AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08038.t1 MTR_1g097420 88.462 208 21 2 1 206 1 207 2.27e-135 377
MS.gene08038.t1 MTR_1g097420 78.298 235 21 3 1 206 1 234 1.98e-129 363
MS.gene08038.t1 MTR_8g092020 76.355 203 47 1 4 206 8 209 5.56e-116 328
MS.gene08038.t1 MTR_4g012940 73.913 207 53 1 1 206 1 207 9.23e-112 318
MS.gene08038.t1 MTR_6g039490 76.699 206 47 1 1 206 1 205 1.10e-111 318
MS.gene08038.t1 MTR_4g069850 73.913 207 52 2 1 206 1 206 6.00e-111 316
MS.gene08038.t1 MTR_2g101890 74.020 204 52 1 4 206 6 209 1.03e-110 315
MS.gene08038.t1 MTR_1452s0010 88.421 95 11 0 28 122 1 95 1.95e-58 179
MS.gene08038.t1 MTR_1663s0010 96.000 75 3 0 110 184 1 75 7.66e-48 151
MS.gene08038.t1 MTR_1686s0010 72.289 83 23 0 28 110 1 83 6.62e-42 137
MS.gene08038.t1 MTR_4g079350 41.212 165 90 3 8 172 13 170 2.75e-39 134
MS.gene08038.t1 MTR_2g096550 42.515 167 91 3 8 174 15 176 3.84e-39 134
MS.gene08038.t1 MTR_4g088090 40.000 165 92 3 8 172 13 170 1.08e-38 132
MS.gene08038.t1 MTR_2g005510 39.773 176 92 4 1 169 1 169 3.84e-38 131
MS.gene08038.t1 MTR_8g103550 40.000 175 97 4 1 174 1 168 6.47e-38 130
MS.gene08038.t1 MTR_1g052475 43.030 165 87 3 8 172 15 172 7.05e-38 130
MS.gene08038.t1 MTR_7g405790 41.975 162 87 3 8 169 15 169 1.24e-37 130
MS.gene08038.t1 MTR_2g014990 39.394 165 93 3 8 172 13 170 1.32e-37 130
MS.gene08038.t1 MTR_2g090865 40.606 165 91 3 8 172 11 168 1.42e-37 130
MS.gene08038.t1 MTR_6g021790 40.116 172 96 3 8 179 6 170 2.17e-37 129
MS.gene08038.t1 MTR_1g068730 39.011 182 105 3 8 189 15 190 2.23e-37 129
MS.gene08038.t1 MTR_1g068740 38.462 182 106 3 8 189 15 190 8.93e-37 128
MS.gene08038.t1 MTR_5g013900 35.294 204 118 4 10 206 11 207 1.06e-36 127
MS.gene08038.t1 MTR_2g005500 35.714 196 114 4 8 203 9 192 1.34e-36 127
MS.gene08038.t1 MTR_8g090215 37.500 208 108 6 10 206 11 207 1.44e-36 127
MS.gene08038.t1 MTR_2g075950 39.394 165 93 3 8 172 13 170 2.10e-36 127
MS.gene08038.t1 MTR_8g036220 40.491 163 90 3 8 170 16 171 2.29e-36 127
MS.gene08038.t1 MTR_7g100020 40.719 167 93 3 8 174 15 175 2.59e-36 126
MS.gene08038.t1 MTR_8g089985 40.000 165 92 3 8 172 17 174 3.94e-36 126
MS.gene08038.t1 MTR_1g115325 40.120 167 94 3 8 174 15 175 4.37e-36 126
MS.gene08038.t1 MTR_3g069510 38.788 165 94 3 8 172 12 169 4.68e-36 126
MS.gene08038.t1 MTR_4g098950 35.468 203 118 5 10 206 11 206 5.12e-36 125
MS.gene08038.t1 MTR_0262s0050 42.424 165 88 3 8 172 15 172 5.54e-36 126
MS.gene08038.t1 MTR_4g064897 37.576 165 96 3 8 172 12 169 8.89e-36 125
MS.gene08038.t1 MTR_3g086980 40.000 165 92 3 8 172 16 173 1.16e-35 125
MS.gene08038.t1 MTR_2g027660 38.690 168 96 3 8 175 6 166 1.61e-35 124
MS.gene08038.t1 MTR_7g051940 40.123 162 90 3 8 169 13 167 1.87e-35 124
MS.gene08038.t1 MTR_8g006970 39.759 166 93 3 8 173 8 166 2.21e-35 123
MS.gene08038.t1 MTR_8g031680 38.596 171 98 3 9 179 7 170 2.99e-35 124
MS.gene08038.t1 MTR_5g076590 39.394 165 93 3 10 174 12 169 3.75e-35 123
MS.gene08038.t1 MTR_8g006970 39.759 166 93 3 8 173 22 180 4.45e-35 123
MS.gene08038.t1 MTR_7g081700 36.410 195 112 4 8 202 8 190 6.79e-35 122
MS.gene08038.t1 MTR_3g087160 34.975 203 119 4 10 206 11 206 7.23e-35 122
MS.gene08038.t1 MTR_3g064390 39.394 165 93 3 10 174 12 169 8.60e-35 122
MS.gene08038.t1 MTR_2g083860 36.970 165 97 2 8 172 13 170 8.67e-34 120
MS.gene08038.t1 MTR_8g031870 36.047 172 103 3 3 174 1 165 9.54e-34 119
MS.gene08038.t1 MTR_4g063160 39.645 169 94 4 8 174 15 177 8.72e-33 117
MS.gene08038.t1 MTR_8g107070 36.022 186 110 4 8 191 14 192 1.34e-32 118
MS.gene08038.t1 MTR_8g027220 38.182 165 95 3 8 172 26 183 1.68e-32 117
MS.gene08038.t1 MTR_6g079550 38.182 165 95 3 8 172 12 169 2.90e-32 116
MS.gene08038.t1 MTR_1g078200 37.126 167 98 3 8 174 14 173 3.54e-32 116
MS.gene08038.t1 MTR_8g031660 35.393 178 108 3 8 185 6 176 1.27e-31 114
MS.gene08038.t1 MTR_1812s0010 67.568 74 24 0 110 183 1 74 3.74e-31 109
MS.gene08038.t1 MTR_7g117910 34.328 201 122 4 8 206 20 212 7.57e-31 112
MS.gene08038.t1 MTR_8g031830 35.976 164 98 3 3 166 1 157 6.38e-29 107
MS.gene08038.t1 MTR_1g068730 41.463 123 68 1 8 130 15 133 1.14e-28 105
MS.gene08038.t1 MTR_1g094220 35.928 167 99 4 9 174 32 191 1.27e-28 106
MS.gene08038.t1 MTR_1g068740 41.463 123 68 1 8 130 15 133 1.43e-28 106
MS.gene08038.t1 MTR_2g102060 35.152 165 100 3 10 174 12 169 3.06e-28 105
MS.gene08038.t1 MTR_3g064390 41.322 121 67 1 10 130 12 128 3.94e-28 103
MS.gene08038.t1 MTR_7g103070 33.663 202 122 6 10 205 18 213 1.29e-27 104
MS.gene08038.t1 MTR_4g099470 36.517 178 93 6 37 206 13 178 2.49e-27 102
MS.gene08038.t1 MTR_1g094220 34.911 169 102 4 9 176 32 193 7.85e-27 102
MS.gene08038.t1 MTR_1g062760 35.437 206 112 9 9 204 15 209 9.87e-27 102
MS.gene08038.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 1.32e-26 101
MS.gene08038.t1 MTR_1g094220 35.185 162 97 4 9 169 32 186 2.12e-26 101
MS.gene08038.t1 MTR_8g093740 38.037 163 93 6 8 169 13 168 3.55e-26 100
MS.gene08038.t1 MTR_1g029450 38.037 163 93 6 8 169 17 172 9.98e-26 99.4
MS.gene08038.t1 MTR_1g090717 36.139 202 118 8 9 205 16 211 2.18e-25 98.6
MS.gene08038.t1 MTR_3g096350 37.805 164 92 6 8 169 12 167 7.25e-25 97.1
MS.gene08038.t1 MTR_3g107713 27.513 189 124 4 9 197 14 189 1.04e-23 94.4
MS.gene08038.t1 MTR_3g107707 27.513 189 124 4 9 197 14 189 1.05e-23 94.4
MS.gene08038.t1 MTR_3g107717 27.513 189 124 4 9 197 14 189 1.13e-23 94.4
MS.gene08038.t1 MTR_5g036990 62.857 70 25 1 39 107 32 101 2.12e-22 88.2
MS.gene08038.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 1.83e-21 86.7
MS.gene08038.t1 MTR_3g096350 40.650 123 66 4 8 128 12 129 1.96e-21 86.7
MS.gene08038.t1 MTR_6g087980 29.469 207 123 7 8 205 6 198 1.25e-20 85.9
MS.gene08038.t1 MTR_4g113620 26.601 203 120 7 1 197 1 180 5.09e-19 81.6
MS.gene08038.t1 MTR_8g093740 37.879 132 75 5 39 169 10 135 1.11e-18 80.1
MS.gene08038.t1 MTR_2g090875 30.409 171 104 5 8 169 6 170 3.00e-18 79.3
MS.gene08038.t1 MTR_4g088055 30.168 179 110 5 8 177 6 178 7.22e-18 78.2
MS.gene08038.t1 MTR_5g022600 30.994 171 103 6 8 169 6 170 7.92e-17 75.5
MS.gene08038.t1 MTR_4g073250 28.649 185 117 5 8 183 6 184 1.06e-16 75.1
MS.gene08038.t1 MTR_8g075240 31.579 171 102 6 8 169 6 170 1.40e-16 74.7
MS.gene08038.t1 MTR_7g103070 32.919 161 96 6 50 204 2 156 1.47e-16 73.9
MS.gene08038.t1 MTR_2g093510 57.143 70 30 0 116 185 758 827 6.31e-16 75.9
MS.gene08038.t1 MTR_3g078260 29.775 178 110 5 1 169 1 172 2.00e-15 72.0
MS.gene08038.t1 MTR_3g078260 32.031 128 80 4 1 127 1 122 7.39e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08038.t1 AT4G09720 82.039 206 37 0 1 206 1 206 5.37e-129 362
MS.gene08038.t1 AT4G09720 80.095 211 37 1 1 206 1 211 1.49e-125 353
MS.gene08038.t1 AT4G09720 77.880 217 37 1 1 206 1 217 2.53e-125 353
MS.gene08038.t1 AT1G22740 83.010 206 32 2 1 206 1 203 1.06e-124 350
MS.gene08038.t1 AT2G21880 72.642 212 49 3 2 206 3 212 3.45e-112 319
MS.gene08038.t1 AT3G16100 72.330 206 57 0 1 206 1 206 3.40e-111 317
MS.gene08038.t1 AT1G52280 72.816 206 56 0 1 206 1 206 3.76e-111 317
MS.gene08038.t1 AT3G18820 73.913 207 52 2 1 206 1 206 4.23e-109 311
MS.gene08038.t1 AT1G49300 70.531 207 59 2 1 206 1 206 2.17e-105 302
MS.gene08038.t1 AT1G49300 70.531 207 59 2 1 206 1 206 2.17e-105 302
MS.gene08038.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene08038.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene08038.t1 AT4G09720 79.532 171 35 0 36 206 2 172 5.26e-103 295
