.0%
ACATCTTCGGTCAAAAGTCT+CGG + chr4.1:32831844-32831863 MS.gene003766:intron 40.0%
ACATGTGCAAACTAACGGTT+AGG - chr4.1:32833099-32833118 None:intergenic 40.0%
AGCATTCCAAACCATAGCAA+AGG + chr4.1:32834120-32834139 MS.gene003766:CDS 40.0%
AGGTTTCAGAAAAGAAGGCT+CGG + chr4.1:32834026-32834045 MS.gene003766:intron 40.0%
ATACTGTGAAATAGCGGCTA+TGG + chr4.1:32832240-32832259 MS.gene003766:intron 40.0%
CATGAACCATTTGCCATGTT+AGG + chr4.1:32834371-32834390 MS.gene003766:intron 40.0%
CATGTTAGATAGCAAAAGGG+AGG - chr4.1:32833905-32833924 None:intergenic 40.0%
CCATTTAGTTGGAAAAGGCT+TGG + chr4.1:32832729-32832748 MS.gene003766:intron 40.0%
CTCTCGAACTCTTCAATTCT+AGG + chr4.1:32831450-32831469 MS.gene003766:intron 40.0%
CTTTGCACGCCACTATTATA+TGG - chr4.1:32834471-32834490 None:intergenic 40.0%
GCATTTGTTTCCAAGAGACA+TGG - chr4.1:32834319-32834338 None:intergenic 40.0%
GGAAACAAGATCGACATTGA+TGG + chr4.1:32833853-32833872 MS.gene003766:CDS 40.0%
GGTCACAACCTCTTAAATGA+AGG + chr4.1:32832814-32832833 MS.gene003766:intron 40.0%
TCACCTTACAGGTTTGTGAA+TGG + chr4.1:32832538-32832557 MS.gene003766:intron 40.0%
TGACAACCTTAACAACTGGA+GGG + chr4.1:32833622-32833641 MS.gene003766:CDS 40.0%
TGCACAGGTTTCAGAAAAGA+AGG + chr4.1:32834021-32834040 MS.gene003766:intron 40.0%
TTGACAACCTTAACAACTGG+AGG + chr4.1:32833621-32833640 MS.gene003766:CDS 40.0%
TTTGGACAGTACACTTTGGT+GGG + chr4.1:32833303-32833322 MS.gene003766:intron 40.0%
! ACAAGATCGACATTGATGGT+GGG + chr4.1:32833857-32833876 MS.gene003766:CDS 40.0%
! AGATAGGCTTTTCACCTTAC+AGG + chr4.1:32832527-32832546 MS.gene003766:CDS 40.0%
! AGTTTTTCCGTTGCACTCTT+AGG + chr4.1:32833242-32833261 MS.gene003766:intron 40.0%
! CCAAGCCTTTTCCAACTAAA+TGG - chr4.1:32832732-32832751 None:intergenic 40.0%
! CTTTTCCAACTAAATGGGGT+CGG - chr4.1:32832726-32832745 None:intergenic 40.0%
! GACCAAGCCTTGTAAATGAA+AGG + chr4.1:32832610-32832629 MS.gene003766:intron 40.0%
! TAGGAGTTGCTTTCTATCGT+GGG + chr4.1:32833552-32833571 MS.gene003766:CDS 40.0%
! TTTACAAGGCTTGGTCATGA+AGG - chr4.1:32832606-32832625 None:intergenic 40.0%
! TTTGAGACATCTGCCAAAGA+AGG + chr4.1:32834082-32834101 MS.gene003766:CDS 40.0%
! TTTGGGATTTGTTCTCCATG+TGG + chr4.1:32834606-32834625 MS.gene003766:intron 40.0%
! TTTTGGACAGTACACTTTGG+TGG + chr4.1:32833302-32833321 MS.gene003766:intron 40.0%
!! CTTTCAAGAGCGTTCTTCTA+CGG - chr4.1:32831402-32831421 None:intergenic 40.0%
!! TTGTTGATGATTTGCAGGGT+GGG + chr4.1:32832075-32832094 MS.gene003766:intron 40.0%