MS.gene08038.t1 AT2G21880 68.868 212 49 4 2 206 3 204 1.59e-102 295
MS.gene08038.t1 AT2G21880 70.899 189 46 3 25 206 1 187 6.15e-97 280
MS.gene08038.t1 AT2G21880 70.899 189 46 3 25 206 1 187 6.15e-97 280
MS.gene08038.t1 AT5G39620 56.931 202 86 1 6 206 3 204 8.77e-83 244
MS.gene08038.t1 AT3G12160 39.336 211 107 5 8 204 15 218 4.49e-40 136
MS.gene08038.t1 AT1G28550 41.212 165 90 3 8 172 13 170 6.44e-39 133
MS.gene08038.t1 AT3G15060 40.606 165 91 3 8 172 13 170 8.57e-39 133
MS.gene08038.t1 AT5G60860 40.000 165 92 3 8 172 13 170 1.11e-38 133
MS.gene08038.t1 AT2G33870 39.394 165 93 3 8 172 13 170 2.32e-38 132
MS.gene08038.t1 AT1G09630 41.212 165 90 3 8 172 12 169 3.48e-38 131
MS.gene08038.t1 AT5G47960 41.212 165 90 3 8 172 15 172 1.81e-37 130
MS.gene08038.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene08038.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene08038.t1 AT3G53610 36.683 199 117 4 8 205 15 205 3.19e-37 129
MS.gene08038.t1 AT5G45750 39.394 165 93 3 8 172 13 170 4.17e-37 129
MS.gene08038.t1 AT2G44610 36.585 205 115 5 10 206 11 208 4.17e-37 128
MS.gene08038.t1 AT5G59840 40.719 167 93 2 8 174 15 175 6.35e-37 128
MS.gene08038.t1 AT4G35860 37.791 172 100 3 8 179 6 170 2.98e-36 126
MS.gene08038.t1 AT3G11730 36.139 202 117 5 8 204 8 202 4.25e-36 125
MS.gene08038.t1 AT5G10260 36.058 208 111 6 10 206 11 207 6.33e-36 125
MS.gene08038.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene08038.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene08038.t1 AT3G46060 35.897 195 119 3 8 202 15 203 6.56e-36 125
MS.gene08038.t1 AT5G59150 37.654 162 94 3 8 169 12 166 1.52e-35 125
MS.gene08038.t1 AT4G17170 35.071 211 116 6 8 204 6 209 1.56e-35 124
MS.gene08038.t1 AT2G43130 37.791 172 100 3 8 179 12 176 1.66e-35 124
MS.gene08038.t1 AT4G17530 36.453 203 115 5 8 205 8 201 2.27e-35 124
MS.gene08038.t1 AT1G05810 39.157 166 94 3 4 169 8 166 3.36e-35 124
MS.gene08038.t1 AT5G47200 36.453 203 115 5 8 205 8 201 3.46e-35 123
MS.gene08038.t1 AT1G16920 38.182 165 95 2 8 172 13 170 4.26e-35 123
MS.gene08038.t1 AT1G07410 36.970 165 97 3 8 172 12 169 5.70e-35 123
MS.gene08038.t1 AT1G05810 39.157 166 94 3 4 169 54 212 6.84e-35 124
MS.gene08038.t1 AT4G18800 37.576 165 96 3 8 172 13 170 7.15e-35 123
MS.gene08038.t1 AT5G64990 35.885 209 111 5 10 206 9 206 8.43e-35 122
MS.gene08038.t1 AT5G65270 40.741 162 89 3 8 169 17 171 9.04e-35 123
MS.gene08038.t1 AT4G18430 35.152 165 100 3 8 172 13 170 9.79e-35 122
MS.gene08038.t1 AT4G17160 36.408 206 112 7 9 204 7 203 9.97e-35 122
MS.gene08038.t1 AT2G31680 36.047 172 103 3 8 179 12 176 1.62e-34 122
MS.gene08038.t1 AT4G39890 38.323 167 93 3 9 173 10 168 2.03e-34 122
MS.gene08038.t1 AT1G01200 40.000 165 93 3 8 172 28 186 2.96e-34 122
MS.gene08038.t1 AT3G09900 39.560 182 104 2 8 189 15 190 3.00e-34 121
MS.gene08038.t1 AT5G03520 39.560 182 104 3 8 189 15 190 3.77e-34 121
MS.gene08038.t1 AT4G39990 38.889 162 92 3 8 169 17 171 7.34e-34 120
MS.gene08038.t1 AT1G73640 38.037 163 94 3 8 170 13 168 7.75e-34 120
MS.gene08038.t1 AT1G18200 36.970 165 97 3 8 172 13 170 7.90e-34 120
MS.gene08038.t1 AT2G22290 35.714 210 109 7 10 206 11 207 1.10e-33 119
MS.gene08038.t1 AT3G46830 36.364 165 98 3 8 172 12 169 1.10e-33 120
MS.gene08038.t1 AT3G46830 36.364 165 98 3 8 172 12 169 1.10e-33 120
MS.gene08038.t1 AT1G02130 37.931 174 99 4 8 181 8 172 1.82e-33 119
MS.gene08038.t1 AT5G45130 39.394 165 93 3 10 174 12 169 4.38e-33 118
MS.gene08038.t1 AT1G06400 35.758 165 99 3 8 172 13 170 2.23e-32 116
MS.gene08038.t1 AT4G19640 38.182 165 95 3 10 174 12 169 2.39e-32 116
MS.gene08038.t1 AT5G64990 34.722 216 111 6 10 206 9 213 4.14e-32 115
MS.gene08038.t1 AT5G45130 39.264 163 92 3 12 174 22 177 6.86e-32 115
MS.gene08038.t1 AT3G07410 37.654 162 94 3 8 169 12 166 9.59e-32 115
MS.gene08038.t1 AT5G47520 38.323 167 96 4 8 174 14 173 5.87e-31 113
MS.gene08038.t1 AT3G54840 36.527 167 98 4 9 174 34 193 6.22e-29 107
MS.gene08038.t1 AT3G54840 36.364 165 97 4 11 174 2 159 1.92e-28 105
MS.gene08038.t1 AT3G54840 36.420 162 95 4 9 169 34 188 7.35e-28 104
MS.gene08038.t1 AT4G19640 40.833 120 67 1 10 129 12 127 1.47e-27 102
MS.gene08038.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene08038.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene08038.t1 AT1G43890 39.306 173 93 7 8 175 13 178 3.98e-27 103
MS.gene08038.t1 AT4G19640 40.833 120 67 1 10 129 12 127 8.76e-27 101
MS.gene08038.t1 AT5G03520 39.726 146 82 3 44 189 41 180 3.44e-26 100
MS.gene08038.t1 AT5G03530 38.095 168 92 6 9 173 14 172 5.42e-26 100
MS.gene08038.t1 AT5G03530 38.095 168 92 6 9 173 14 172 5.42e-26 100
MS.gene08038.t1 AT5G20010 28.042 189 123 4 9 197 14 189 8.22e-25 97.4
MS.gene08038.t1 AT5G20020 28.042 189 123 4 9 197 14 189 1.23e-24 96.7
MS.gene08038.t1 AT5G55190 27.513 189 124 4 9 197 14 189 9.97e-24 94.4
MS.gene08038.t1 AT4G35860 36.923 130 75 3 50 179 2 124 1.25e-23 92.8
MS.gene08038.t1 AT4G28950 30.732 205 122 7 8 205 6 197 5.15e-23 92.4
MS.gene08038.t1 AT5G55080 27.711 166 110 3 9 174 14 169 8.04e-23 92.0
MS.gene08038.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene08038.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene08038.t1 AT3G09910 34.940 166 100 6 9 173 14 172 6.69e-20 84.0
MS.gene08038.t1 AT5G59150 35.833 120 70 3 50 169 3 115 8.09e-20 82.8
MS.gene08038.t1 AT3G09910 34.940 166 100 6 9 173 14 172 1.02e-19 83.2
MS.gene08038.t1 AT3G09910 34.940 166 100 6 9 173 14 172 1.02e-19 83.2
MS.gene08038.t1 AT5G45970 29.213 178 113 4 8 177 6 178 1.37e-18 80.5
MS.gene08038.t1 AT2G44690 30.168 179 110 5 8 177 18 190 4.31e-18 79.3
MS.gene08038.t1 AT1G20090 30.168 179 110 5 8 177 5 177 3.51e-17 76.6
MS.gene08038.t1 AT1G75840 30.168 179 110 5 8 177 6 178 6.47e-17 75.9
MS.gene08038.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene08038.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene08038.t1 AT4G35020 30.168 179 110 5 8 177 6 178 1.02e-16 75.5
MS.gene08038.t1 AT3G51300 30.409 171 104 5 8 169 6 170 1.39e-16 75.1
MS.gene08038.t1 AT3G48040 30.337 178 109 5 1 169 1 172 4.70e-16 73.9
MS.gene08038.t1 AT5G62880 30.337 178 109 5 1 169 1 172 6.38e-16 73.6
MS.gene08038.t1 AT2G17800 29.825 171 105 5 8 169 6 170 8.66e-16 72.8
MS.gene08038.t1 AT2G17800 29.825 171 105 5 8 169 6 170 8.66e-16 72.8
MS.gene08038.t1 AT4G35950 29.825 171 105 5 8 169 6 170 1.16e-15 72.4
MS.gene08038.t1 AT5G62880 30.319 188 111 6 1 174 1 182 3.37e-15 71.2
MS.gene08038.t1 AT3G48040 29.586 169 104 5 1 160 1 163 1.13e-13 66.6
MS.gene08038.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.13e-12 63.2
MS.gene08038.t1 AT4G35020 32.231 121 75 4 8 127 6 120 1.13e-12 63.2

Find 41 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACTCAAAGTTATCGTTCT+TGG 0.212272 6.3:-33974438 MS.gene08038:CDS
TTGTTTCCAAGCAATATAAA+TGG 0.243659 6.3:+33970230 None:intergenic
GGAAAAGTGCTTGGATTAGA+AGG 0.279843 6.3:+33970251 None:intergenic
CATGTCTTGCTCACGTTCAT+TGG 0.341105 6.3:+33969982 None:intergenic
CATTTGATACACTTGATAAC+TGG 0.350734 6.3:-33972271 MS.gene08038:CDS
TGCTCATTCTCTGGAACAAC+AGG 0.356385 6.3:+33968385 None:intergenic
GTCATCGATCTGCAATTCTT+TGG 0.364093 6.3:+33972534 None:intergenic
TTCATTGGCTAATGCGGTCT+TGG 0.384901 6.3:+33969997 None:intergenic
CCACCCCTCTGCTCATTCTC+TGG 0.385786 6.3:+33968376 None:intergenic
GGAAACAAAGTTGATATTGA+TGG 0.397484 6.3:-33970215 MS.gene08038:CDS
GCACGAGGAGTTTCTGAAAC+AGG 0.403015 6.3:-33972249 MS.gene08038:intron
TTTGCAGATGTCTCAAAGTA+AGG 0.412467 6.3:+33970058 None:intergenic
GGAACAACAGGCTCCGGAAT+AGG 0.412607 6.3:+33968397 None:intergenic
TTCTCTGGAACAACAGGCTC+CGG 0.445505 6.3:+33968391 None:intergenic
AAGGAGTGGTGTGCCTCAAA+AGG 0.461942 6.3:-33970088 MS.gene08038:CDS
CAGGAGAGATTTCAAAGTCT+TGG 0.477942 6.3:-33972356 MS.gene08038:CDS
GAAAAGTGCTTGGATTAGAA+GGG 0.482693 6.3:+33970252 None:intergenic
GAGTAAAGTTCTTCTGCGTA+AGG 0.495389 6.3:+33974455 None:intergenic
GATATGGGACACTGCAGGGC+AGG 0.508321 6.3:-33972375 MS.gene08038:CDS
AATATAAATGGAAAAGTGCT+TGG 0.513022 6.3:+33970242 None:intergenic
CTCACGTTCATTGGCTAATG+CGG 0.541940 6.3:+33969991 None:intergenic
CAGCAATATAAAGCGACAAT+CGG 0.545888 6.3:-33972571 MS.gene08038:CDS
TTGTAGATATGGGACACTGC+AGG 0.562646 6.3:-33972380 MS.gene08038:intron
ACAAAGTTGATATTGATGGC+GGG 0.570371 6.3:-33970211 MS.gene08038:CDS
GTAAACGAGAACACAGCAAT+CGG 0.572135 6.3:+33972313 None:intergenic
AGGAGTGGTGTGCCTCAAAA+GGG 0.578968 6.3:-33970087 MS.gene08038:CDS
GTTATCGTTCTTGGAGACAG+TGG 0.595335 6.3:-33974429 MS.gene08038:CDS
TTACTTTGAGACATCTGCAA+AGG 0.600040 6.3:-33970056 MS.gene08038:CDS
TTATCGTTCTTGGAGACAGT+GGG 0.601568 6.3:-33974428 MS.gene08038:intron
AACAAAGTTGATATTGATGG+CGG 0.603275 6.3:-33970212 MS.gene08038:CDS
TGTAGATATGGGACACTGCA+GGG 0.605102 6.3:-33972379 MS.gene08038:intron
TGTTCCAGAGAATGAGCAGA+GGG 0.618287 6.3:-33968380 MS.gene08038:CDS
CTGATAAGAAAGCAAAGGAG+TGG 0.631616 6.3:-33970102 MS.gene08038:CDS
CCAGAGAATGAGCAGAGGGG+TGG 0.645887 6.3:-33968376 MS.gene08038:CDS
GGTTTCTGATAAGAAAGCAA+AGG 0.657913 6.3:-33970107 MS.gene08038:CDS
ATGCGGTCTTGGCAATACGT+AGG 0.682683 6.3:+33970008 None:intergenic
CCACTTGTAGAGTAACTAGT+CGG 0.695643 6.3:+33972512 None:intergenic
TTGTTCCAGAGAATGAGCAG+AGG 0.709082 6.3:-33968381 MS.gene08038:CDS
TGATGGCGGGAATAGTCGAG+TGG 0.710562 6.3:-33970198 MS.gene08038:intron
TACACTTGATAACTGGCACG+AGG 0.736931 6.3:-33972264 MS.gene08038:CDS
GTTCCAGAGAATGAGCAGAG+GGG 0.763638 6.3:-33968379 MS.gene08038:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAATTTATAAGATTTAA+TGG + chr6.3:33973658-33973677 None:intergenic 10.0%
!! TCAAATTTATAAGATTTAAT+GGG + chr6.3:33973657-33973676 None:intergenic 10.0%
!!! CATTAAATTTAAAATAATAG+AGG - chr6.3:33969880-33969899 MS.gene08038:intron 10.0%
!!! CTCTATTATTTTAAATTTAA+TGG + chr6.3:33969882-33969901 None:intergenic 10.0%
!!! TTTTCTATATTTTTTTATTG+TGG - chr6.3:33968914-33968933 MS.gene08038:intron 10.0%
!! AAATGAAGTTATAGTATTAA+TGG + chr6.3:33971574-33971593 None:intergenic 15.0%
!! AATGAAGTTATAGTATTAAT+GGG + chr6.3:33971573-33971592 None:intergenic 15.0%
!! ATTAAAGATAAGAAAATGAT+AGG - chr6.3:33971953-33971972 MS.gene08038:intron 15.0%
!! CAAATTTATAAGATTTAATG+GGG + chr6.3:33973656-33973675 None:intergenic 15.0%
!! TAACAAAATTAGAAAAATAG+AGG + chr6.3:33970611-33970630 None:intergenic 15.0%
!! TTAAAGATAAGAAAATGATA+GGG - chr6.3:33971954-33971973 MS.gene08038:intron 15.0%
!!! ACATACATAGTTTTAAATAA+AGG + chr6.3:33969514-33969533 None:intergenic 15.0%
!!! ATTTTATAATTTGTTTAGTG+TGG - chr6.3:33972493-33972512 MS.gene08038:intron 15.0%
!!! ATTTTGTTTTCATTTTTGTT+AGG - chr6.3:33968482-33968501 MS.gene08038:intron 15.0%
!!! CTATTTTATTTTTCGAATAT+CGG - chr6.3:33970177-33970196 MS.gene08038:intron 15.0%
!!! TATTTTTAGGTTTTAGTTTT+GGG - chr6.3:33973298-33973317 MS.gene08038:intron 15.0%
!!! TTATTTTTAGGTTTTAGTTT+TGG - chr6.3:33973297-33973316 MS.gene08038:intron 15.0%
!!! TTTTGATATTGATTAGAATT+GGG - chr6.3:33969228-33969247 MS.gene08038:intron 15.0%
!!! TTTTGTTTTCATTTTTGTTA+GGG - chr6.3:33968483-33968502 MS.gene08038:intron 15.0%
!!! TTTTTGATATTGATTAGAAT+TGG - chr6.3:33969227-33969246 MS.gene08038:intron 15.0%
!! AACCACAACAAAAAAAAAAA+TGG + chr6.3:33968801-33968820 None:intergenic 20.0%
!! AATACTATAACTTCATTTCA+TGG - chr6.3:33971576-33971595 MS.gene08038:intron 20.0%
!! ATATCTATACAAGTAGTTAA+TGG + chr6.3:33970213-33970232 None:intergenic 20.0%
!! ATCTTATAAATTTGATCGTA+TGG - chr6.3:33973662-33973681 MS.gene08038:intron 20.0%
!! ATTCTTTGGTGAAATAATAA+TGG + chr6.3:33971447-33971466 None:intergenic 20.0%
!! TAAAATGGTAATTAATGAAC+TGG + chr6.3:33972531-33972550 None:intergenic 20.0%
!! TAAATCATTTATTGAAAGAG+AGG - chr6.3:33974175-33974194 MS.gene08038:intron 20.0%
!! TAAATTTAATGGCTCATTAA+TGG + chr6.3:33969871-33969890 None:intergenic 20.0%
!! TGTATAGCCTATAATTTATT+TGG + chr6.3:33970676-33970695 None:intergenic 20.0%
!! TTCTTTGGTGAAATAATAAT+GGG + chr6.3:33971446-33971465 None:intergenic 20.0%
!!! AAAAGTTTAAAATCAAACTG+TGG + chr6.3:33973633-33973652 None:intergenic 20.0%
!!! ACAGTTTTACATAAAAATCT+GGG + chr6.3:33969827-33969846 None:intergenic 20.0%
!!! GGGAATTTTCATATATTTAT+TGG - chr6.3:33971974-33971993 MS.gene08038:intron 20.0%
!!! GTTTGATTTAGATCTATTTA+AGG - chr6.3:33970143-33970162 MS.gene08038:intron 20.0%
!!! TAATTACAATCTTTTCCTTT+GGG + chr6.3:33973217-33973236 None:intergenic 20.0%
!!! TACAGTTTTACATAAAAATC+TGG + chr6.3:33969828-33969847 None:intergenic 20.0%
!!! TGTAGTTTTGCATTATTTTT+AGG - chr6.3:33973285-33973304 MS.gene08038:intron 20.0%
!!! TTCCATTTTTTTTTTTGTTG+TGG - chr6.3:33968796-33968815 MS.gene08038:intron 20.0%
!!! TTGATAATCATAGTTTAATG+CGG - chr6.3:33969743-33969762 MS.gene08038:intron 20.0%
!!! TTTGATATTGATTAGAATTG+GGG - chr6.3:33969229-33969248 MS.gene08038:intron 20.0%
!!! TTTTCTAATTTTGTTACTCT+CGG - chr6.3:33970615-33970634 MS.gene08038:intron 20.0%
! AAAACTGAAAATGAAGTTTG+TGG + chr6.3:33968432-33968451 None:intergenic 25.0%
! AAATTATATAACCTGCATCA+TGG - chr6.3:33972320-33972339 MS.gene08038:CDS 25.0%
! AACAGTAACACTTATTTAGA+GGG + chr6.3:33971277-33971296 None:intergenic 25.0%
! AATAATCTCTACCCTAATTA+TGG + chr6.3:33974282-33974301 None:intergenic 25.0%
! AATGGTTATGAATGAATCAT+CGG - chr6.3:33971107-33971126 MS.gene08038:intron 25.0%
! ACATAGTACATACAACATTA+GGG + chr6.3:33969482-33969501 None:intergenic 25.0%
! AGATAGTTTATGCAAACAAT+TGG + chr6.3:33973375-33973394 None:intergenic 25.0%
! ATGATTCAGAGAAAATAGTA+AGG + chr6.3:33969978-33969997 None:intergenic 25.0%
! ATTACCAAGATTCAAAATCT+GGG + chr6.3:33968753-33968772 None:intergenic 25.0%
! ATTAGAATTGGGGTAAAATA+CGG - chr6.3:33969239-33969258 MS.gene08038:intron 25.0%
! ATTTACTTCGTAGAAATTCA+AGG + chr6.3:33972304-33972323 None:intergenic 25.0%
! ATTTATAGCTATACGTATTC+AGG + chr6.3:33973157-33973176 None:intergenic 25.0%
! GTCTAGGAAATAAACATATT+TGG + chr6.3:33972909-33972928 None:intergenic 25.0%
! GTTGAGTCCAAATAAATTAT+AGG - chr6.3:33970666-33970685 MS.gene08038:intron 25.0%
! TAACAGTAACACTTATTTAG+AGG + chr6.3:33971278-33971297 None:intergenic 25.0%
! TACATAGTACATACAACATT+AGG + chr6.3:33969483-33969502 None:intergenic 25.0%
! TAGTGGTGTTTATTTCAATT+GGG - chr6.3:33968642-33968661 MS.gene08038:intron 25.0%
! TATAGGCACATTAATAATGT+GGG + chr6.3:33971329-33971348 None:intergenic 25.0%
! TCTGAATCATTGGTAAATTA+TGG - chr6.3:33969988-33970007 MS.gene08038:CDS 25.0%
! TGTGTTTCATTCCATAATTA+GGG - chr6.3:33974268-33974287 MS.gene08038:intron 25.0%
! TTACATAACAAATCATACTG+TGG + chr6.3:33972395-33972414 None:intergenic 25.0%
! TTAGTGGTGTTTATTTCAAT+TGG - chr6.3:33968641-33968660 MS.gene08038:intron 25.0%
! TTATAGGCACATTAATAATG+TGG + chr6.3:33971330-33971349 None:intergenic 25.0%
! TTATGTAATTGAACTGCTAT+GGG - chr6.3:33972407-33972426 MS.gene08038:intron 25.0%
! TTGACATGCTTAATGAATAT+TGG - chr6.3:33969931-33969950 MS.gene08038:intron 25.0%