!! TTTCAAGAGCGTTCTTCTAC+GGG - chr4.1:32831401-32831420 None:intergenic 40.0%
!!! TTAGGAGCCTTTTTCGGTTA+AGG + chr4.1:32833260-32833279 MS.gene003766:intron 40.0%
AAAGGATGCCCTGAAAAGTG+GGG + chr4.1:32834138-32834157 MS.gene003766:CDS 45.0%
ACTAAATGGGGTCGGATACA+TGG - chr4.1:32832718-32832737 None:intergenic 45.0%
AGAAAGCAACTCCTAGGCTT+TGG - chr4.1:32833547-32833566 None:intergenic 45.0%
ATGAGATGGTGTTCATTGGC+TGG + chr4.1:32834250-32834269 MS.gene003766:intron 45.0%
ATGTGTCAGTGTCAGACATG+CGG + chr4.1:32831777-32831796 MS.gene003766:intron 45.0%
ATTCCTCCCTCCAGTTGTTA+AGG - chr4.1:32833631-32833650 None:intergenic 45.0%
CAAAGGATGCCCTGAAAAGT+GGG + chr4.1:32834137-32834156 MS.gene003766:CDS 45.0%
CAACATCAATTGTGTCTGGC+AGG - chr4.1:32834654-32834673 None:intergenic 45.0%
CACGATAGAAAGCAACTCCT+AGG - chr4.1:32833553-32833572 None:intergenic 45.0%
CGACCCCATTTAGTTGGAAA+AGG + chr4.1:32832724-32832743 MS.gene003766:intron 45.0%
CTGCCAGACACAATTGATGT+TGG + chr4.1:32834652-32834671 MS.gene003766:CDS 45.0%
GCACCATTCACAAACCTGTA+AGG - chr4.1:32832544-32832563 None:intergenic 45.0%
GGAAAATTCTCTGGATCGGA+AGG - chr4.1:32833820-32833839 None:intergenic 45.0%
GGCCTTTCATTTACAAGGCT+TGG - chr4.1:32832615-32832634 None:intergenic 45.0%
GGCGTGTTTAATGTACACAC+AGG - chr4.1:32832871-32832890 None:intergenic 45.0%
GGTTAAGAAGTCAGCTCCAA+TGG - chr4.1:32832490-32832509 None:intergenic 45.0%
GGTTTCAGAAAAGAAGGCTC+GGG + chr4.1:32834027-32834046 MS.gene003766:intron 45.0%
GTGTGTACATTAAACACGCC+TGG + chr4.1:32832871-32832890 MS.gene003766:intron 45.0%
TCTGACACTGACACATGTGT+AGG - chr4.1:32831773-32831792 None:intergenic 45.0%
TGTATCCGACCCCATTTAGT+TGG + chr4.1:32832718-32832737 MS.gene003766:intron 45.0%
TTGGAAACAGCAATCAGCCA+AGG + chr4.1:32834671-32834690 MS.gene003766:CDS 45.0%
TTGGACAGTACACTTTGGTG+GGG + chr4.1:32833304-32833323 MS.gene003766:intron 45.0%
TTGGTCACTGGACACATCTT+CGG + chr4.1:32831831-32831850 MS.gene003766:intron 45.0%
! AAAGGCTCCTAAGAGTGCAA+CGG - chr4.1:32833252-32833271 None:intergenic 45.0%
! AGGAGTTGCTTTCTATCGTG+GGG + chr4.1:32833553-32833572 MS.gene003766:CDS 45.0%
! CTAGGAGTTGCTTTCTATCG+TGG + chr4.1:32833551-32833570 MS.gene003766:CDS 45.0%
! GCACTCTTAGGAGCCTTTTT+CGG + chr4.1:32833254-32833273 MS.gene003766:intron 45.0%
! TGAGATGGTGTTCATTGGCT+GGG + chr4.1:32834251-32834270 MS.gene003766:intron 45.0%
! TTGCAGATTTGGGATACAGC+TGG + chr4.1:32833509-32833528 MS.gene003766:intron 45.0%
! TTGGAAACGGGCTTGTGTAT+GGG + chr4.1:32832969-32832988 MS.gene003766:intron 45.0%