! TTGTGTTTCATTCCATAATT+AGG - chr6.3:33974267-33974286 MS.gene08038:intron 25.0%
! TTGTTTCCAAGCAATATAAA+TGG + chr6.3:33972595-33972614 None:intergenic 25.0%
! TTTAGTCATCATTAACATTG+AGG + chr6.3:33971381-33971400 None:intergenic 25.0%
! TTTATAGCTATACGTATTCA+GGG + chr6.3:33973156-33973175 None:intergenic 25.0%
! TTTGATCTAATTCAATGATG+TGG - chr6.3:33973685-33973704 MS.gene08038:intron 25.0%
!! ACTTTTCCATTTATATTGCT+TGG - chr6.3:33972586-33972605 MS.gene08038:CDS 25.0%
!! ATGATGGAAAAAAGATACAA+TGG + chr6.3:33971744-33971763 None:intergenic 25.0%
!! GATCTATTTAAGGTTATTCA+AGG - chr6.3:33970153-33970172 MS.gene08038:intron 25.0%
!! GTAATTACAATCTTTTCCTT+TGG + chr6.3:33973218-33973237 None:intergenic 25.0%
!! TACTATTTTCTCTGAATCAT+TGG - chr6.3:33969978-33969997 MS.gene08038:intron 25.0%
!! TTGATTTTCTTCCTTCTTTT+GGG - chr6.3:33973727-33973746 MS.gene08038:intron 25.0%
!! TTTTCTTTAGTGTCTATGAT+AGG - chr6.3:33972931-33972950 MS.gene08038:intron 25.0%
!!! AAAACCCTACTCTTATTTTT+CGG + chr6.3:33973851-33973870 None:intergenic 25.0%
!!! AATATAAATGGAAAAGTGCT+TGG + chr6.3:33972583-33972602 None:intergenic 25.0%
!!! CTTTGAAATTATGTTGACAA+TGG - chr6.3:33970761-33970780 MS.gene08038:intron 25.0%
!!! TATTTAGTTCTTACTTGTCT+TGG - chr6.3:33971036-33971055 MS.gene08038:intron 25.0%
AATAGAGGGCAAATACTATT+TGG - chr6.3:33969895-33969914 MS.gene08038:intron 30.0%
AATGAATATTGGAGATTGGT+AGG - chr6.3:33969942-33969961 MS.gene08038:intron 30.0%
AATTATTCATCTCCTGCTTA+AGG - chr6.3:33972672-33972691 MS.gene08038:intron 30.0%
AATTTCTCCATGATCGTAAT+CGG + chr6.3:33969267-33969286 None:intergenic 30.0%
ACAATTCTCCATAATATCGA+AGG + chr6.3:33969385-33969404 None:intergenic 30.0%
ACAGTAACACTTATTTAGAG+GGG + chr6.3:33971276-33971295 None:intergenic 30.0%
ACAGTAGTATTTAACATAGG+GGG - chr6.3:33973471-33973490 MS.gene08038:intron 30.0%
ACAGTATGTAATGTGTTACA+AGG + chr6.3:33972131-33972150 None:intergenic 30.0%
ACGATACGATTACAAAATCT+CGG + chr6.3:33968991-33969010 None:intergenic 30.0%
ACGTATAGCTATAAATCACA+TGG - chr6.3:33973161-33973180 MS.gene08038:intron 30.0%
AGCAAATCAGAAAATTGCAA+AGG + chr6.3:33968538-33968557 None:intergenic 30.0%
AGCTCTCAAGTGAAAATTAA+TGG - chr6.3:33971886-33971905 MS.gene08038:intron 30.0%
AGTTCAGACTAAATGTTAAG+AGG + chr6.3:33973338-33973357 None:intergenic 30.0%
ATACAATGGTGAAATCTGAT+GGG + chr6.3:33971730-33971749 None:intergenic 30.0%
ATAGGCACATTAATAATGTG+GGG + chr6.3:33971328-33971347 None:intergenic 30.0%
ATGTGTTGTGTTGTAGATAT+GGG - chr6.3:33970432-33970451 MS.gene08038:intron 30.0%
ATTACCGCTATTCAAAATCT+CGG + chr6.3:33968873-33968892 None:intergenic 30.0%
ATTATTCATCTCCTGCTTAA+GGG - chr6.3:33972673-33972692 MS.gene08038:intron 30.0%
ATTTCAAAGCAGCTAAATTG+CGG - chr6.3:33969692-33969711 MS.gene08038:intron 30.0%
ATTTCCAATATCGCAATTTG+TGG - chr6.3:33969117-33969136 MS.gene08038:intron 30.0%
CAATTCTCCATAATATCGAA+GGG + chr6.3:33969384-33969403 None:intergenic 30.0%
CAATTGTCTCAACAAACTAT+TGG + chr6.3:33970956-33970975 None:intergenic 30.0%
CTCATATCTGATACAAAGAA+AGG + chr6.3:33974336-33974355 None:intergenic 30.0%
GAAAATGAAGTTTGTGGATT+AGG + chr6.3:33968426-33968445 None:intergenic 30.0%
GAATAACCTAACAAACGAAA+TGG - chr6.3:33971159-33971178 MS.gene08038:intron 30.0%
GACAAGTAAGAACTAAATAC+TGG + chr6.3:33971035-33971054 None:intergenic 30.0%
GACACTAAAGAAAAATGTCT+AGG + chr6.3:33972925-33972944 None:intergenic 30.0%
GACAGTAGTATTTAACATAG+GGG - chr6.3:33973470-33973489 MS.gene08038:intron 30.0%
GATTACCAAGATTCAAAATC+TGG + chr6.3:33968754-33968773 None:intergenic 30.0%
GCTTAATGAATATTGGAGAT+TGG - chr6.3:33969938-33969957 MS.gene08038:intron 30.0%
GGACAGTAGTATTTAACATA+GGG - chr6.3:33973469-33973488 MS.gene08038:intron 30.0%
GGTCTAATTATGTTCTATAC+AGG - chr6.3:33972694-33972713 MS.gene08038:intron 30.0%
GTTAGGTTATTCATCCAATT+TGG + chr6.3:33971151-33971170 None:intergenic 30.0%
GTTAGTATCAATCTAAGTGA+AGG + chr6.3:33972052-33972071 None:intergenic 30.0%
GTTATGTAATTGAACTGCTA+TGG - chr6.3:33972406-33972425 MS.gene08038:intron 30.0%
TAACACATTACATACTGTCA+AGG - chr6.3:33972133-33972152 MS.gene08038:intron 30.0%
TAAGACACAGTTTCAAACAA+CGG + chr6.3:33969324-33969343 None:intergenic 30.0%
TATAAATCACATGGCTTCTT+TGG - chr6.3:33973170-33973189 MS.gene08038:intron 30.0%
TATGTGTTGTGTTGTAGATA+TGG - chr6.3:33970431-33970450 MS.gene08038:intron 30.0%
TCATTCATAACCATTGTAAG+AGG + chr6.3:33971102-33971121 None:intergenic 30.0%
TGTCTCAATCTTCGATATTA+TGG - chr6.3:33969374-33969393 MS.gene08038:intron 30.0%
TGTTTGCATAAACTATCTCT+TGG - chr6.3:33973377-33973396 MS.gene08038:intron 30.0%
TTACAGATAAAAAGATAGCC+AGG + chr6.3:33973112-33973131 None:intergenic 30.0%
TTACTCAAAGTTATCGTTCT+TGG - chr6.3:33968384-33968403 MS.gene08038:CDS 30.0%
TTCTACATTTCCTCTTACAA+TGG - chr6.3:33971089-33971108 MS.gene08038:intron 30.0%
TTGTGGTTGAAAATTTGAGT+TGG - chr6.3:33968693-33968712 MS.gene08038:intron 30.0%
TTGTGTAGTAGATAGAGTAT+AGG - chr6.3:33973082-33973101 MS.gene08038:intron 30.0%
TTTCACAAGTAGTGAGAAAT+GGG + chr6.3:33973523-33973542 None:intergenic 30.0%
! AAAGAATGCCTTTTGCTTAT+GGG - chr6.3:33971460-33971479 MS.gene08038:intron 30.0%
! ATAGGTTGAAAATATCTGCA+AGG + chr6.3:33974410-33974429 None:intergenic 30.0%
! CAGATATTTTCAACCTATTC+CGG - chr6.3:33974412-33974431 MS.gene08038:intron 30.0%
! CATTTGATACACTTGATAAC+TGG - chr6.3:33970551-33970570 MS.gene08038:intron 30.0%
! CTACTTGTGAAAAAGTTGAT+TGG - chr6.3:33973531-33973550 MS.gene08038:intron 30.0%
! CTTGATTTTCTTCCTTCTTT+TGG - chr6.3:33973726-33973745 MS.gene08038:intron 30.0%
! GTGATTACGGATTTTAAACT+TGG - chr6.3:33970817-33970836 MS.gene08038:intron 30.0%
! TGATTTTCTTCCTTCTTTTG+GGG - chr6.3:33973728-33973747 MS.gene08038:intron 30.0%
! TGCTTCATTTGCATGATTTT+GGG - chr6.3:33968616-33968635 MS.gene08038:intron 30.0%
! TGTTTTCCATTTCGTTTGTT+AGG + chr6.3:33971168-33971187 None:intergenic 30.0%
! TTGCTTCATTTGCATGATTT+TGG - chr6.3:33968615-33968634 MS.gene08038:intron 30.0%
! TTTCAATTGGGATGCATTTT+TGG - chr6.3:33968654-33968673 MS.gene08038:intron 30.0%
! TTTTCACAAGTAGTGAGAAA+TGG + chr6.3:33973524-33973543 None:intergenic 30.0%
!! AACAAAGTTGATATTGATGG+CGG - chr6.3:33972610-33972629 MS.gene08038:intron 30.0%
!! GGAAACAAAGTTGATATTGA+TGG - chr6.3:33972607-33972626 MS.gene08038:intron 30.0%
!! GTTTTCATTTTTGTTAGGGT+TGG - chr6.3:33968487-33968506 MS.gene08038:intron 30.0%
!! TTGTTGTTATTTAGCAAGTC+TGG - chr6.3:33972261-33972280 MS.gene08038:CDS 30.0%
!!! ATCTTTTTTCCATCATTCAC+TGG - chr6.3:33971748-33971767 MS.gene08038:intron 30.0%
!!! TTGGTGTTGCATTTTATAGA+GGG - chr6.3:33970485-33970504 MS.gene08038:intron 30.0%
AAAGCCTAAGATGCAACAAT+AGG + chr6.3:33969801-33969820 None:intergenic 35.0%
AAATTTACGAGGATTTGCAC+AGG + chr6.3:33971912-33971931 None:intergenic 35.0%
AAATTTGACCTAGAGCTCTA+TGG - chr6.3:33971926-33971945 MS.gene08038:intron 35.0%
AACAGTGAAGGAAACCAAAT+TGG - chr6.3:33971134-33971153 MS.gene08038:intron 35.0%
AACGAAAAGTCAATGAGACT+AGG + chr6.3:33973754-33973773 None:intergenic 35.0%
AAGCCTAAGATGCAACAATA+GGG + chr6.3:33969800-33969819 None:intergenic 35.0%
AAGGATTTAAGAGGAAACTG+AGG - chr6.3:33973893-33973912 MS.gene08038:intron 35.0%
AATTCAAGGAAGACGAGAAA+AGG + chr6.3:33972290-33972309 None:intergenic 35.0%
ACAGAGTTGTAGTCATATTG+TGG - chr6.3:33969084-33969103 MS.gene08038:intron 35.0%
ACAGCTAATCTGAACTATCA+AGG + chr6.3:33972013-33972032 None:intergenic 35.0%
ACATAATTAGACCCTTAAGC+AGG + chr6.3:33972687-33972706 None:intergenic 35.0%
ACCAAAAATATCCATGATGC+AGG + chr6.3:33972334-33972353 None:intergenic 35.0%
AGAAAGGTGACAGTATAACA+TGG + chr6.3:33974320-33974339 None:intergenic 35.0%
AGTAACACTTATTTAGAGGG+GGG + chr6.3:33971274-33971293 None:intergenic 35.0%
ATACCCTATTGTTGCATCTT+AGG - chr6.3:33969794-33969813 MS.gene08038:intron 35.0%
ATTTCTCCATGATCGTAATC+GGG + chr6.3:33969266-33969285 None:intergenic 35.0%
CAAAAACTAGCAGCAAACTA+CGG + chr6.3:33972217-33972236 None:intergenic 35.0%
CAGCAATATAAAGCGACAAT+CGG - chr6.3:33970251-33970270 MS.gene08038:CDS 35.0%
CAGTAACACTTATTTAGAGG+GGG + chr6.3:33971275-33971294 None:intergenic 35.0%
CAGTTTCCTCTTAAATCCTT+AGG + chr6.3:33973893-33973912 None:intergenic 35.0%
CATCATTAACATTGAGGACA+AGG + chr6.3:33971375-33971394 None:intergenic 35.0%
CCTGTGACACAACATTAAAA+TGG + chr6.3:33972546-33972565 None:intergenic 35.0%
CTAAATCCAATAAGCTAGCA+TGG - chr6.3:33971396-33971415 MS.gene08038:intron 35.0%
CTCCATTTGACTACAATTCT+CGG + chr6.3:33969589-33969608 None:intergenic 35.0%
GACAAACCATTACCACAATT+CGG + chr6.3:33969358-33969377 None:intergenic 35.0%
GAGAGTGGAATTTATGATTG+TGG - chr6.3:33968676-33968695 MS.gene08038:intron 35.0%
GATACAATGGTGAAATCTGA+TGG + chr6.3:33971731-33971750 None:intergenic 35.0%
GCCAGATTCTATATAAACCA+AGG - chr6.3:33971846-33971865 MS.gene08038:intron 35.0%
GCCTTGGTTTATATAGAATC+TGG + chr6.3:33971850-33971869 None:intergenic 35.0%
GGGACAGTAGTATTTAACAT+AGG - chr6.3:33973468-33973487 MS.gene08038:intron 35.0%
GGTTTCTGATAAGAAAGCAA+AGG - chr6.3:33972715-33972734 MS.gene08038:intron 35.0%
GTCACCGAAAAATAAGAGTA+GGG - chr6.3:33973844-33973863 MS.gene08038:intron 35.0%
GTGTCTATGATAGGACATTA+TGG - chr6.3:33972940-33972959 MS.gene08038:intron 35.0%
GTTGCTATAAAGCAAAACCA+TGG + chr6.3:33970929-33970948 None:intergenic 35.0%
TAATATAGCCATAGAGCTCT+AGG + chr6.3:33971937-33971956 None:intergenic 35.0%
TACTACACAACACTACTAAC+TGG + chr6.3:33973072-33973091 None:intergenic 35.0%
TAGGCACATTAATAATGTGG+GGG + chr6.3:33971327-33971346 None:intergenic 35.0%
TATGTCATAACTCATGACCA+TGG - chr6.3:33970909-33970928 MS.gene08038:intron 35.0%
TCAACTACCCTTCGATATTA+TGG - chr6.3:33969423-33969442 MS.gene08038:intron 35.0%
TCATGCAGAGAATGGAAAAA+GGG + chr6.3:33971790-33971809 None:intergenic 35.0%
TCTATGATAGGACATTATGG+TGG - chr6.3:33972943-33972962 MS.gene08038:intron 35.0%
TGAAGCTGGTAGTTAACATA+GGG - chr6.3:33973554-33973573 MS.gene08038:intron 35.0%
TGTCACCGAAAAATAAGAGT+AGG - chr6.3:33973843-33973862 MS.gene08038:intron 35.0%
TTAAATACTACTGTCCCAAG+CGG + chr6.3:33973465-33973484 None:intergenic 35.0%
TTTCGAATATCGGCATATGT+GGG - chr6.3:33970187-33970206 MS.gene08038:intron 35.0%
TTTGCAGATGTCTCAAAGTA+AGG + chr6.3:33972767-33972786 None:intergenic 35.0%
! AAAAAGTTGATTGGTGAAGC+TGG - chr6.3:33973540-33973559 MS.gene08038:intron 35.0%
! ACCTGCATCATGGATATTTT+TGG - chr6.3:33972330-33972349 MS.gene08038:CDS 35.0%
! ACTCTAAAGAATCTGGATCA+TGG - chr6.3:33969535-33969554 MS.gene08038:intron 35.0%
! AGACCAAGTTTTCTCATTGT+TGG - chr6.3:33971663-33971682 MS.gene08038:intron 35.0%
! CAAAGAATGCCTTTTGCTTA+TGG - chr6.3:33971459-33971478 MS.gene08038:intron 35.0%
! CAGATTAGCTGTTTGTACAT+TGG - chr6.3:33972021-33972040 MS.gene08038:intron 35.0%
! GAATCTTGGTAATCTTATCG+TGG - chr6.3:33968760-33968779 MS.gene08038:intron 35.0%
! GAGATTTTGTAATCGTATCG+TGG - chr6.3:33968990-33969009 MS.gene08038:intron 35.0%
! GTAGAGGATTAGTGTGATTA+CGG - chr6.3:33970804-33970823 MS.gene08038:intron 35.0%
! GTATGTCACTCTAAAGAATC+TGG - chr6.3:33969528-33969547 MS.gene08038:intron 35.0%
! TTTCTCTCTAGCATTGAATG+TGG - chr6.3:33970042-33970061 MS.gene08038:CDS 35.0%
! TTTTCGAATATCGGCATATG+TGG - chr6.3:33970186-33970205 MS.gene08038:intron 35.0%
!! ACAAAGTTGATATTGATGGC+GGG - chr6.3:33972611-33972630 MS.gene08038:intron 35.0%
!! CATAAGCAAAAGGCATTCTT+TGG + chr6.3:33971461-33971480 None:intergenic 35.0%
!! CCATTTTAATGTTGTGTCAC+AGG - chr6.3:33972543-33972562 MS.gene08038:CDS 35.0%
!! GAAAAGTGCTTGGATTAGAA+GGG + chr6.3:33972573-33972592 None:intergenic 35.0%
!! TGCATGATTTTGGGTATTAG+TGG - chr6.3:33968625-33968644 MS.gene08038:intron 35.0%
!! TTACTTTGAGACATCTGCAA+AGG - chr6.3:33972766-33972785 MS.gene08038:intron 35.0%
!! TTGTTGGGGGAAGTATTTAT+AGG + chr6.3:33971346-33971365 None:intergenic 35.0%
!!! CTTGGTGTTGCATTTTATAG+AGG - chr6.3:33970484-33970503 MS.gene08038:intron 35.0%
!!! GAGTAGGGTTTTAGAATGAA+AGG - chr6.3:33973859-33973878 MS.gene08038:intron 35.0%
!!! GGTTTTAGAATGAAAGGAAG+AGG - chr6.3:33973865-33973884 MS.gene08038:intron 35.0%
!!! GTAGTTTGCTGCTAGTTTTT+GGG - chr6.3:33972216-33972235 MS.gene08038:intron 35.0%
!!! TGGTGTTGCATTTTATAGAG+GGG - chr6.3:33970486-33970505 MS.gene08038:intron 35.0%
!!! TTTCTCATTGTTGGTGGTTT+TGG - chr6.3:33971672-33971691 MS.gene08038:intron 35.0%
AAAGCTGCCAGTTAACATAG+GGG - chr6.3:33973435-33973454 MS.gene08038:intron 40.0%
AAGAATCTGGATCATGGCAA+TGG - chr6.3:33969541-33969560 MS.gene08038:intron 40.0%
AAGAGGAAACTGAGGTCTTA+TGG - chr6.3:33973901-33973920 MS.gene08038:intron 40.0%
AAGCAGCTAAATTGCGGTAA+TGG - chr6.3:33969698-33969717 MS.gene08038:intron 40.0%
ACAAAGCTGCCAGTTAACAT+AGG - chr6.3:33973433-33973452 MS.gene08038:intron 40.0%
ACCAACTAACCTAACTGAAG+GGG + chr6.3:33973797-33973816 None:intergenic 40.0%
ACTTCATTTCATGGACAGCT+TGG - chr6.3:33971585-33971604 MS.gene08038:intron 40.0%
AGCAGCTAAATTGCGGTAAT+GGG - chr6.3:33969699-33969718 MS.gene08038:intron 40.0%
AGGCACATTAATAATGTGGG+GGG + chr6.3:33971326-33971345 None:intergenic 40.0%
AGTCACGAAACTCTGTTTAG+TGG - chr6.3:33969194-33969213 MS.gene08038:intron 40.0%
ATCATCGGAGAAAACAGTGA+AGG - chr6.3:33971122-33971141 MS.gene08038:intron 40.0%
ATGTGGTTGGGCACAAAATT+AGG - chr6.3:33970059-33970078 MS.gene08038:CDS 40.0%
CAAAGCTGCCAGTTAACATA+GGG - chr6.3:33973434-33973453 MS.gene08038:intron 40.0%
CAATCTGAGCTGCAACATTA+TGG + chr6.3:33969642-33969661 None:intergenic 40.0%
CACAAACTTCAACATCAGGT+GGG + chr6.3:33972463-33972482 None:intergenic 40.0%
CAGAGTCCATATCAAACAGT+GGG + chr6.3:33971423-33971442 None:intergenic 40.0%
CAGATAAAAAGATAGCCAGG+AGG + chr6.3:33973109-33973128 None:intergenic 40.0%
CAGCTACATAAAGCCATAAC+TGG + chr6.3:33973500-33973519 None:intergenic 40.0%
CAGGAGAGATTTCAAAGTCT+TGG - chr6.3:33970466-33970485 MS.gene08038:intron 40.0%
CCACCAACAATGAGAAAACT+TGG + chr6.3:33971669-33971688 None:intergenic 40.0%
CCACTTGTAGAGTAACTAGT+CGG + chr6.3:33970313-33970332 None:intergenic 40.0%
CCTCATTTCTTCATGTGTAG+AGG - chr6.3:33970788-33970807 MS.gene08038:intron 40.0%
CCTCTACACATGAAGAAATG+AGG + chr6.3:33970791-33970810 None:intergenic 40.0%
CTGATAAGAAAGCAAAGGAG+TGG - chr6.3:33972720-33972739 MS.gene08038:intron 40.0%
CTTCATTTCATGGACAGCTT+GGG - chr6.3:33971586-33971605 MS.gene08038:intron 40.0%
GAAGAGTTGTTGTCGTATTG+TGG - chr6.3:33969037-33969056 MS.gene08038:intron 40.0%
GAAGCTGGTAGTTAACATAG+GGG - chr6.3:33973555-33973574 MS.gene08038:intron 40.0%
GAATAGCGGTAATCTTATCG+TGG - chr6.3:33968880-33968899 MS.gene08038:intron 40.0%
GACAACAACTCTTCGCAATA+AGG + chr6.3:33969031-33969050 None:intergenic 40.0%
GACCAACTAACCTAACTGAA+GGG + chr6.3:33973798-33973817 None:intergenic 40.0%
GAGACCACAAATTGCGATAT+TGG + chr6.3:33969124-33969143 None:intergenic 40.0%
GAGGATAAAACGTAATGTGG+GGG + chr6.3:33971304-33971323 None:intergenic 40.0%
GAGTAAAGTTCTTCTGCGTA+AGG + chr6.3:33968370-33968389 None:intergenic 40.0%
GAGTTAGTTAAAGTGAGTGC+AGG + chr6.3:33972074-33972093 None:intergenic 40.0%