! TTTCAGGGCATCCTTTGCTA+TGG - chr4.1:32834134-32834153 None:intergenic 45.0%
! TTTGGAAACGGGCTTGTGTA+TGG + chr4.1:32832968-32832987 MS.gene003766:intron 45.0%
!! GTTGTTGATGATTTGCAGGG+TGG + chr4.1:32832074-32832093 MS.gene003766:intron 45.0%
!! TGTTGATGATTTGCAGGGTG+GGG + chr4.1:32832076-32832095 MS.gene003766:intron 45.0%
!! TTCCTCTTCCCCACTTTTCA+GGG - chr4.1:32834149-32834168 None:intergenic 45.0%
ACACGACACATGTTGGTCAC+TGG + chr4.1:32831819-32831838 MS.gene003766:intron 50.0%
AGACATGCGGGACATTGTGT+AGG + chr4.1:32831790-32831809 MS.gene003766:intron 50.0%
AGCAATCAGCCAAGGTCATC+AGG + chr4.1:32834679-32834698 MS.gene003766:CDS 50.0%
CAACCTTAACAACTGGAGGG+AGG + chr4.1:32833625-32833644 MS.gene003766:CDS 50.0%
CACTCACATCCTGATGACCT+TGG - chr4.1:32834691-32834710 None:intergenic 50.0%
CAGGAGAGATTCCAAAGCCT+AGG + chr4.1:32833533-32833552 MS.gene003766:CDS 50.0%
CGGGCTTGTGTATGGGATTT+AGG + chr4.1:32832976-32832995 MS.gene003766:intron 50.0%
CTGTGAAATAGCGGCTATGG+CGG + chr4.1:32832243-32832262 MS.gene003766:intron 50.0%
GCAAAGGATGCCCTGAAAAG+TGG + chr4.1:32834136-32834155 MS.gene003766:CDS 50.0%
TGTGTCAGTGTCAGACATGC+GGG + chr4.1:32831778-32831797 MS.gene003766:intron 50.0%
! AGATGGTGTTCATTGGCTGG+GGG + chr4.1:32834253-32834272 MS.gene003766:intron 50.0%
! GAGATGGTGTTCATTGGCTG+GGG + chr4.1:32834252-32834271 MS.gene003766:intron 50.0%
! GGGCATCCTTTGCTATGGTT+TGG - chr4.1:32834129-32834148 None:intergenic 50.0%
!! AAGAGCGTTCTTCTACGGGA+AGG - chr4.1:32831397-32831416 None:intergenic 50.0%
!! CTAGGCTTTGGAATCTCTCC+TGG - chr4.1:32833535-32833554 None:intergenic 50.0%
!! CTTCCTCTTCCCCACTTTTC+AGG - chr4.1:32834150-32834169 None:intergenic 50.0%
!! TGATGGTGGGAACAGTAGAG+TGG + chr4.1:32833870-32833889 MS.gene003766:CDS 50.0%
!! TTGGCTGGGGGAGCATATTT+TGG + chr4.1:32834265-32834284 MS.gene003766:intron 50.0%
CAGAAAAGAAGGCTCGGGCA+TGG + chr4.1:32834032-32834051 MS.gene003766:CDS 55.0%
GACAGCGACACGACACATGT+TGG + chr4.1:32831812-32831831 MS.gene003766:intron 55.0%
GTCATCATTCTCGGCGACAG+CGG + chr4.1:32831421-32831440 MS.gene003766:CDS 55.0%
TCATCATTCTCGGCGACAGC+GGG + chr4.1:32831422-32831441 MS.gene003766:CDS 55.0%
TGCCCTGAAAAGTGGGGAAG+AGG + chr4.1:32834144-32834163 MS.gene003766:CDS 55.0%
! GATTTGGGATACAGCTGGCC+AGG + chr4.1:32833514-32833533 MS.gene003766:intron 55.0%
CGGGCATGGTGTGCAGCAAA+AGG + chr4.1:32834046-32834065 MS.gene003766:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 32831391 32834714 32831391 ID=MS.gene003766