GAGTTATGCAATTCCTGAGT+GGG + chr6.3:33971239-33971258 None:intergenic 40.0%
GGAAAAAGGGAAGCTAACTA+AGG + chr6.3:33971777-33971796 None:intergenic 40.0%
GGAGGATAAAACGTAATGTG+GGG + chr6.3:33971305-33971324 None:intergenic 40.0%
GGGAGGATAAAACGTAATGT+GGG + chr6.3:33971306-33971325 None:intergenic 40.0%
GTAAACGAGAACACAGCAAT+CGG + chr6.3:33970512-33970531 None:intergenic 40.0%
GTACAGTTTAGCATAGAGTC+AGG + chr6.3:33971546-33971565 None:intergenic 40.0%
GTCATCGATCTGCAATTCTT+TGG + chr6.3:33970291-33970310 None:intergenic 40.0%
GTCATGCAGAGAATGGAAAA+AGG + chr6.3:33971791-33971810 None:intergenic 40.0%
GTGAAGCTGGTAGTTAACAT+AGG - chr6.3:33973553-33973572 MS.gene08038:intron 40.0%
GTTTCTCTGTATTATGCTGC+TGG + chr6.3:33971506-33971525 None:intergenic 40.0%
TAAATACTACTGTCCCAAGC+GGG + chr6.3:33973464-33973483 None:intergenic 40.0%
TCCAACCAAATTGTACGTAG+AGG + chr6.3:33971615-33971634 None:intergenic 40.0%
TCCTCTACGTACAATTTGGT+TGG - chr6.3:33971611-33971630 MS.gene08038:intron 40.0%
TGACCAACTAACCTAACTGA+AGG + chr6.3:33973799-33973818 None:intergenic 40.0%
TGCCGAGAATTGTAGTCAAA+TGG - chr6.3:33969584-33969603 MS.gene08038:intron 40.0%
TGTAATGTGTTACAAGGCAC+TGG + chr6.3:33972125-33972144 None:intergenic 40.0%
TGTGGTTGGGCACAAAATTA+GGG - chr6.3:33970060-33970079 MS.gene08038:CDS 40.0%
TTATCGTTCTTGGAGACAGT+GGG - chr6.3:33968394-33968413 MS.gene08038:CDS 40.0%
TTTCTAAGCAACTGCAACTG+AGG + chr6.3:33969612-33969631 None:intergenic 40.0%
TTTCTCCATGATCGTAATCG+GGG + chr6.3:33969265-33969284 None:intergenic 40.0%
! AGAGGAAACTGAGGTCTTAT+GGG - chr6.3:33973902-33973921 MS.gene08038:intron 40.0%
! AGGACAAGGTGAAACTTGTT+GGG + chr6.3:33971361-33971380 None:intergenic 40.0%
! CCAAGTTTTCTCATTGTTGG+TGG - chr6.3:33971666-33971685 MS.gene08038:intron 40.0%
! CGACTAGTTACTCTACAAGT+GGG - chr6.3:33970311-33970330 MS.gene08038:intron 40.0%
! CTCTAGCATTGAATGTGGTT+GGG - chr6.3:33970047-33970066 MS.gene08038:CDS 40.0%
! GTAAGGAATGTTCCCTTTTG+AGG + chr6.3:33972750-33972769 None:intergenic 40.0%
! TCTCTAGCATTGAATGTGGT+TGG - chr6.3:33970046-33970065 MS.gene08038:CDS 40.0%
!! AAGAAGCACTTCAGAGTGAA+TGG - chr6.3:33973599-33973618 MS.gene08038:intron 40.0%
!! AGCTCTAGGTCAAATTTACG+AGG + chr6.3:33971923-33971942 None:intergenic 40.0%
!! AGCTGCTTTGAAATGAGACA+CGG + chr6.3:33969686-33969705 None:intergenic 40.0%
!! GGAAAAGTGCTTGGATTAGA+AGG + chr6.3:33972574-33972593 None:intergenic 40.0%
!!! CGTAGTTTGCTGCTAGTTTT+TGG - chr6.3:33972215-33972234 MS.gene08038:intron 40.0%
AAACCCTAATGTCGTAGCGT+AGG - chr6.3:33969167-33969186 MS.gene08038:intron 45.0%
ACAGTGATGAACCACAGAGA+AGG - chr6.3:33971185-33971204 MS.gene08038:intron 45.0%
ACATCCTACGCTACGACATT+AGG + chr6.3:33969174-33969193 None:intergenic 45.0%
ACTGTCAAGGCTTTACTGAC+TGG - chr6.3:33972146-33972165 MS.gene08038:intron 45.0%
ACTTCAGAGTAGCCGAATTG+TGG - chr6.3:33969343-33969362 MS.gene08038:intron 45.0%
AGAAGCTGTCATGCAGAGAA+TGG + chr6.3:33971798-33971817 None:intergenic 45.0%
AGATAGAGTATAGGACCTCC+TGG - chr6.3:33973091-33973110 MS.gene08038:intron 45.0%
ATAGAGTCAGGATGCTGGAA+AGG + chr6.3:33971534-33971553 None:intergenic 45.0%
ATTGAGCCGTTATGGGATTG+CGG - chr6.3:33973978-33973997 MS.gene08038:intron 45.0%
CAAACCTCAAACGCACTCAA+AGG + chr6.3:33970716-33970735 None:intergenic 45.0%
CACATTAATAATGTGGGGGG+AGG + chr6.3:33971323-33971342 None:intergenic 45.0%
CAGTGATGAACCACAGAGAA+GGG - chr6.3:33971186-33971205 MS.gene08038:intron 45.0%
CATCCTACGCTACGACATTA+GGG + chr6.3:33969173-33969192 None:intergenic 45.0%
CATGGTCCCACTGTTTGATA+TGG - chr6.3:33971414-33971433 MS.gene08038:intron 45.0%
CATGTCTTGCTCACGTTCAT+TGG + chr6.3:33972843-33972862 None:intergenic 45.0%
CCAAATATCCCCCTTCAGTT+AGG - chr6.3:33973785-33973804 MS.gene08038:intron 45.0%
CCAACTAACCTAACTGAAGG+GGG + chr6.3:33973796-33973815 None:intergenic 45.0%
CCACAAACTTCAACATCAGG+TGG + chr6.3:33972464-33972483 None:intergenic 45.0%
CCACCTGATGTTGAAGTTTG+TGG - chr6.3:33972461-33972480 MS.gene08038:intron 45.0%
CCTAACTGAAGGGGGATATT+TGG + chr6.3:33973788-33973807 None:intergenic 45.0%
CTAAGGCAACCAGTGAATGA+TGG + chr6.3:33971760-33971779 None:intergenic 45.0%
CTCCTCTTGGATGGTAATAC+AGG + chr6.3:33971063-33971082 None:intergenic 45.0%
CTGTATTACCATCCAAGAGG+AGG - chr6.3:33971061-33971080 MS.gene08038:intron 45.0%
GACCCTGTTCCAAAGCAAAT+GGG + chr6.3:33971698-33971717 None:intergenic 45.0%
GACCTGTATTACCATCCAAG+AGG - chr6.3:33971058-33971077 MS.gene08038:intron 45.0%
GAGGACAAGGTGAAACTTGT+TGG + chr6.3:33971362-33971381 None:intergenic 45.0%
GAGTAGCCGAATTGTGGTAA+TGG - chr6.3:33969349-33969368 MS.gene08038:intron 45.0%
GATTACAAAATCTCGGCGAG+AGG + chr6.3:33968984-33969003 None:intergenic 45.0%
GATTCCTTTGAGTGCGTTTG+AGG - chr6.3:33970709-33970728 MS.gene08038:intron 45.0%
GCAGAGTCCATATCAAACAG+TGG + chr6.3:33971424-33971443 None:intergenic 45.0%
GCTCCACAAACTTCAACATC+AGG + chr6.3:33972467-33972486 None:intergenic 45.0%
GGAGTTATGCAATTCCTGAG+TGG + chr6.3:33971240-33971259 None:intergenic 45.0%
GGCTTCCTCTACGTACAATT+TGG - chr6.3:33971607-33971626 MS.gene08038:intron 45.0%
GGGGAGGATAAAACGTAATG+TGG + chr6.3:33971307-33971326 None:intergenic 45.0%
GTGCAGACACTCAGAAATCT+CGG - chr6.3:33973928-33973947 MS.gene08038:intron 45.0%
GTTATCGTTCTTGGAGACAG+TGG - chr6.3:33968393-33968412 MS.gene08038:CDS 45.0%
TCTGTATTATGCTGCTGGAC+AGG + chr6.3:33971501-33971520 None:intergenic 45.0%
TGCGGTTTCAATCAATGTCG+TGG - chr6.3:33969761-33969780 MS.gene08038:intron 45.0%
TGGAGATTGGTAGGTAGATG+TGG - chr6.3:33969951-33969970 MS.gene08038:intron 45.0%
TGTAGAACCAATCCTCCTCT+TGG + chr6.3:33971076-33971095 None:intergenic 45.0%
TGTAGATATGGGACACTGCA+GGG - chr6.3:33970443-33970462 MS.gene08038:intron 45.0%
TGTTCCAGAGAATGAGCAGA+GGG - chr6.3:33974442-33974461 MS.gene08038:CDS 45.0%
TTACCATCCAAGAGGAGGAT+TGG - chr6.3:33971066-33971085 MS.gene08038:intron 45.0%
TTAGCATAGAGTCAGGATGC+TGG + chr6.3:33971539-33971558 None:intergenic 45.0%
TTCTTCCTACTGTCCCAAGT+GGG + chr6.3:33973584-33973603 None:intergenic 45.0%
TTGTAGATATGGGACACTGC+AGG - chr6.3:33970442-33970461 MS.gene08038:intron 45.0%
TTGTTCCAGAGAATGAGCAG+AGG - chr6.3:33974441-33974460 MS.gene08038:CDS 45.0%
! AATGCCTTTTGCTTATGGGC+TGG - chr6.3:33971464-33971483 MS.gene08038:intron 45.0%
! CAATTCCTGAGTGGGTTTCT+GGG + chr6.3:33971231-33971250 None:intergenic 45.0%
! CCGACTAGTTACTCTACAAG+TGG - chr6.3:33970310-33970329 MS.gene08038:intron 45.0%
! CTCACGTTCATTGGCTAATG+CGG + chr6.3:33972834-33972853 None:intergenic 45.0%
! CTCGCCCAGATTTTGAATCT+TGG - chr6.3:33968746-33968765 MS.gene08038:intron 45.0%
! CTCGCCGAGATTTTGAATAG+CGG - chr6.3:33968866-33968885 MS.gene08038:intron 45.0%
! GAAACCCTGTTCGGTGATAT+AGG + chr6.3:33972174-33972193 None:intergenic 45.0%
! GAAACTGAGGTCTTATGGGA+TGG - chr6.3:33973906-33973925 MS.gene08038:intron 45.0%
! GAAATCTGATGGGTACCAAC+TGG + chr6.3:33971720-33971739 None:intergenic 45.0%
! GAGGTGCCTAAGGATTTAAG+AGG - chr6.3:33973884-33973903 MS.gene08038:intron 45.0%
! TACACTTGATAACTGGCACG+AGG - chr6.3:33970558-33970577 MS.gene08038:intron 45.0%
! TGAAGGGGGATATTTGGAGT+TGG + chr6.3:33973782-33973801 None:intergenic 45.0%
! TTCATTGGCTAATGCGGTCT+TGG + chr6.3:33972828-33972847 None:intergenic 45.0%
!! AGGCACTGGTTAGTTTCTGA+CGG + chr6.3:33972111-33972130 None:intergenic 45.0%
!! ATGAAAGGAAGAGGTGCCTA+AGG - chr6.3:33973874-33973893 MS.gene08038:intron 45.0%
!! CAAAGCACTGAAACCCTGTT+CGG + chr6.3:33972183-33972202 None:intergenic 45.0%
!! GACAAGGTGAAACTTGTTGG+GGG + chr6.3:33971359-33971378 None:intergenic 45.0%
!! GGACAAGGTGAAACTTGTTG+GGG + chr6.3:33971360-33971379 None:intergenic 45.0%
!! GGTTTCTGGGTTCTAGAGTA+AGG + chr6.3:33971218-33971237 None:intergenic 45.0%
!! TGCTCATTCTCTGGAACAAC+AGG + chr6.3:33974440-33974459 None:intergenic 45.0%
!! TGGGATGCATTTTTGGAGAG+TGG - chr6.3:33968661-33968680 MS.gene08038:intron 45.0%
!!! TGGTTTTGGCCCATTTGCTT+TGG - chr6.3:33971686-33971705 MS.gene08038:intron 45.0%
!!! ATTAAATTTAAAATAATAGA+GGG - chr6.3:33969881-33969900 MS.gene08038:intron 5.0%
AACATAGGGGACTCCCACTT+GGG - chr6.3:33973568-33973587 MS.gene08038:intron 50.0%
AAGGAGTGGTGTGCCTCAAA+AGG - chr6.3:33972734-33972753 MS.gene08038:intron 50.0%
AAGGAGTTGACCCTTCTCTG+TGG + chr6.3:33971199-33971218 None:intergenic 50.0%
AGAGCTTGTGCAGAGAGCAA+GGG + chr6.3:33971872-33971891 None:intergenic 50.0%
AGATCAGTTACTGGCCACCA+TGG - chr6.3:33974004-33974023 MS.gene08038:intron 50.0%
AGGAGTGGTGTGCCTCAAAA+GGG - chr6.3:33972735-33972754 MS.gene08038:intron 50.0%
ATGCGGTCTTGGCAATACGT+AGG + chr6.3:33972817-33972836 None:intergenic 50.0%
CATCCTGCTACATGTCATCC+CGG - chr6.3:33974199-33974218 MS.gene08038:intron 50.0%
CCCCCTTCAGTTAGGTTAGT+TGG - chr6.3:33973793-33973812 MS.gene08038:intron 50.0%
CCCTTCAGCCACTAGCAAAA+CGG + chr6.3:33971827-33971846 None:intergenic 50.0%
CTTCTCCCACTAAGTGGAGT+CGG + chr6.3:33972992-33973011 None:intergenic 50.0%
CTTCTTCCTACTGTCCCAAG+TGG + chr6.3:33973585-33973604 None:intergenic 50.0%
GAACCAATCCTCCTCTTGGA+TGG + chr6.3:33971072-33971091 None:intergenic 50.0%
GGACCCTGTTCCAAAGCAAA+TGG + chr6.3:33971699-33971718 None:intergenic 50.0%
GGTGCCTATATCACCGAACA+GGG - chr6.3:33972167-33972186 MS.gene08038:intron 50.0%
GTTCCAGAGAATGAGCAGAG+GGG - chr6.3:33974443-33974462 MS.gene08038:CDS 50.0%
GTTGTCAATCCCAGACAACC+CGG + chr6.3:33974232-33974251 None:intergenic 50.0%
TAACATAGGGGACTCCCACT+TGG - chr6.3:33973567-33973586 MS.gene08038:intron 50.0%
TAGAACCCAGAAACCCACTC+AGG - chr6.3:33971223-33971242 MS.gene08038:intron 50.0%
TCCTTTGGGCAAGAAGACTC+AGG + chr6.3:33973203-33973222 None:intergenic 50.0%
TCTGCATGACAGCTTCTACC+CGG - chr6.3:33971801-33971820 MS.gene08038:intron 50.0%
TCTGTGCCGCAATCCCATAA+CGG + chr6.3:33973987-33974006 None:intergenic 50.0%
TGAGACTAGGCCCCAAAAGA+AGG + chr6.3:33973741-33973760 None:intergenic 50.0%
TGCTGCGATTGAGCCGTTAT+GGG - chr6.3:33973971-33973990 MS.gene08038:intron 50.0%
TGGTCCAGCCCATAAGCAAA+AGG + chr6.3:33971471-33971490 None:intergenic 50.0%
TGGTCTCGAGTGCAATCTCT+GGG - chr6.3:33969137-33969156 MS.gene08038:intron 50.0%
TGGTGCCTATATCACCGAAC+AGG - chr6.3:33972166-33972185 MS.gene08038:intron 50.0%
TTAGAGGGGGGCAACGAATT+GGG + chr6.3:33971262-33971281 None:intergenic 50.0%
TTGCGGCACAGATCAGTTAC+TGG - chr6.3:33973995-33974014 MS.gene08038:intron 50.0%
TTTAGAGGGGGGCAACGAAT+TGG + chr6.3:33971263-33971282 None:intergenic 50.0%
! CCGTTTTGCTAGTGGCTGAA+GGG - chr6.3:33971824-33971843 MS.gene08038:intron 50.0%
! GCAATTCCTGAGTGGGTTTC+TGG + chr6.3:33971232-33971251 None:intergenic 50.0%
! GCTGCTGGACAGGAAGATTT+TGG + chr6.3:33971491-33971510 None:intergenic 50.0%
! GTGGGACCATGCTAGCTTAT+TGG + chr6.3:33971405-33971424 None:intergenic 50.0%
! TGTAGCCGACTCCACTTAGT+GGG - chr6.3:33972984-33973003 MS.gene08038:intron 50.0%
! TTGTAGCCGACTCCACTTAG+TGG - chr6.3:33972983-33973002 MS.gene08038:intron 50.0%
!! ATTGCGGTAATGGGTCATCG+TGG - chr6.3:33969708-33969727 MS.gene08038:intron 50.0%
!! GCACGAGGAGTTTCTGAAAC+AGG - chr6.3:33970573-33970592 MS.gene08038:intron 50.0%
!! GGCCCATTTGCTTTGGAACA+GGG - chr6.3:33971693-33971712 MS.gene08038:intron 50.0%
!! TGGCCCATTTGCTTTGGAAC+AGG - chr6.3:33971692-33971711 MS.gene08038:intron 50.0%
!! TTCTCTGGAACAACAGGCTC+CGG + chr6.3:33974434-33974453 None:intergenic 50.0%
AACATAGGGGACTCCCGCTT+GGG - chr6.3:33973448-33973467 MS.gene08038:intron 55.0%
ACATAGGGGGCTGCCAGTTA+TGG - chr6.3:33973484-33973503 MS.gene08038:intron 55.0%
ATGTCATCCCGGCTGTTGTC+CGG - chr6.3:33974210-33974229 MS.gene08038:intron 55.0%
CCAAGCCTTCTCCCACTAAG+TGG + chr6.3:33972998-33973017 None:intergenic 55.0%
CCACTTAGTGGGAGAAGGCT+TGG - chr6.3:33972995-33973014 MS.gene08038:intron 55.0%
CGACTCCACTTAGTGGGAGA+AGG - chr6.3:33972990-33973009 MS.gene08038:intron 55.0%
CGGGAGTCCCCTATGTTAAC+TGG + chr6.3:33973445-33973464 None:intergenic 55.0%
CGGGATGACATGTAGCAGGA+TGG + chr6.3:33974201-33974220 None:intergenic 55.0%
GAGAGCTTGTGCAGAGAGCA+AGG + chr6.3:33971873-33971892 None:intergenic 55.0%
GCCTGAGTCTTCTTGCCCAA+AGG - chr6.3:33973199-33973218 MS.gene08038:intron 55.0%
GGAACAACAGGCTCCGGAAT+AGG + chr6.3:33974428-33974447 None:intergenic 55.0%
GGAGTCGGCTACAAGCTACA+TGG + chr6.3:33972977-33972996 None:intergenic 55.0%
GGCAAGGACGTCATGCATGA+AGG - chr6.3:33974030-33974049 MS.gene08038:intron 55.0%
GTGCTGCGATTGAGCCGTTA+TGG - chr6.3:33973970-33973989 MS.gene08038:intron 55.0%
GTGGTCTCGAGTGCAATCTC+TGG - chr6.3:33969136-33969155 MS.gene08038:intron 55.0%
TAACATAGGGGACTCCCGCT+TGG - chr6.3:33973447-33973466 MS.gene08038:intron 55.0%
TACGGCCCCGATTACGATCA+TGG - chr6.3:33969257-33969276 MS.gene08038:intron 55.0%
TAGAGGGGGGCAACGAATTG+GGG + chr6.3:33971261-33971280 None:intergenic 55.0%
TCAGCCACTAGCAAAACGGC+CGG + chr6.3:33971823-33971842 None:intergenic 55.0%
! GACGTCATGCATGAAGGTGC+AGG - chr6.3:33974036-33974055 MS.gene08038:intron 55.0%
!! GCCGTTTTGCTAGTGGCTGA+AGG - chr6.3:33971823-33971842 MS.gene08038:intron 55.0%
!! GCTTTGGAACAGGGTCCAGT+TGG - chr6.3:33971702-33971721 MS.gene08038:intron 55.0%
!! TGATGGCGGGAATAGTCGAG+TGG - chr6.3:33972624-33972643 MS.gene08038:intron 55.0%
AGACAACCCGGACAACAGCC+GGG + chr6.3:33974220-33974239 None:intergenic 60.0%
AGTTACTGGCCACCATGGCG+AGG - chr6.3:33974009-33974028 MS.gene08038:intron 60.0%
ATGACGTCCTTGCCTCGCCA+TGG + chr6.3:33974024-33974043 None:intergenic 60.0%
CAGACAACCCGGACAACAGC+CGG + chr6.3:33974221-33974240 None:intergenic 60.0%
CAGCCACTAGCAAAACGGCC+GGG + chr6.3:33971822-33971841 None:intergenic 60.0%
CAGCCGGGATGACATGTAGC+AGG + chr6.3:33974205-33974224 None:intergenic 60.0%
CCACCCCTCTGCTCATTCTC+TGG + chr6.3:33974449-33974468 None:intergenic 60.0%
CCAGAGAATGAGCAGAGGGG+TGG - chr6.3:33974446-33974465 MS.gene08038:CDS 60.0%
GATATGGGACACTGCAGGGC+AGG - chr6.3:33970447-33970466 MS.gene08038:intron 60.0%
GGACTCCCACTTGGGACAGT+AGG - chr6.3:33973576-33973595 MS.gene08038:intron 60.0%
GGCGGGAATAGTCGAGTGGT+AGG - chr6.3:33972628-33972647 MS.gene08038:intron 60.0%
GGCTGTTGTCCGGGTTGTCT+GGG - chr6.3:33974220-33974239 MS.gene08038:intron 60.0%
TGTCATCCCGGCTGTTGTCC+GGG - chr6.3:33974211-33974230 MS.gene08038:intron 60.0%
TGTGCAGAGAGCAAGGGCCT+TGG + chr6.3:33971866-33971885 None:intergenic 60.0%
!! CTACCCGGCCGTTTTGCTAG+TGG - chr6.3:33971816-33971835 MS.gene08038:intron 60.0%
ACGTCCTTGCCTCGCCATGG+TGG + chr6.3:33974021-33974040 None:intergenic 65.0%
CGGCTGTTGTCCGGGTTGTC+TGG - chr6.3:33974219-33974238 MS.gene08038:intron 65.0%
CTGGCCACCATGGCGAGGCA+AGG - chr6.3:33974014-33974033 MS.gene08038:intron 70.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 33968363 33974481 33968363 ID=MS.gene08038
chr6.3 mRNA 33968363 33974481 33968363 ID=MS.gene08038.t1;Parent=MS.gene08038
chr6.3 exon 33974429 33974481 33974429 ID=MS.gene08038.t1.exon1;Parent=MS.gene08038.t1
chr6.3 CDS 33974429 33974481 33974429 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33974314 33974340 33974314 ID=MS.gene08038.t1.exon2;Parent=MS.gene08038.t1