chr4.1 mRNA 32831391 32834714 32831391 ID=MS.gene003766.t1;Parent=MS.gene003766
chr4.1 exon 32831391 32831443 32831391 ID=MS.gene003766.t1.exon1;Parent=MS.gene003766.t1
chr4.1 CDS 32831391 32831443 32831391 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32832092 32832118 32832092 ID=MS.gene003766.t1.exon2;Parent=MS.gene003766.t1
chr4.1 CDS 32832092 32832118 32832092 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32832449 32832548 32832449 ID=MS.gene003766.t1.exon3;Parent=MS.gene003766.t1
chr4.1 CDS 32832449 32832548 32832449 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32833515 32833661 32833515 ID=MS.gene003766.t1.exon4;Parent=MS.gene003766.t1
chr4.1 CDS 32833515 32833661 32833515 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32833811 32833891 32833811 ID=MS.gene003766.t1.exon5;Parent=MS.gene003766.t1
chr4.1 CDS 32833811 32833891 32833811 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32834028 32834173 32834028 ID=MS.gene003766.t1.exon6;Parent=MS.gene003766.t1
chr4.1 CDS 32834028 32834173 32834028 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
chr4.1 exon 32834648 32834714 32834648 ID=MS.gene003766.t1.exon7;Parent=MS.gene003766.t1
chr4.1 CDS 32834648 32834714 32834648 ID=cds.MS.gene003766.t1;Parent=MS.gene003766.t1
Gene Sequence

>MS.gene003766

ATGCCTTCCCGTAGAAGAACGCTCTTGAAAGTCATCATTCTCGGCGACAGCGGGTTCGTCTCTCGAACTCTTCAATTCTAGGGTTTTCCGATAATCATAATTATCATATTCTACAGATCTTATACAAATTTGTTTCCTTCTGCTTATTTTTATTCTTCGATCTTTGATTCAACTCAATTATTGACATGCAAGCTCAAAATTGGATCTTAGTTTGTCATTTTTCTTATTCTTGTCTGGATCACGAGAATTATAGCTATAAGTAACTTAATTTACAGGTTAATTTCTTATTCTTGTTTAGATAACAAGAGTCATATCTGGTGATGCGTGAACACGTATGATAATTTAAGAAAATGACATAATTCAATGTAATTACAATGTACCTACACATGTGTCAGTGTCAGACATGCGGGACATTGTGTAGGACAGCGACACGACACATGTTGGTCACTGGACACATCTTCGGTCAAAAGTCTCGGCGCTACAGAGTATATAGAGTAGCTTATTGCATAGGTGAATTTTTTCTTATAATTGTTTGCATCTCTAGAATCATATCTAAAGTAACTTAATTTAAAAAATTGTTTGGATATATTCAACCATGTTAATGTTAAGTTGATTTATGAGTTGAATTATTTGTTGTATCTACAGGTTTTTTCTTTTCTTTCTTTTTTTCTTAACATCGTAGTGTTGTTGATGATTTGCAGGGTGGGGAAGACGTCTTTGATGAATCAGTATCCTTCGATTTTTGTATAGGAAGTCAGTATTATGTTCAGGGTTAATCAACGAATAGTACTATTGCATAGCGGTATTTGAACTAATTGTTGTTGTTCCTCAATAGCTATTTAGTACAAAATACTGTGAAATAGCGGCTATGGCGGTGCTATAACACTTTTGCATAGCGGAATTTGAACAAATCACTATTTTCTGCGATCTGTAACTGACAACACTGATTCTATATTTGTTTTCAATTTTCACTGCAATTTTCTGAGGTTTTAGTATTGTATAGGGTAATGCTTTAAAAATATGCGGTCTCTGTGTTTCTCTTAACCTATATATTTTAGATATGTGAATAAGAAGTTTAGTAATCAGTACAAGGCAACCATTGGAGCTGACTTCTTAACCAAAGAAGTGCAATTTGAAGATAGGCTTTTCACCTTACAGGTTTGTGAATGGTGCTGCCTTGTGCATAATTTGATTTTGAGATGCTTGAAAATGCCTTCATGACCAAGCCTTGTAAATGAAAGGCCAGATTTACAAATTACCAAACCCTTTTTTTGGAATGTTTATCTTTCTGATATTACATAGATGGTTTATGGCGTAATTTGATCCATGTATCCGACCCCATTTAGTTGGAAAAGGCTTGGTTGTTGTTGTATTACATAGATGTTTTAGATTGTGCATTACTGATTTAATTGAAGAATTCGTAGGTCACAACCTCTTAAATGAAGGTTGAACATGTTTGTTGATACTGTGTTATCAGCCTGTGTGTACATTAAACACGCCTGGTAGTTTACTGTATTAAGTTTGTTACTTATTGCTCATTTTGATGTTAGAACGCCTGCATCCTAAAGTTTGCATTTTTTGGAAACGGGCTTGTGTATGGGATTTAGGAAGTGAATGATGATGTTTCCTGTCATTTTTGAGAAATTGTTTATTATATTTTTGACGATTGCCTTGGCACATGACTTTAAAATGTAACACACTATAACCTAACCGTTAGTTTGCACATGTATGTAATGTGACTTTTGTTAGTCTTAACATTGAGCATCTTTGACATATAGATTGAATCAAATGGGGAAGCGAACTAAATCTATTTAAATGATAACTATATTTCTAATGATTAATTAATAGCTAAGTTTTTCCGTTGCACTCTTAGGAGCCTTTTTCGGTTAAGGATTGTTAGGCTGTTTAATTTTTTGGACAGTACACTTTGGTGGGGTATAAAATTTAGCATATTACCGTCATGCTCTTTCAGTATTAGACATCCATGTTTTGTTTCTTGTGGAAATCATATCTGTGCTTGTTCTACATCTCATAATTATCTTGCTGTTTTTATTGAAATTTAAGTTAATATGGTAAAAGTTTTCTTTGCTTTTGTTTTAATTTTTAGCATTCTAAATCTTGCAGATTTGGGATACAGCTGGCCAGGAGAGATTCCAAAGCCTAGGAGTTGCTTTCTATCGTGGGGCTGATTGCTGTGTTCTTGTATATGATGTTAATTCAATGAAATCATTTGACAACCTTAACAACTGGAGGGAGGAATTTCTGATTCAAGTATGCTTGTGCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATAATTTTCAATTTTATTTATCATCTCAAGCAATGTAGAAGAATTTCATAACTTCTGAACTTTATGATCACTGCATCAGGCAAATCCTTCCGATCCAGAGAATTTTCCTTTTGTTGTTATAGGAAACAAGATCGACATTGATGGTGGGAACAGTAGAGTGGTATGTTTTTCCTCCCTTTTGCTATCTAACATGTTTCTTTTATTTCTTTCAAAAGCTTGCATGCACCAGATACATTCATGAAACACCTAAATATGTACTGCTAAACAGATTAACACACATAAGTTCTTGTGCACAGGTTTCAGAAAAGAAGGCTCGGGCATGGTGTGCAGCAAAAGGAAATATCCCATATTTTGAGACATCTGCCAAAGAAGGTATTAATGTCGAAGAAGCATTCCAAACCATAGCAAAGGATGCCCTGAAAAGTGGGGAAGAGGAAGAATTGTAAGTTCTTAAGCATGTGTATCTCTTACTTATGTGAACATGCTTCATAAAAAATGCATTAAGGGTATATCTGATTATGAGATGGTGTTCATTGGCTGGGGGAGCATATTTTGGTCCTACTAGTTGTTTTAGTTCACTATATCCATGTCTCTTGGAAACAAATGCATATAGGATTGATGTTTAATGATGGAGACAAACATGAACCATTTGCCATGTTAGGATTGATGTTTAATGATGGAGACAAACATGAACCATTTGCCATGTTATAATGCAAAGATTGATATGTTGGTTTGTCCATATAATAGTGGCGTGCAAAGAAATTTCAGTGTGTATTTCAGTTGCTGTATATTTGATAGTTACCCATAGATTATGAATCTTTTTGCTATTTGATAATGGGATAATTTAATTACTCCAATGTTACTGATGTTATGTTTTGGGATTTGTTCTCCATGTGGAAATTCGTGCTTGTTGAAGATACCTGCCAGACACAATTGATGTTGGAAACAGCAATCAGCCAAGGTCATCAGGATGTGAGTGCTGA
Protein sequence

>MS.gene003766.t1

MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPFVVIGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEEELYLPDTIDVGNSNQPRSSGCEC