chr6.3 CDS 33974314 33974340 33974314 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33972516 33972615 33972516 ID=MS.gene08038.t1.exon3;Parent=MS.gene08038.t1
chr6.3 CDS 33972516 33972615 33972516 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33972250 33972396 33972250 ID=MS.gene08038.t1.exon4;Parent=MS.gene08038.t1
chr6.3 CDS 33972250 33972396 33972250 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33970199 33970279 33970199 ID=MS.gene08038.t1.exon5;Parent=MS.gene08038.t1
chr6.3 CDS 33970199 33970279 33970199 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33969983 33970128 33969983 ID=MS.gene08038.t1.exon6;Parent=MS.gene08038.t1
chr6.3 CDS 33969983 33970128 33969983 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
chr6.3 exon 33968363 33968429 33968363 ID=MS.gene08038.t1.exon7;Parent=MS.gene08038.t1
chr6.3 CDS 33968363 33968429 33968363 ID=cds.MS.gene08038.t1;Parent=MS.gene08038.t1
Gene Sequence

>MS.gene08038

ATGGCCTTACGCAGAAGAACTTTACTCAAAGTTATCGTTCTTGGAGACAGTGGGTACGTTCCTAATCCACAAACTTCATTTTCAGTTTTTTTTTTTTTTTTTACTTTTTCTCTAACGTGATTTTGTTTTCATTTTTGTTAGGGTTGGAAAAACTTCGTTGATGAATCAGTATCCTTTGCAATTTTCTGATTTGCTAATTTGATAAAAAAATTATTTATTTTTTATTATTATTACTCATTTGATTTTAGTTTATTGCTTCATTTGCATGATTTTGGGTATTAGTGGTGTTTATTTCAATTGGGATGCATTTTTGGAGAGTGGAATTTATGATTGTGGTTGAAAATTTGAGTTGGATTTAATTTTTACTATGTTCGAATGCACTTCTCGCCCAGATTTTGAATCTTGGTAATCTTATCGTGGTTTTATCGCGATTTTCCATTTTTTTTTTTGTTGTGGTTGAGAATTTGAGTTGAATTTAATTTTTAATATTTTCAAATGCAACTCTCGCCGAGATTTTGAATAGCGGTAATCTTATCGTGGTTTGATAGCGATTTTCTATATTTTTTTATTGTGGTTGAGAATTTGTGTTTAATTTAATTTTTACTATTTTCGAATGCACCTCTCGCCGAGATTTTGTAATCGTATCGTGGTTTTATCGTGATTTTCCTTATTGCGAAGAGTTGTTGTCGTATTGTGGTTTTATCACGATTTTCAATATCGCACAGAGTTGTAGTCATATTGTGGTTTTATCGCGATTTCCAATATCGCAATTTGTGGTCTCGAGTGCAATCTCTGGGAAATCGAAAACCCTAATGTCGTAGCGTAGGATGTAGTCACGAAACTCTGTTTAGTGGTTCATCGCGATTTTTGATATTGATTAGAATTGGGGTAAAATACGGCCCCGATTACGATCATGGAGAAATTGAGAACTTTAATGTTGTAGTTTAGATCTTGTGCACCGTTGTTTGAAACTGTGTCTTACTTCAGAGTAGCCGAATTGTGGTAATGGTTTGTCTCAATCTTCGATATTATGGAGAATTGTGTTTAAATCGCAGAGAAATCAACTACCCTTCGATATTATGGAGAATTGTGTTTAAATCGCAGAGAAATCAACTACCCTAATGTTGTATGTACTATGTAGTTTCAGACCTTTATTTAAAACTATGTATGTCACTCTAAAGAATCTGGATCATGGCAATGGTTCGTCGCGATCTTTGATATTGCCGAGAATTGTAGTCAAATGGAGCCTCAGTTGCAGTTGCTTAGAAATCATAAACCATAATGTTGCAGCTCAGATTGTAGTTGTAGACTTATTCGAAACCGTGTCTCATTTCAAAGCAGCTAAATTGCGGTAATGGGTCATCGTGGTCATTGATATCATTGATAATCATAGTTTAATGCGGTTTCAATCAATGTCGTGGAGAAATAAAAATACCCTATTGTTGCATCTTAGGCTTTAGTCCCAGATTTTTATGTAAAACTGTATCACTTCAAAGCAGCTAAATCCATTAATGAGCCATTAAATTTAAAATAATAGAGGGCAAATACTATTTGGCATACTCAATTAATTGACATGCTTAATGAATATTGGAGATTGGTAGGTAGATGTGGTCCTTACTATTTTCTCTGAATCATTGGTAAATTATGGCTTTTTAGCACTACTCTAAAATGTATTGTTGTTTCTCTCTAGCATTGAATGTGGTTGGGCACAAAATTAGGGTGATACACATTTAATGTTGCAGAGTTTTTTAAATATTACGCTTCTGTAAAACTTATGATTGTTTGATTTAGATCTATTTAAGGTTATTCAAGGACTATTTTATTTTTCGAATATCGGCATATGTGGGCCATTAACTACTTGTATAGATATGTGCACAAGAAGTTCAGTCAGCAATATAAAGCGACAATCGGTGCTGACTTTGTAACCAAAGAATTGCAGATCGATGACCGACTAGTTACTCTACAAGTGGGTTTTCTAGTTCATTGTTATTTCAGTATTATTTATTTTATTGTGTTTAAGATTATTATAATTATAATGTAAATTATGTATATTTTAATGATTTATGTGTATGTGTTGTGTTGTAGATATGGGACACTGCAGGGCAGGAGAGATTTCAAAGTCTTGGTGTTGCATTTTATAGAGGGGCCGATTGCTGTGTTCTCGTTTACGATGTTAATGTGATGAAGTCATTTGATACACTTGATAACTGGCACGAGGAGTTTCTGAAACAGGTTTACTATGTCTCCTCTATTTTTCTAATTTTGTTACTCTCGGTGATTTGCATGCTAACACTCTTTCAAATGTTGAGTCCAAATAAATTATAGGCTATACATATAAAAAAAATAGATTCCTTTGAGTGCGTTTGAGGTTTGTGAGACAAATTCTGAATATAAGCTGCTTTGAAATTATGTTGACAATGGAGAACCTCATTTCTTCATGTGTAGAGGATTAGTGTGATTACGGATTTTAAACTTGGCATTATACTTACTTATTGCAGCAGAAATTGATTTTGATTATTTCATATAGCTTTCATATGTTAATTATATATGTCATAACTCATGACCATGGTTTTGCTTTATAGCAACTTCTCCAATAGTTTGTTGAGACAATTGTTGCATCTGAATGTTTCTTGTGACGTTAAACAATAACATAAACATAGCTTAATTCTCCAGTATTTAGTTCTTACTTGTCTTGGACCTGTATTACCATCCAAGAGGAGGATTGGTTCTACATTTCCTCTTACAATGGTTATGAATGAATCATCGGAGAAAACAGTGAAGGAAACCAAATTGGATGAATAACCTAACAAACGAAATGGAAAACAGTGATGAACCACAGAGAAGGGTCAACTCCTTACTCTAGAACCCAGAAACCCACTCAGGAATTGCATAACTCCCCAATTCGTTGCCCCCCTCTAAATAAGTGTTACTGTTACTTCCCCCACATTACGTTTTATCCTCCCCCCACATTATTAATGTGCCTATAAATACTTCCCCCAACAAGTTTCACCTTGTCCTCAATGTTAATGATGACTAAATCCAATAAGCTAGCATGGTCCCACTGTTTGATATGGACTCTGCCCATTATTATTTCACCAAAGAATGCCTTTTGCTTATGGGCTGGACCAAAATCTTCCTGTCCAGCAGCATAATACAGAGAAACATCTGCCTTTCCAGCATCCTGACTCTATGCTAAACTGTACGTAGCCCATTAATACTATAACTTCATTTCATGGACAGCTTGGGCTTCCTCTACGTACAATTTGGTTGGACTAGTAATCAGACTCATTGCACTCTTAGAGACCAAGTTTTCTCATTGTTGGTGGTTTTGGCCCATTTGCTTTGGAACAGGGTCCAGTTGGTACCCATCAGATTTCACCATTGTATCTTTTTTCCATCATTCACTGGTTGCCTTAGTTAGCTTCCCTTTTTCCATTCTCTGCATGACAGCTTCTACCCGGCCGTTTTGCTAGTGGCTGAAGGGCCAGATTCTATATAAACCAAGGCCCTTGCTCTCTGCACAAGCTCTCAAGTGAAAATTAATGGCCTGTGCAAATCCTCGTAAATTTGACCTAGAGCTCTATGGCTATATTAAAGATAAGAAAATGATAGGGAATTTTCATATATTTATTGGTTCTCAAGATTGACCTTGATAGTTCAGATTAGCTGTTTGTACATTGGCTTATCCTTCACTTAGATTGATACTAACCTGCACTCACTTTAACTAACTCTGAACAATTTAAAACCGTCAGAAACTAACCAGTGCCTTGTAACACATTACATACTGTCAAGGCTTTACTGACTGGTGCCTATATCACCGAACAGGGTTTCAGTGCTTTGAGACAGCAGTACCGTAGTTTGCTGCTAGTTTTTGGGTTTTTACTAAGATTCTGTCTTTTTGTTGTTATTTAGCAAGTCTGGTGTCCTTTTCTCGTCTTCCTTGAATTTCTACGAAGTAAATTATATAACCTGCATCATGGATATTTTTGGTGTGAATGAAGCATTCAAATTCTTATTGAATCAAACATACCACAGTATGATTTGTTATGTAATTGAACTGCTATGGGTAGTAATTTTTCTGTTTGAAGTCATTTGAGCCCACCTGATGTTGAAGTTTGTGGAGCTGACAAATTTTATAATTTGTTTAGTGTGGATGCATACTTTTCCAGTTCATTAATTACCATTTTAATGTTGTGTCACAGGCAAACCCTTCTAATCCAAGCACTTTTCCATTTATATTGCTTGGAAACAAAGTTGATATTGATGGCGGGAATAGTCGAGTGGTAGGCAAATGCTATTGCAGTTATATAATTATTCATCTCCTGCTTAAGGGTCTAATTATGTTCTATACAGGTTTCTGATAAGAAAGCAAAGGAGTGGTGTGCCTCAAAAGGGAACATTCCTTACTTTGAGACATCTGCAAAGGAAGACTTGAATGTTGATGCTGCATTCCTACGTATTGCCAAGACCGCATTAGCCAATGAACGTGAGCAAGACATGTAAGATTTTAATTGTTTTAAATTTAAATTTTGATTATTTTTGTCCAAATATGTTTATTTCCTAGACATTTTTCTTTAGTGTCTATGATAGGACATTATGGTGGCGTTTGATCCATGTAGCTTGTAGCCGACTCCACTTAGTGGGAGAAGGCTTGGCTGTTGTTGTAGACGAATACTGAAATGTTGAATCATTATATGCATCGCACACCAGTTAGTAGTGTTGTGTAGTAGATAGAGTATAGGACCTCCTGGCTATCTTTTTATCTGTAATGTTTTTTATTTTTTTATTTTCCCTGAATACGTATAGCTATAAATCACATGGCTTCTTTGGCTCTTTGCCTGAGTCTTCTTGCCCAAAGGAAAAGATTGTAATTACAGATAATCATTGTTTCTGCTATTTTTGTGATAGACACAAAGTACTAATGTAGTTTTGCATTATTTTTAGGTTTTAGTTTTGGGAAAATGTGATTGTGCCTCTTAACATTTAGTCTGAACTTCTGTTGTAACTAACCAATTGTTTGCATAAACTATCTCTTGGCAAGAAGTGTTGTCTATCGAATTGTAACTTGTAACAAAGCTGCCAGTTAACATAGGGGACTCCCGCTTGGGACAGTAGTATTTAACATAGGGGGCTGCCAGTTATGGCTTTATGTAGCTGCCCATTTCTCACTACTTGTGAAAAAGTTGATTGGTGAAGCTGGTAGTTAACATAGGGGACTCCCACTTGGGACAGTAGGAAGAAGCACTTCAGAGTGAATGGCTCAGCTTCCACAGTTTGATTTTAAACTTTTCCCCATTAAATCTTATAAATTTGATCGTATGGTTTGATCTAATTCAATGATGTGGCATTTATTCATGTACTTACTTGATTTTCTTCCTTCTTTTGGGGCCTAGTCTCATTGACTTTTCGTTAGTAACCAACTCCAAATATCCCCCTTCAGTTAGGTTAGTTGGTCAGACATAGTTAGAAGAAATAAGACATGTCACCGAAAAATAAGAGTAGGGTTTTAGAATGAAAGGAAGAGGTGCCTAAGGATTTAAGAGGAAACTGAGGTCTTATGGGATGGTGCAGACACTCAGAAATCTCGGTAGTTGATTGCTGTGTTTTGTGCTGCGATTGAGCCGTTATGGGATTGCGGCACAGATCAGTTACTGGCCACCATGGCGAGGCAAGGACGTCATGCATGAAGGTGCAGGCGTGCAGTGAATAGCAAAATAATAATAGAAACTTATAGTAAAATATTTACTTGTATGTATTTAGTATAACATTATGTAGATATATAGTGAAATTATTTAGAATTAGATATAATTTATAAATCATTTATTGAAAGAGAGGCCATCCTGCTACATGTCATCCCGGCTGTTGTCCGGGTTGTCTGGGATTGACAACTATGTTGAATATTTGTTGTGTTTCATTCCATAATTAGGGTAGAGATTATTATTTCTAATAAAATACCATGTTATACTGTCACCTTTCTTTGTATCAGATATGAGATTTTAACAGATGCTTGCTTAACTGACTTCTGAATTCAATATTTCATTATGCCTTGCAGATATTTTCAACCTATTCCGGAGCCTGTTGTTCCAGAGAATGAGCAGAGGGGTGGTTGTGCATGTTGA
Protein sequence

>MS.gene08038.t1

MALRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFILLGNKVDIDGGNSRVVSDKKAKEWCASKGNIPYFETSAKEDLNVDAAFLRIAKTALANEREQDIYFQPIPEPVVPENEQRGGCAC